BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780598|ref|YP_003065011.1| outer membrane protein
[Candidatus Liberibacter asiaticus str. psy62]
(205 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780598|ref|YP_003065011.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040275|gb|ACT57071.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 205
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL
Sbjct: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL
Sbjct: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL
Sbjct: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
Query: 181 EYRASKYSKVEGFYNTISLGVGMKF 205
EYRASKYSKVEGFYNTISLGVGMKF
Sbjct: 181 EYRASKYSKVEGFYNTISLGVGMKF 205
>gi|315121798|ref|YP_004062287.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495200|gb|ADR51799.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 231
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 132/232 (56%), Gaps = 28/232 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAAD----PVRRAHHG-GRGVVPTIAT-NRYVPIRHDFN 54
M+K FLAVGVS+L L SF + QAAD P RR H RGVVPT+ + NRYV +
Sbjct: 1 MKKFFLAVGVSTLTLVSFSAVQAADAVQRPQRRQHASVSRGVVPTVVSANRYVYSQQGIE 60
Query: 55 GPYAGLSALYNGSF-GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD----- 108
GPYAG+S + +F G++ + + GGS+FAGYNV++ YG E D RY+ + +
Sbjct: 61 GPYAGMSIFHERNFSGKDHNKDIGGSLFAGYNVQEGDFFYGAEADARYSHDIASKEHKAA 120
Query: 109 -----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
++ GSLR RGGYE++ +++Y TVG K A
Sbjct: 121 RLDQKDDAAVSKMYHAADFSGSLRFRGGYEIAAPVVVYGTVGVAAVHKASKAPADAAASP 180
Query: 158 A----IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
A IGGTAG+GVE L ++++ R+EYRA+KYS V N +SLG+G++F
Sbjct: 181 AKAFYIGGTAGLGVE-SVLVDNIIGRVEYRATKYSGVSHLQNVVSLGLGIRF 231
>gi|190891163|ref|YP_001977705.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190696442|gb|ACE90527.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 211
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 26/221 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58
M+ L + S+ A+A AQAAD V + VP + P++ ++ G Y
Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQ--------VPEAPVAQDAPVKPAGNWEGFYL 52
Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115
G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GS+R R GY++ + LLY T G + + + + A G T G GVE ++ +
Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNN 170
Query: 176 LVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205
+ RLEYR + Y + G+ N++ LG+G+KF
Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor
gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248]
Length = 211
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58
M+ L + S A+A +AQAAD V + VP + P++ + G Y
Sbjct: 1 MRVLIAGLMASVFAIAGVSAAQAADRVDQ--------VPEAPVAQEAPVKPAGSWEGFYL 52
Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115
G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYG 112
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GS+R R GY++ + LLY T G + + + + G T G GVE ++ +
Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNN 170
Query: 176 LVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205
+ RLEYR + Y + G+ N++ LG+G+KF
Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|327193361|gb|EGE60264.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 211
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 26/221 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58
M+ L + S+ A+A AQAAD V + VP + P++ ++ G Y
Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQ--------VPEAPVAQDAPVKPAGNWEGFYL 52
Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115
G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GS+R R GY++ + LLY T G + + + + G T G GVE ++ +
Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTNYGYTVGAGVEA-FVTNN 170
Query: 176 LVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205
+ RLEYR + Y + G+ N++ LG+G+KF
Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|110634323|ref|YP_674531.1| OmpA-like transmembrane region [Mesorhizobium sp. BNC1]
gi|110285307|gb|ABG63366.1| OmpA-like transmembrane region [Chelativorans sp. BNC1]
Length = 216
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 53 FNGPYAGLSALY--------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-V 103
+ GPYAG++ Y +G+ GE G++F G+ + +YGVEGD+ Y +
Sbjct: 50 WAGPYAGIALGYGFSGEVSADGAPGEVETDGFVGNVFGGWQGQSGQFVYGVEGDIGYNGM 109
Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163
+ HG+ GSLR R GY +D++LLYAT G ++ +G + A+G TA
Sbjct: 110 EGSEGGVDVEHGVDGSLRARLGYAATDNVLLYATGGGAASRLEASGGGLTESETAVGWTA 169
Query: 164 GVGVEVGGLSESLVARLEYRASKYS------KVEGFYNTISLGVGMKF 205
G GV+V L+ ARLEYR + S V+ N + LGVGM+F
Sbjct: 170 GAGVDV-KLTPKSFARLEYRYTDLSAEFDSVDVDTTSNKVMLGVGMQF 216
>gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 210
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + VS+ A+ F +A AAD V + P +A P ++++G Y G
Sbjct: 1 MRTLIKTLMVSAFAIGGFNAAYAADAVEQIPQ------PPVA-QEAAPAINNWSGFYIGG 53
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIG 117
+ +N G F + + GG F GYN + I+YGVE D+ Y + + + + +G+
Sbjct: 54 AGDWNKGHFSRNGNGYGFGGEAFTGYNWQQGQIVYGVEADLGYAGIDSTRNGLTAKNGVN 113
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY+ + +LY T G + Q + + A+G T G G E ++ ++
Sbjct: 114 GSVRGRLGYDF-NPFMLYGTAGLAIGQNKLSDDTSSDSKTAVGYTVGAGAET-FITNNVT 171
Query: 178 ARLEYRASKYSK----------VEGF-YNTISLGVGMKF 205
ARLEYR + Y K G+ ++ +G+G+KF
Sbjct: 172 ARLEYRYTDYGKKNFDLDSGNFSRGYDEQSVKVGIGVKF 210
>gi|260469600|ref|ZP_05813765.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|259028626|gb|EEW29937.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
Length = 217
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
LAV + AL +A AAD V+ P A +P+ + GPYAG++ Y
Sbjct: 11 LAVALGLFALGG--TAYAADVVQEEP-------PAPAPVAELPVAS-WAGPYAGINLGY- 59
Query: 66 GSFGEEAHHNAG---------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHG 115
G G + G GS+F GY + +YG E ++ Y DN +HS G
Sbjct: 60 GFSGRTKEKDLGFETDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGVHSKGG 119
Query: 116 IGGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
GSLR R GY V+ +LLY T G + K E G T +G TAG+G ++ L++
Sbjct: 120 FEGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDTFGSDTATMLGWTAGLGTDI-KLTD 178
Query: 175 SLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205
++ R+EYR + + KV+ N ++ G+GMKF
Sbjct: 179 NVFGRVEYRYTDFGSKSFDNIGKVKATDNRVTFGLGMKF 217
>gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56]
Length = 211
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98
IA + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D
Sbjct: 35 IAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESD 94
Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
+ Y+ V + + + +G GS+R R GY++ + LLY T G + + + +
Sbjct: 95 LGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKT 153
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205
A G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G+KF
Sbjct: 154 AYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 211
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 18/184 (9%)
Query: 38 VPTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMY 93
+P + P++ ++ G Y G + YN G FG + H + GG +F GYN + I+Y
Sbjct: 30 IPEAPVAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVY 89
Query: 94 GVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152
GVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G + +
Sbjct: 90 GVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTS 148
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGV 201
+ + G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+
Sbjct: 149 DESKTNFGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGI 207
Query: 202 GMKF 205
G+KF
Sbjct: 208 GVKF 211
>gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae]
Length = 211
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 18/183 (9%)
Query: 39 PTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYG 94
P + P++ ++ G Y G + YN G FG + H + GG +F GYN + I+YG
Sbjct: 31 PEAPVAQEAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYG 90
Query: 95 VEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153
VE D+ Y+ V + + + +G GS+R R GY++ + LLY T G + + +
Sbjct: 91 VESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSD 149
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVG 202
+ G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G
Sbjct: 150 ESKTNFGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIG 208
Query: 203 MKF 205
+KF
Sbjct: 209 VKF 211
>gi|218663696|ref|ZP_03519626.1| outer membrane protein [Rhizobium etli IE4771]
Length = 203
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98
+A + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D
Sbjct: 27 VAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESD 86
Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
+ Y+ V + + + +G GS+R R GY++ + LLY T G + + + +
Sbjct: 87 LGYSGDDVSSGGVENKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKT 145
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205
A G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G+KF
Sbjct: 146 AYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 203
>gi|209548691|ref|YP_002280608.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534447|gb|ACI54382.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 211
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 38 VPTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMY 93
+P + P++ + G Y G + YN G FG + H + GG +F GYN + I+Y
Sbjct: 30 IPEAPVAQEAPVKPAGSWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVY 89
Query: 94 GVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152
GVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G + +
Sbjct: 90 GVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTS 148
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGV 201
+ + G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+
Sbjct: 149 DESKTNYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGI 207
Query: 202 GMKF 205
G+KF
Sbjct: 208 GVKF 211
>gi|319784400|ref|YP_004143876.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170288|gb|ADV13826.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 220
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
LAV + AL+ +A AAD V P A +P+ + GPYAGL+ Y
Sbjct: 11 LAVALGLFALSG--TAYAADVVSEEP-------PAPAPIAELPVAS-WAGPYAGLNVGY- 59
Query: 66 GSFGEEAHHNAG------------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN--IH 111
G G + G GS+F GY + +YG E ++ Y V D+ ++
Sbjct: 60 GFSGHTKEKDLGVDNVDVGTKGFVGSVFGGYQWQQENFVYGAEAELGYN-GVKGDDSGVN 118
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
S G GSLR R GY V+ +LLY T G + K E G +G TAG+G ++
Sbjct: 119 SKAGFEGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDVYGSDRATLLGWTAGLGTDI- 177
Query: 171 GLSESLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205
L++++ R+EYR + + KV+ N ++ GVGMKF
Sbjct: 178 KLTDNVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 220
>gi|86357119|ref|YP_469011.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86281221|gb|ABC90284.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 211
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98
+A + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D
Sbjct: 35 VAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESD 94
Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
+ Y+ V + + + +G GS+R R GY++ + LLY T G + + + +
Sbjct: 95 LGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTSDESKT 153
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205
G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G+KF
Sbjct: 154 NYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|3914201|sp|Q45110|OM25_BRUCA RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457931|gb|AAB36692.1| 25 kDa outer membrane protein [Brucella canis]
Length = 213
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 36/227 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEV 169
G GSLR R GY++ + ++ Y T G +Q K G GE + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDGE-SKFRVGWTAGAGLEA 167
Query: 170 GGLSESLVARLEYRASKYSK---------VEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++YS V +T I +G+G KF
Sbjct: 168 -KLTDNILGRVEYRYTQYSNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|13476553|ref|NP_108123.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14027314|dbj|BAB54268.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 218
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY- 64
LAV + AL +A AAD V+ P A +P+ + GPYAGL+ Y
Sbjct: 11 LAVALGLFALGG--TAYAADVVQEEP-------PAPAPVAELPVAS-WAGPYAGLNVGYG 60
Query: 65 -NGSFGEEAHHNAG------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116
+G E+ + GS+F GY + +YG E ++ Y DN I+S G
Sbjct: 61 FSGRTKEKDFDVSTDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGINSKAGF 120
Query: 117 GGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSE 174
GSLR R GY V+ +LLY T G + K E G +G TAGVG ++ L++
Sbjct: 121 EGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDTVLGVSDRATMLGWTAGVGTDI-KLTD 179
Query: 175 SLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205
++ R+EYR + + KV+ N ++ GVGMKF
Sbjct: 180 NVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 218
>gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4]
gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTI--ATNRYVPIRHDFNGPYA 58
M+ L + + SS L+ A AAD V VP A + P+ ++ G Y
Sbjct: 1 MRTLVMILLASSAGLSLVTGAHAADAVMS--------VPEAPAAVDMPAPV-SNWAGAYV 51
Query: 59 GLSALYNGSFGEEAHHNA---GGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSL 113
G + Y + +A GG ++ GYN+++ I+YG E D+ Y ++
Sbjct: 52 GGAGTYTMGRSHGSKFSARAFGGQVYGGYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGK 111
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
G+ GS+R R GY++ + ++Y T G A +G G + A+G T G GVE ++
Sbjct: 112 QGVNGSIRGRVGYDL-NPFMVYGTAGVAAADTKISGAGGSDSKAALGYTVGAGVEA-MVT 169
Query: 174 ESLVARLEYRASKY---------SKV-EGFYN-TISLGVGMKF 205
++ R+EYR + Y SKV GF + ++ +G+GMKF
Sbjct: 170 NNITTRVEYRYTDYQNKDYNIGGSKVSRGFDDQSVKVGIGMKF 212
>gi|218508536|ref|ZP_03506414.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 144
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 14/144 (9%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58
M+ L + S+ A+A AQAAD V + VP + P++ ++ G Y
Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQ--------VPEAPVAQDAPVKPAGNWEGFYL 52
Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115
G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112
Query: 116 IGGSLRIRGGYEVSDSLLLYATVG 139
GS+R R GY++ + LLY T G
Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAG 135
>gi|148560659|ref|YP_001258682.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
gi|3914204|sp|Q45335|OM25_BRUO2 RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457929|gb|AAB06702.1| 25 kDa outer membrane protein [Brucella ovis]
gi|148371916|gb|ABQ61895.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
Length = 201
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEG+ Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY-SKVEGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y +K++ I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKLDT--QDIRVGIGYKF 201
>gi|254718838|ref|ZP_05180649.1| OmpA-like transmembrane domain protein [Brucella sp. 83/13]
gi|265983822|ref|ZP_06096557.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838760|ref|ZP_07471594.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
gi|306843662|ref|ZP_07476262.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|206596726|emb|CAQ68393.1| outer membrane protein 25 [Brucella sp. BO1]
gi|264662414|gb|EEZ32675.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306275972|gb|EFM57681.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|306406162|gb|EFM62407.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
Length = 213
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTNVRNKLDTQDIRVGIGYKF 213
>gi|23501588|ref|NP_697715.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|62289663|ref|YP_221456.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82699590|ref|YP_414164.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|163842972|ref|YP_001627376.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|254688973|ref|ZP_05152227.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 6 str.
870]
gi|254697107|ref|ZP_05158935.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254701484|ref|ZP_05163312.1| OmpA-like transmembrane domain protein [Brucella suis bv. 5 str.
513]
gi|254704031|ref|ZP_05165859.1| OmpA-like transmembrane domain protein [Brucella suis bv. 3 str.
686]
gi|254707067|ref|ZP_05168895.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M163/99/10]
gi|254709823|ref|ZP_05171634.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
B2/94]
gi|254713826|ref|ZP_05175637.1| OmpA-like transmembrane domain protein [Brucella ceti M644/93/1]
gi|254717116|ref|ZP_05178927.1| OmpA-like transmembrane domain protein [Brucella ceti M13/05/1]
gi|254730003|ref|ZP_05188581.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 4 str.
292]
gi|256031313|ref|ZP_05444927.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M292/94/1]
gi|256159433|ref|ZP_05457205.1| OmpA-like transmembrane domain protein [Brucella ceti M490/95/1]
gi|256254721|ref|ZP_05460257.1| OmpA-like transmembrane domain protein [Brucella ceti B1/94]
gi|256257221|ref|ZP_05462757.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 9 str.
C68]
gi|256369135|ref|YP_003106643.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260168451|ref|ZP_05755262.1| OmpA-like transmembrane domain protein [Brucella sp. F5/99]
gi|260545586|ref|ZP_05821327.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260754463|ref|ZP_05866811.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260757682|ref|ZP_05870030.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260761509|ref|ZP_05873852.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883492|ref|ZP_05895106.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|261218931|ref|ZP_05933212.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261221901|ref|ZP_05936182.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261314536|ref|ZP_05953733.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261317361|ref|ZP_05956558.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261321570|ref|ZP_05960767.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261752028|ref|ZP_05995737.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261754686|ref|ZP_05998395.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261757914|ref|ZP_06001623.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265988399|ref|ZP_06100956.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265997865|ref|ZP_06110422.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|3914205|sp|Q45689|OM25_BRUSU RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|68067868|sp|Q44664|OM25_BRUAB RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457937|gb|AAB36695.1| 25 kDa outer membrane protein [Brucella suis 1330]
gi|23347502|gb|AAN29630.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|46251178|gb|AAS84560.1| Omp25 [Brucella ceti]
gi|46251180|gb|AAS84561.1| Omp25 [Brucella ceti]
gi|46251182|gb|AAS84562.1| Omp25 [Brucella pinnipedialis]
gi|46251184|gb|AAS84563.1| Omp25 [Brucella ceti]
gi|62195795|gb|AAX74095.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82615691|emb|CAJ10678.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|157310307|emb|CAN43865.1| outer membrane protein 25 [Brucella microti CCM 4915]
gi|157310309|emb|CAN43866.1| outer membrane protein 25 [Brucella microti]
gi|163673695|gb|ABY37806.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|255999295|gb|ACU47694.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260096993|gb|EEW80868.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260668000|gb|EEX54940.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260671941|gb|EEX58762.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674571|gb|EEX61392.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260873020|gb|EEX80089.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|260920485|gb|EEX87138.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260924020|gb|EEX90588.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261294260|gb|EEX97756.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261296584|gb|EEY00081.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261303562|gb|EEY07059.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261737898|gb|EEY25894.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261741781|gb|EEY29707.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261744439|gb|EEY32365.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262552333|gb|EEZ08323.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|264660596|gb|EEZ30857.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 213
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|161618670|ref|YP_001592557.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
gi|161335481|gb|ABX61786.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
Length = 213
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|254693454|ref|ZP_05155282.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 3 str.
