HHsearch alignment for GI: 254780598 and conserved domain: pfam02462

>pfam02462 Opacity Opacity family porin protein. Pathogenic Neisseria spp. possess a repertoire of phase-variable Opacity proteins that mediate various pathogen--host cell interactions. These proteins are integral membrane proteins related to other porins.

Probab=99.34  E-value=1.2e-11  Score=77.58  Aligned_cols=115  Identities=22%  Similarity=0.186  Sum_probs=81.0

Q ss_pred             EEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEE--EECCCEEEEEEEEEEEEEEEECC-----CCCCCC
Q ss_conf             54640483799845101321555666621223214899989754--31276778988544776444313-----455567
Q gi|254780598|r   83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY--EVSDSLLLYATVGPDVAQKYETG-----KAGEIT  155 (205)
Q Consensus        83 GYn~q~~~~V~G~e~d~~~~~~~~~~~~~~~~~~~~~~~~r~Gy--~~~~~~l~Y~~~G~a~~~~~~~~-----~~~~~~  155 (205)
T Consensus         2 GYdfg--~~R~--A~DY~~y~k~~~~~~~~~-~--~SlglsaiYDFdt~s~~kPYvGarv~~~~~~~~~~~~~~~~~s~S   74 (126)
T pfam02462         2 GYRFG--NLRF--AVDYTRYGKVKANSTDFK-G--YSLGASVIYDFDTQSPVKPYVGARVSTNGFKVTASAELGGSDSFS   74 (126)
T ss_pred             CCCCC--CEEE--EECHHHHCCCCCCCCCEE-E--EEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             61358--7999--820123152137875357-6--763678999715899521426756761222103555358755650


Q ss_pred             CCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCC---CCCCEEEEEEEEEEC
Q ss_conf             75204799734661004886799999999750565---566226999998539
Q gi|254780598|r  156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV---EGFYNTISLGVGMKF  205 (205)
Q Consensus       156 ~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~---~~~~~~~~~G~~ykF  205 (205)
T Consensus        75 ~~~~g~gv~AGVgy-ditpnltLD~GYRY~~~G~le~tr~~theas~GvRY~F  126 (126)
T pfam02462        75 DTRIGLGVLAGVSY-KLTPNVDLDTGYRYNRLGKVTVTNVRSGEASAGVRYKF  126 (126)
T ss_pred             CCEEEEEEEEEEEE-ECCCCEEEECCEEEEECCCCCCCEECCCCEEEEEEEEC
T ss_conf             33599988743688-32787377125288004641343020121368866639