HHSEARCH alignment of GI: 254780598 and SCOP domain: d1qj8a_

Alignment
>d1qj8a_ f.4.1.1 (A:) Outer membrane protein X (OMPX) {Escherichia coli [TaxId: 562]}
Probab=99.96  E-value=4.4e-29  Score=164.85  Aligned_cols=141  Identities=21%  Similarity=0.231  Sum_probs=113.3

Q ss_pred             CCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCC-CCCCCCCEEEEEEEEEEEEECCCEEEEEEEE
Q ss_conf             233334466777776026899854640483799845101321555666-6212232148999897543127677898854
Q gi|254780598|r   61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIRGGYEVSDSLLLYATVG  139 (205)
Q Consensus        61 ~~g~~~~~~~~~~~~~~~G~~~GYn~q~~~~V~G~e~d~~~~~~~~~~-~~~~~~~~~~~~~~r~Gy~~~~~~l~Y~~~G  139 (205)
                      ..||+..+.+ ..++...|+.+||+||+.++++|+|+++.+.+.+... ..........++.+|..|++++++++|+++|
T Consensus         6 ~~Gy~~~d~~-~~~~~~~G~~lgy~y~~~n~~~gvE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G   84 (148)
T d1qj8a_           6 TGGYAQSDAQ-GQMNKMGGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVG   84 (148)
T ss_dssp             EEEEEEEEET-TTEEEEEEEEEEEEEECTTCSEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEECCC-CCCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEEEE
T ss_conf             9478962356-778861149999828917917999999998856783046631101588999888897477454989867


Q ss_pred             EEEEEEEECCC-CCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEC
Q ss_conf             47764443134-5556775204799734661004886799999999750565566226999998539
Q gi|254780598|r  140 PDVAQKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF  205 (205)
Q Consensus       140 ~a~~~~~~~~~-~~~~~~~~~g~~~G~Gvey~~it~~~~~r~EY~y~df~~~~~~~~~~~~G~~ykF  205 (205)
                      +++.+.+.+.. ..+.+++..+|.+|+|+|| +|++||++|+||||+++++.+  .|++++|++|||
T Consensus        85 ~a~~~~~~~~~~~~~~~~~~~g~~~G~Gvey-~l~~n~~~~~eY~~~~~~~~d--~~~~~~Gv~YrF  148 (148)
T d1qj8a_          85 VGYGKFQTTEYPTYKNDTSDYGFSYGAGLQF-NPMENVALDFSYEQSRIRSVD--VGTWIAGVGYRF  148 (148)
T ss_dssp             EEEEEEEEEETTTEEEEEEEEEEEEEEEEEE-CSSTTEEEEEEEEEEEETTEE--EEEEEEEEEEEC
T ss_pred             EEEEEEEECCCCCCCCCCCCCCEEEEEEEEE-EECCCEEEEEEEEEEECCCCE--EEEEEEEEEEEC
T ss_conf             7899998413787655645444469621799-806887999999997479943--306999989889


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: OMPA-like
family: Outer membrane protein
domain: Outer membrane protein X (OMPX)
species: Escherichia coli [TaxId: 562]