Tulya]
gi|261213709|ref|ZP_05927990.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915316|gb|EEX82177.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 213
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRTKLDTQDIRVGIGYKF 213
>gi|306842032|ref|ZP_07474705.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
gi|306287873|gb|EFM59293.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
Length = 213
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGLGYKF 213
>gi|256060827|ref|ZP_05450987.1| OmpA-like transmembrane domain protein [Brucella neotomae 5K33]
gi|261324818|ref|ZP_05964015.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
gi|3914203|sp|Q45326|OM25_BRUNE RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457935|gb|AAB36694.1| 25 kDa outer membrane protein [Brucella neotomae]
gi|261300798|gb|EEY04295.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
Length = 213
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|17987532|ref|NP_540166.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225852222|ref|YP_002732455.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis ATCC 23457]
gi|256044394|ref|ZP_05447298.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 1
str. Rev.1]
gi|256264270|ref|ZP_05466802.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|260563745|ref|ZP_05834231.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|265990813|ref|ZP_06103370.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|3914202|sp|Q45321|OM25_BRUME RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457927|gb|AAB06701.1| 25 kDa outer membrane protein [Brucella melitensis]
gi|17983234|gb|AAL52430.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225640587|gb|ACO00501.1| OmpA-like transmembrane domain protein [Brucella melitensis ATCC
23457]
gi|260153761|gb|EEW88853.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|263001597|gb|EEZ14172.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094531|gb|EEZ18340.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|326408721|gb|ADZ65786.1| OmpA-like transmembrane domain protein [Brucella melitensis M28]
gi|326538444|gb|ADZ86659.1| OmpA-like transmembrane domain protein [Brucella melitensis M5-90]
Length = 213
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 23/197 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY 187
L+++++ R+EYR ++Y
Sbjct: 168 KLTDNILGRVEYRYTQY 184
>gi|189023912|ref|YP_001934680.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225627199|ref|ZP_03785237.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237815152|ref|ZP_04594150.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260566721|ref|ZP_05837191.1| outer membrane protein [Brucella suis bv. 4 str. 40]
gi|189019484|gb|ACD72206.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225618034|gb|EEH15078.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789989|gb|EEP64199.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260156239|gb|EEW91319.1| outer membrane protein [Brucella suis bv. 4 str. 40]
Length = 305
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE-A 259
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305
>gi|297248070|ref|ZP_06931788.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
gi|297175239|gb|EFH34586.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
Length = 305
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE-A 259
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305
>gi|294852064|ref|ZP_06792737.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294820653|gb|EFG37652.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 305
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE-A 259
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305
>gi|163759157|ref|ZP_02166243.1| outer membrane protein [Hoeflea phototrophica DFL-43]
gi|162283561|gb|EDQ33846.1| outer membrane protein [Hoeflea phototrophica DFL-43]
Length = 212
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 85 NVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
N + I+YGVEGD+ Y+ + G GSLR R GY++ + LLYAT G
Sbjct: 82 NWQSDNIVYGVEGDLGYSGADASLGGVTGEQGFNGSLRARLGYDI-NPFLLYATGGLAAT 140
Query: 144 QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK----------VEGF 193
+ T AG T +G TAG G E ++E++ RLEYR + Y GF
Sbjct: 141 RAEVTSAAGSDTNTHLGWTAGAGAEA-FVTENITTRLEYRYTDYGSETYNLGGTNVSSGF 199
Query: 194 YN-TISLGVGMKF 205
+ ++ LG+GMKF
Sbjct: 200 DDHSVRLGIGMKF 212
>gi|227821495|ref|YP_002825465.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340494|gb|ACP24712.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
Length = 212
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 38 VPTIATNRYV-PIRHDFNGPYAGLSALYNGSFGE-EAHHNA-----GGSIFAGYNVEDSC 90
+P Y P +++G Y G +A N +GE +A N GG ++ GYNV+D
Sbjct: 30 IPAAPAAEYTEPAVKNWSGAYVGGTA--NWHYGEADATGNNKSVAFGGGLYGGYNVQDGQ 87
Query: 91 IMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG 149
++YG E DV Y + G+ GSLR R G ++ + +L+Y T G + +
Sbjct: 88 MVYGGEADVNYAGNDSTSSGRKVKQGVNGSLRGRVGVDM-NPVLVYGTAGLALGNAKLST 146
Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY---------SKVEGFYN--TIS 198
AG +G TAG G E +++++ AR+EYR + Y S V Y+ ++
Sbjct: 147 PAGSDDKTLVGWTAGAGAET-FVTDNVTARVEYRYTDYASKDFRAGGSTVSSGYDEHSVR 205
Query: 199 LGVGMKF 205
LG+G+KF
Sbjct: 206 LGMGVKF 212
>gi|256113236|ref|ZP_05454104.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 3
str. Ether]
gi|265994648|ref|ZP_06107205.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765761|gb|EEZ11550.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
Length = 213
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 23/197 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY 187
L+++++ R+EYR ++Y
Sbjct: 168 KLTDNILGRVEYRYTQY 184
>gi|159185080|ref|NP_355120.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140353|gb|AAK87905.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL---SALYNG 66
V+SL S +A AAD V P +A +P+ ++GPY G+ + NG
Sbjct: 6 VTSLLALSASTAMAADAVYETP------APPVAQET-LPV-FTWSGPYLGIQGGAGWANG 57
Query: 67 SF---GEEAHHNAGGSI---FAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIG-- 117
F G + G I FAGYN + D+ ++ G+EGDV Y DN +S +G
Sbjct: 58 DFSAGGPVVSDDFNGGILGAFAGYNYQFDNNMVLGIEGDVDYN---WNDNDYSGIKVGTD 114
Query: 118 --GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GS+R R GY D L+YAT G + + G+ G T G GV+ +++
Sbjct: 115 WQGSVRGRVGYAF-DHALIYATAGWTATRGFIETPVGDDKATFNGYTVGAGVDY-AFTDN 172
Query: 176 LVARLEYRASKYSKVEGF-------YNTISLGVGMKF 205
+ RLEYR + Y + F +T+ +G+G+KF
Sbjct: 173 VFGRLEYRYNDYGDKDIFGINTDFDQHTVKVGLGVKF 209
>gi|150396648|ref|YP_001327115.1| porin [Sinorhizobium medicae WSM419]
gi|150028163|gb|ABR60280.1| porin [Sinorhizobium medicae WSM419]
Length = 215
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 81 FAGYNVEDSCIMYGVEGDVRY-----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
FAGYN + + GVEGDV Y TV V N + GS+R R GY V+D LLY
Sbjct: 79 FAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGTNTDVGTDVSGSVRARLGYTVNDRTLLY 138
Query: 136 ATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------ 188
AT G V + + + A + G T G GV+ G ++S+ R EYR + +S
Sbjct: 139 ATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAEYRYNDFSDKDVGG 197
Query: 189 -KVEGFYNTISLGVGMKF 205
V+ + ++GVG+KF
Sbjct: 198 VDVDLDQHQFTIGVGVKF 215
>gi|150396008|ref|YP_001326475.1| porin [Sinorhizobium medicae WSM419]
gi|150027523|gb|ABR59640.1| porin [Sinorhizobium medicae WSM419]
Length = 212
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L + S++AL +F +A AAD V +P Y P +++G Y G
Sbjct: 1 MRMLTTTLMASAMALVAFQAAHAADVVDE--------IPAAPAAEYTEPAVRNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS--- 112
+ ++ + +N G ++ GYNV+D ++YG E D+ YT ++ HS
Sbjct: 53 GTIDWHHGEADATGNNKSVGTGGGLYGGYNVQDGQMVYGGEADINYT----GNDSHSSGR 108
Query: 113 --LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G+ GS+R R G +V + +L+Y T G + AG +G TAGVG E
Sbjct: 109 RVQQGLNGSVRARVGVDV-NPVLVYGTAGVALGNAELKTPAGSDDKTLVGWTAGVGAET- 166
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYN--TISLGVGMKF 205
+++++ AR EYR + Y + + Y+ + LG+G+KF
Sbjct: 167 FVTDNITARAEYRYTDYGSKDFRTGGTTISSGYDEHAVKLGMGVKF 212
>gi|15964926|ref|NP_385279.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|307300997|ref|ZP_07580766.1| porin [Sinorhizobium meliloti BL225C]
gi|15074105|emb|CAC45752.1| Probable outer membrane protein [Sinorhizobium meliloti 1021]
gi|306903952|gb|EFN34538.1| porin [Sinorhizobium meliloti BL225C]
Length = 212
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L + S++AL +F +A AAD V VP Y P +++G Y G
Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLH 114
+ ++ + +N G ++ GYNV+D ++YG E DV YT +
Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYNVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++
Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170
Query: 175 SLVARLEYRASKY---------SKVEGFYN--TISLGVGMKF 205
++ AR EYR + Y S + Y+ ++ LG+G+KF
Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212
>gi|769745|emb|CAA55872.1| immunogenic protein [Brucella abortus]
gi|89741444|gb|ABD77595.1| 25 kDa outer membrane protein [Brucella abortus]
Length = 213
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSL R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLGARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
L+++++ R+EYR ++Y + V +T I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|307317731|ref|ZP_07597169.1| porin [Sinorhizobium meliloti AK83]
gi|306896493|gb|EFN27241.1| porin [Sinorhizobium meliloti AK83]
Length = 212
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L + S++AL +F +A AAD V VP Y P +++G Y G
Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLH 114
+ ++ + +N G ++ GY+V+D ++YG E DV YT +
Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYDVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++
Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170
Query: 175 SLVARLEYRASKY---------SKVEGFYN--TISLGVGMKF 205
++ AR EYR + Y S + Y+ ++ LG+G+KF
Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212
>gi|15965438|ref|NP_385791.1| outer-membrane protein [Sinorhizobium meliloti 1021]
gi|307310613|ref|ZP_07590260.1| porin [Sinorhizobium meliloti BL225C]
gi|15074619|emb|CAC46264.1| Probable outer-membrane protein [Sinorhizobium meliloti 1021]
gi|306899723|gb|EFN30349.1| porin [Sinorhizobium meliloti BL225C]
Length = 215
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 81 FAGYNVEDSCIMYGVEGDVRY-----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
FAGYN + + GVEGDV Y TV V + + + GS+R R GY V+D L+Y
Sbjct: 79 FAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGSDTEAGTDVSGSVRARLGYTVNDRTLIY 138
Query: 136 ATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------ 188
AT G V + + + A + G T G GV+ G ++S+ R EYR + +
Sbjct: 139 ATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAEYRYNDFGDKDVGG 197
Query: 189 -KVEGFYNTISLGVGMKF 205
V+ + ++GVG+KF
Sbjct: 198 VNVDLDQHQFTVGVGVKF 215
>gi|239831535|ref|ZP_04679864.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
gi|239823802|gb|EEQ95370.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
Length = 266
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
++S AL F +A AAD ++ P + + ++ + G Y GL Y G
Sbjct: 62 IASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGYG 110
Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGIGG 118
+ N GSI +AG+N + +YGVEGD Y+ + N + G G
Sbjct: 111 WNKVKTNTDGSIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKNGLEVKEGFEG 170
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
SLR R GY++ + ++ Y T G Q K + G E + +G TAG G+E L+++++
Sbjct: 171 SLRGRLGYDL-NPVMPYITAGVAGKQVKLDNGFDDE-SKFRVGWTAGAGLEA-KLTDNIL 227
Query: 178 ARLEYRASKYSK------VEGFYNT-----ISLGVGMKF 205
R+EYR +++ E N I +GVG KF
Sbjct: 228 GRVEYRYTQFGNKTYDLGTESVRNKLDTHDIRVGVGYKF 266
>gi|153009914|ref|YP_001371129.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151561802|gb|ABS15300.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 213
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
++S AL F +A AAD ++ P + + ++ + G Y GL Y G
Sbjct: 9 IASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGYG 57
Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118
+A + G++ +AG+N + +YGVEGD Y+ D + G G
Sbjct: 58 WNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 117
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
SLR R GY++ + ++ Y T G +Q K + G E + +G TAG G+E L+++++
Sbjct: 118 SLRARLGYDL-NPVMPYITAGVAGSQVKLDNGFDDE-SKFRVGWTAGAGLEA-KLTDNIL 174
Query: 178 ARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205
R+EYR +++ V +T I +GVG KF
Sbjct: 175 GRVEYRYTQFGNKTYDLGNESVRNKLDTHDIRVGVGYKF 213
>gi|307320995|ref|ZP_07600402.1| porin [Sinorhizobium meliloti AK83]
gi|306893369|gb|EFN24148.1| porin [Sinorhizobium meliloti AK83]
Length = 213
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
FAGYN + + GVEGDV Y V + + + GS+R R GY V+D L+YAT
Sbjct: 79 FAGYNYQHGDWVVGVEGDVSYNWNDETVFGSDTEAGTDVSGSVRARLGYTVNDRTLIYAT 138
Query: 138 VGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-------K 189
G V + + + A + G T G GV+ G ++S+ R EYR + +
Sbjct: 139 GGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAEYRYNDFGDKDVGGVN 197
Query: 190 VEGFYNTISLGVGMKF 205
V+ + ++GVG+KF
Sbjct: 198 VDLDQHQFTVGVGVKF 213
>gi|218513075|ref|ZP_03509915.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 134
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 82 AGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
GYN + I+YGVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G
Sbjct: 1 TGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGL 59
Query: 141 DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------- 191
+ + + + A G T G GVE ++ ++ RLEYR + Y +
Sbjct: 60 ALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFS 118
Query: 192 -GF-YNTISLGVGMKF 205
G+ N++ LG+G+KF
Sbjct: 119 RGYDENSVKLGIGVKF 134
>gi|332717162|ref|YP_004444628.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
gi|325063847|gb|ADY67537.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
Length = 223
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 32/196 (16%)
Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSALY------NGSFGEEAHHNAGG---SIFAGYNV 86
G +P V ++G Y G SA Y + +FG H G S FAGYN
Sbjct: 34 GDIPAAPVVNDVAPAFSWDGVYVGASAGYGWNRVKSTTFGVTTKHEFDGGRFSGFAGYNA 93
Query: 87 EDS-CIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
E + I+ GVEGD+ Y ++ + + G+ GS R+R GY + D L+Y G
Sbjct: 94 EVAPSIILGVEGDLGYAWGDKTIVTSEVSA--GLNGSARLRAGYAI-DRALIYTAAGYTA 150
Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT------ 196
GE + + G T G GV+ + +L R+EYR + + K Y+T
Sbjct: 151 TDSEVKAPFGEDSKVLHGWTVGAGVDY-AFTNNLFGRVEYRYNDFGKAT--YHTGPITST 207
Query: 197 -------ISLGVGMKF 205
+ +G+G+KF
Sbjct: 208 GDVSEHVVKVGLGVKF 223
>gi|325292505|ref|YP_004278369.1| outer membrane protein [Agrobacterium sp. H13-3]
gi|325060358|gb|ADY64049.1| outer membrane protein [Agrobacterium sp. H13-3]
Length = 218
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 40/230 (17%)
Query: 3 KLFLAV-GVSSLALASFCSAQAADPVRRAHHGGRGVVPT--IATNRYVPIRHDFNGPYAG 59
++F+A S++A A F +A AAD V VP +A ++ P+++ + G Y G
Sbjct: 2 RIFVATIMASTIAAAGFSAAHAADAVND--------VPQAPVAYDQPAPVKN-WTGAYLG 52
Query: 60 LSALYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGVEGDV-----RYTVPVLA 107
+A Y+ +G + N G G I+ GYN+++ I+YG E DV R + +
Sbjct: 53 GTANYD--WGRFSSSNDGRDAKGAGGGIYGGYNMQNGQIVYGAEADVNLGRERGSAGTVG 110
Query: 108 DN-IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
N + G+ GSLR R GY++ + LLY T G + + + A+G T G G
Sbjct: 111 GNAVEGKQGVNGSLRARVGYDM-NPFLLYGTAGLAASDNKVRDATSKDSATALGYTVGAG 169
Query: 167 VEVGGLSESLVARLEYRASKYSKVE----------GFYN-TISLGVGMKF 205
VE +++++ ARLEYR S Y K + GF + ++ G+G+KF
Sbjct: 170 VEA-MVTDNITARLEYRYSDYQKKDYSLDSGAFSRGFDDHSVKAGIGVKF 218
>gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72
LA + AA P + P P ++GPYAG YN S +
Sbjct: 14 LATIALALPLAAMPAHAQDNASETAFPDSRIPESAPPVAIWSGPYAGTFVGYNVSRFDNL 73
Query: 73 H------HNAGGSIFAGYNVEDSCIMYGVEGDV---------RYTVPVLADNIHSLHGIG 117
G +AG+N++D ++YGVEGDV R + L ++ +
Sbjct: 74 RGASISGDGVAGGAYAGFNLQDGSLVYGVEGDVGGAGFDATRRNALGNL--DLSGESNVF 131
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GSLR R G +V D L+Y T G +A+ + + ++G T G GVE +++S+
Sbjct: 132 GSLRGRVGVDV-DPFLVYGTGGLAIAETELSLGGVSDSEASVGYTIGAGVEA-QVTDSIR 189
Query: 178 ARLEYRASKY 187
RLEYR S +
Sbjct: 190 TRLEYRYSDF 199
>gi|222087507|ref|YP_002546044.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221724955|gb|ACM28111.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 204
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 53 FNGPYAGL---SALYNGSF----GEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTV 103
++GPY G+ A+ G+F G+++ GG + F GYN + ++ GV+G++ Y
Sbjct: 35 WSGPYLGVHGGGAITKGNFKFGSGDQSEDFKGGFLGNFFGYNYQFDKVVVGVDGNIDYNW 94
Query: 104 PVLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIA 158
A + + +G G++R R GY D+LL+Y G A+ + + +G+ +
Sbjct: 95 NNKA--VANASSVGTDWSGAVRGRVGYAF-DNLLIYGAAGWTAARGFADVSGSGDGKVVF 151
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
G TAG GV+ + ++ AR EYR S + K + +I+LGVG+KF
Sbjct: 152 SGWTAGTGVDY-AFTNNIFARAEYRYSDFGSKELQGVKSDLTEQSINLGVGLKF 204
>gi|218461155|ref|ZP_03501246.1| outer membrane protein [Rhizobium etli Kim 5]
Length = 168
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98
+A + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D
Sbjct: 35 VAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESD 94
Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
+ Y+ V + + + +G GS+R R GY++ + LLY T G
Sbjct: 95 LGYSGDDVSSGGVENKYGWNGSVRGRVGYDM-NPFLLYGTAG 135
>gi|31322670|gb|AAP22071.1| outer membrane protein [Sinorhizobium fredii]
Length = 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 43/197 (21%)
Query: 38 VPTIATNRYV-PIRHDFNGPYAGLSALYNGSFGEEAHHN----AGGSIFA--------GY 84
VP Y P +++G Y G +A + HH GG+ A GY
Sbjct: 30 VPAAPAAEYTDPAVKNWSGAYVGGTANW--------HHGEADATGGNTSAGFGGGLYGGY 81
Query: 85 NVEDSCIMYGVEGDVRYTVPVLADNIHS-----LHGIGGSLRIRGGYEVSDSLLLYATVG 139
NV+D ++YG E DV Y ++ HS G+ GS+R R G ++ + +L+Y T G
Sbjct: 82 NVQDGQMVYGGEADVNYA----GNDSHSSGRRVKQGVNGSVRGRVGVDL-NPVLVYGTAG 136
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY---------SKV 190
+ + AG +G TAG G E +++++ AR+EYR + Y S V
Sbjct: 137 LALGNAKLSTPAGSDDKTLVGWTAGAGAET-FVTDNVTARVEYRYTDYASKDFRTGGSTV 195
Query: 191 EGFYN--TISLGVGMKF 205
Y+ ++ LG+G+KF
Sbjct: 196 SSGYDEHSVKLGMGVKF 212
>gi|315498453|ref|YP_004087257.1| porin [Asticcacaulis excentricus CB 48]
gi|315416465|gb|ADU13106.1| porin [Asticcacaulis excentricus CB 48]
Length = 199
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 52 DFNGPY---------AGLSALYN-GSFGEEAHHNAG---GSIFAGYNVEDSCIMYGVEGD 98
DF+GPY L Y+ G+ E A + G + G+N + + ++GVE D
Sbjct: 23 DFSGPYIAGQGGYAKTKLEVTYSAGTTTESASDDTGNGAAGVILGFNAQSNGAVFGVETD 82
Query: 99 VRYT-----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153
+ + VL + + + G++R R G+ VS + L Y G + Y +
Sbjct: 83 LNWNNAKDRYRVLGEEVETGIDYSGAVRARLGF-VSGNTLFYGAAGVAGTRAYVEYDGEK 141
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-------FYNTISLGVGMKF 205
T G TAG+G + S+ + R+EYR + + VE ++ LG+GMKF
Sbjct: 142 ETETVAGWTAGIGADH-AFSDRVFGRIEYRYTDFGDVEDDGVKAELMQQSVWLGLGMKF 199
>gi|146425515|emb|CAM89327.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425525|emb|CAM89318.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425535|emb|CAM89309.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425545|emb|CAM89300.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425565|emb|CAM89282.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425575|emb|CAM89273.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425585|emb|CAM89264.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425595|emb|CAM89255.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425605|emb|CAM89246.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425615|emb|CAM89237.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425625|emb|CAM89228.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425635|emb|CAM89219.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425645|emb|CAM89210.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425655|emb|CAM89201.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425665|emb|CAM89192.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425675|emb|CAM89183.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425685|emb|CAM89174.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425695|emb|CAM89165.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425705|emb|CAM89156.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425715|emb|CAM89147.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425725|emb|CAM89138.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425735|emb|CAM89129.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425745|emb|CAM89120.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425755|emb|CAM89111.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425765|emb|CAM89102.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425775|emb|CAM89093.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425785|emb|CAM89084.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425795|emb|CAM89075.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425805|emb|CAM89066.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425815|emb|CAM89057.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425825|emb|CAM89048.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425835|emb|CAM89039.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425845|emb|CAM89030.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425855|emb|CAM89021.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425865|emb|CAM89012.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425875|emb|CAM89003.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425885|emb|CAM88994.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425895|emb|CAM88985.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425905|emb|CAM88976.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146426370|emb|CAM89822.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426380|emb|CAM89813.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426390|emb|CAM89804.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426400|emb|CAM89795.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426410|emb|CAM89786.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426420|emb|CAM89777.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426430|emb|CAM89768.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426440|emb|CAM89759.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426450|emb|CAM89750.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426460|emb|CAM89741.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426470|emb|CAM89732.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426480|emb|CAM89723.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426490|emb|CAM89714.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426500|emb|CAM89705.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426510|emb|CAM89696.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426520|emb|CAM89687.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426530|emb|CAM89678.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426540|emb|CAM89669.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426550|emb|CAM89660.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426560|emb|CAM89651.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426570|emb|CAM89642.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426580|emb|CAM89633.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426590|emb|CAM89624.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426600|emb|CAM89615.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426610|emb|CAM89606.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426620|emb|CAM89597.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426630|emb|CAM89588.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426640|emb|CAM89579.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426650|emb|CAM89570.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426660|emb|CAM89561.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426670|emb|CAM89552.2| 25 kDa outer membrane protein [Brucella suis ATCC 23445]
gi|146426680|emb|CAM89543.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426690|emb|CAM89534.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426700|emb|CAM89525.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426710|emb|CAM89516.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426720|emb|CAM89507.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426730|emb|CAM89498.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426740|emb|CAM89489.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426750|emb|CAM89480.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426760|emb|CAM89471.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426770|emb|CAM89462.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426780|emb|CAM89453.2| 25 kDa outer membrane protein [Brucella suis 1330]
gi|146426900|emb|CAM89345.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146426910|emb|CAM89336.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146427366|emb|CAM90326.2| 25 kDa outer membrane protein [Brucella sp. 5/95]
gi|146427376|emb|CAM90317.2| 25 kDa outer membrane protein [Brucella sp. 59/94]
gi|146427386|emb|CAM90308.2| 25 kDa outer membrane protein [Brucella sp. UK28/03-13840]
gi|146427396|emb|CAM90299.2| 25 kDa outer membrane protein [Brucella sp. F7/99]
gi|146427406|emb|CAM90290.2| 25 kDa outer membrane protein [Brucella sp. F10/99]
gi|146427416|emb|CAM90281.2| 25 kDa outer membrane protein [Brucella sp. F9/99]
gi|146427426|emb|CAM90272.2| 25 kDa outer membrane protein [Brucella sp. F8/99]
gi|146427436|emb|CAM90263.2| 25 kDa outer membrane protein [Brucella sp. F6/99]
gi|146427446|emb|CAM90254.2| 25 kDa outer membrane protein [Brucella sp. UK5/01]
gi|146427456|emb|CAM90245.2| 25 kDa outer membrane protein [Brucella sp. UK40/99]
gi|146427466|emb|CAM90236.2| 25 kDa outer membrane protein [Brucella sp. UK13/99]
gi|146427476|emb|CAM90227.2| 25 kDa outer membrane protein [Brucella sp. 61/94]
gi|146427486|emb|CAM90218.2| 25 kDa outer membrane protein [Brucella sp. 4/96]
gi|146427496|emb|CAM90209.2| 25 kDa outer membrane protein [Brucella sp. 55/94]
gi|146427506|emb|CAM90200.2| 25 kDa outer membrane protein [Brucella sp. UK24/00 (M192)]
gi|146427516|emb|CAM90191.2| 25 kDa outer membrane protein [Brucella sp. 44/94]
gi|146427526|emb|CAM90182.2| 25 kDa outer membrane protein [Brucella sp. 39/94]
gi|146427536|emb|CAM90173.2| 25 kDa outer membrane protein [Brucella sp. UK31/04]
gi|146427546|emb|CAM90164.2| 25 kDa outer membrane protein [Brucella sp. VLA04/06]
gi|146427556|emb|CAM90155.2| 25 kDa outer membrane protein [Brucella sp. VLA04/105]
gi|146427566|emb|CAM90146.2| 25 kDa outer membrane protein [Brucella sp. VLA04.72]
gi|146427576|emb|CAM90137.2| 25 kDa outer membrane protein [Brucella sp. VLA04.67]
gi|146427586|emb|CAM90128.2| 25 kDa outer membrane protein [Brucella sp. F96/2]
gi|146427596|emb|CAM90119.2| 25 kDa outer membrane protein [Brucella sp. F23/97]
gi|146427606|emb|CAM90110.2| 25 kDa outer membrane protein [Brucella sp. UK15/02]
