HHsearch alignment for GI: 254780598 and conserved domain: COG3713
>COG3713 OmpV Outer membrane protein V [Cell envelope biogenesis, outer membrane].
Probab=95.22 E-value=0.15 Score=25.73 Aligned_cols=80 Identities=14% Similarity=-0.024 Sum_probs=51.8
Q ss_pred EEEECCCEEEEEEEEEEEEEEEECCCCC-------------CCC--CCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCC
Q ss_conf 5431276778988544776444313455-------------567--7520479973466100488679999999975056
Q gi|254780598|r 125 GYEVSDSLLLYATVGPDVAQKYETGKAG-------------EIT--PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 (205)
Q Consensus 125 Gy~~~~~~l~Y~~~G~a~~~~~~~~~~~-------------~~~--~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~ 189 (205)
T Consensus 156 ~~~~~~~~~ispg~g~s~~s~~Y~~yYfGVs~~esa~Sgl~~Y~p~~g~~s~~l~ls~~y-~~t~~w~~~~~~~~~RL~g 234 (258)
T COG3713 156 PRMLIGRLSLSPGPGVSWASSKYNDYYFGVSAAESARSGLASYNPGGGAKSPGLGLSATY-MITDHWSVGGTAGYSRLSG 234 (258)
T ss_pred EEECCCCEEECCCCCEEEECCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEE-EECCCEEEEEEEEEEECCC
T ss_conf 983059789854773277122334202052889973047774079988434672379999-7068779998887131033
Q ss_pred C--------CCCCEEEEEEEEEEC
Q ss_conf 5--------566226999998539
Q gi|254780598|r 190 V--------EGFYNTISLGVGMKF 205 (205)
Q Consensus 190 ~--------~~~~~~~~~G~~ykF 205 (205)
T Consensus 235 daadSPiV~~~~q~~~~~~v~YrF 258 (258)
T COG3713 235 DAADSPIVDRRNQFSVGTGVTYRF 258 (258)
T ss_pred CCCCCCCEECCCCEEEEEEEEEEC
T ss_conf 101497466156358998899859