HHsearch results for GI: 254780598 and protein with PDBid: 1p4t_A

>1p4t_A Outer membrane protein NSPA; beta barrel; HET: CXE; 2.55A {Neisseria meningitidis} SCOP: f.4.1.1
Probab=99.91  E-value=1.3e-23  Score=137.92  Aligned_cols=147  Identities=16%  Similarity=0.097  Sum_probs=112.2

Q ss_pred             CCCCCCCCCCCCCCCCCC-CCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCC
Q ss_conf             421000122333344667-7777602689985464048379984510132155566662122321489998975431276
Q gi|254780598|r   53 FNGPYAGLSALYNGSFGE-EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS  131 (205)
Q Consensus        53 w~G~y~g~~~g~~~~~~~-~~~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~~~~~~~~~~~~~~~~~~~r~Gy~~~~~  131 (205)
                      -+|||++.++++.....+ .+.+++.+++.+||+++  +|  .+|+++.+...........+ .+...+.++..++..++
T Consensus         3 ~~Gfyv~~~~g~~~~~~~~~~~~g~~~~~~~GY~f~--~~--~~e~~y~~~~~~~~~~~~~~-~~~~~l~~~y~~~~~~~   77 (155)
T 1p4t_A            3 ASGFYVQADAAHAKASSSLGSAKGFSPRISAGYRIN--DL--RFAVDYTRYKNYKAPSTDFK-LYSIGASAIYDFDTQSP   77 (155)
T ss_dssp             CEEEEEEEEEEEEEEECSSCEEEEECCEEEEEEEET--TE--EEEEEEEEEEESSCCSSCCE-EEEEEEEEEEECCCSSS
T ss_pred             CCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECC--CE--EEEEEEEEECCCCCCCCCEE-EEEEEEEEEEEECCCCC
T ss_conf             743389687547024467787885768999999827--99--99999998245567886357-89999999998436775


Q ss_pred             EEEEEEEEEEEEEEEECCC-CCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCC----CCCEEEEEEEEEEC
Q ss_conf             7789885447764443134-55567752047997346610048867999999997505655----66226999998539
Q gi|254780598|r  132 LLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----GFYNTISLGVGMKF  205 (205)
Q Consensus       132 ~l~Y~~~G~a~~~~~~~~~-~~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~~----~~~~~~~~G~~ykF  205 (205)
                      +.||+++|+++++.+.... ....+++..+|.+|+|++| .|+|+|++++||||+++++++    .+.|++++|+.|||
T Consensus        78 ~~py~~~G~g~~~~~~~~~~~~~~~~~~~~~~~g~G~~y-~~~~~~~~~~ey~y~~~~~~~~~~~~~~~~~~~Gl~Y~F  155 (155)
T 1p4t_A           78 VKPYLGARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSY-AVTPNVDLDAGYRYNYIGKVNTVKNVRSGELSAGVRVKF  155 (155)
T ss_dssp             EEEEEEEEEEEEEEEEEETTEEEECCCEEEEEEEEEEEE-EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEC
T ss_pred             EEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEE-EECCCEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEC
T ss_conf             779999657899987143330014785060475114999-717899999999998767876674300369999999999