gi|146427616|emb|CAM90101.2| 25 kDa outer membrane protein [Brucella sp. UK10/01]
gi|146427626|emb|CAM90092.2| 25 kDa outer membrane protein [Brucella sp. UK4/01]
gi|146427636|emb|CAM90083.2| 25 kDa outer membrane protein [Brucella sp. UK10/00]
gi|146427646|emb|CAM90074.2| 25 kDa outer membrane protein [Brucella sp. UK5/97]
gi|146427656|emb|CAM90065.2| 25 kDa outer membrane protein [Brucella sp. UK3/97]
gi|146427666|emb|CAM90056.2| 25 kDa outer membrane protein [Brucella sp. UK1/97]
gi|146427676|emb|CAM90047.2| 25 kDa outer membrane protein [Brucella sp. 2/96]
gi|146427686|emb|CAM90038.2| 25 kDa outer membrane protein [Brucella sp. 14/95]
gi|146427696|emb|CAM90029.2| 25 kDa outer membrane protein [Brucella sp. UK35/99]
gi|146427706|emb|CAM90020.2| 25 kDa outer membrane protein [Brucella sp. UK15/98]
gi|146427716|emb|CAM90011.2| 25 kDa outer membrane protein [Brucella sp. 52/94]
gi|146427726|emb|CAM90002.2| 25 kDa outer membrane protein [Brucella sp. 36/94]
gi|146427846|emb|CAM89894.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427856|emb|CAM89885.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427866|emb|CAM89876.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427876|emb|CAM89867.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427886|emb|CAM89858.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427896|emb|CAM89849.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427906|emb|CAM89840.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427916|emb|CAM89831.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427988|emb|CAM90407.2| 25 kDa outer membrane protein [Brucella sp. F5/02]
gi|146428001|emb|CAM90398.2| 25 kDa outer membrane protein [Brucella sp. F5/99]
gi|146428011|emb|CAM90389.2| 25 kDa outer membrane protein [Brucella sp. VLA05/8]
gi|146428021|emb|CAM90380.2| 25 kDa outer membrane protein [Brucella sp. VLA05/4]
gi|146428031|emb|CAM90371.2| 25 kDa outer membrane protein [Brucella sp. UK3/05]
gi|146428041|emb|CAM90362.2| 25 kDa outer membrane protein [Brucella sp. 14/94]
gi|146428051|emb|CAM90353.2| 25 kDa outer membrane protein [Brucella sp. UK2/2000]
gi|146428061|emb|CAM90344.2| 25 kDa outer membrane protein [Brucella sp. UK1/2000]
gi|146428071|emb|CAM90335.2| 25 kDa outer membrane protein [Brucella sp. UK43/99]
gi|170015689|emb|CAP05282.1| 25 kDa outer membrane protein [Brucella sp. BO1]
Length = 163
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52
Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119
+A + GSI FAG+N + I+YGVEGD Y+ + D + G GS
Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
LR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160
>gi|307944219|ref|ZP_07659560.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
gi|307772565|gb|EFO31785.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
Length = 242
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPI---RHDFNGPY 57
M++L A +++++A + AAD + A PT T Y P R D++G Y
Sbjct: 19 MKRLACAAIAATVSVAGLAPSYAADLPQAA--------PTYDTT-YEPAPSGRFDWSGAY 69
Query: 58 AGLSALY-----------NGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPV 105
AG S + GSF + + +GG + GYN I+ GVE D + T
Sbjct: 70 AGGSLGWVWSGFDTTSSPTGSFDHDTNGFSGG-VHGGYNFAITPNIVAGVELDFQMTDLY 128
Query: 106 LAD-----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
N+ + S R R GY + D L+Y T G +A A+G
Sbjct: 129 ENTVRNGVNVKTSSAWNSSARARLGYAM-DRFLVYGTAGLAIADLSINANGASEDTTALG 187
Query: 161 GTAGVGVEVGGLSESLVARLEY 182
TAG GVE G +S +L AR+EY
Sbjct: 188 WTAGAGVE-GAISNNLTARVEY 208
>gi|146427796|emb|CAM89939.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427806|emb|CAM89930.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427816|emb|CAM89921.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427826|emb|CAM89912.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427836|emb|CAM89903.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52
Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119
+A + GSI FAG+N + I+YGVEGD Y+ + D + G GS
Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
LR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160
>gi|116251075|ref|YP_766913.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255723|emb|CAK06804.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|220979415|gb|ACL97989.1| outer membrane protein B2 [Rhizobium leguminosarum bv. viciae]
Length = 205
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 17/185 (9%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V ++L L+ A AAD P + V +D++G Y G Y+ S
Sbjct: 6 VACAALTLSVAVPAVAADLTYE--------TPPAPSAGQVSSAYDWSGFYLGAQGGYSWS 57
Query: 68 ----FGEEAHHNAGGS-IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
G + ++G S + AGYN + I+YG+E D Y N ++ S R
Sbjct: 58 QATILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGRA 114
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
R GY +L K + AG+ I IG TAG G+E ++++++ R EY
Sbjct: 115 RVGYAWDRTLFFATAGVAAGGGKVDIPAAGKKDGILIGWTAGGGIE-HAVTDNILVRAEY 173
Query: 183 RASKY 187
R S +
Sbjct: 174 RHSDF 178
>gi|241203671|ref|YP_002974767.1| hypothetical protein Rleg_0932 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857561|gb|ACS55228.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 205
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 17/185 (9%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V + LAL+ A AAD P + V +D++G Y G Y+ S
Sbjct: 6 VACAVLALSVAVPAVAADLTYE--------TPPAPSAGEVSSAYDWSGFYLGAQGGYSWS 57
Query: 68 ----FGEEAHHNAGGS-IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
G + ++G S + AGYN + I+YG+E D Y N ++ S R
Sbjct: 58 QAKILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGRA 114
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
R GY +L K + AG+ I IG TAG G+E ++++++ R EY
Sbjct: 115 RVGYAWDRTLFFATAGVAAGGGKVDISAAGKKDGILIGWTAGGGIE-HAVTDNILVRGEY 173
Query: 183 RASKY 187
R S +
Sbjct: 174 RHSDF 178
>gi|15888468|ref|NP_354149.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|18139945|gb|AAL60203.1|AF445083_1 outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|15156164|gb|AAK86934.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 218
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 40/230 (17%)
Query: 3 KLFLAVGV-SSLALASFCSAQAADPVRRAHHGGRGVVPT--IATNRYVPIRHDFNGPYAG 59
++F+A + S++A A F +A AAD V VP +A ++ ++ D++G Y G
Sbjct: 2 RIFVATLMASTMAAAGFSAAYAADAVNE--------VPQAPVAYDQPAAVK-DWSGAYLG 52
Query: 60 LSALYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGVEGDVRY------TVPVL 106
+ Y+ +G + N G G ++ GYN++ I+YG E DV V
Sbjct: 53 GTVNYD--WGRFSSSNDGRDAKGFGGGVYGGYNMQSGQIVYGAEADVNMGDEKGSAGTVA 110
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
+ G+ GSLR R GY+++ LLY T G V+ + + A+G T G G
Sbjct: 111 GRAVEGKQGVNGSLRGRVGYDMN-PFLLYGTAGLAVSDNKVRDGVNKDSATALGYTVGAG 169
Query: 167 VEVGGLSESLVARLEYRASKYSKVE----------GFYN-TISLGVGMKF 205
VE +++++ ARLEYR S Y K + GF + ++ G+G+KF
Sbjct: 170 VEA-MVTDNITARLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF 218
>gi|146425555|emb|CAM89291.2| 25 kDa outer membrane protein [Brucella melitensis]
Length = 163
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52
Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119
+A + GSI FAG+N + I+YGVEGD Y+ + D + G GS
Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
LR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 113 LRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLE 160
>gi|146427736|emb|CAM89993.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427746|emb|CAM89984.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427756|emb|CAM89975.2| 25 kDa outer membrane protein [Brucella neotomae]
Length = 163
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52
Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119
+A + GSI FAG+N + I+YGVEGD Y+ + D + G GS
Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
LR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 113 LRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160
>gi|146427766|emb|CAM89966.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427776|emb|CAM89957.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427786|emb|CAM89948.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52
Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119
+A + GSI FAG+N + I+YGVEGD Y+ + D G GS
Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGPEVKQGFEGS 112
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
LR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160
>gi|146426790|emb|CAM89444.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426800|emb|CAM89435.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426810|emb|CAM89426.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426820|emb|CAM89417.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426830|emb|CAM89408.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426840|emb|CAM89399.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426850|emb|CAM89390.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426860|emb|CAM89381.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426870|emb|CAM89372.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426880|emb|CAM89363.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426890|emb|CAM89354.2| 25 kDa outer membrane protein [Brucella ovis]
Length = 163
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52
Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119
+A + GSI FAG+N + I+YGVEG+ Y+ + D + G GS
Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQGFEGS 112
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
LR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160
>gi|209548422|ref|YP_002280339.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534178|gb|ACI54113.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 204
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 80 IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
+ AGYN + I+YG+E D Y D G R R GY ++ +L
Sbjct: 74 LHAGYNFQSGNIVYGIENDFNYNFKKNDDANLEWDASG---RARVGYALNRTLFFATAGV 130
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
K + AG+ I IG TAG G+E +++ ++ R EYR S +S +
Sbjct: 131 AAGGGKVDIPTAGKKDGILIGWTAGGGIE-HAVTDHILVRGEYRHSDFSNKD 181
>gi|156739552|gb|ABU93436.1| Omp25 [Brucella abortus]
Length = 123
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T G
Sbjct: 28 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAG 86
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 87 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 115
>gi|156739530|gb|ABU93425.1| Omp25 [Brucella suis]
gi|156739540|gb|ABU93430.1| Omp25 [Brucella abortus]
gi|156739558|gb|ABU93439.1| Omp25 [Brucella melitensis]
gi|156739590|gb|ABU93455.1| Omp25 [Brucella suis]
gi|156739594|gb|ABU93457.1| Omp25 [Brucella suis]
gi|156739614|gb|ABU93467.1| Omp25 [Brucella melitensis]
gi|156739630|gb|ABU93475.1| Omp25 [Brucella suis]
Length = 128
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-D 108
G + LY G +A + GSI FAG+N + I+YGVEGD Y+ + D
Sbjct: 2 GYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKD 61
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+ G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 62 GLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 120
>gi|156739536|gb|ABU93428.1| Omp25 [Brucella abortus]
Length = 105
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G
Sbjct: 11 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 69
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 70 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 98
>gi|156739528|gb|ABU93424.1| Omp25 [Brucella melitensis]
Length = 124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T G
Sbjct: 29 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAG 87
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 88 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 116
>gi|156739534|gb|ABU93427.1| Omp25 [Brucella suis]
gi|156739618|gb|ABU93469.1| Omp25 [Brucella melitensis]
Length = 98
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T G
Sbjct: 3 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAG 61
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 62 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 90
>gi|156739532|gb|ABU93426.1| Omp25 [Brucella suis]
gi|156739566|gb|ABU93443.1| Omp25 [Brucella melitensis]
gi|156739572|gb|ABU93446.1| Omp25 [Brucella melitensis]
gi|156739576|gb|ABU93448.1| Omp25 [Brucella melitensis]
Length = 106
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G
Sbjct: 11 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 69
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 70 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 98
>gi|156739580|gb|ABU93450.1| Omp25 [Brucella canis]
Length = 105
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G
Sbjct: 10 FAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 68
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 69 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 97
>gi|156739520|gb|ABU93420.1| Omp25 [Brucella canis]
gi|156739522|gb|ABU93421.1| Omp25 [Brucella canis]
Length = 128
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-D 108
G + LY G +A + GSI FAG+N + I+YGVEGD Y+ + D
Sbjct: 2 GYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKD 61
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+ G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 62 GLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 120
>gi|156739538|gb|ABU93429.1| Omp25 [Brucella abortus]
gi|156739542|gb|ABU93431.1| Omp25 [Brucella abortus]
gi|156739562|gb|ABU93441.1| Omp25 [Brucella melitensis]
gi|156739574|gb|ABU93447.1| Omp25 [Brucella melitensis]
gi|156739596|gb|ABU93458.1| Omp25 [Brucella suis]
gi|156739600|gb|ABU93460.1| Omp25 [Brucella suis]
gi|156739604|gb|ABU93462.1| Omp25 [Brucella suis]
gi|156739616|gb|ABU93468.1| Omp25 [Brucella melitensis]
gi|156739628|gb|ABU93474.1| Omp25 [Brucella abortus]
Length = 108
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G
Sbjct: 13 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 71
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 72 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 100
>gi|156739546|gb|ABU93433.1| Omp25 [Brucella abortus]
Length = 109
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G
Sbjct: 14 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 72
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 73 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 101
>gi|222149200|ref|YP_002550157.1| outer membrane protein [Agrobacterium vitis S4]
gi|221736185|gb|ACM37148.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 91 IMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
++ GVE DV Y +N +S +G GS R R GY + D L++ G + Y
Sbjct: 92 VILGVEADVNYD---WNENNYSGVKVGMDVSGSARARAGYAI-DRALIFVAGGWTADRTY 147
Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY--SKVEGF-----YNTISL 199
+G+ G T G GV+ ++ + RLEYR + Y + G N ++L
Sbjct: 148 IKSSSGDFNKTLNGWTIGAGVDYA-ITNRIFTRLEYRYNDYGTKNISGIDFDSKQNVVNL 206
Query: 200 GVGMKF 205
G+G+KF
Sbjct: 207 GIGIKF 212
>gi|156739612|gb|ABU93466.1| Omp25 [Brucella canis]
Length = 104
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G
Sbjct: 9 FAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 67
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+Q + + +G TAG G+E
Sbjct: 68 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 96
>gi|156739524|gb|ABU93422.1| Omp25 [Brucella neotomae]
Length = 128
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-D 108
G + LY G +A + GSI FAG+N + I+YGVEGD Y+ + D
Sbjct: 2 GYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKD 61
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+ G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 62 GLEVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 120
>gi|90422419|ref|YP_530789.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
gi|90104433|gb|ABD86470.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
Length = 207
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 27/175 (15%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYNGSFGEEAHHNA- 76
SAQAAD +GG T+ Y P+ H + GPY G + Y ++G+ H++A
Sbjct: 17 SSAQAAD----LPYGGSRAPYTV----YQPLNAHSWAGPYLGGNLGY--AWGD-VHNSAT 65
Query: 77 -----GGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYE 127
G + AGYN + +YG+EGD+ T AD+ + G++R R GY
Sbjct: 66 EPSGVAGGVQAGYNWQSGQFVYGLEGDIAITG---ADDTFASWKFSNPWFGTVRGRAGYS 122
Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
D+LL+YAT G + + G T G G E GL+++ A++EY
Sbjct: 123 F-DNLLVYATGGLAFGELKGERFGQSNSSTNAGWTIGAGAEF-GLNQNWSAKVEY 175
>gi|227821981|ref|YP_002825952.1| outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340981|gb|ACP25199.1| outer membrane protein [Sinorhizobium fredii NGR234]
Length = 216
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 81 FAGYNVEDSCIMYGVEGDVRY-----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
FAGYN + + GVEGDV Y + V + + GS+R R GY +++ LLY
Sbjct: 80 FAGYNYQMGDWVVGVEGDVSYNWNDKSFTVFGASTEVGTDVSGSVRGRVGYTLNEKALLY 139
Query: 136 ATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------ 188
T G V + + + A + G T G G++ + S+ R EYR + +
Sbjct: 140 GTGGWAVTRGFVDVAGAPKEKETFNGWTIGGGIDY-AFTNSMFGRAEYRYNDFGDKDVGG 198
Query: 189 -KVEGFYNTISLGVGMKF 205
V+ + ++GVG+KF
Sbjct: 199 VDVDLDQHQFTVGVGVKF 216
>gi|87199324|ref|YP_496581.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM
12444]
gi|87135005|gb|ABD25747.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM
12444]
Length = 185
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 77 GGSIFAGYNVEDSCIMY-GVEGDVRYTVPVLADNIHSL---HGIGGSLRIRGGYEVSDSL 132
GG++FAGYN + + +Y GVE + + D+ SL + GGS + G+ SDS
Sbjct: 52 GGTVFAGYNFDLTSSVYAGVEANFDLATAKIGDDTDSLEADYAFGGSALL--GFRPSDST 109
Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
LY VG + T E + A G G+G++ L+E L R+EY + Y
Sbjct: 110 ALYGRVGYQRGRGTLTVDGTEYSDSADGLRLGLGLQA-DLTEKLGVRVEYNHTHY 163
>gi|146342874|ref|YP_001207922.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146195680|emb|CAL79707.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 214
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYN-GSFGEEAHHNAG 77
SAQAAD + GRG T+ P+ + + GPY G + Y G+ G A +G
Sbjct: 23 SAQAAD---LGYGYGRGAPYTVNQ----PLNAYSWAGPYLGGTLGYQWGTVGNSATKPSG 75
Query: 78 --GSIFAGYNVED-SCIMYGVEGDVRYT------VPVLADNIHSLHGIGGSLRIRGGYEV 128
G + AGYN ++ S + G+EGD+ + P N G+LR R GY
Sbjct: 76 LVGGVTAGYNWQNGSPWVLGIEGDINLSGANDTFAPWKFSNPWF-----GTLRGRVGYAF 130
Query: 129 SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
++ L + ET E + A+G T GVG E GL+++ A++EY
Sbjct: 131 NNILFYGTGGLALGGLRAETFGLSE-SHTAVGWTLGVGTEF-GLAQNWTAKIEY 182
>gi|256809513|gb|ACV30857.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 23/141 (16%)
Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
++S AL F +A AAD ++ P A P ++ + G Y GL Y G
Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50
Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGG 118
+A +A G+I +AG+N + +YGVEGD Y+ + D + G G
Sbjct: 51 WNKAKTDAVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKDGLEVKQGFEG 110
Query: 119 SLRIRGGYEVSDSLLLYATVG 139
SLR R GY++ + ++ Y T G
Sbjct: 111 SLRARLGYDL-NPVMPYITAG 130
>gi|190891678|ref|YP_001978220.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|218510868|ref|ZP_03508746.1| outer membrane protein [Rhizobium etli Brasil 5]
gi|190696957|gb|ACE91042.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 207
Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 45/225 (20%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL---SA 62
L + + LAL + +A AAD V+ VPT A P+ ++GPY G+ +
Sbjct: 3 LTIATAFLALVA-TTAFAADVVQD--------VPT-APVAAAPV-FTWSGPYFGIDGGAG 51
Query: 63 LYNGSF---GEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI 116
NG F G A + G +F AGYN + I+ G+EG++ + N + +
Sbjct: 52 WLNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEH-------NWNEEDAL 104
Query: 117 G--------GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGV 167
G G++R R GY D L+Y G + Y + + T G T G GV
Sbjct: 105 GADVGTDWAGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGV 163
Query: 168 EVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205
+ ++ ++ AR EYR + Y + V+ + + G+G+KF
Sbjct: 164 DF-AITNNIFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207
>gi|222102056|ref|YP_002546646.1| hypothetical protein Arad_12130 [Agrobacterium radiobacter K84]
gi|221728173|gb|ACM31182.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 205
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
GYN + I+YG+E D Y N L S R R GY + +LL
Sbjct: 78 GYNFQTGNIIYGIENDFNYNFD--KGNKADLQ-WDASGRARVGYALDRTLLFATAGLAAA 134
Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
K + G+ I IG TAG GVE L+++++ R EYR S + K +
Sbjct: 135 GGKVDAPAIGKKDDILIGWTAGAGVER-ALTDNILIRGEYRYSDFGKKD 182
>gi|27382580|ref|NP_774109.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355752|dbj|BAC52734.1| bll7469 [Bradyrhizobium japonicum USDA 110]
Length = 208
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 51 HDFNGPYAGLSALYN-GSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
+ + GPY G + Y GS +G G I AGYN ++ ++GVEGD++ A
Sbjct: 43 YSWAGPYLGGNIGYEWGSVDNNPSKPSGFVGGIQAGYNFQNGPWVFGVEGDIQ---AAGA 99
Query: 108 DNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163
D+ + G+LR R GY S+ +L Y T G + + + G T
Sbjct: 100 DDTFAPWKFSNPWFGTLRGRVGYAFSN-VLFYGTAGLAFGELRAQTFGWTESHTSAGWTI 158
Query: 164 GVGVEVGGLSESLVARLEY 182
G G EV GL+ + A+LEY
Sbjct: 159 GAGAEV-GLAPNWSAKLEY 176
>gi|256809485|gb|ACV30843.1| 25 kDa outer membrane protein [Ochrobactrum cytisi]
Length = 130
Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
++S AL F +A AAD ++ P A P ++ + G Y GL Y G
Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50
Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118
+A + G+I +AG+N + +YGVEGD Y+ D + G G
Sbjct: 51 WNKAKTDTVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 110
Query: 119 SLRIRGGYEVSDSLLLYATVG 139
SLR R GY++ + ++ Y T G
Sbjct: 111 SLRARLGYDL-NPVMPYITAG 130
>gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 221
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 51 HDFNGPYAGLSALY-----NGSFG-----EEAHHNAGGSIFAGYN--VEDSCIMYGVEGD 98
+D++G Y G +A + +G G ++ + + AGYN V S ++ G E D
Sbjct: 46 YDWSGAYIGANAGWGFLSADGKSGASGALDDDQNGVTAGVHAGYNFMVAPSVVL-GAEAD 104
Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
++Y + + + ++R R GY + D L+Y T G AG+
Sbjct: 105 IQYNDLEEKSAGVELQSDWNATVRARAGYAL-DRTLVYGTGGAAFKDLTAKSSAGKDEKT 163
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKY-----------SKVEGFYNTISLGVGMKF 205
AIG G GVE ++++L ARLEY + K + N + GV MKF
Sbjct: 164 AIGYVVGAGVE-HAVTDTLTARLEYLYQDFGDQKFDFGGTTEKTKIDENLVRAGVSMKF 221
>gi|319783284|ref|YP_004142760.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169172|gb|ADV12710.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 217
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 53 FNGPYAGLSA--------LYNGSFGEEAHHNAGGSI---FAGYNVEDSCIMYGVEGDV-- 99
+ GPYAG+ +Y A HN G + FAGYN++ I+YGVEG++
Sbjct: 34 WQGPYAGVFGAGTLEHYKIYGPGAQAGATHNVGSATVGGFAGYNLQSGKIVYGVEGELGY 93
Query: 100 RYTVPVLAD-----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA--QKYETGKAG 152
R+ D + + G+ GS++ R G ++ + + + T G A + + G
Sbjct: 94 RFKKNTFDDIPGPGVLDASTGLFGSVKGRVGMDMG-AYMPFVTAGVTAAKLKTFYPGGNA 152
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
E +GG G G++V L+ ++ R EY S + K
Sbjct: 153 ERDATLVGGVVGAGIDV-ALTHNVFLRGEYDFSFFGK 188
>gi|256809411|gb|ACV30806.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
++S AL F +A AAD ++ P A P ++ + G Y GL Y G
Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50
Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118
+A + G++ +AG+N + +YGVEGD Y+ D + G G
Sbjct: 51 WNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 110
Query: 119 SLRIRGGYEVSDSLLLYATVG 139
SLR R GY++ + ++ Y T G
Sbjct: 111 SLRARLGYDL-NPIMPYITAG 130
>gi|256809401|gb|ACV30801.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809403|gb|ACV30802.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809405|gb|ACV30803.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809407|gb|ACV30804.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809409|gb|ACV30805.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809413|gb|ACV30807.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809415|gb|ACV30808.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809417|gb|ACV30809.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809419|gb|ACV30810.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809421|gb|ACV30811.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809423|gb|ACV30812.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809425|gb|ACV30813.1| 25 kDa outer membrane protein [Ochrobactrum lupini]
gi|256809427|gb|ACV30814.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809447|gb|ACV30824.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809449|gb|ACV30825.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809451|gb|ACV30826.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809453|gb|ACV30827.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809455|gb|ACV30828.1| 25 kDa outer membrane protein [Ochrobactrum anthropi ATCC 49188]
gi|256809457|gb|ACV30829.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809459|gb|ACV30830.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809461|gb|ACV30831.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809463|gb|ACV30832.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809465|gb|ACV30833.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809467|gb|ACV30834.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809469|gb|ACV30835.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809471|gb|ACV30836.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809473|gb|ACV30837.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809475|gb|ACV30838.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809477|gb|ACV30839.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809479|gb|ACV30840.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809481|gb|ACV30841.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809483|gb|ACV30842.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809487|gb|ACV30844.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809489|gb|ACV30845.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809491|gb|ACV30846.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809493|gb|ACV30847.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809495|gb|ACV30848.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809497|gb|ACV30849.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809499|gb|ACV30850.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809501|gb|ACV30851.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809503|gb|ACV30852.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809505|gb|ACV30853.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809507|gb|ACV30854.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809509|gb|ACV30855.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809511|gb|ACV30856.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809515|gb|ACV30858.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809517|gb|ACV30859.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809523|gb|ACV30862.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809527|gb|ACV30864.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809529|gb|ACV30865.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809531|gb|ACV30866.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809533|gb|ACV30867.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809535|gb|ACV30868.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
