RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR01193

>gnl|CDD|130261 TIGR01193, bacteriocin_ABC, ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc. Length = 708
 Score = 81.3 bits (201), Expect = 4e-16
 Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 30/233 (12%)

Query: 12  LEIQDICQSFSLKKISGNLLVLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSS 71
           + I D+  S+          +L  ++  +       ++G SGSGKSTL +++ G     S
Sbjct: 474 IVINDVSYSYGY-----GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARS 528

Query: 72  GQVLFKGKKIKDPPKD-----ISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRKRAL 126
           G++L  G  +KD  +      I+ + Q   +F   ++LEN+ LG K      ++    A 
Sbjct: 529 GEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAKENV--SQDEIWAAC 585

Query: 127 SAIDL--------IGLDGFESAHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVL 178
              ++        +G     S   + ISGG  QR+  ARA +    +L++DE  S LD +
Sbjct: 586 EIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTI 645

Query: 179 TAENLRTDLIDLWIEGRLPIESMLMVTHNIEEAVLMCDRVLVFSSNPGRIAEE 231
           T + +  +L++      L  ++++ V H +  A    D+++V     G+I E+
Sbjct: 646 TEKKIVNNLLN------LQDKTIIFVAHRLSVAK-QSDKIIVLDH--GKIIEQ 689