HHsearch results for GI: 254780598 and protein with PDBid: 1uyn_X

>1uyn_X NALP; autotransporter, translocator domain, membrane protein, outer membrane, beta-domain, beta-barrel; HET: CXE; 2.6A {Neisseria meningitidis} SCOP: f.4.5.1 PDB: 1uyo_X*

Probab=95.67  E-value=0.062  Score=26.57  Aligned_cols=71  Identities=18%  Similarity=0.130  Sum_probs=31.9

Q ss_pred             EEEEEEEEEEEEE--CCCE--EEEEEEEEEEEEEEE---CC---CCCCCCC--CCEEEEEEEEEEEECCCCC--EEEEEE
Q ss_conf             1489998975431--2767--789885447764443---13---4555677--5204799734661004886--799999
Q gi|254780598|r  116 IGGSLRIRGGYEV--SDSL--LLYATVGPDVAQKYE---TG---KAGEITP--IAIGGTAGVGVEVGGLSES--LVARLE  181 (205)
Q Consensus       116 ~~~~~~~r~Gy~~--~~~~--l~Y~~~G~a~~~~~~---~~---~~~~~~~--~~~g~~~G~Gvey~~it~~--~~~r~E  181 (205)
                      ....+.+++||.+  .+++  .||+.+-|.+.+.+.   ++   ....++.  ......+|+-+++ .+..+  +..+++
T Consensus       153 ~~~~~~~~~gy~~~~~~~~~l~P~~gl~y~~~~~~~f~E~g~~~~l~~~~~~~~~~~~~~Glr~~~-~~~~~~~~~~~~~  231 (308)
T 1uyn_X          153 TLMQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGLKLSQ-PLSDKAVLFATAG  231 (308)
T ss_dssp             EEEEEEEEEEECCC---CCEEEEEEEEEEEEEEECCEEEESCTTCCEECCEEEEEEEEEEEEEEEE-ECSSSEEEEEEEE
T ss_pred             CEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEECCCEEEECCCCEEEECCCCCEEEEEEEEEEEEE-ECCCCEEEEEEEE
T ss_conf             169999998777882696389799998999972366045077400487167401668999999998-5477168988878


Q ss_pred             EEEEECC
Q ss_conf             9997505
Q gi|254780598|r  182 YRASKYS  188 (205)
Q Consensus       182 Y~y~df~  188 (205)
                      |+| +|+
T Consensus       232 ~~~-~~~  237 (308)
T 1uyn_X          232 VER-DLN  237 (308)
T ss_dssp             EEE-ESS
T ss_pred             EEE-ECC
T ss_conf             997-527