++S AL F +A AAD ++ P A P ++ + G Y GL Y G
Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50
Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118
+A + G++ +AG+N + +YGVEGD Y+ D + G G
Sbjct: 51 WNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 110
Query: 119 SLRIRGGYEVSDSLLLYATVG 139
SLR R GY++ + ++ Y T G
Sbjct: 111 SLRARLGYDL-NPVMPYITAG 130
>gi|90419513|ref|ZP_01227423.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
gi|90336450|gb|EAS50191.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
Length = 223
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 53 FNGPYAGLSALYNGS-FGEEAHHNAGGS-----IFAGYNVEDSCIMYGVEGDV------- 99
++G YAG YN S F + + G ++ GYN + ++G+E D+
Sbjct: 49 WSGAYAGAFVGYNTSNFDQSTGASFDGDGFVGGVYTGYNWQADQFVFGLEADLGGSDVDA 108
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
T + + I GS R R G V D L++AT G A+ + + +I
Sbjct: 109 SGTNAATGAQLDADSNIFGSFRARVGVAV-DPFLVFATGGLAAARNELSLNGFSDSQTSI 167
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKY----------SKVEGF-YNTISLGVGMKF 205
G T G GVE +S+ + RLEYR S + S GF ++I G+ +KF
Sbjct: 168 GYTLGAGVEA-RVSDDVTTRLEYRYSDFGSETYDLGNTSVSSGFDEHSIRAGIALKF 223
>gi|256809429|gb|ACV30815.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809431|gb|ACV30816.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809433|gb|ACV30817.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809435|gb|ACV30818.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809437|gb|ACV30819.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809439|gb|ACV30820.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809441|gb|ACV30821.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809443|gb|ACV30822.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809445|gb|ACV30823.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809519|gb|ACV30860.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809521|gb|ACV30861.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809525|gb|ACV30863.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809539|gb|ACV30870.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 17/138 (12%)
Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL------SA 62
++S AL F +A AAD ++ P A P ++ + G Y GL +
Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGLYLGYGWNK 53
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLR 121
+ + G + +AG+N + +YGVEGD Y+ D + G GSLR
Sbjct: 54 VKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSLR 113
Query: 122 IRGGYEVSDSLLLYATVG 139
R GY++ + ++ Y T G
Sbjct: 114 ARLGYDL-NPVMPYITAG 130
>gi|218678361|ref|ZP_03526258.1| outer membrane protein [Rhizobium etli CIAT 894]
Length = 96
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 38 VPTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMY 93
+P + P++ ++ G Y G + YN GSFG + H + GG +F GYN + I+Y
Sbjct: 30 IPEAPVAQDAPVKPAGNWEGFYLGGAGTYNMGSFGSDRHTYGFGGQVFTGYNWQQGQIVY 89
Query: 94 GVEGDV 99
GVE D+
Sbjct: 90 GVESDL 95
>gi|150395644|ref|YP_001326111.1| porin [Sinorhizobium medicae WSM419]
gi|150027159|gb|ABR59276.1| porin [Sinorhizobium medicae WSM419]
Length = 225
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 83/207 (40%), Gaps = 42/207 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG- 59
M++ FL+ + AL+ +A A PV P I+ P D+NG Y G
Sbjct: 1 MKRYFLSAAFLAGALSPVVAADLA-PVESP--------PAIS----APAAFDWNGFYLGG 47
Query: 60 --------LSALYNGSFGEEAHHNAG---GSIFAGYNVEDSCIMYGVEGDV-------RY 101
+ Y FGE AHH+ G + AGYN + + G E D
Sbjct: 48 NVGGGRADVDWTYQ-PFGETAHHDGKGFLGGVQAGYNWQIDGFVIGAEADFLGSSIDGDT 106
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE------TGKAGEIT 155
P A + S ++R R GY D+LL+YAT G + ++E G +G
Sbjct: 107 PCPNPAYSCTSDTKWLSTVRARAGYSF-DNLLVYATGGLGIG-RFEIKTDDGAGTSGSTI 164
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY 182
G AG GVE G S + + EY
Sbjct: 165 RNDTGWVAGAGVEY-GFSPNWSIKAEY 190
>gi|327189607|gb|EGE56759.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 207
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 53 FNGPYAGL---SALYNGSF---GEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTV 103
++GPY G+ + NG F G A + G +F AGYN + I+ G+EG++ +
Sbjct: 39 WSGPYFGIDGGAGWLNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNW 98
Query: 104 ---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAI 159
L ++ + G++R R GY D L+Y G + Y + + T
Sbjct: 99 NEEDALGADVGT--DWAGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFN 155
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205
G T G GV+ ++ ++ AR EYR + Y + V+ + + G+G+KF
Sbjct: 156 GYTVGAGVDF-AITNNIFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207
>gi|328542837|ref|YP_004302946.1| OmpA-like transmembrane domain [polymorphum gilvum SL003B-26A1]
gi|326412583|gb|ADZ69646.1| OmpA-like transmembrane domain, putative [Polymorphum gilvum
SL003B-26A1]
Length = 223
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 3 KLFLAVGVSSLALA-SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG-- 59
K A GVS LA + A AAD + A P I N+ R D++G Y G
Sbjct: 2 KSLAAAGVSIAVLAGASLPAFAADLPQPAQ-------PVIYDNQVSSARFDWSGFYFGGN 54
Query: 60 ---------LSALYNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYGVEGDVRYTVPVLADN 109
++ G F +A GG + AGYN I+ G+E D + + +
Sbjct: 55 LGWGWGQFTTNSALTGRFNSDASGVNGG-VHAGYNHAITPNIIAGLEADFQLSD---LEK 110
Query: 110 IHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161
S+ G+G ++R R GY D ++Y T G +A + AIG
Sbjct: 111 RRSVAGVGVKTSSDWNSTIRGRLGYAF-DRFMIYGTGGLAIADLEVAAAGSKGNETAIGW 169
Query: 162 TAGVGVEVGGLSESLVARLEY 182
T G G+E G +++++ ARLEY
Sbjct: 170 TLGAGIE-GAVTDNVTARLEY 189
>gi|148253259|ref|YP_001237844.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405432|gb|ABQ33938.1| putative outer membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 206
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYN-GSFGEEAHHNA 76
SAQAAD + GR T+ P+ + + GPY G + Y GS G +
Sbjct: 17 VSAQAAD-----FNYGRQAPYTVNQ----PLNAYSWAGPYLGGTLGYEWGSVGNNPTKPS 67
Query: 77 G--GSIFAGYNVEDSCIMYGVEGDVRYT------VPVLADNIHSLHGIGGSLRIRGGYEV 128
G G + AGYN ++ ++G EGD+ T P N G++R R GY
Sbjct: 68 GLVGGLTAGYNWQNGPWVFGAEGDINLTGANDTFAPWKFSNPWF-----GTVRGRAGYAF 122
Query: 129 SDSLLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+++L Y T G + ET E + ++G T G G E GL+++ A++EY
Sbjct: 123 -NNILFYGTGGLAFGGLRGETFGLSE-SHTSLGWTLGAGAEF-GLAQNWTAKIEY 174
>gi|256809537|gb|ACV30869.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLAD 108
G + LY G +A + G++ +AG+N + +YGVEGD Y+ D
Sbjct: 41 GYTGLYLGYGWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKD 100
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
+ G GSLR R GY++ + ++ Y T G
Sbjct: 101 GLEVKQGFEGSLRARLGYDL-NPVMPYITAG 130
>gi|91975762|ref|YP_568421.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91682218|gb|ABE38520.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 207
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133
G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D LL
Sbjct: 72 GGVQGGYNWQSGNIVFGLEGDIQFST---ADDTFAPYKFSNPWFGTARGRVGYAMND-LL 127
Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+YAT G Q + + G T G G E + L A++EY
Sbjct: 128 IYATGGFAFGQLKGERLLSTESHSSAGWTVGAGAEF-AFAPKLSAKVEY 175
>gi|182677110|ref|YP_001831256.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
gi|182632993|gb|ACB93767.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
Length = 244
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 83 GYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
G+N + S + G EGDV + PV + S + GSLR R G D +L+Y
Sbjct: 84 GFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTSRIPVDGSLRGRIG-AAWDRVLVY 142
Query: 136 ATVGPDVAQKYE-------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
AT G A + +T +G T G GVE ++++ R++YR + Y
Sbjct: 143 ATGGAAFASIKHGYIGSSLVPGSATLTNDRVGWTVGGGVEY-AMTDNWSVRVDYRYTDYG 201
Query: 189 KVEGFYNTISL 199
+ F TI++
Sbjct: 202 NISDFPGTITV 212
>gi|218461202|ref|ZP_03501293.1| outer membrane protein [Rhizobium etli Kim 5]
gi|218658675|ref|ZP_03514605.1| outer membrane protein [Rhizobium etli IE4771]
Length = 207
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 53 FNGPYAGL---SALYNGSF---GEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTV 103
++GPY G+ +A NG F G A + G +F AGYN + + G+EG++ +
Sbjct: 39 WSGPYFGIDGGAAWLNGDFSAGGASASEDFNGGVFGGFAGYNFQFDNFVVGIEGNLEH-- 96
Query: 104 PVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEI 154
N + +G G++R R GY D L+Y G + Y + +
Sbjct: 97 -----NWNEEDALGAEVGTDWAGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKE 150
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205
T G T G GV+ ++ ++ AR EYR + Y + V+ + + G+G+KF
Sbjct: 151 TETFNGYTVGAGVDF-AITNNIFARGEYRYNDYGEQDILGVDVDLDQHELKFGIGVKF 207
>gi|316932716|ref|YP_004107698.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600430|gb|ADU42965.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris DX-1]
Length = 207
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133
G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D +L
Sbjct: 72 GGLQGGYNWQSGNIVFGLEGDIQFST---ADDTFAPYKFSNPWFGTGRGRIGYAMND-VL 127
Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+YAT G Q A + + G T G G E + L A++EY
Sbjct: 128 IYATGGLAFGQLKGQNLAVSESHSSAGWTVGAGAEF-AFAPKLSAKVEY 175
>gi|192289773|ref|YP_001990378.1| outer-membrane immunogenic protein precursor [Rhodopseudomonas
palustris TIE-1]
gi|192283522|gb|ACE99902.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris TIE-1]
Length = 207
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133
G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D +L
Sbjct: 72 GGVQGGYNWQSGNIVFGLEGDIQFST---ADDTFAQYKFSNPWFGTGRGRIGYAMND-VL 127
Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+YAT G Q + + G T G G E + L A++EY
Sbjct: 128 IYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAPKLSAKVEY 175
>gi|86748303|ref|YP_484799.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86571331|gb|ABD05888.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 207
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133
G + GYN + I++G+EGD++++ A++ + + G+ R R GY ++D +L
Sbjct: 72 GGVQGGYNWQSGNIVFGLEGDIQFST---ANDTFASYKFSNPWFGTARGRVGYAMND-IL 127
Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
LYAT G Q + + G T G G E + L A++EY
Sbjct: 128 LYATGGLAFGQLKGEYLLSSESHTSAGWTVGAGAEF-AFAPKLSAKVEY 175
>gi|153007478|ref|YP_001368693.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151559366|gb|ABS12864.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 67 SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT-----VPVLADNI-----HSLHG 115
SFG G I+AGYN + + I+ G++GDV Y + V + ++ +
Sbjct: 66 SFGNVKPDGFLGGIYAGYNFDLGNSIVLGIDGDVTYNDVSKDIDVYSGDLAVGDFETKLR 125
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI-----TPIAIGGTAGVGVEVG 170
G++R R GY V D + Y G +G I + G TAG GV+
Sbjct: 126 WSGAVRARVGYAV-DRFMPYLAGGVAFGNIKNSGSIDGIGSFSESKTLTGWTAGAGVDYA 184
Query: 171 GLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205
+++L+ RLEYR + Y + + N + LGV KF
Sbjct: 185 A-TDNLIVRLEYRYTDYGDKDIEFGGLNVNQDFKTNEVRLGVAYKF 229
>gi|39934247|ref|NP_946523.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39648095|emb|CAE26615.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 226
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133
G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D +L
Sbjct: 91 GGVQGGYNWQSGNIVFGLEGDIQFST---ADDTFAQYKFSNPWFGTGRGRIGYAMND-VL 146
Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+YAT G Q + + G T G G E + L A++EY
Sbjct: 147 IYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAPKLSAKVEY 194
>gi|85716040|ref|ZP_01047017.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
gi|85697238|gb|EAQ35119.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
Length = 206
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAG 59
M K +A + + A +AQAAD RA + N+ P+ + GPY G
Sbjct: 1 MSKTLIAALATMASTALIGTAQAADFSYRAPY---------TVNQ--PLNAFSWAGPYLG 49
Query: 60 LSALYN-GSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI 116
+ Y GS G G + AGYN + +++G+EGD++ A++ +
Sbjct: 50 GNLGYAWGSVQNSLTKPDGVFGGVQAGYNWQSGSMVFGLEGDIQANA---ANDTFAAWKF 106
Query: 117 G----GSLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGG 171
G++R R GY S+ +L+Y T G + + ET E + G T GVG EV G
Sbjct: 107 SNPWFGTVRGRLGYAFSN-VLVYGTGGLAFGKLRAETFALSE-SHTNAGWTVGVGAEV-G 163
Query: 172 LSESLVARLEY 182
+ ++ A++EY
Sbjct: 164 IYQNWTAKVEY 174
>gi|92118614|ref|YP_578343.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
gi|91801508|gb|ABE63883.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
Length = 206
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALY-NGSFGEEAHHNAG 77
+AQAAD R+ + N+ P+ + + GPY G + Y GS A G
Sbjct: 20 TAQAADFSYRSPY---------TVNQ--PLNAYSWAGPYLGGNLGYAWGSVQNSATKPNG 68
Query: 78 --GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDS 131
G + AGYN + +++G+EGD++ AD+I + G++R R GY ++
Sbjct: 69 VFGGVQAGYNWQSGPLVFGLEGDIQANA---ADDIFARWKFSNPWFGTVRGRLGYAF-NN 124
Query: 132 LLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+L+Y T G A + ET E + G T GVG E G+ ++ A++EY
Sbjct: 125 VLIYGTGGLAFGALRAETFGLSE-SHTNAGWTVGVGAEF-GIYQNWTAKVEY 174
>gi|241518381|ref|YP_002979009.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862794|gb|ACS60458.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 207
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Query: 53 FNGPYAGL---SALYNGSF---GEEAHHNAGGSIFAG---YNVEDSCIMYGVEGDVRYTV 103
++GPY G+ + NG F G A + G IF G YN + I+ G+EG++ +
Sbjct: 39 WSGPYLGIDGGAGWLNGDFSAGGASASEDFNGGIFGGFVGYNFQFDNIVVGIEGNLEH-- 96
Query: 104 PVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEI 154
N + +G G++R R GY D L+Y G + Y + +
Sbjct: 97 -----NWNEEEALGADVGTDWTGAVRGRVGYAF-DKALIYGAAGWTATRGYVDLPGLDKE 150
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205
T G T G G++ ++ ++ AR EYR + + + V+ + + G+G+KF
Sbjct: 151 TETFNGYTVGAGLDF-AITNNIFARGEYRYNDFGEKDVLGVDVDLDQHELKFGIGVKF 207
>gi|218517219|ref|ZP_03514059.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 153
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
FAGYN + I+ G+EG++ Y L ++ + G++R R GY D L+Y
Sbjct: 22 FAGYNFQFDNIVVGIEGNLEYNWNEEEALGADVGT--DWAGAVRGRVGYAF-DKALIYGA 78
Query: 138 VGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------- 189
G + Y + + T G T G GV+ ++ ++ AR EYR + Y +
Sbjct: 79 AGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNNIFARGEYRYNDYGERDILGVD 137
Query: 190 VEGFYNTISLGVGMKF 205
V+ + + G+G+KF
Sbjct: 138 VDLDQHELKFGIGVKF 153
>gi|153011627|ref|YP_001372841.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151563515|gb|ABS17012.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 228
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 36/160 (22%)
Query: 78 GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHG-----------IGGSLRIRGG 125
G ++AGYN + + + GV+GD+ Y L DN + G G++R R G
Sbjct: 73 GGLYAGYNFDVGNNFILGVDGDITYNN--LKDNYSATDGDIAGDLESKLRWSGAVRARAG 130
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGE-ITPIAI-------GGTAGVGVEVGGLSESLV 177
D + Y G T A + + I++ G TAG GV+ +++L+
Sbjct: 131 VAF-DRFMPYIAGGVAFGSVKNTLSATDGVDEISVSQSKTYTGWTAGAGVDYAA-TDNLI 188
Query: 178 ARLEYRASKYSK----------VEGFYNT--ISLGVGMKF 205
RLEYR + Y K VE + T + LGV KF
Sbjct: 189 LRLEYRYTDYGKKDFDFGTDVSVEDKFKTHDVRLGVAYKF 228
>gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2]
gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2]
Length = 255
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-----------VP---VLADNIHS 112
+FG + GG+ GYN++ + + G+EG V T VP V N+H+
Sbjct: 71 NFGNSGNGVIGGA-HVGYNLQLNQFVVGLEGSVDGTSLSKTYSGTAFVPGFGVAGINLHT 129
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--GGTAGVGVEVG 170
I GS+R R GY D +L+YAT G A KA TP + T VG VG
Sbjct: 130 SADIQGSIRGRVGYAW-DRVLVYATGGVAFAGV----KASLSTPFSYDSSSTTKVGWTVG 184
Query: 171 G-----LSESLVARLEYRASKY 187
G ++ + R EYR S +
Sbjct: 185 GGLEYAVTNNWSIRAEYRYSNF 206
>gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380]
Length = 373
Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ VS LALAS AQAA A+ G + + + FN Y+
Sbjct: 1 MKKTVIALAVSGLALASV--AQAAPQQNTAYAGAK-----VGWASFHEGVRQFNDKYSN- 52
Query: 61 SALYNG---SFGEEAHHNAGGSIFAGYNVEDSC-------IMYGVEGDVRYTVPVLADNI 110
A YN ++G + G +F GY + + + Y G VR V +
Sbjct: 53 DARYNSDTTAYGINRNSVTYG-VFGGYQILNQNNFGLAAELGYDYYGRVRGNVGDFREFK 111
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEIT----PIAIGGT 162
HS HG+ + ++ YEV +L +Y VG V + Y E T +
Sbjct: 112 HSAHGL--NFALKPSYEVLPNLDVYGKVGVAVVRNDYKFYGAENTNEPTEKFHKLKASTI 169
Query: 163 AGVGVEVGGLSESLVARLEYR 183
G GVE L E L AR+EY+
Sbjct: 170 LGAGVEYAILPE-LAARIEYQ 189
>gi|194228056|ref|XP_001914937.1| PREDICTED: similar to Gene model 784, (NCBI) [Equus caballus]
Length = 1407
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 18/123 (14%)
Query: 14 ALASFCSAQAADPVRRAHHGGRGVVPTIAT-NRYVPIRHDFNG--PYAGLSALYNGSFGE 70
A FC QA + V GG G+V T AT VP+ H+ P S+ + E
Sbjct: 1028 ATTYFCRVQAVNTVGVGMFGGTGIVTTPATVPAVVPMLHEVENKVPAKLASSCIAIEWEE 1087
Query: 71 EAHHNAGGSIFAGYNVE------------DSCIMYGVEGDVRYTVPVLADNIHSLHGIGG 118
H GS GYNVE C++ ++ D Y + + A N + L
Sbjct: 1088 PDCH---GSPITGYNVEYGDRKLLTVDRVTECLLKNLQPDTTYKIRIQAINHYGLSPFSQ 1144
Query: 119 SLR 121
S+R
Sbjct: 1145 SIR 1147
>gi|86749266|ref|YP_485762.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572294|gb|ABD06851.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 274
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 27/138 (19%)
Query: 68 FGEEAHHNAGGSIFAG----YNVEDSCIMYGVEGDVRYT------------VPVLADNIH 111
FG + + +GG FAG YN + +++G+EGD + P L D
Sbjct: 96 FGSQKYDTSGG--FAGGVVGYNWQSGAVVFGLEGDYHWADINGTSSVINVGPPNLGDTYS 153
Query: 112 S-LHGIGGSLRIRGGYEVSDSLLLY---ATVGPDVAQKYETGKAGEI--TPIAIGGTAGV 165
+ L G G ++ R GY +L A VG D+ +Y+ G A G T G
Sbjct: 154 TKLRGF-GDIKGRLGYAAGPALWFVSGGAAVG-DLQHRYDGGAANTFVQNKTKWGYTVGA 211
Query: 166 GVEVGGLSESLVARLEYR 183
GVE + S A+LEY
Sbjct: 212 GVEY-MFAPSWSAKLEYN 228
>gi|119476867|ref|ZP_01617148.1| Anaerobic dehydrogenase, typically selenocysteine-containing
[marine gamma proteobacterium HTCC2143]
gi|119449674|gb|EAW30911.1| Anaerobic dehydrogenase, typically selenocysteine-containing
[marine gamma proteobacterium HTCC2143]
Length = 887
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 148 TGKAGEIT--PIAIGG--TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT--ISLGV 201
TGK G++ P +I G A G EVGGL+ L A ++Y + V F+N+ +S V
Sbjct: 314 TGKLGKVGAGPFSITGQPNAMGGREVGGLANMLAAHMDYTPDNIATVSEFWNSTAVSQQV 373
Query: 202 GMK 204
G+K
Sbjct: 374 GLK 376
>gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi]
gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 78/210 (37%), Gaps = 36/210 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH---DFNGPY 57
M+K +A+ V+ A+AS +A A+ G + H FN Y
Sbjct: 1 MKKSLVALAVAGFAVASANAAPEANSFYVGAKAG-----------WATFHHGVNQFNSKY 49
Query: 58 AGLSALYNGSFGEEAHHNAGG-SIFAGYNVEDSCIM---YGVEGDVRYTV---PVLADNI 110
A +G + N+ +F GY + D+ + Y G VR V D
Sbjct: 50 ANDERYSDGPTAYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGRVRGNVGDRRAFKDTK 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGP-----DVAQKYETGKAGEITPIAIGGTAGV 165
H H + ++ YEV L LY VG D Y G + + G
Sbjct: 110 HGAH-----ISLKPSYEVVSGLDLYGKVGAALVRNDYKDYYANGTKDKSHNLKTSLILGA 164
Query: 166 GVEVGGLSESLVARLEY----RASKYSKVE 191
GVE ++ +L ARLEY RA Y K E
Sbjct: 165 GVEY-AITPALAARLEYQWLSRAGNYGKAE 193
>gi|75676711|ref|YP_319132.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
gi|74421581|gb|ABA05780.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
Length = 206
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133
G + AG+N + +++G+EGD++ A++ + G++R R GY +++L
Sbjct: 71 GGVQAGFNWQSGPVVFGLEGDIQANA---ANDTFAAWKFSNPWFGTVRGRIGYAF-NNVL 126
Query: 134 LYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+Y T G + + ET E + + G T GVG EV G+ ++ A++EY
Sbjct: 127 VYGTGGLAFGKLRAETFGLSE-SHTSAGWTVGVGAEV-GIYQNWTAKVEY 174
>gi|115522948|ref|YP_779859.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115516895|gb|ABJ04879.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 207
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYNGSFGEEAHHNAG 77
SAQAAD GR P P+ + + GPY G + Y ++G+ H+N+
Sbjct: 17 VSAQAADLSY-----GRSYAPYTVNQ---PLNAYSWAGPYLGGNLGY--AWGD-IHNNSA 65
Query: 78 ------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYE 127
G I GYN + ++YG+EGD++ T A++ + + G++R R GY
Sbjct: 66 KPSGLSGGIQGGYNWQSGQMVYGLEGDLQITG---ANDTFAQYKFSNPWFGTVRGRIGYA 122
Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITP--IAIGGTAGVGVEVGGLSESLVARLEY 182
++++ Y T G +A T + G ++ G T G G E GL + A++EY
Sbjct: 123 F-NNVMFYGTGG--LAYGELTAEMGGLSQSHTNAGFTVGAGAEF-GLMPNWTAKIEY 175
>gi|296104524|ref|YP_003614670.1| putative outer membrane protein A [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058983|gb|ADF63721.1| putative outer membrane protein A [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 204
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 26/124 (20%)
Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS----LHGIGGSLRIRGGYEV 128
H N GG ++AGY + +EG Y + HS + G + ++ Y V
Sbjct: 62 HDNVGGGVYAGYQM---TPWLALEGGYDYLGNMQIKGKHSAGAQMKSQGLQMSLKASYAV 118
Query: 129 SDSLLLYATVG-------PDVA--QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
+DS +Y G DV+ ++ETG + P+ A VG E +++L R
Sbjct: 119 TDSWDIYGRAGAMAYRAESDVSGHNRFETG----VRPL-----AAVGTEY-AFNKNLAGR 168
Query: 180 LEYR 183
LEY+
Sbjct: 169 LEYQ 172
>gi|254470997|ref|ZP_05084400.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960139|gb|EEA95336.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 201
Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGS----------IFAGYNVEDSCIMYGVEGDV--- 99
++G Y GL G FG+ + GS F GYN I+ GVE D+
Sbjct: 28 WDGFYLGL----KGGFGQLTGKDTLGSKGTLDSGVVGAFGGYNHSFDRIVVGVEADLNAT 83
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----KYETGKAGEIT 155
YT + S S +R GY+ L Y + G +A+ ++ G+ E T
Sbjct: 84 NYTSVSDSGVSRSRSKWNTSATVRLGYDAG-MFLPYLSAGVGLAEYEVKRFADGQKSENT 142
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------VEGFYNTISLGVGM 203
I + G G+E ++E++ ARL+Y+ + SK +EG + ++LGV
Sbjct: 143 HIGL--VVGAGLEA-MITENVSARLDYKHMEMSKEKYKFQGFNAFHIEGRQDLVTLGVAY 199
Query: 204 KF 205
F
Sbjct: 200 NF 201
>gi|217977073|ref|YP_002361220.1| porin [Methylocella silvestris BL2]
gi|217502449|gb|ACK49858.1| porin [Methylocella silvestris BL2]
Length = 239
Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 83 GYNVEDSCIMYGVEGDVRYT----VPVLADNIHSLH-GIGGSLRIRGGYEVSDSLLLYAT 137
GYN++ + I+ G+EGDV T +++ + GS+R R G+ V D L Y T
Sbjct: 85 GYNLQFNQIVLGLEGDVEATGVDKTYAFGPTVYTTQIPVQGSIRARFGFAV-DRALFYVT 143
Query: 138 VG---PDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
G V +Y++ + G T G G+E L+ + R EYR S +
Sbjct: 144 GGAAFASVTNQYQSYLGYNSLNRSFAGWTIGGGLEY-ALTNNWSVRAEYRYSDF 196
Searching..................................................done
Results from round 2
>gi|254780598|ref|YP_003065011.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040275|gb|ACT57071.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 205
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL
Sbjct: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL
Sbjct: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL
Sbjct: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
Query: 181 EYRASKYSKVEGFYNTISLGVGMKF 205
EYRASKYSKVEGFYNTISLGVGMKF
Sbjct: 181 EYRASKYSKVEGFYNTISLGVGMKF 205
>gi|294852064|ref|ZP_06792737.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294820653|gb|EFG37652.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 305
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 259
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305
>gi|297248070|ref|ZP_06931788.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
gi|297175239|gb|EFH34586.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
Length = 305
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 259
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305
>gi|189023912|ref|YP_001934680.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225627199|ref|ZP_03785237.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237815152|ref|ZP_04594150.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260566721|ref|ZP_05837191.1| outer membrane protein [Brucella suis bv. 4 str. 40]
gi|189019484|gb|ACD72206.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225618034|gb|EEH15078.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789989|gb|EEP64199.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260156239|gb|EEW91319.1| outer membrane protein [Brucella suis bv. 4 str. 40]
Length = 305
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 259
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305
>gi|148560659|ref|YP_001258682.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
gi|3914204|sp|Q45335|OM25_BRUO2 RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457929|gb|AAB06702.1| 25 kDa outer membrane protein [Brucella ovis]
gi|148371916|gb|ABQ61895.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
Length = 201
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEG+ Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKLDTQD-IRVGIGYKF 201
>gi|239831535|ref|ZP_04679864.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
gi|239823802|gb|EEQ95370.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
Length = 266
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V S+ L +A AAD ++ P + + ++ + G Y GL
Sbjct: 54 MRTLKSLVIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL 105
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLADN-I 110
Y G + N GSI +AG+N + +YGVEGD Y+ + N +
Sbjct: 106 ---YLGYGWNKVKTNTDGSIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKNGL 162
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G Q + + +G TAG G+E
Sbjct: 163 EVKEGFEGSLRGRLGYDL-NPVMPYITAGVAGKQVKLDNGFDDESKFRVGWTAGAGLEA- 220
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR +++ + + I +GVG KF
Sbjct: 221 KLTDNILGRVEYRYTQFGNKTYDLGTESVRNKLDTHDIRVGVGYKF 266
>gi|254718838|ref|ZP_05180649.1| OmpA-like transmembrane domain protein [Brucella sp. 83/13]
gi|265983822|ref|ZP_06096557.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838760|ref|ZP_07471594.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
gi|306843662|ref|ZP_07476262.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|206596726|emb|CAQ68393.1| outer membrane protein 25 [Brucella sp. BO1]
gi|264662414|gb|EEZ32675.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306275972|gb|EFM57681.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|306406162|gb|EFM62407.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
Length = 213
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTNVRNKLDTQDIRVGIGYKF 213
>gi|23501588|ref|NP_697715.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|62289663|ref|YP_221456.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82699590|ref|YP_414164.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|163842972|ref|YP_001627376.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|254688973|ref|ZP_05152227.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 6 str.
