HHsearch alignment for GI: 254780598 and conserved domain: PRK10808
>PRK10808 outer membrane protein A; Reviewed.
Probab=100.00 E-value=6.1e-32 Score=181.87 Aligned_cols=173 Identities=23% Similarity=0.322 Sum_probs=126.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCC
Q ss_conf 9443789999999998410000246654356666655563455444444115421000122333344--------66777
Q gi|254780598|r 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS--------FGEEA 72 (205)
Q Consensus 1 Mkk~~la~av~~lal~~~~~A~Aad~~~~~~~~~~~~~~~~~~~~~~~~~~~w~G~y~g~~~g~~~~--------~~~~~ 72 (205)
T Consensus 1 MKKt~ial~va~a~~a--~~A~Aa~~---------------dn~-----------wY~G~k~G~s~~~d~~~~~~~~~~d 52 (347)
T PRK10808 1 MKKTAIAIAVALAGFA--TVAQAAPK---------------DNT-----------WYTGAKLGWSQYHDTGFINNNGPTH 52 (347)
T ss_pred CCHHHHHHHHHHHHHH--HHHHCCCC---------------CCC-----------EEEEEEEEEEEECCCCCCCCCCCCC
T ss_conf 9467999999999777--64312000---------------288-----------7896421100121331246677765
Q ss_pred CCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCC---CCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEECC
Q ss_conf 7760268998546404837998451013215556---6662122321489998975431276778988544776444313
Q gi|254780598|r 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL---ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG 149 (205)
Q Consensus 73 ~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~~~---~~~~~~~~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~ 149 (205)
T Consensus 53 ~~~~g~G~f~GYqfn~---~~a~E~GYd~lG~~~~~g~~~~~~~~~~g~~La~k~~ypl~d~l~ly~k~G~~y~~~d~~~ 129 (347)
T PRK10808 53 KNQLGAGAFGGYQVNP---YLGFEMGYDWLGRMPYKGDVSNGAFKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKS 129 (347)
T ss_pred CCCCEEEEEEEEEECC---EEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEECCCC
T ss_conf 5661245675477254---4889870000285432454447640146788888881045677232578534899712344
Q ss_pred CC-----CCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEE-CCCC-----CCCCEEEEEEEEEEC
Q ss_conf 45-----55677520479973466100488679999999975-0565-----566226999998539
Q gi|254780598|r 150 KA-----GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK-YSKV-----EGFYNTISLGVGMKF 205 (205)
Q Consensus 150 ~~-----~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~d-f~~~-----~~~~~~~~~G~~ykF 205 (205)
T Consensus 130 ~~~~~~~~~~~d~g~s~~~g~GveY-~lt~~~~~R~eYq~~~~igd~~~~g~~~d~~~~slGlsY~F 195 (347)
T PRK10808 130 NVTGGARGKDHDTGVSPVFAGGVEY-AITPEWATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 195 (347)
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEEE-EECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECC
T ss_conf 5566543235656736206720358-80637268888999810575555574677756999999637