RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR01257
>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
Score = 90.1 bits (223), Expect = 9e-19
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 17/203 (8%)
Query: 33 LDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKKIKDPPKDISVVF 92
+D++N +I LG +G+GK+T L I+ GL+ P+SG VL GK I+ ++ V
Sbjct: 946 VDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIE---TNLDAVR 1002
Query: 93 QTFA-------LFPWLTVLENVELGLKAKGIDKEERRKRALSAIDLIGLDGFESAHTTEI 145
Q+ LF LTV E++ + KG EE + + ++ GL + ++
Sbjct: 1003 QSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDL 1062
Query: 146 SGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDLWIEGRLPIESMLMVT 205
SGGM +++ A AFV ++++DEP S +D + ++ DL+ + GR +++M T
Sbjct: 1063 SGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSI-WDLLLKYRSGR----TIIMST 1117
Query: 206 HNIEEAVLMCDRVLVFSSNPGRI 228
H+++EA L+ DR+ + S GR+
Sbjct: 1118 HHMDEADLLGDRIAIISQ--GRL 1138