870]
gi|254697107|ref|ZP_05158935.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254701484|ref|ZP_05163312.1| OmpA-like transmembrane domain protein [Brucella suis bv. 5 str.
513]
gi|254704031|ref|ZP_05165859.1| OmpA-like transmembrane domain protein [Brucella suis bv. 3 str.
686]
gi|254707067|ref|ZP_05168895.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M163/99/10]
gi|254709823|ref|ZP_05171634.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
B2/94]
gi|254713826|ref|ZP_05175637.1| OmpA-like transmembrane domain protein [Brucella ceti M644/93/1]
gi|254717116|ref|ZP_05178927.1| OmpA-like transmembrane domain protein [Brucella ceti M13/05/1]
gi|254730003|ref|ZP_05188581.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 4 str.
292]
gi|256031313|ref|ZP_05444927.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M292/94/1]
gi|256159433|ref|ZP_05457205.1| OmpA-like transmembrane domain protein [Brucella ceti M490/95/1]
gi|256254721|ref|ZP_05460257.1| OmpA-like transmembrane domain protein [Brucella ceti B1/94]
gi|256257221|ref|ZP_05462757.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 9 str.
C68]
gi|256369135|ref|YP_003106643.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260168451|ref|ZP_05755262.1| OmpA-like transmembrane domain protein [Brucella sp. F5/99]
gi|260545586|ref|ZP_05821327.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260754463|ref|ZP_05866811.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260757682|ref|ZP_05870030.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260761509|ref|ZP_05873852.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883492|ref|ZP_05895106.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|261218931|ref|ZP_05933212.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261221901|ref|ZP_05936182.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261314536|ref|ZP_05953733.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261317361|ref|ZP_05956558.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261321570|ref|ZP_05960767.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261752028|ref|ZP_05995737.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261754686|ref|ZP_05998395.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261757914|ref|ZP_06001623.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265988399|ref|ZP_06100956.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265997865|ref|ZP_06110422.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|3914205|sp|Q45689|OM25_BRUSU RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|68067868|sp|Q44664|OM25_BRUAB RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457937|gb|AAB36695.1| 25 kDa outer membrane protein [Brucella suis 1330]
gi|23347502|gb|AAN29630.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|46251178|gb|AAS84560.1| Omp25 [Brucella ceti]
gi|46251180|gb|AAS84561.1| Omp25 [Brucella ceti]
gi|46251182|gb|AAS84562.1| Omp25 [Brucella pinnipedialis]
gi|46251184|gb|AAS84563.1| Omp25 [Brucella ceti]
gi|62195795|gb|AAX74095.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82615691|emb|CAJ10678.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|157310307|emb|CAN43865.1| outer membrane protein 25 [Brucella microti CCM 4915]
gi|157310309|emb|CAN43866.1| outer membrane protein 25 [Brucella microti]
gi|163673695|gb|ABY37806.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|255999295|gb|ACU47694.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260096993|gb|EEW80868.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260668000|gb|EEX54940.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260671941|gb|EEX58762.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674571|gb|EEX61392.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260873020|gb|EEX80089.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|260920485|gb|EEX87138.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260924020|gb|EEX90588.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261294260|gb|EEX97756.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261296584|gb|EEY00081.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261303562|gb|EEY07059.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261737898|gb|EEY25894.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261741781|gb|EEY29707.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261744439|gb|EEY32365.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262552333|gb|EEZ08323.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|264660596|gb|EEZ30857.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 213
Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|254693454|ref|ZP_05155282.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 3 str.
Tulya]
gi|261213709|ref|ZP_05927990.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915316|gb|EEX82177.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 213
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRTKLDTQDIRVGIGYKF 213
>gi|306842032|ref|ZP_07474705.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
gi|306287873|gb|EFM59293.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
Length = 213
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGLGYKF 213
>gi|161618670|ref|YP_001592557.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
gi|161335481|gb|ABX61786.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
Length = 213
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|17987532|ref|NP_540166.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225852222|ref|YP_002732455.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis ATCC 23457]
gi|256044394|ref|ZP_05447298.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 1
str. Rev.1]
gi|256264270|ref|ZP_05466802.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|260563745|ref|ZP_05834231.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|265990813|ref|ZP_06103370.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|3914202|sp|Q45321|OM25_BRUME RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457927|gb|AAB06701.1| 25 kDa outer membrane protein [Brucella melitensis]
gi|17983234|gb|AAL52430.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225640587|gb|ACO00501.1| OmpA-like transmembrane domain protein [Brucella melitensis ATCC
23457]
gi|260153761|gb|EEW88853.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|263001597|gb|EEZ14172.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094531|gb|EEZ18340.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|326408721|gb|ADZ65786.1| OmpA-like transmembrane domain protein [Brucella melitensis M28]
gi|326538444|gb|ADZ86659.1| OmpA-like transmembrane domain protein [Brucella melitensis M5-90]
Length = 213
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF 213
>gi|256113236|ref|ZP_05454104.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 3
str. Ether]
gi|265994648|ref|ZP_06107205.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765761|gb|EEZ11550.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
Length = 213
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF 213
>gi|3914201|sp|Q45110|OM25_BRUCA RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457931|gb|AAB36692.1| 25 kDa outer membrane protein [Brucella canis]
Length = 213
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDGESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++YS + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYSNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|256060827|ref|ZP_05450987.1| OmpA-like transmembrane domain protein [Brucella neotomae 5K33]
gi|261324818|ref|ZP_05964015.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
gi|3914203|sp|Q45326|OM25_BRUNE RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457935|gb|AAB36694.1| 25 kDa outer membrane protein [Brucella neotomae]
gi|261300798|gb|EEY04295.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
Length = 213
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|153009914|ref|YP_001371129.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151561802|gb|ABS15300.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 213
Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V S+ L +A AAD ++ P + + ++ + G Y GL
Sbjct: 1 MRTLKSLVIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + G++ +AG+N + +YGVEGD Y+ D +
Sbjct: 53 ---YLGYGWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLRARLGYDL-NPVMPYITAGVAGSQVKLDNGFDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR +++ + + I +GVG KF
Sbjct: 168 KLTDNILGRVEYRYTQFGNKTYDLGNESVRNKLDTHDIRVGVGYKF 213
>gi|769745|emb|CAA55872.1| immunogenic protein [Brucella abortus]
gi|89741444|gb|ABD77595.1| 25 kDa outer membrane protein [Brucella abortus]
Length = 213
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL
Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52
Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSL R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EVKQGFEGSLGARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
L+++++ R+EYR ++Y + I +G+G KF
Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|327193361|gb|EGE60264.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 211
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S+ A+A AQAAD V + +A + V ++ G Y G
Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTNYGYTVGAGVEA-FVTNNIT 172
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
RLEYR + Y + N++ LG+G+KF
Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|190891163|ref|YP_001977705.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190696442|gb|ACE90527.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 211
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S+ A+A AQAAD V + +A + V ++ G Y G
Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY++ + LLY T G + + + + A G T G GVE ++ ++
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNNIT 172
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
RLEYR + Y + N++ LG+G+KF
Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor
gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248]
Length = 211
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S A+A +AQAAD V + +A V + G Y G
Sbjct: 1 MRVLIAGLMASVFAIAGVSAAQAADRVDQVPEA------PVAQEAPVKPAGSWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNNIT 172
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
RLEYR + Y + N++ LG+G+KF
Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 210
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 23/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + VS+ A+ F +A AAD V + P ++++G Y G
Sbjct: 1 MRTLIKTLMVSAFAIGGFNAAYAADAVEQIPQ-------PPVAQEAAPAINNWSGFYIGG 53
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ +N G F + + GG F GYN + I+YGVE D+ Y + + + +G+
Sbjct: 54 AGDWNKGHFSRNGNGYGFGGEAFTGYNWQQGQIVYGVEADLGYAGIDSTRNGLTAKNGVN 113
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY+ + +LY T G + Q + + A+G T G G E ++ ++
Sbjct: 114 GSVRGRLGYDF-NPFMLYGTAGLAIGQNKLSDDTSSDSKTAVGYTVGAGAET-FITNNVT 171
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
ARLEYR + Y K ++ +G+G+KF
Sbjct: 172 ARLEYRYTDYGKKNFDLDSGNFSRGYDEQSVKVGIGVKF 210
>gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 211
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S A+A +AQAAD V + +A + V ++ G Y G
Sbjct: 1 MRVLIAGLMASVFAIAGLSAAQAADAVDQIPEA------PVAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNNIT 172
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
RLEYR + Y + N++ LG+G+KF
Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56]
Length = 211
Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 22/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S+ A+A +AQAAD V + IA + V ++ G Y G
Sbjct: 1 MRVLIAGLMASAFAIAGVSAAQAADAVDQVPEA------PIAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY++ + LLY T G + + + + A G T G GVE ++ ++
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKTAYGYTVGAGVEA-FVTNNIT 172
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
RLEYR + Y + N++ LG+G+KF
Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae]
Length = 211
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S A+A +AQAAD V + +A V ++ G Y G
Sbjct: 1 MRVLIAGLMASVFAIAGVSAAQAADAVDQVPEA------PVAQEAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNNIT 172
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
RLEYR + Y + N++ LG+G+KF
Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|209548691|ref|YP_002280608.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534447|gb|ACI54382.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 211
Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP--IRHDFNGPYA 58
M+ L + S A+A +A +P + P + G Y
Sbjct: 1 MRVLIAGLMASVFAIAGISAA--------QAADAVDQIPEAPVAQEAPVKPAGSWEGFYL 52
Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHG 115
G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GS+R R GY++ + LLY T G + + + + G T G GVE ++ +
Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVGAGVEA-FVTNN 170
Query: 176 LVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
+ RLEYR + Y + N++ LG+G+KF
Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|86357119|ref|YP_469011.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86281221|gb|ABC90284.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 211
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S+ A+A +AQAAD V + +A + V ++ G Y G
Sbjct: 1 MRVLIAGLMASAFAIAGVSAAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVGAGVEA-FVTNNIT 172
Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
RLEYR + Y + N++ LG+G+KF
Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211
>gi|260469600|ref|ZP_05813765.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|259028626|gb|EEW29937.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
Length = 217
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
LAV + AL +A AAD V+ P + GPYAG++ Y
Sbjct: 11 LAVALGLFALGG--TAYAADVVQEE--------PPAPAPVAELPVASWAGPYAGINLGYG 60
Query: 66 GSFGEEAHH--------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116
S + GS+F GY + +YG E ++ Y DN +HS G
Sbjct: 61 FSGRTKEKDLGFETDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGVHSKGGF 120
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GSLR R GY V+ +LLY T G + K E G T +G TAG+G ++ L+++
Sbjct: 121 EGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDTFGSDTATMLGWTAGLGTDI-KLTDN 179
Query: 176 LVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205
+ R+EYR + + KV+ N ++ G+GMKF
Sbjct: 180 VFGRVEYRYTDFGSKSFDNIGKVKATDNRVTFGLGMKF 217
>gi|15964926|ref|NP_385279.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|307300997|ref|ZP_07580766.1| porin [Sinorhizobium meliloti BL225C]
gi|15074105|emb|CAC45752.1| Probable outer membrane protein [Sinorhizobium meliloti 1021]
gi|306903952|gb|EFN34538.1| porin [Sinorhizobium meliloti BL225C]
Length = 212
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L + S++AL +F +A AAD V VP Y P +++G Y G
Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114
+ ++ + +N G ++ GYNV+D ++YG E DV YT +
Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYNVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++
Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170
Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
++ AR EYR + Y + +++ LG+G+KF
Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212
>gi|150396008|ref|YP_001326475.1| porin [Sinorhizobium medicae WSM419]
gi|150027523|gb|ABR59640.1| porin [Sinorhizobium medicae WSM419]
Length = 212
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L + S++AL +F +A AAD V +P Y P +++G Y G
Sbjct: 1 MRMLTTTLMASAMALVAFQAAHAADVVDE--------IPAAPAAEYTEPAVRNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114
+ ++ + +N G ++ GYNV+D ++YG E D+ YT +
Sbjct: 53 GTIDWHHGEADATGNNKSVGTGGGLYGGYNVQDGQMVYGGEADINYTGNDSHSSGRRVQQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GS+R R G +V + +L+Y T G + AG +G TAGVG E +++
Sbjct: 113 GLNGSVRARVGVDV-NPVLVYGTAGVALGNAELKTPAGSDDKTLVGWTAGVGAET-FVTD 170
Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
++ AR EYR + Y + + + LG+G+KF
Sbjct: 171 NITARAEYRYTDYGSKDFRTGGTTISSGYDEHAVKLGMGVKF 212
>gi|307317731|ref|ZP_07597169.1| porin [Sinorhizobium meliloti AK83]
gi|306896493|gb|EFN27241.1| porin [Sinorhizobium meliloti AK83]
Length = 212
Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L + S++AL +F +A AAD V VP Y P +++G Y G
Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114
+ ++ + +N G ++ GY+V+D ++YG E DV YT +
Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYDVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++
Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170
Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
++ AR EYR + Y + +++ LG+G+KF
Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212
>gi|13476553|ref|NP_108123.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14027314|dbj|BAB54268.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 218
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
LAV + AL +A AAD V+ P + GPYAGL+ Y
Sbjct: 11 LAVALGLFALGG--TAYAADVVQEE--------PPAPAPVAELPVASWAGPYAGLNVGYG 60
Query: 66 GSFGEEAHH--------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116
S + GS+F GY + +YG E ++ Y DN I+S G
Sbjct: 61 FSGRTKEKDFDVSTDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGINSKAGF 120
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK--AGEITPIAIGGTAGVGVEVGGLSE 174
GSLR R GY V+ +LLY T G +G TAGVG ++ L++
Sbjct: 121 EGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDTVLGVSDRATMLGWTAGVGTDI-KLTD 179
Query: 175 SLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205
++ R+EYR + + KV+ N ++ GVGMKF
Sbjct: 180 NVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 218
>gi|319784400|ref|YP_004143876.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170288|gb|ADV13826.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 220
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
LAV + AL+ +A AAD V P + GPYAGL+ Y
Sbjct: 11 LAVALGLFALSG--TAYAADVVSEE--------PPAPAPIAELPVASWAGPYAGLNVGY- 59
Query: 66 GSFGEEAHHNAG------------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHS 112
G G + G GS+F GY + +YG E ++ Y D ++S
Sbjct: 60 GFSGHTKEKDLGVDNVDVGTKGFVGSVFGGYQWQQENFVYGAEAELGYNGVKGDDSGVNS 119
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G GSLR R GY V+ +LLY T G + K E G +G TAG+G ++
Sbjct: 120 KAGFEGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDVYGSDRATLLGWTAGLGTDI-K 178
Query: 172 LSESLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205
L++++ R+EYR + + KV+ N ++ GVGMKF
Sbjct: 179 LTDNVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 220
>gi|315121798|ref|YP_004062287.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495200|gb|ADR51799.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 231
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 28/232 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVR-----RAHHGGRGVVPTIA-TNRYVPIRHDFN 54
M+K FLAVGVS+L L SF + QAAD V+ + RGVVPT+ NRYV +
Sbjct: 1 MKKFFLAVGVSTLTLVSFSAVQAADAVQRPQRRQHASVSRGVVPTVVSANRYVYSQQGIE 60
Query: 55 GPYAGLSALYNGSF-GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN---- 109
GPYAG+S + +F G++ + + GGS+FAGYNV++ YG E D RY+ + +
Sbjct: 61 GPYAGMSIFHERNFSGKDHNKDIGGSLFAGYNVQEGDFFYGAEADARYSHDIASKEHKAA 120
Query: 110 ------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----KYETGKAGE 153
++ GSLR RGGYE++ +++Y TVG A
Sbjct: 121 RLDQKDDAAVSKMYHAADFSGSLRFRGGYEIAAPVVVYGTVGVAAVHKASKAPADAAASP 180
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
IGGTAG+GVE L ++++ R+EYRA+KYS V N +SLG+G++F
Sbjct: 181 AKAFYIGGTAGLGVE-SVLVDNIIGRVEYRATKYSGVSHLQNVVSLGLGIRF 231
>gi|218663696|ref|ZP_03519626.1| outer membrane protein [Rhizobium etli IE4771]
Length = 203
Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-GS 67
S+ A+A +AQAAD V + +A + V ++ G Y G + YN G
Sbjct: 1 MASAFAIAGVSAAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGGAGTYNMGD 54
Query: 68 FGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIGGSLRIRGG 125
FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G GS+R R G
Sbjct: 55 FGSDRHTYGFGGQVFTGYNWQAGQIVYGVESDLGYSGDDVSSGGVENKYGWNGSVRGRVG 114
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
Y++ + LLY T G + + + + A G T G GVE ++ ++ RLEYR +
Sbjct: 115 YDM-NPFLLYGTAGLALGNIKVSDDTSDESKTAYGYTVGAGVEA-FVTNNITTRLEYRYT 172
Query: 186 KYSKVE-----------GFYNTISLGVGMKF 205
Y + N++ LG+G+KF
Sbjct: 173 DYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 203
>gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4]
gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAG 59
M+ L + + SS L+ A AAD V VP +P ++ G Y G
Sbjct: 1 MRTLVMILLASSAGLSLVTGAHAADAVMS--------VPEAPAAVDMPAPVSNWAGAYVG 52
Query: 60 LSALYNGSFGEEAHHN---AGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLH 114
+ Y + + GG ++ GYN+++ I+YG E D+ Y ++
Sbjct: 53 GAGTYTMGRSHGSKFSARAFGGQVYGGYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGKQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GS+R R GY++ + ++Y T G A +G G + A+G T G GVE ++
Sbjct: 113 GVNGSIRGRVGYDL-NPFMVYGTAGVAAADTKISGAGGSDSKAALGYTVGAGVEA-MVTN 170
Query: 175 SLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
++ R+EYR + Y + ++ +G+GMKF
Sbjct: 171 NITTRVEYRYTDYQNKDYNIGGSKVSRGFDDQSVKVGIGMKF 212
>gi|227821495|ref|YP_002825465.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340494|gb|ACP24712.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
Length = 212
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L A+ S++ L +F +A AAD V +P Y P +++G Y G
Sbjct: 1 MRTLTTALMASAITLVAFQAAHAADAVEE--------IPAAPAAEYTEPAVKNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHN----AGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114
+A ++ + +N GG ++ GYNV+D ++YG E DV Y +
Sbjct: 53 GTANWHYGEADATGNNKSVAFGGGLYGGYNVQDGQMVYGGEADVNYAGNDSTSSGRKVKQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GSLR R G ++ + +L+Y T G + + AG +G TAG G E +++
Sbjct: 113 GVNGSLRGRVGVDM-NPVLVYGTAGLALGNAKLSTPAGSDDKTLVGWTAGAGAET-FVTD 170
Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
++ AR+EYR + Y+ + +++ LG+G+KF
Sbjct: 171 NVTARVEYRYTDYASKDFRAGGSTVSSGYDEHSVRLGMGVKF 212
>gi|159185080|ref|NP_355120.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140353|gb|AAK87905.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ V+SL S +A AAD V P + ++GPY G+
Sbjct: 3 TLIVTSLLALSASTAMAADAVYE--------TPAPPVAQETLPVFTWSGPYLGIQGGAGW 54
