HHsearch alignment of GI: 254780598 and MMDB domain: 2f1v_A_

>2f1v_A (A:) Outer membrane protein W; outer membrane protein beta barrel; 2.70A {Escherichia coli K12} PDB: 2f1t_A
Probab=99.85  E-value=4.3e-20  Score=120.66  Aligned_cols=150  Identities=13%  Similarity=0.036  Sum_probs=105.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-----------CCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCC---CCCCC----
Q ss_conf             154210001223333446677-----------777602689985464048379984510132155566---66212----
Q gi|254780598|r   51 HDFNGPYAGLSALYNGSFGEE-----------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA---DNIHS----  112 (205)
Q Consensus        51 ~~w~G~y~g~~~g~~~~~~~~-----------~~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~~~~---~~~~~----  112 (205)
                      ++|+++|+++++|+.....+.           .++++.+++.+||+++..   +.+|+++.+......   .....    
T Consensus         1 ~~~~g~Yig~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gy~~~~~---~~ve~~~~~~~~~~~~~~~~~~~~~~~   77 (197)
T 2f1v_A            1 HEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDN---IGVELLAATPFRHKIGTRATGDIATVH   77 (197)
T ss_dssp             -CTTCEEEEEEEEEEECCCC---------CCEECCEEEEEEEEEEESSSS---EEEEEEEESCEEEEEEETTTEEEEEEE
T ss_pred             CCCCCEEEEECEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEECC---CEEEEEEEEEEEEEECCCCCCCCCCEE
T ss_conf             97778899946699886467886436766348678748868999995067---215667656100010124777522045


Q ss_pred             CCCEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEECCC---------CCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf             23214899989754312767789885447764443134---------555677520479973466100488679999999
Q gi|254780598|r  113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK---------AGEITPIAIGGTAGVGVEVGGLSESLVARLEYR  183 (205)
Q Consensus       113 ~~~~~~~~~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~~---------~~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~  183 (205)
                      ........+-+... ..+++.||+.+|+.+.+.+.+..         ....+++.+++.+|+|++| .|+++|++++|||
T Consensus        78 ~~~~~~~~~y~~~~-~~~~~~py~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~y-~l~~~~~l~~eyr  155 (197)
T 2f1v_A           78 HLPPTLMAQWYFGD-ASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDY-LINRDWLVNMSVW  155 (197)
T ss_dssp             EECCEEEEEEECSC-TTCSEEEEEEEEEEEEEEEEEEECHHHHHTTEEEEEECCEEEEEEEEEEEE-ECSSSEEEEEEEE
T ss_pred             EECCEEEEEEEECC-CCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEE-ECCCCEEEEEEEE
T ss_conf             50424889998617-777588999732177899600015677654221244566383899734899-9079839999999


Q ss_pred             EEECCC--------------CCCCCEEEEEEEEEEC
Q ss_conf             975056--------------5566226999998539
Q gi|254780598|r  184 ASKYSK--------------VEGFYNTISLGVGMKF  205 (205)
Q Consensus       184 y~df~~--------------~~~~~~~~~~G~~ykF  205 (205)
                      |.++.+              ++.+.+.+++|+.|||
T Consensus       156 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~Y~F  191 (197)
T 2f1v_A          156 YMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF  191 (197)
T ss_dssp             EECCEEEEEEEESSCCCCEEEECCCEEEEEEEEEEE
T ss_pred             EEECCCCEEEECCCCCCCEEEEECCEEEEEEEEEEE
T ss_conf             997455157842886311048727138999999996