RPSBLAST alignment for GI: 254780596 and conserved domain: TIGR03796
>gnl|CDD|163508 TIGR03796, NHPM_micro_ABC1, NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin. Length = 710
Score = 91.5 bits (228), Expect = 3e-19
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 29/174 (16%)
Query: 32 VLDKVNFNVSSGEIVGLLGRSGSGKSTLLRIIAGLVSPSSGQVLFKGKKIKDPPKDI--- 88
+++ + + G+ V L+G SGSGKST+ +++AGL P SG++LF G ++ P+++
Sbjct: 494 LIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLAN 553
Query: 89 --SVVFQTFALFPWLTVLENVELGLKAKGIDK---EERRKRAL--SAI-DLIGL--DGFE 138
++V Q LF TV +N+ L D + RA +AI D+I G++
Sbjct: 554 SVAMVDQDIFLFEG-TVRDNLTL------WDPTIPDADLVRACKDAAIHDVITSRPGGYD 606
Query: 139 SAHTTE----ISGGMLQRVGFARAFVVFPSLLLMDEPFSALDVLTA----ENLR 184
A E +SGG QR+ ARA V PS+L++DE SALD T +NLR
Sbjct: 607 -AELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLR 659