Query: 67 SFGEEA------HHNAGGSI---FAGYNVE-DSCIMYGVEGDVRYTVPVLA-DNIHSLHG 115
+ G+ + + G I FAGYN + D+ ++ G+EGDV Y I
Sbjct: 55 ANGDFSAGGPVVSDDFNGGILGAFAGYNYQFDNNMVLGIEGDVDYNWNDNDYSGIKVGTD 114
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GS+R R GY D L+YAT G + + G+ G T G GV+ +++
Sbjct: 115 WQGSVRGRVGYAF-DHALIYATAGWTATRGFIETPVGDDKATFNGYTVGAGVDY-AFTDN 172
Query: 176 LVARLEYRASKYSKVEGF-------YNTISLGVGMKF 205
+ RLEYR + Y + F +T+ +G+G+KF
Sbjct: 173 VFGRLEYRYNDYGDKDIFGINTDFDQHTVKVGLGVKF 209
>gi|116251075|ref|YP_766913.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255723|emb|CAK06804.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|220979415|gb|ACL97989.1| outer membrane protein B2 [Rhizobium leguminosarum bv. viciae]
Length = 205
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 26/213 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V ++L L+ A AAD P + V +D++G Y G Y+
Sbjct: 5 LVACAALTLSVAVPAVAADLTYE--------TPPAPSAGQVSSAYDWSGFYLGAQGGYSW 56
Query: 67 S----FGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
S G + ++G + AGYN + I+YG+E D Y N ++ S R
Sbjct: 57 SQATILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGR 113
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
R GY +L K + AG+ I IG TAG G+E ++++++ R E
Sbjct: 114 ARVGYAWDRTLFFATAGVAAGGGKVDIPAAGKKDGILIGWTAGGGIE-HAVTDNILVRAE 172
Query: 182 YRASKYSKVE---------GFYNTISLGVGMKF 205
YR S + + + + G KF
Sbjct: 173 YRHSDFGNKDFGSTIGEVGATQDKVLFGTSYKF 205
>gi|241203671|ref|YP_002974767.1| hypothetical protein Rleg_0932 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857561|gb|ACS55228.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 205
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 84/213 (39%), Gaps = 26/213 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V + LAL+ A AAD P + V +D++G Y G Y+
Sbjct: 5 LVACAVLALSVAVPAVAADLTYE--------TPPAPSAGEVSSAYDWSGFYLGAQGGYSW 56
Query: 67 S----FGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
S G + ++G + AGYN + I+YG+E D Y N ++ S R
Sbjct: 57 SQAKILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGR 113
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
R GY +L K + AG+ I IG TAG G+E ++++++ R E
Sbjct: 114 ARVGYAWDRTLFFATAGVAAGGGKVDISAAGKKDGILIGWTAGGGIE-HAVTDNILVRGE 172
Query: 182 YRASKYSKVE---------GFYNTISLGVGMKF 205
YR S + + + + G KF
Sbjct: 173 YRHSDFGNKDFGSTIGDVGATQDKVLFGTSYKF 205
>gi|209548422|ref|YP_002280339.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534178|gb|ACI54113.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 204
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 27/213 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ + LAL++ A AAD + ++++G Y G Y+
Sbjct: 5 LIACAVLALSAAVPAVAADLTYET---------PAPAAEQISSAYNWSGFYLGGQGGYSW 55
Query: 67 S----FGEEAHHNAG-GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
S G + + + G + AGYN + I+YG+E D Y D + S R
Sbjct: 56 SQTKILGSDENIDGGTAGLHAGYNFQSGNIVYGIENDFNYNFKKNDD---ANLEWDASGR 112
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
R GY ++ +L K + AG+ I IG TAG G+E +++ ++ R E
Sbjct: 113 ARVGYALNRTLFFATAGVAAGGGKVDIPTAGKKDGILIGWTAGGGIE-HAVTDHILVRGE 171
Query: 182 YRASKYSKVE---------GFYNTISLGVGMKF 205
YR S +S + + + G KF
Sbjct: 172 YRHSDFSNKDFGSAIGDVGAKQDKVLFGTSYKF 204
>gi|146425515|emb|CAM89327.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425525|emb|CAM89318.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425535|emb|CAM89309.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425545|emb|CAM89300.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425565|emb|CAM89282.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425575|emb|CAM89273.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425585|emb|CAM89264.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425595|emb|CAM89255.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425605|emb|CAM89246.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425615|emb|CAM89237.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425625|emb|CAM89228.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425635|emb|CAM89219.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425645|emb|CAM89210.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425655|emb|CAM89201.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425665|emb|CAM89192.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425675|emb|CAM89183.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425685|emb|CAM89174.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425695|emb|CAM89165.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425705|emb|CAM89156.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425715|emb|CAM89147.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425725|emb|CAM89138.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425735|emb|CAM89129.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425745|emb|CAM89120.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425755|emb|CAM89111.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425765|emb|CAM89102.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425775|emb|CAM89093.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425785|emb|CAM89084.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425795|emb|CAM89075.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425805|emb|CAM89066.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425815|emb|CAM89057.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425825|emb|CAM89048.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425835|emb|CAM89039.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425845|emb|CAM89030.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425855|emb|CAM89021.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425865|emb|CAM89012.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425875|emb|CAM89003.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425885|emb|CAM88994.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425895|emb|CAM88985.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425905|emb|CAM88976.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146426370|emb|CAM89822.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426380|emb|CAM89813.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426390|emb|CAM89804.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426400|emb|CAM89795.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426410|emb|CAM89786.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426420|emb|CAM89777.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426430|emb|CAM89768.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426440|emb|CAM89759.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426450|emb|CAM89750.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426460|emb|CAM89741.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426470|emb|CAM89732.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426480|emb|CAM89723.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426490|emb|CAM89714.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426500|emb|CAM89705.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426510|emb|CAM89696.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426520|emb|CAM89687.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426530|emb|CAM89678.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426540|emb|CAM89669.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426550|emb|CAM89660.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426560|emb|CAM89651.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426570|emb|CAM89642.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426580|emb|CAM89633.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426590|emb|CAM89624.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426600|emb|CAM89615.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426610|emb|CAM89606.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426620|emb|CAM89597.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426630|emb|CAM89588.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426640|emb|CAM89579.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426650|emb|CAM89570.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426660|emb|CAM89561.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426670|emb|CAM89552.2| 25 kDa outer membrane protein [Brucella suis ATCC 23445]
gi|146426680|emb|CAM89543.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426690|emb|CAM89534.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426700|emb|CAM89525.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426710|emb|CAM89516.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426720|emb|CAM89507.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426730|emb|CAM89498.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426740|emb|CAM89489.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426750|emb|CAM89480.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426760|emb|CAM89471.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426770|emb|CAM89462.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426780|emb|CAM89453.2| 25 kDa outer membrane protein [Brucella suis 1330]
gi|146426900|emb|CAM89345.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146426910|emb|CAM89336.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146427366|emb|CAM90326.2| 25 kDa outer membrane protein [Brucella sp. 5/95]
gi|146427376|emb|CAM90317.2| 25 kDa outer membrane protein [Brucella sp. 59/94]
gi|146427386|emb|CAM90308.2| 25 kDa outer membrane protein [Brucella sp. UK28/03-13840]
gi|146427396|emb|CAM90299.2| 25 kDa outer membrane protein [Brucella sp. F7/99]
gi|146427406|emb|CAM90290.2| 25 kDa outer membrane protein [Brucella sp. F10/99]
gi|146427416|emb|CAM90281.2| 25 kDa outer membrane protein [Brucella sp. F9/99]
gi|146427426|emb|CAM90272.2| 25 kDa outer membrane protein [Brucella sp. F8/99]
gi|146427436|emb|CAM90263.2| 25 kDa outer membrane protein [Brucella sp. F6/99]
gi|146427446|emb|CAM90254.2| 25 kDa outer membrane protein [Brucella sp. UK5/01]
gi|146427456|emb|CAM90245.2| 25 kDa outer membrane protein [Brucella sp. UK40/99]
gi|146427466|emb|CAM90236.2| 25 kDa outer membrane protein [Brucella sp. UK13/99]
gi|146427476|emb|CAM90227.2| 25 kDa outer membrane protein [Brucella sp. 61/94]
gi|146427486|emb|CAM90218.2| 25 kDa outer membrane protein [Brucella sp. 4/96]
gi|146427496|emb|CAM90209.2| 25 kDa outer membrane protein [Brucella sp. 55/94]
gi|146427506|emb|CAM90200.2| 25 kDa outer membrane protein [Brucella sp. UK24/00 (M192)]
gi|146427516|emb|CAM90191.2| 25 kDa outer membrane protein [Brucella sp. 44/94]
gi|146427526|emb|CAM90182.2| 25 kDa outer membrane protein [Brucella sp. 39/94]
gi|146427536|emb|CAM90173.2| 25 kDa outer membrane protein [Brucella sp. UK31/04]
gi|146427546|emb|CAM90164.2| 25 kDa outer membrane protein [Brucella sp. VLA04/06]
gi|146427556|emb|CAM90155.2| 25 kDa outer membrane protein [Brucella sp. VLA04/105]
gi|146427566|emb|CAM90146.2| 25 kDa outer membrane protein [Brucella sp. VLA04.72]
gi|146427576|emb|CAM90137.2| 25 kDa outer membrane protein [Brucella sp. VLA04.67]
gi|146427586|emb|CAM90128.2| 25 kDa outer membrane protein [Brucella sp. F96/2]
gi|146427596|emb|CAM90119.2| 25 kDa outer membrane protein [Brucella sp. F23/97]
gi|146427606|emb|CAM90110.2| 25 kDa outer membrane protein [Brucella sp. UK15/02]
gi|146427616|emb|CAM90101.2| 25 kDa outer membrane protein [Brucella sp. UK10/01]
gi|146427626|emb|CAM90092.2| 25 kDa outer membrane protein [Brucella sp. UK4/01]
gi|146427636|emb|CAM90083.2| 25 kDa outer membrane protein [Brucella sp. UK10/00]
gi|146427646|emb|CAM90074.2| 25 kDa outer membrane protein [Brucella sp. UK5/97]
gi|146427656|emb|CAM90065.2| 25 kDa outer membrane protein [Brucella sp. UK3/97]
gi|146427666|emb|CAM90056.2| 25 kDa outer membrane protein [Brucella sp. UK1/97]
gi|146427676|emb|CAM90047.2| 25 kDa outer membrane protein [Brucella sp. 2/96]
gi|146427686|emb|CAM90038.2| 25 kDa outer membrane protein [Brucella sp. 14/95]
gi|146427696|emb|CAM90029.2| 25 kDa outer membrane protein [Brucella sp. UK35/99]
gi|146427706|emb|CAM90020.2| 25 kDa outer membrane protein [Brucella sp. UK15/98]
gi|146427716|emb|CAM90011.2| 25 kDa outer membrane protein [Brucella sp. 52/94]
gi|146427726|emb|CAM90002.2| 25 kDa outer membrane protein [Brucella sp. 36/94]
gi|146427846|emb|CAM89894.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427856|emb|CAM89885.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427866|emb|CAM89876.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427876|emb|CAM89867.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427886|emb|CAM89858.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427896|emb|CAM89849.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427906|emb|CAM89840.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427916|emb|CAM89831.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427988|emb|CAM90407.2| 25 kDa outer membrane protein [Brucella sp. F5/02]
gi|146428001|emb|CAM90398.2| 25 kDa outer membrane protein [Brucella sp. F5/99]
gi|146428011|emb|CAM90389.2| 25 kDa outer membrane protein [Brucella sp. VLA05/8]
gi|146428021|emb|CAM90380.2| 25 kDa outer membrane protein [Brucella sp. VLA05/4]
gi|146428031|emb|CAM90371.2| 25 kDa outer membrane protein [Brucella sp. UK3/05]
gi|146428041|emb|CAM90362.2| 25 kDa outer membrane protein [Brucella sp. 14/94]
gi|146428051|emb|CAM90353.2| 25 kDa outer membrane protein [Brucella sp. UK2/2000]
gi|146428061|emb|CAM90344.2| 25 kDa outer membrane protein [Brucella sp. UK1/2000]
gi|146428071|emb|CAM90335.2| 25 kDa outer membrane protein [Brucella sp. UK43/99]
gi|170015689|emb|CAP05282.1| 25 kDa outer membrane protein [Brucella sp. BO1]
Length = 163
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49
Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+A + GSI FAG+N + I+YGVEGD Y+ + D + G
Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161
>gi|325293521|ref|YP_004279385.1| Outer membrane protein [Agrobacterium sp. H13-3]
gi|325061374|gb|ADY65065.1| Outer membrane protein [Agrobacterium sp. H13-3]
Length = 210
Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ V+SL S +A AAD V P + ++GPY G+
Sbjct: 3 TLIVTSLLALSASTAMAADAVYE--------TPAPPVAQETLPVFTWSGPYLGIQGGAGW 54
Query: 67 SFGEE------AHHNAGGSI---FAGYNVE-DSCIMYGVEGDVRYTVPVLA-DNIHSLHG 115
+ G+ A + G I FAGYN + D+ + G+EGDV Y ++
Sbjct: 55 ANGDFSAGGPVASDSFDGGILGAFAGYNYQFDNNFVLGIEGDVDYNWNDNDYAGVNIGTD 114
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSE 174
GS+R R GY D L+Y T G + + AG+ + G T G G++ ++
Sbjct: 115 WQGSVRGRVGYAF-DRALIYGTAGWTATRGFIETPGAGKDSTTFNGYTVGAGLDY-AFTD 172
Query: 175 SLVARLEYRASKYSKVEGF-------YNTISLGVGMKF 205
++ R+EYR + Y + F +T+ +G+G+KF
Sbjct: 173 NVFGRIEYRYNDYGDKDIFGVNTDFDQSTVKVGLGVKF 210
>gi|146427796|emb|CAM89939.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427806|emb|CAM89930.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427816|emb|CAM89921.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427826|emb|CAM89912.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427836|emb|CAM89903.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49
Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+A + GSI FAG+N + I+YGVEGD Y+ + D + G
Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161
>gi|31322670|gb|AAP22071.1| outer membrane protein [Sinorhizobium fredii]
Length = 212
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 27/222 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59
M+ L + S++AL + +A AAD V VP Y P +++G Y G
Sbjct: 1 MRTLTTTLMASAIALVALQAAHAADAVDE--------VPAAPAAEYTDPAVKNWSGAYVG 52
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGY----NVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114
+A ++ + N G NV+D ++YG E DV Y +
Sbjct: 53 GTANWHHGEADATGGNTSAGFGGGLYGGYNVQDGQMVYGGEADVNYAGNDSHSSGRRVKQ 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ GS+R R G ++ + +L+Y T G + + AG +G TAG G E +++
Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGLALGNAKLSTPAGSDDKTLVGWTAGAGAET-FVTD 170
Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
++ AR+EYR + Y+ + +++ LG+G+KF
Sbjct: 171 NVTARVEYRYTDYASKDFRTGGSTVSSGYDEHSVKLGMGVKF 212
>gi|146425555|emb|CAM89291.2| 25 kDa outer membrane protein [Brucella melitensis]
Length = 163
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49
Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+A + GSI FAG+N + I+YGVEGD Y+ + D + G
Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA 161
>gi|146426790|emb|CAM89444.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426800|emb|CAM89435.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426810|emb|CAM89426.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426820|emb|CAM89417.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426830|emb|CAM89408.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426840|emb|CAM89399.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426850|emb|CAM89390.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426860|emb|CAM89381.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426870|emb|CAM89372.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426880|emb|CAM89363.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426890|emb|CAM89354.2| 25 kDa outer membrane protein [Brucella ovis]
Length = 163
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49
Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+A + GSI FAG+N + I+YGVEG+ Y+ + D + G
Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQGF 109
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161
>gi|15888468|ref|NP_354149.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|18139945|gb|AAL60203.1|AF445083_1 outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|15156164|gb|AAK86934.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 218
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 33/228 (14%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAG 59
M+ + S++A A F +A AAD V VP P D++G Y G
Sbjct: 1 MRIFVATLMASTMAAAGFSAAYAADAVNE--------VPQAPVAYDQPAAVKDWSGAYLG 52
Query: 60 LSALYNGSFGEEAHHNAGG-----SIFAGYNVEDSCIMYGVEGDVRY------TVPVLAD 108
+ Y+ ++ ++ GYN++ I+YG E DV V
Sbjct: 53 GTVNYDWGRFSSSNDGRDAKGFGGGVYGGYNMQSGQIVYGAEADVNMGDEKGSAGTVAGR 112
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+ G+ GSLR R GY++ + LLY T G V+ + + A+G T G GVE
Sbjct: 113 AVEGKQGVNGSLRGRVGYDM-NPFLLYGTAGLAVSDNKVRDGVNKDSATALGYTVGAGVE 171
Query: 169 VGGLSESLVARLEYRASKYSKVEGF-----------YNTISLGVGMKF 205
+++++ ARLEYR S Y K + +++ G+G+KF
Sbjct: 172 A-MVTDNITARLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF 218
>gi|146427766|emb|CAM89966.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427776|emb|CAM89957.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427786|emb|CAM89948.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49
Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+A + GSI FAG+N + I+YGVEGD Y+ + D G
Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGPEVKQGF 109
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161
>gi|146427736|emb|CAM89993.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427746|emb|CAM89984.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427756|emb|CAM89975.2| 25 kDa outer membrane protein [Brucella neotomae]
Length = 163
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
V VS+ L +A AAD ++ P + V ++ + G Y GL Y G
Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49
Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+A + GSI FAG+N + I+YGVEGD Y+ + D + G
Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 110 EGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161
>gi|110634323|ref|YP_674531.1| OmpA-like transmembrane region [Mesorhizobium sp. BNC1]
gi|110285307|gb|ABG63366.1| OmpA-like transmembrane region [Chelativorans sp. BNC1]
Length = 216
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY--------NGSFGEE 71
A AAD + V + GPYAG++ Y +G+ GE
Sbjct: 23 PAYAADVIMEQPPAPPAA------PMEVAPVATWAGPYAGIALGYGFSGEVSADGAPGEV 76
Query: 72 AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIGGSLRIRGGYEVSD 130
G++F G+ + +YGVEGD+ Y + HG+ GSLR R GY +D
Sbjct: 77 ETDGFVGNVFGGWQGQSGQFVYGVEGDIGYNGMEGSEGGVDVEHGVDGSLRARLGYAATD 136
Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-- 188
++LLYAT G ++ +G + A+G TAG GV+V L+ ARLEYR + S
Sbjct: 137 NVLLYATGGGAASRLEASGGGLTESETAVGWTAGAGVDV-KLTPKSFARLEYRYTDLSAE 195
Query: 189 ----KVEGFYNTISLGVGMKF 205
V+ N + LGVGM+F
Sbjct: 196 FDSVDVDTTSNKVMLGVGMQF 216
>gi|325292505|ref|YP_004278369.1| outer membrane protein [Agrobacterium sp. H13-3]
gi|325060358|gb|ADY64049.1| outer membrane protein [Agrobacterium sp. H13-3]
Length = 218
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + S++A A F +A AAD V +A ++ P++ ++ G Y G
Sbjct: 1 MRIFVATIMASTIAAAGFSAAHAADAVNDVPQA------PVAYDQPAPVK-NWTGAYLGG 53
Query: 61 SALYNGSFGEEAHHNAGG-----SIFAGYNVEDSCIMYGVEGDVRY------TVPVLADN 109
+A Y+ ++ I+ GYN+++ I+YG E DV V +
Sbjct: 54 TANYDWGRFSSSNDGRDAKGAGGGIYGGYNMQNGQIVYGAEADVNLGRERGSAGTVGGNA 113
Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
+ G+ GSLR R GY++ + LLY T G + + + A+G T G GVE
Sbjct: 114 VEGKQGVNGSLRARVGYDM-NPFLLYGTAGLAASDNKVRDATSKDSATALGYTVGAGVEA 172
Query: 170 GGLSESLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
+++++ ARLEYR S Y K + +++ G+G+KF
Sbjct: 173 -MVTDNITARLEYRYSDYQKKDYSLDSGAFSRGFDDHSVKAGIGVKF 218
>gi|307944219|ref|ZP_07659560.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
gi|307772565|gb|EFO31785.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
Length = 242
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 35/232 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L A +++++A + AAD + A P R D++G YAG
Sbjct: 19 MKRLACAAIAATVSVAGLAPSYAADLPQAAPTYDTTYEPAP------SGRFDWSGAYAGG 72
Query: 61 SALYNGSFGEEAH----------HNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLAD- 108
S + S + + G + GYN I+ GVE D + T
Sbjct: 73 SLGWVWSGFDTTSSPTGSFDHDTNGFSGGVHGGYNFAITPNIVAGVELDFQMTDLYENTV 132
Query: 109 ----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
N+ + S R R GY + D L+Y T G +A A+G TAG
Sbjct: 133 RNGVNVKTSSAWNSSARARLGYAM-DRFLVYGTAGLAIADLSINANGASEDTTALGWTAG 191
Query: 165 VGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205
GVE G +S +L AR+EY + + + +T+ G+ KF
Sbjct: 192 AGVE-GAISNNLTARVEYLYQDFGRESFTLGGSKYRADLDTSTVRFGLSYKF 242
>gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 26/217 (11%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE- 71
LA + AA P + P P ++GPYAG YN S +
Sbjct: 14 LATIALALPLAAMPAHAQDNASETAFPDSRIPESAPPVAIWSGPYAGTFVGYNVSRFDNL 73
Query: 72 -----AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGS 119
+ G +AG+N++D ++YGVEGDV + ++ + GS
Sbjct: 74 RGASISGDGVAGGAYAGFNLQDGSLVYGVEGDVGGAGFDATRRNALGNLDLSGESNVFGS 133
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
LR R G +V D L+Y T G +A+ + + ++G T G GVE +++S+ R
Sbjct: 134 LRGRVGVDV-DPFLVYGTGGLAIAETELSLGGVSDSEASVGYTIGAGVEAQ-VTDSIRTR 191
Query: 180 LEYRASKYSKVEG-----------FYNTISLGVGMKF 205
LEYR S + + +++ GV + F
Sbjct: 192 LEYRYSDFGSSDYDLGRTSVSSGFDEHSVRAGVSLNF 228
>gi|163759157|ref|ZP_02166243.1| outer membrane protein [Hoeflea phototrophica DFL-43]
gi|162283561|gb|EDQ33846.1| outer membrane protein [Hoeflea phototrophica DFL-43]
Length = 212
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ LA+ ++L++ AAD + P +P + G Y G
Sbjct: 1 MRIRKLALLAAALSVPLATPVLAADAILEQP-------PVPPVAETLPQSFIWTGGYVGG 53
Query: 61 SALYNGSFGEE----AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHG 115
Y + GG ++ GYN + I+YGVEGD+ Y+ + + G
Sbjct: 54 YGEYKWGEFDALAGDDADGFGGGVYGGYNWQSDNIVYGVEGDLGYSGADASLGGVTGEQG 113
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
GSLR R GY++ + LLYAT G + T AG T +G TAG G E ++E+
Sbjct: 114 FNGSLRARLGYDI-NPFLLYATGGLAATRAEVTSAAGSDTNTHLGWTAGAGAEA-FVTEN 171
Query: 176 LVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
+ RLEYR + Y +++ LG+GMKF
Sbjct: 172 ITTRLEYRYTDYGSETYNLGGTNVSSGFDDHSVRLGIGMKF 212
>gi|332717162|ref|YP_004444628.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
gi|325063847|gb|ADY67537.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
Length = 223
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 89/226 (39%), Gaps = 32/226 (14%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+ L ++ L ++ AAD V G +P V ++G Y G S
Sbjct: 8 RMLKQSLLALGLLGILSDASVAADAV--------GDIPAAPVVNDVAPAFSWDGVYVGAS 59
Query: 62 ALYNGS------FGEEAHHNAGGS---IFAGYNVE-DSCIMYGVEGDVRYTV-PVLADNI 110
A Y + FG H G FAGYN E I+ GVEGD+ Y
Sbjct: 60 AGYGWNRVKSTTFGVTTKHEFDGGRFSGFAGYNAEVAPSIILGVEGDLGYAWGDKTIVTS 119
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G+ GS R+R GY + D L+Y G GE + + G T G GV+
Sbjct: 120 EVSAGLNGSARLRAGYAI-DRALIYTAAGYTATDSEVKAPFGEDSKVLHGWTVGAGVDY- 177
Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
+ +L R+EYR + + K + + + +G+G+KF
Sbjct: 178 AFTNNLFGRVEYRYNDFGKATYHTGPITSTGDVSEHVVKVGLGVKF 223
>gi|190891678|ref|YP_001978220.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|218510868|ref|ZP_03508746.1| outer membrane protein [Rhizobium etli Brasil 5]
gi|190696957|gb|ACE91042.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 207
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 83/217 (38%), Gaps = 30/217 (13%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++ +A AAD V+ VPT ++GPY G+
Sbjct: 3 LTIATAFLALVATTAFAADVVQD--------VPTAPVA--AAPVFTWSGPYFGIDGGAGW 52
Query: 67 ------SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGI 116
+ G A + G +F AGYN + I+ G+EG++ +
Sbjct: 53 LNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNWNEEDALGADVGTDW 112
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSES 175
G++R R GY D L+Y G + Y + T G T G GV+ ++ +
Sbjct: 113 AGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNN 170
Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
+ AR EYR + Y V+ + + G+G+KF
Sbjct: 171 IFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207
>gi|150396648|ref|YP_001327115.1| porin [Sinorhizobium medicae WSM419]
gi|150028163|gb|ABR60280.1| porin [Sinorhizobium medicae WSM419]
Length = 215
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M + L ++ L A AAD V T+ + + G L
Sbjct: 1 MIRNVLVAIFAAFMLGG--KAHAADL--AQPPEPTPTVETVHSFVWTGGYLGLQGGGGWL 56
Query: 61 SALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV-----PVLADNIHSL 113
++ + G + +GG FAGYN + + GVEGDV Y V N
Sbjct: 57 NSDLSVPGGGGSKRFSGGLLGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGTNTDVG 116
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGL 172
+ GS+R R GY V+D LLYAT G V + + + A + G T G GV+ G
Sbjct: 117 TDVSGSVRARLGYTVNDRTLLYATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GF 175
Query: 173 SESLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
++S+ R EYR + +S V+ + ++GVG+KF
Sbjct: 176 TDSVFGRAEYRYNDFSDKDVGGVDVDLDQHQFTIGVGVKF 215
>gi|218513075|ref|ZP_03509915.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 134
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 82 AGYNVEDSCIMYGVEGDVRYTVP-VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
GYN + I+YGVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G
Sbjct: 1 TGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGL 59
Query: 141 DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------- 191
+ + + + A G T G GVE ++ ++ RLEYR + Y +
Sbjct: 60 ALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFS 118
Query: 192 --GFYNTISLGVGMKF 205
N++ LG+G+KF
Sbjct: 119 RGYDENSVKLGIGVKF 134
>gi|218461202|ref|ZP_03501293.1| outer membrane protein [Rhizobium etli Kim 5]
gi|218658675|ref|ZP_03514605.1| outer membrane protein [Rhizobium etli IE4771]
Length = 207
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 80/217 (36%), Gaps = 30/217 (13%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++ +A AAD V+ A ++GPY G+
Sbjct: 3 LTIATTFLALVATTAFAADVVQEAPTAPLAAA----------PVFTWSGPYFGIDGGAAW 52
Query: 67 ------SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGI 116
+ G A + G +F AGYN + + G+EG++ +
Sbjct: 53 LNGDFSAGGASASEDFNGGVFGGFAGYNFQFDNFVVGIEGNLEHNWNEEDALGAEVGTDW 112
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSES 175
G++R R GY D L+Y G + Y + T G T G GV+ ++ +
Sbjct: 113 AGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNN 170
Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
+ AR EYR + Y V+ + + G+G+KF
Sbjct: 171 IFARGEYRYNDYGEQDILGVDVDLDQHELKFGIGVKF 207
>gi|86358535|ref|YP_470427.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86282637|gb|ABC91700.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 208
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 31/218 (14%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++ SA AAD V+ ++GPY G+ +
Sbjct: 3 LTIATTFLALVATSAFAADAVQDVPAAPVAAA----------PAFTWSGPYLGIDGGASW 52
Query: 67 SFGE-------EAHHNAGG--SIFAGYNVE-DSCIMYGVEGDVRYTVPVLAD-NIHSLHG 115
G+ ++ GG FAGYN + D+ I+ G+EG++ Y
Sbjct: 53 LNGDFSAGGASDSQDFNGGVFGAFAGYNFQFDNNIVVGIEGNLEYNWNEEEALGADVGTD 112
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSE 174
G++R R GY D LLY G + Y + + T G T G GV+ ++
Sbjct: 113 WAGAVRGRVGYAF-DRALLYGAAGWTATRGYVDLPGSDKETETFNGYTVGAGVDF-AITN 170
Query: 175 SLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
++ AR EYR + + V+ + + G+G+KF
Sbjct: 171 NIFARGEYRYNDFGEKDILGVDVDLNQHELKFGIGVKF 208
>gi|218461155|ref|ZP_03501246.1| outer membrane protein [Rhizobium etli Kim 5]
Length = 168
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S+ A+A +AQAAD V + +A + V ++ G Y G
Sbjct: 1 MRVLIAGLMASAFAIAGVSAAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESDLGYSGDDVSSGGVENKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
GS+R R GY++ + LLY T G + + + + A G T G
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKTAYGYTVG 160
>gi|327189607|gb|EGE56759.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 207
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 30/217 (13%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++ +A AAD V+ A ++GPY G+
Sbjct: 3 LTIATAFLALVATTAFAADVVQEAPTAPVAAA----------PVFTWSGPYFGIDGGAGW 52
Query: 67 ------SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGI 116
+ G A + G +F AGYN + I+ G+EG++ +
Sbjct: 53 LNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNWNEEDALGADVGTDW 112
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSES 175
G++R R GY D L+Y G + Y + T G T G GV+ ++ +
Sbjct: 113 AGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNN 170
Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
+ AR EYR + Y V+ + + G+G+KF
Sbjct: 171 IFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207
>gi|307320995|ref|ZP_07600402.1| porin [Sinorhizobium meliloti AK83]
gi|306893369|gb|EFN24148.1| porin [Sinorhizobium meliloti AK83]
Length = 213
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 68 FGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRI 122
G + +GG FAGYN + + GVEGDV Y V + + + GS+R
Sbjct: 64 GGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVFGSDTEAGTDVSGSVRA 123
Query: 123 RGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
R GY V+D L+YAT G V + + + A + G T G GV+ G ++S+ R E
Sbjct: 124 RLGYTVNDRTLIYATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAE 182
Query: 182 YRASKYS-------KVEGFYNTISLGVGMKF 205
YR + + V+ + ++GVG+KF
Sbjct: 183 YRYNDFGDKDVGGVNVDLDQHQFTVGVGVKF 213
>gi|227821981|ref|YP_002825952.1| outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340981|gb|ACP25199.1| outer membrane protein [Sinorhizobium fredii NGR234]
Length = 216
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 25/219 (11%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-- 66
+ ++ +A F ++ AA P A + G Y GL
Sbjct: 1 MIRNVLVAMFGASLAAGPTYAADITEAPE--PAPAILETTPTFVWTGGYVGLQGGGGWLN 58
Query: 67 ----SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTV-----PVLADNIHSLH 114
G A + G +F AGYN + + GVEGDV Y V +
Sbjct: 59 SDLSVPGASASEDFSGGLFGAFAGYNYQMGDWVVGVEGDVSYNWNDKSFTVFGASTEVGT 118
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLS 173
+ GS+R R GY +++ LLY T G V + + + A + G T G G++ +
Sbjct: 119 DVSGSVRGRVGYTLNEKALLYGTGGWAVTRGFVDVAGAPKEKETFNGWTIGGGIDY-AFT 177
Query: 174 ESLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
S+ R EYR + + V+ + ++GVG+KF
Sbjct: 178 NSMFGRAEYRYNDFGDKDVGGVDVDLDQHQFTVGVGVKF 216
>gi|239830970|ref|ZP_04679299.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
gi|239823237|gb|EEQ94805.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
Length = 240
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 88/240 (36%), Gaps = 49/240 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
KL + S++AL + A+AAD V V + G Y G
Sbjct: 13 KLKALLLASTVALVAATGAKAADAVIEQE----------PAPVVVAPSFTWTGAYIGGQI 62
Query: 63 LYNG----------SFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI- 110
Y S+G+ G ++AGYN + I+ G++GDV Y ++
Sbjct: 63 GYGWGKSNFDGDVFSYGDVKPDGFLGGVYAGYNFDLGNNIVLGIDGDVTYNDVSKDIDVF 122
Query: 111 ---------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITP 156
+ G++R R GY V D + Y G +G +
Sbjct: 123 DGDLAVGDFETKLRWSGAVRARVGYAV-DRFMPYLAGGVAFGNIKNSGSIDGIGSFSESK 181
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205
G TAG GV+ +++L+ RLEYR + Y + + N + LGV KF
Sbjct: 182 TLTGWTAGAGVDYAA-TDNLIVRLEYRYTDYGDKDIDFGGLNINQDFKTNEVRLGVAYKF 240
>gi|15965438|ref|NP_385791.1| outer-membrane protein [Sinorhizobium meliloti 1021]
gi|307310613|ref|ZP_07590260.1| porin [Sinorhizobium meliloti BL225C]
gi|15074619|emb|CAC46264.1| Probable outer-membrane protein [Sinorhizobium meliloti 1021]
gi|306899723|gb|EFN30349.1| porin [Sinorhizobium meliloti BL225C]
Length = 215
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 68 FGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV-----PVLADNIHSLHGIGGSL 120
G + +GG FAGYN + + GVEGDV Y V + + + GS+
Sbjct: 64 GGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGSDTEAGTDVSGSV 123
Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
R R GY V+D L+YAT G V + + + A + G T G GV+ G ++S+ R
Sbjct: 124 RARLGYTVNDRTLIYATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGR 182
Query: 180 LEYRASKYS-------KVEGFYNTISLGVGMKF 205
EYR + + V+ + ++GVG+KF
Sbjct: 183 AEYRYNDFGDKDVGGVNVDLDQHQFTVGVGVKF 215
>gi|222087507|ref|YP_002546044.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221724955|gb|ACM28111.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 204
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63
+ + +L + SA AAD ++GPY G+
Sbjct: 1 MLIPALLALASTSAVAADLTEE-----------PVAAAAPASVFTWSGPYLGVHGGGAIT 49
Query: 64 ---YNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTVPVLA--DNIHSLHGI 116
+ G+++ GG + F GYN + ++ GV+G++ Y A +
Sbjct: 50 KGNFKFGSGDQSEDFKGGFLGNFFGYNYQFDKVVVGVDGNIDYNWNNKAVANASSVGTDW 109
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSES 175
G++R R GY D+LL+Y G A+ + + +G+ + G TAG GV+ + +
Sbjct: 110 SGAVRGRVGYAF-DNLLIYGAAGWTAARGFADVSGSGDGKVVFSGWTAGTGVDY-AFTNN 167
Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205
+ AR EYR S + K + +I+LGVG+KF
Sbjct: 168 IFARAEYRYSDFGSKELQGVKSDLTEQSINLGVGLKF 204
>gi|241518381|ref|YP_002979009.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862794|gb|ACS60458.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 207
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 30/206 (14%)
Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG------SFGEE 71
+A AAD V ++GPY G+ + G
Sbjct: 14 STTALAADAVPVI----------SDAPVAAAPAFTWSGPYLGIDGGAGWLNGDFSAGGAS 63
Query: 72 AHHNAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIRGGYE 127
A + G IF G YN + I+ G+EG++ + G++R R GY
Sbjct: 64 ASEDFNGGIFGGFVGYNFQFDNIVVGIEGNLEHNWNEEEALGADVGTDWTGAVRGRVGYA 123
Query: 128 VSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
D L+Y G + Y + T G T G G++ ++ ++ AR EYR +
Sbjct: 124 F-DKALIYGAAGWTATRGYVDLPGLDKETETFNGYTVGAGLDF-AITNNIFARGEYRYND 181
Query: 187 YS-------KVEGFYNTISLGVGMKF 205
+ V+ + + G+G+KF
Sbjct: 182 FGEKDVLGVDVDLDQHELKFGIGVKF 207
>gi|218508536|ref|ZP_03506414.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 144
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S+ A+A AQAAD V + +A + V ++ G Y G
Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117
+ YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G
Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
GS+R R GY++ + LLY T G + +
Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVS 144
>gi|153007478|ref|YP_001368693.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151559366|gb|ABS12864.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 88/240 (36%), Gaps = 49/240 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
KL + S++AL + A+AAD V V ++G Y G
Sbjct: 2 KLKALLLASTVALVAATGAKAADAVIEQE----------PVPVVVAPTFTWSGAYIGGQI 51
Query: 63 LYNG----------SFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIH 111
Y SFG G I+AGYN + I+ G++GDV Y +++
Sbjct: 52 GYGWGKSDFSGDVYSFGNVKPDGFLGGIYAGYNFDLGNSIVLGIDGDVTYNDVSKDIDVY 111
Query: 112 S----------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITP 156
S G++R R GY V D + Y G +G +
Sbjct: 112 SGDLAVGDFETKLRWSGAVRARVGYAV-DRFMPYLAGGVAFGNIKNSGSIDGIGSFSESK 170
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
G TAG GV+ +++L+ RLEYR + Y + N + LGV KF
Sbjct: 171 TLTGWTAGAGVDYAA-TDNLIVRLEYRYTDYGDKDIEFGGLNVNQDFKTNEVRLGVAYKF 229
>gi|222149200|ref|YP_002550157.1| outer membrane protein [Agrobacterium vitis S4]
gi|221736185|gb|ACM37148.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 76/203 (37%), Gaps = 28/203 (13%)
Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGP---------YAGLSALYNGSFGEE 71
A AAD V + VPT P + G + + G+ +
Sbjct: 20 AMAADAVDQ--------VPTAPAAVETPAAFSWAGGYIGVYGGYGWLDATLSQGGASLSD 71
Query: 72 AHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVS 129
F G+N + ++ GVE DV Y + + GS R R GY +
Sbjct: 72 NFDGGRIGGFGGWNFDVGHNVILGVEADVNYDWNENNYSGVKVGMDVSGSARARAGYAI- 130
Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
D L++ G + Y +G+ G T G GV+ ++ + RLEYR + Y
Sbjct: 131 DRALIFVAGGWTADRTYIKSSSGDFNKTLNGWTIGAGVDY-AITNRIFTRLEYRYNDYGT 189
Query: 190 V-------EGFYNTISLGVGMKF 205
+ N ++LG+G+KF
Sbjct: 190 KNISGIDFDSKQNVVNLGIGIKF 212
>gi|222102056|ref|YP_002546646.1| hypothetical protein Arad_12130 [Agrobacterium radiobacter K84]
gi|221728173|gb|ACM31182.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 205
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 18/180 (10%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNG----SFGEEAHHNAG-GSIFAGYNVEDSCIMYG 94
+ ++++G Y G Y+ G + N G GYN + I+YG
Sbjct: 30 APQPEQQAYSAYNWSGFYLGAQGGYSWNKAKYLGADQSLNTGSAGAHVGYNFQTGNIIYG 89
Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154
+E D Y + S R R GY + +LL K + G+
Sbjct: 90 IENDFNYNFDK---GNKADLQWDASGRARVGYALDRTLLFATAGLAAAGGKVDAPAIGKK 146
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------GFYNTISLGVGMKF 205
I IG TAG GVE L+++++ R EYR S + K + I LG KF
Sbjct: 147 DDILIGWTAGAGVE-RALTDNILIRGEYRYSDFGKKDFGSDIGDFSATQQKIILGASYKF 205
>gi|306844393|ref|ZP_07476983.1| outer membrane protein [Brucella sp. BO1]
gi|306275206|gb|EFM56956.1| outer membrane protein [Brucella sp. BO1]
Length = 227
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 84/238 (35%), Gaps = 47/238 (19%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
KL + S++ L + A AAD V V +NG Y G
Sbjct: 2 KLKALLFASTVVLVATTGANAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 51
Query: 63 LYNGSFGEEAHHNAG----------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA---- 107
Y ++ + G G ++AGYN + ++ G++GDV Y
Sbjct: 52 GYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFL 111
Query: 108 -----DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPIA 158
+ + G++R R GY V D L Y G + + +
Sbjct: 112 DGNDAGSFENRLRWSGAVRARAGYAV-DRFLPYIAGGVAFGSLRNRGEFEDASFSQSKTL 170
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205
G T G G++ +++++ RLEYR + Y + + N I GV KF
Sbjct: 171 TGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDDAAVTNNFKTNDIRFGVAYKF 227
>gi|307315839|ref|ZP_07595348.1| porin [Sinorhizobium meliloti BL225C]
gi|306898513|gb|EFN29191.1| porin [Sinorhizobium meliloti BL225C]
Length = 208
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 80/213 (37%), Gaps = 31/213 (14%)
Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71
S L A AAD + P ++G Y G+ + GE
Sbjct: 8 SFILFGSSGAMAADVTFDNS--------ALPPVSEAP--FSWSGAYIGVQGGGGWASGEF 57
Query: 72 AHHNAGG---------SIFAGYNVE-DSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSL 120
+ G F GYN + D+ ++ G+EGDV + GS+
Sbjct: 58 SGFGINGSEDANGGSLGGFVGYNYQFDNNLVLGIEGDVEHDWNEQQVFGADFGTDWAGSV 117
Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
R R GY D+ L+YAT G + Y G+ G T G G++ + + R
Sbjct: 118 RGRLGYAF-DNALIYATAGWAATRGYVEVPGLGKDEKTFNGYTVGAGLDY-AFTNQVFGR 175
Query: 180 LEYRASKYS-------KVEGFYNTISLGVGMKF 205
+EYR + Y V+ + + +G+G+KF
Sbjct: 176 VEYRYNDYGDQDLQGINVDVDQHAVKVGLGIKF 208
>gi|153011627|ref|YP_001372841.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151563515|gb|ABS17012.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 228
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 84/239 (35%), Gaps = 48/239 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
K+ + S++AL + A+AAD + P + G Y G
Sbjct: 2 KIKSLLLASTVALIATTGAKAADAIVEEPAPVIVAEP----------IFSWTGAYIGGQI 51
Query: 63 LYNGSFGEEAH------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-------- 107
Y E G ++AGYN + + GV+GD+ Y
Sbjct: 52 GYGWGKSEFEDAFRVKPDGFLGGLYAGYNFDVGNNFILGVDGDITYNNLKDNYSATDGDI 111
Query: 108 -DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE--------ITPIA 158
++ S G++R R G D + Y G T A + +
Sbjct: 112 AGDLESKLRWSGAVRARAGVAF-DRFMPYIAGGVAFGSVKNTLSATDGVDEISVSQSKTY 170
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205
G TAG GV+ +++L+ RLEYR + Y K + + + + LGV KF
Sbjct: 171 TGWTAGAGVDYAA-TDNLILRLEYRYTDYGKKDFDFGTDVSVEDKFKTHDVRLGVAYKF 228
>gi|256060263|ref|ZP_05450438.1| outer membrane protein [Brucella neotomae 5K33]
gi|261324236|ref|ZP_05963433.1| Omp25c [Brucella neotomae 5K33]
gi|46251235|gb|AAS84588.1| Omp25c [Brucella neotomae]
gi|261300216|gb|EEY03713.1| Omp25c [Brucella neotomae 5K33]
Length = 228
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 83/239 (34%), Gaps = 48/239 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
KL + S++ L + AAD V V +NG Y G
Sbjct: 2 KLKALLFASTVVLVAATGTNAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 51
Query: 63 LYNGSFGEEAHHNAG----------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADN-- 109
Y ++ + G G ++AGYN + ++ G++GDV Y +
Sbjct: 52 GYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFL 111
Query: 110 --------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPI 157
+ G++R R GY V D L Y G + G +
Sbjct: 112 DENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGVAFGSLRNRGEFEGTGFSQSKT 170
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205
G T G G++ +++++ RLEYR + Y + + N I GV KF
Sbjct: 171 LTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDDAAVTNNFKTNDIRFGVAYKF 228
>gi|256060262|ref|ZP_05450437.1| outer membrane protein, putative [Brucella neotomae 5K33]
gi|261324235|ref|ZP_05963432.1| Omp25d [Brucella neotomae 5K33]
gi|46251251|gb|AAS84596.1| Omp25d [Brucella neotomae]
gi|261300215|gb|EEY03712.1| Omp25d [Brucella neotomae 5K33]
Length = 230
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 83/241 (34%), Gaps = 50/241 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51
Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110
Y NGS E + G ++ GYN + + G++ +V Y + +
Sbjct: 52 GYGWGRAKLENRTNGSTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111
Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155
+ G++R R GY + D + Y G + G+ +
Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204
G T G G++ +++++ RLEYR + Y K N I LGV K
Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229
Query: 205 F 205
F
Sbjct: 230 F 230
>gi|225851658|ref|YP_002731891.1| porin [Brucella melitensis ATCC 23457]
gi|256264831|ref|ZP_05467363.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|225640023|gb|ACN99936.1| porin [Brucella melitensis ATCC 23457]
gi|263095287|gb|EEZ18914.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|326408138|gb|ADZ65203.1| porin [Brucella melitensis M28]
gi|326537849|gb|ADZ86064.1| porin [Brucella melitensis M5-90]
Length = 230
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51
Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI 110
Y NG E + G ++ GYN + + G++ +V Y + +
Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNHFILGLDANVDYNNLKKSRDF 111
Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155
+ G++R R GY + D + Y G + G+ +
Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204
G T G G++ +++++ RLEYR + Y K N I LGV K
Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229
Query: 205 F 205
F
Sbjct: 230 F 230
>gi|17988113|ref|NP_540747.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501032|ref|NP_697159.1| outer membrane protein [Brucella suis 1330]
gi|62289099|ref|YP_220892.1| hypothetical protein BruAb1_0115 [Brucella abortus bv. 1 str.
