RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR01257
>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
Score = 75.0 bits (184), Expect = 3e-14
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 33 LDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKKIKDPPKDISVVF 92
+D++ V GE GLLG +G+GK+T +++ G + +SG GK I +IS V
Sbjct: 1955 VDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSIL---TNISDVH 2011
Query: 93 QTFALFP-------WLTVLENVELGLKAKGIDKEERRKRALSAIDLIGLDGFESAHTTEI 145
Q P LT E++ L + +G+ EE K A +I +GL +
Sbjct: 2012 QNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTY 2071
Query: 146 SGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDLWIEGRLPIESMLMVT 205
SGG +++ A A + P L+L+DEP + +D L ++ + EGR ++++ +
Sbjct: 2072 SGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGR----AVVLTS 2127
Query: 206 HNIEEAVLMCDRVLV 220
H++EE +C R+ +
Sbjct: 2128 HSMEECEALCTRLAI 2142