RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR03415
>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382
Score = 170 bits (433), Expect = 6e-43
Identities = 87/215 (40%), Positives = 129/215 (60%), Gaps = 18/215 (8%)
Query: 27 SGNLLVLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFK-GKKIKDP- 84
+G ++ + + ++ GEI L+G SGSGKS+LLR + GL S G VL K G D
Sbjct: 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVA 93
Query: 85 -----------PKDISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRKRALSAIDLIG 133
+S+VFQ FAL PWLTV ENV GL+ +G+ + ERRKR ++L+G
Sbjct: 94 NCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVG 153
Query: 134 LDGFESAHTTEISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDLWIE 193
L + E+SGGM QRVG ARAF + +LLMDEPFSALD L L+ +L++L +
Sbjct: 154 LAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLEL--Q 211
Query: 194 GRLPIESMLMVTHNIEEAVLMCDRVLVFSSNPGRI 228
+L ++++ V+H+++EA+ + +R+ + GRI
Sbjct: 212 AKLN-KTIIFVSHDLDEALKIGNRIAIMEG--GRI 243