HHsearch alignment for GI: 254780598 and conserved domain: pfam01389
>pfam01389 OmpA_membrane OmpA-like transmembrane domain. The structure of OmpA transmembrane domain shows that it consists of an eight stranded beta barrel. This family includes some other distantly related outer membrane proteins with low scores.
Probab=94.78 E-value=0.2 Score=25.06 Aligned_cols=89 Identities=17% Similarity=0.089 Sum_probs=38.5
Q ss_pred CCEEEEEEEEEEECCCCC-CCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEEE-EEEECCCCCCCCCCCEEEEEEEE
Q ss_conf 837998451013215556-6662122321489998975431276778988544776-44431345556775204799734
Q gi|254780598|r 89 SCIMYGVEGDVRYTVPVL-ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA-QKYETGKAGEITPIAIGGTAGVG 166 (205)
Q Consensus 89 ~~~V~G~e~d~~~~~~~~-~~~~~~~~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~-~~~~~~~~~~~~~~~~g~~~G~G 166 (205)
T Consensus 5 n~~Y~G~~~G~s~~~~~~~~~~~~~~d~~~~~~glf~GYqfn~~~a~E--~gY~~lG~~~~~~~~~~~~~~~~~~~l~~k 82 (175)
T pfam01389 5 NTWYTGAKAGWASFHDTGLIEGNGPTHRNSLTAGAFGGYQINNYLAAE--LGYDYLGRMPYKGKGKNNAHKAQGVTLSLK 82 (175)
T ss_pred CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEE--EEEEECCCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 957896640256895763445787656787178999863103112268--742431654335534345404689999999
Q ss_pred EEEECCCCCEEEEE
Q ss_conf 66100488679999
Q gi|254780598|r 167 VEVGGLSESLVARL 180 (205)
Q Consensus 167 vey~~it~~~~~r~ 180 (205)
T Consensus 83 ~~~-pl~d~~~ly~ 95 (175)
T pfam01389 83 LSY-PLTDDLDVYG 95 (175)
T ss_pred EEE-EECCCEEEEE
T ss_conf 888-6148567999