RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score = 84.7 bits (210), Expect = 4e-17
 Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 39/229 (17%)

Query: 28  GNLLVLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKKIK--DPP 85
           G    L  ++F + +GE + ++G SGSGKSTL R+I G+  P+SG V   G  +K  D  
Sbjct: 329 GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRE 388

Query: 86  ---KDISVVFQTFALFPWLTVLENVELGLKAKGIDKEERRK-----RALSAIDLIGLDGF 137
              K I  + Q   LFP  TV EN+     A+  +  +  K     +     +LI     
Sbjct: 389 TFGKHIGYLPQDVELFPG-TVAENI-----ARFGENADPEKIIEAAKLAGVHELIL--RL 440

Query: 138 ESAHTTEI-------SGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTAENLRTDLIDL 190
              + T I       SGG  QR+  ARA    P L+++DEP S LD    + L   +  L
Sbjct: 441 PDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKAL 500

Query: 191 WIEGRLPIESMLMVTHNIEEAVLMC-DRVLVFSSNPGRIA-----EEVL 233
              G     +++++TH    ++L C D++LV     GRIA     +EVL
Sbjct: 501 KARGI----TVVVITHRP--SLLGCVDKILVL--QDGRIARFGERDEVL 541