HHSEARCH alignment of GI: 254780598 and SCOP domain: d1osma_

Alignment

Probab=97.99  E-value=0.00022  Score=37.97  Aligned_cols=43  Identities=14%  Similarity=0.312  Sum_probs=34.8

Q ss_pred             EEEEEEEEECCCCCEEEEEEEEEEECCCCC-------CCCEEEEEEEEEEC
Q ss_conf             997346610048867999999997505655-------66226999998539
Q gi|254780598|r  162 TAGVGVEVGGLSESLVARLEYRASKYSKVE-------GFYNTISLGVGMKF  205 (205)
Q Consensus       162 ~~G~Gvey~~it~~~~~r~EY~y~df~~~~-------~~~~~~~~G~~ykF  205 (205)
                      .+-+|++| .|+++..+-+||++.+..+.+       .+.+.|.|||-|+|
T Consensus       293 ~~~~G~~Y-~lsKrt~~Y~~y~~~~~~~~~~~~~~~~~~~~~~~~G~r~~F  342 (342)
T d1osma_         293 YVDVGATY-YFNKNMSTYVDYKINLLDDNSFTRSAGISTDDVVALGLVYQF  342 (342)
T ss_dssp             EEEEEEEE-EEETTEEEEEEEEEECCCCCHHHHHHTCCCSCEEEEEEEEEC
T ss_pred             EEEEEEEE-EECCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEC
T ss_conf             99999999-965898999999998156743234467666778999999989

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: Porins
family: Porin
domain: Porin
species: Klebsiella pneumoniae [TaxId: 573]