HHsearch results for GI: 254780598 and protein with PDBid: 2j1n_A
>2j1n_A Outer membrane protein C; beta-barrel, ION transport, non-specific porin, general porin, osmoporin, transmembrane transport; HET: D12; 2.0A {Escherichia coli} PDB: 2j4u_P 2zle_D 2ixx_A* 2xe1_A* 2xe2_A* 2ixw_A* 2xe5_A* 2xe3_A* 2xg6_A 1osm_A*
Probab=98.19 E-value=0.00014 Score=40.15 Aligned_cols=80 Identities=14% Similarity=0.149 Sum_probs=48.8
Q ss_pred EEEEEEEECCCEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCC-------CC
Q ss_conf 98975431276778988544776444313455567752047997346610048867999999997505655-------66
Q gi|254780598|r 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE-------GF 193 (205)
Q Consensus 121 ~~r~Gy~~~~~~l~Y~~~G~a~~~~~~~~~~~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~~-------~~ 193 (205)
..-+.|.+.+.+.+++ ++.+.+.+........++. --.+-+|++| .++++..+-+||++.+..+.. .+
T Consensus 260 ~~~~~Y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~vG~~Y-~lsKrt~~Y~~y~~~~~~~~~~~~~~~~~~ 334 (346)
T 2j1n_A 260 EAVAQYQFDFGLRPSL--AYLQSKGKNLGRGYDDEDI--LKYVDVGATY-YFNKNMSTYVDYKINLLDDNQFTRDAGINT 334 (346)
T ss_dssp EEEEEECCTTSEEEEE--EEEEEEEESCSTTCCSEEE--EEEEEEEEEE-ESSSSEEEEEEEEEECCCCCHHHHHHTCCC
T ss_pred EEEEEEEECCCEEEEE--EEEEEECCCCCCCCCCCCC--EEEEEEEEEE-EECCCEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 9999999867648999--9999963434567787650--6999999999-936998999999975356632123468766
Q ss_pred CEEEEEEEEEEC
Q ss_conf 226999998539
Q gi|254780598|r 194 YNTISLGVGMKF 205 (205)
Q Consensus 194 ~~~~~~G~~ykF 205 (205)
.+.|.||+-|+|
T Consensus 335 ~~~~~vGlr~~F 346 (346)
T 2j1n_A 335 DNIVALGLVYQF 346 (346)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEEEEEC
T ss_conf 778999999989