9-941]
gi|82699037|ref|YP_413611.1| outer membrane protein [Brucella melitensis biovar Abortus 2308]
gi|148559864|ref|YP_001258156.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161618106|ref|YP_001591993.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163842393|ref|YP_001626797.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189023374|ref|YP_001934142.1| outer membrane protein [Brucella abortus S19]
gi|225626661|ref|ZP_03784700.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237814591|ref|ZP_04593589.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|254690428|ref|ZP_05153682.1| outer membrane protein, putative [Brucella abortus bv. 6 str. 870]
gi|254694916|ref|ZP_05156744.1| outer membrane protein, putative [Brucella abortus bv. 3 str.
Tulya]
gi|254707184|ref|ZP_05169012.1| outer membrane protein, putative [Brucella pinnipedialis
M163/99/10]
gi|254709271|ref|ZP_05171082.1| outer membrane protein, putative [Brucella pinnipedialis B2/94]
gi|254713306|ref|ZP_05175117.1| outer membrane protein, putative [Brucella ceti M644/93/1]
gi|254716340|ref|ZP_05178151.1| outer membrane protein, putative [Brucella ceti M13/05/1]
gi|254731459|ref|ZP_05190037.1| outer membrane protein, putative [Brucella abortus bv. 4 str. 292]
gi|256030794|ref|ZP_05444408.1| outer membrane protein, putative [Brucella pinnipedialis M292/94/1]
gi|256045910|ref|ZP_05448784.1| outer membrane protein, putative [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112624|ref|ZP_05453545.1| outer membrane protein, putative [Brucella melitensis bv. 3 str.
Ether]
gi|256158815|ref|ZP_05456676.1| outer membrane protein, putative [Brucella ceti M490/95/1]
gi|256254200|ref|ZP_05459736.1| outer membrane protein, putative [Brucella ceti B1/94]
gi|256258680|ref|ZP_05464216.1| outer membrane protein, putative [Brucella abortus bv. 9 str. C68]
gi|256368582|ref|YP_003106088.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260169698|ref|ZP_05756509.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella sp.
F5/99]
gi|260546396|ref|ZP_05822136.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563195|ref|ZP_05833681.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567238|ref|ZP_05837708.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260755975|ref|ZP_05868323.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260759199|ref|ZP_05871547.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260884996|ref|ZP_05896610.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|261215250|ref|ZP_05929531.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|261218121|ref|ZP_05932402.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221348|ref|ZP_05935629.1| Omp25d [Brucella ceti B1/94]
gi|261314665|ref|ZP_05953862.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316777|ref|ZP_05955974.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321032|ref|ZP_05960229.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261759234|ref|ZP_06002943.1| outer membrane protein [Brucella sp. F5/99]
gi|265987848|ref|ZP_06100405.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|265992322|ref|ZP_06104879.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|265994064|ref|ZP_06106621.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|265997308|ref|ZP_06109865.1| Omp25d [Brucella ceti M490/95/1]
gi|297247515|ref|ZP_06931233.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|17983867|gb|AAL53011.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23346896|gb|AAN29074.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251245|gb|AAS84593.1| Omp25d [Brucella abortus]
gi|46251247|gb|AAS84594.1| Omp25d [Brucella ovis]
gi|46251249|gb|AAS84595.1| Omp25d [Brucella canis]
gi|46251253|gb|AAS84597.1| Omp25d [Brucella ceti]
gi|46251255|gb|AAS84598.1| Omp25d [Brucella ceti]
gi|46251257|gb|AAS84599.1| Omp25d [Brucella ceti]
gi|46251259|gb|AAS84600.1| Omp25d [Brucella pinnipedialis]
gi|62195231|gb|AAX73531.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615138|emb|CAJ10071.1| outer membrane protein, putative [Brucella melitensis biovar
Abortus 2308]
gi|148371121|gb|ABQ61100.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161334917|gb|ABX61222.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163673116|gb|ABY37227.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189018946|gb|ACD71668.1| outer membrane protein, putative [Brucella abortus S19]
gi|225618318|gb|EEH15361.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789428|gb|EEP63638.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|255998740|gb|ACU47139.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260096503|gb|EEW80379.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153211|gb|EEW88303.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156756|gb|EEW91836.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260669517|gb|EEX56457.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260676083|gb|EEX62904.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260874524|gb|EEX81593.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|260916857|gb|EEX83718.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260919932|gb|EEX86585.1| Omp25d [Brucella ceti B1/94]
gi|260923210|gb|EEX89778.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293722|gb|EEX97218.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296000|gb|EEX99496.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303691|gb|EEY07188.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739218|gb|EEY27214.1| outer membrane protein [Brucella sp. F5/99]
gi|262551776|gb|EEZ07766.1| Omp25d [Brucella ceti M490/95/1]
gi|262765045|gb|EEZ10966.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|263003388|gb|EEZ15681.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|264660045|gb|EEZ30306.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|297174684|gb|EFH34031.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
Length = 230
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51
Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110
Y NG E + G ++ GYN + + G++ +V Y + +
Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111
Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155
+ G++R R GY + D + Y G + G+ +
Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204
G T G G++ +++++ RLEYR + Y K N I LGV K
Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229
Query: 205 F 205
F
Sbjct: 230 F 230
>gi|254700931|ref|ZP_05162759.1| outer membrane protein, putative [Brucella suis bv. 5 str. 513]
gi|261751446|ref|ZP_05995155.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261741199|gb|EEY29125.1| outer membrane protein [Brucella suis bv. 5 str. 513]
Length = 232
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 82/243 (33%), Gaps = 52/243 (21%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51
Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110
Y NG E + G ++ GYN + + G++ +V Y + +
Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111
Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------E 153
+ G++R R GY + D + Y G + + G
Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGIAFGGIKNSLRIGGEESSKS 170
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVG 202
+ G T G G++ +++++ RLEYR + Y K N I LGV
Sbjct: 171 KSKTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVA 229
Query: 203 MKF 205
KF
Sbjct: 230 YKF 232
>gi|90419513|ref|ZP_01227423.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
gi|90336450|gb|EAS50191.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
Length = 223
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 31/205 (15%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH------HNAGG 78
D + P A + ++G YAG YN S +++ G
Sbjct: 26 DVIYEEPQ-----PPVAAPIAPSTPVYVWSGAYAGAFVGYNTSNFDQSTGASFDGDGFVG 80
Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131
++ GYN + ++G+E D+ + + + I GS R R G V D
Sbjct: 81 GVYTGYNWQADQFVFGLEADLGGSDVDASGTNAATGAQLDADSNIFGSFRARVGVAV-DP 139
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L++AT G A+ + + +IG T G GVE +S+ + RLEYR S +
Sbjct: 140 FLVFATGGLAAARNELSLNGFSDSQTSIGYTLGAGVEAR-VSDDVTTRLEYRYSDFGSET 198
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ +KF
Sbjct: 199 YDLGNTSVSSGFDEHSIRAGIALKF 223
>gi|306844392|ref|ZP_07476982.1| outer membrane protein [Brucella sp. BO1]
gi|306275205|gb|EFM56955.1| outer membrane protein [Brucella sp. BO1]
Length = 230
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPGFSWAGAYFGGQV 51
Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110
Y NG E + G ++ GYN + + G++ +V Y + +
Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111
Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155
+ G++R R GY + D + Y G + G+ +
Sbjct: 112 ITNGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204
G T G G++ +++++ RLEYR + Y K N I LGV K
Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229
Query: 205 F 205
F
Sbjct: 230 F 230
>gi|254718339|ref|ZP_05180150.1| outer membrane protein, putative [Brucella sp. 83/13]
gi|265983298|ref|ZP_06096033.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839561|ref|ZP_07472367.1| outer membrane protein [Brucella sp. NF 2653]
gi|306842593|ref|ZP_07475242.1| outer membrane protein [Brucella sp. BO2]
gi|264661890|gb|EEZ32151.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306287238|gb|EFM58726.1| outer membrane protein [Brucella sp. BO2]
gi|306405347|gb|EFM61620.1| outer membrane protein [Brucella sp. NF 2653]
Length = 230
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPGFSWAGAYFGGQV 51
Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110
Y NG E + G ++ GYN + + G++ +V Y + +
Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111
Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155
+ G++R R GY + D + Y G + G+ +
Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204
G T G G++ +++++ RLEYR + Y K N I LGV K
Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229
Query: 205 F 205
F
Sbjct: 230 F 230
>gi|315498453|ref|YP_004087257.1| porin [Asticcacaulis excentricus CB 48]
gi|315416465|gb|ADU13106.1| porin [Asticcacaulis excentricus CB 48]
Length = 199
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 52 DFNGPYAGLSALYN----------GSFGEEAHHNAG---GSIFAGYNVEDSCIMYGVEGD 98
DF+GPY Y G+ E A + G + G+N + + ++GVE D
Sbjct: 23 DFSGPYIAGQGGYAKTKLEVTYSAGTTTESASDDTGNGAAGVILGFNAQSNGAVFGVETD 82
Query: 99 VRYT-----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153
+ + VL + + + G++R R G+ VS + L Y G + Y +
Sbjct: 83 LNWNNAKDRYRVLGEEVETGIDYSGAVRARLGF-VSGNTLFYGAAGVAGTRAYVEYDGEK 141
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-------FYNTISLGVGMKF 205
T G TAG+G + S+ + R+EYR + + VE ++ LG+GMKF
Sbjct: 142 ETETVAGWTAGIGAD-HAFSDRVFGRIEYRYTDFGDVEDDGVKAELMQQSVWLGLGMKF 199
>gi|237814592|ref|ZP_04593590.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|237789429|gb|EEP63639.1| Porin subfamily protein [Brucella abortus str. 2308 A]
Length = 239
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V +NG Y G Y ++ + G G ++AGYN +
Sbjct: 42 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 101
Query: 91 IMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y + + G++R R GY V D L Y G
Sbjct: 102 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 160
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 161 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 219
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 220 AAVTNNFKTNDIRFGVAYKF 239
>gi|294851523|ref|ZP_06792196.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|294820112|gb|EFG37111.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 237
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V +NG Y G Y ++ + G G ++AGYN +
Sbjct: 40 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 99
Query: 91 IMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y + + G++R R GY V D L Y G
Sbjct: 100 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENHLRWSGAVRARAGYAV-DRFLPYIAGGV 158
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 159 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 217
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 218 AAVTNNFKTNDIRFGVAYKF 237
>gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 221
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 30/228 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M ++ ++ +A ++ AAD + + +D++G Y G
Sbjct: 1 MLRIASCTAIAFGLMAG--TSLAADLPQPVQPSQPEISYETPA---TFSAYDWSGAYIGA 55
Query: 61 SALY--------NGSFG--EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTV-PVLAD 108
+A + +G+ G ++ + + AGYN ++ G E D++Y +
Sbjct: 56 NAGWGFLSADGKSGASGALDDDQNGVTAGVHAGYNFMVAPSVVLGAEADIQYNDLEEKSA 115
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+ ++R R GY + D L+Y T G AG+ AIG G GVE
Sbjct: 116 GVELQSDWNATVRARAGYAL-DRTLVYGTGGAAFKDLTAKSSAGKDEKTAIGYVVGAGVE 174
Query: 169 VGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205
++++L ARLEY + K + N + GV MKF
Sbjct: 175 -HAVTDTLTARLEYLYQDFGDQKFDFGGTTEKTKIDENLVRAGVSMKF 221
>gi|156739552|gb|ABU93436.1| Omp25 [Brucella abortus]
Length = 123
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 64 YNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSL 113
Y G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 2 YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVK 61
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E L+
Sbjct: 62 QGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLT 119
Query: 174 ESLV 177
++++
Sbjct: 120 DNIL 123
>gi|254718340|ref|ZP_05180151.1| outer membrane protein [Brucella sp. 83/13]
gi|265983299|ref|ZP_06096034.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839562|ref|ZP_07472368.1| outer membrane protein [Brucella sp. NF 2653]
gi|264661891|gb|EEZ32152.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405348|gb|EFM61621.1| outer membrane protein [Brucella sp. NF 2653]
Length = 227
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 71/199 (35%), Gaps = 37/199 (18%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V +NG Y G Y ++ + G G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90
Query: 91 IMYGVEGDVRYTVPVLA---------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
++ G++GDV Y + + G++R R GY V D L Y G
Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDGNDAGSFENRLRWSGAVRARAGYAV-DRFLPYIAGGVA 149
Query: 142 VA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194
+ + + G T G G++ +++++ RLEYR + Y + +
Sbjct: 150 FGSLRNRGEFEDASFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDDA 208
Query: 195 --------NTISLGVGMKF 205
N I GV KF
Sbjct: 209 AVTNNFKTNDIRFGVAYKF 227
>gi|225626662|ref|ZP_03784701.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225618319|gb|EEH15362.1| Porin subfamily protein [Brucella ceti str. Cudo]
Length = 239
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 72/200 (36%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V + +NG Y G Y ++ + G G ++AGYN +
Sbjct: 42 PAPVVVALTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 101
Query: 91 IMYGVEGDVRYTVPVLADNI----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y + + G++R R GY V D L Y G
Sbjct: 102 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 160
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 161 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 219
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 220 AAVTNNFKTNDIRFGVAYKF 239
>gi|156739530|gb|ABU93425.1| Omp25 [Brucella suis]
gi|156739540|gb|ABU93430.1| Omp25 [Brucella abortus]
gi|156739558|gb|ABU93439.1| Omp25 [Brucella melitensis]
gi|156739590|gb|ABU93455.1| Omp25 [Brucella suis]
gi|156739594|gb|ABU93457.1| Omp25 [Brucella suis]
gi|156739614|gb|ABU93467.1| Omp25 [Brucella melitensis]
gi|156739630|gb|ABU93475.1| Omp25 [Brucella suis]
Length = 128
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPV 105
G Y GL Y G +A + GSI FAG+N + I+YGVEGD Y+
Sbjct: 1 GGYTGL---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAK 57
Query: 106 LA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
+ D + G GSLR R GY++ + ++ Y T G +Q + + +G TAG
Sbjct: 58 KSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAG 116
Query: 165 VGVEVGGLSESLV 177
G+E L+++++
Sbjct: 117 AGLEA-KLTDNIL 128
>gi|328542837|ref|YP_004302946.1| OmpA-like transmembrane domain [polymorphum gilvum SL003B-26A1]
gi|326412583|gb|ADZ69646.1| OmpA-like transmembrane domain, putative [Polymorphum gilvum
SL003B-26A1]
Length = 223
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 84/232 (36%), Gaps = 36/232 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L A ++ + A AAD + P I N+ R D++G Y G
Sbjct: 1 MKSLAAAGVSIAVLAGASLPAFAADLPQ-------PAQPVIYDNQVSSARFDWSGFYFGG 53
Query: 61 SALYNGS----------FGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTV-----P 104
+ + G + AGYN I+ G+E D + +
Sbjct: 54 NLGWGWGQFTTNSALTGRFNSDASGVNGGVHAGYNHAITPNIIAGLEADFQLSDLEKRRS 113
Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
V + + ++R R GY D ++Y T G +A + AIG T G
Sbjct: 114 VAGVGVKTSSDWNSTIRGRLGYAF-DRFMIYGTGGLAIADLEVAAAGSKGNETAIGWTLG 172
Query: 165 VGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205
G+E G +++++ ARLEY + + + + GV KF
Sbjct: 173 AGIE-GAVTDNVTARLEYLYQDFGRESFTLGGTRYRTDLDASIARFGVSYKF 223
>gi|148559219|ref|YP_001258157.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|46251231|gb|AAS84586.1| Omp25c [Brucella ovis]
gi|148370476|gb|ABQ60455.1| putative outer membrane protein [Brucella ovis ATCC 25840]
Length = 228
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 69/200 (34%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNG----------SFGEEAHHNAGGSIFAGYNVEDSC- 90
V +NG Y G Y G+ G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDPTDLGDIKPDGFLGGLYAGYNFDLGNS 90
Query: 91 IMYGVEGDVRYTVPVLADNI----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y + + G++R R GY V D L Y G
Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 150 AFGSLRNRGEFEGAGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228
>gi|17988112|ref|NP_540746.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501033|ref|NP_697160.1| outer membrane protein [Brucella suis 1330]
gi|62289100|ref|YP_220893.1| hypothetical protein BruAb1_0116 [Brucella abortus bv. 1 str.
9-941]
gi|82699038|ref|YP_413612.1| outer membrane protein [Brucella melitensis biovar Abortus 2308]
gi|161618107|ref|YP_001591994.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163842394|ref|YP_001626798.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189023375|ref|YP_001934143.1| outer membrane protein [Brucella abortus S19]
gi|225851659|ref|YP_002731892.1| outer membrane protein [Brucella melitensis ATCC 23457]
gi|254690429|ref|ZP_05153683.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|254694917|ref|ZP_05156745.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|254696123|ref|ZP_05157951.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700932|ref|ZP_05162760.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|254705300|ref|ZP_05167128.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|254707183|ref|ZP_05169011.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|254709272|ref|ZP_05171083.1| outer membrane protein [Brucella pinnipedialis B2/94]
gi|254713305|ref|ZP_05175116.1| outer membrane protein [Brucella ceti M644/93/1]
gi|254716341|ref|ZP_05178152.1| outer membrane protein [Brucella ceti M13/05/1]
gi|254731460|ref|ZP_05190038.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|256030795|ref|ZP_05444409.1| outer membrane protein [Brucella pinnipedialis M292/94/1]
gi|256045911|ref|ZP_05448785.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112625|ref|ZP_05453546.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|256158816|ref|ZP_05456677.1| outer membrane protein [Brucella ceti M490/95/1]
gi|256254201|ref|ZP_05459737.1| outer membrane protein [Brucella ceti B1/94]
gi|256258681|ref|ZP_05464217.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|256264830|ref|ZP_05467362.1| Omp25c [Brucella melitensis bv. 2 str. 63/9]
gi|260546397|ref|ZP_05822137.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563196|ref|ZP_05833682.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567237|ref|ZP_05837707.1| Omp25c [Brucella suis bv. 4 str. 40]
gi|260755976|ref|ZP_05868324.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260759200|ref|ZP_05871548.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260760488|ref|ZP_05872834.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884997|ref|ZP_05896611.1| Omp25c [Brucella abortus bv. 9 str. C68]
gi|261215251|ref|ZP_05929532.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|261218122|ref|ZP_05932403.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221349|ref|ZP_05935630.1| Omp25c [Brucella ceti B1/94]
gi|261314664|ref|ZP_05953861.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316778|ref|ZP_05955975.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321031|ref|ZP_05960228.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751447|ref|ZP_05995156.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261756010|ref|ZP_05999719.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|265987849|ref|ZP_06100406.1| Omp25c [Brucella pinnipedialis M292/94/1]
gi|265992323|ref|ZP_06104880.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1]
gi|265994065|ref|ZP_06106622.1| Omp25c [Brucella melitensis bv. 3 str. Ether]
gi|265997309|ref|ZP_06109866.1| Omp25c [Brucella ceti M490/95/1]
gi|297247516|ref|ZP_06931234.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|17983866|gb|AAL53010.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23346897|gb|AAN29075.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251229|gb|AAS84585.1| Omp25c [Brucella abortus]
gi|46251233|gb|AAS84587.1| Omp25c [Brucella canis]
gi|46251237|gb|AAS84589.1| Omp25c [Brucella pinnipedialis]
gi|46251239|gb|AAS84590.1| Omp25c [Brucella ceti]
gi|46251241|gb|AAS84591.1| Omp25c [Brucella ceti]
gi|46251243|gb|AAS84592.1| Omp25c [Brucella ceti]
gi|62195232|gb|AAX73532.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615139|emb|CAJ10072.1| outer membrane protein, putative [Brucella melitensis biovar
Abortus 2308]
gi|161334918|gb|ABX61223.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163673117|gb|ABY37228.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189018947|gb|ACD71669.1| outer membrane protein, putative [Brucella abortus S19]
gi|225640024|gb|ACN99937.1| outer membrane protein [Brucella melitensis ATCC 23457]
gi|260096504|gb|EEW80380.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153212|gb|EEW88304.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156755|gb|EEW91835.1| Omp25c [Brucella suis bv. 4 str. 40]
gi|260669518|gb|EEX56458.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260670923|gb|EEX57744.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260676084|gb|EEX62905.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260874525|gb|EEX81594.1| Omp25c [Brucella abortus bv. 9 str. C68]
gi|260916858|gb|EEX83719.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260919933|gb|EEX86586.1| Omp25c [Brucella ceti B1/94]
gi|260923211|gb|EEX89779.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293721|gb|EEX97217.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296001|gb|EEX99497.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303690|gb|EEY07187.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261741200|gb|EEY29126.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261745763|gb|EEY33689.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|262551777|gb|EEZ07767.1| Omp25c [Brucella ceti M490/95/1]
gi|262765046|gb|EEZ10967.1| Omp25c [Brucella melitensis bv. 3 str. Ether]
gi|263003389|gb|EEZ15682.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1]
gi|263095286|gb|EEZ18913.1| Omp25c [Brucella melitensis bv. 2 str. 63/9]
gi|264660046|gb|EEZ30307.1| Omp25c [Brucella pinnipedialis M292/94/1]
gi|289467873|gb|ADC95621.1| 25kDa outer membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. M5]
gi|297174685|gb|EFH34032.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|326408139|gb|ADZ65204.1| outer membrane protein, putative [Brucella melitensis M28]
gi|326537850|gb|ADZ86065.1| outer membrane protein [Brucella melitensis M5-90]
Length = 228
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V +NG Y G Y ++ + G G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90
Query: 91 IMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y + + G++R R GY V D L Y G
Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228
>gi|256368583|ref|YP_003106089.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915]
gi|255998741|gb|ACU47140.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915]
Length = 228
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V +NG Y G Y ++ + G G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90
Query: 91 IMYGVEGDVRYTV----------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y A + G++R R GY V D L Y G
Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAAAFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228
>gi|225627449|ref|ZP_03785486.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|260563986|ref|ZP_05834472.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M]
gi|260566481|ref|ZP_05836951.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40]
gi|261758166|ref|ZP_06001875.1| outer membrane protein 25b [Brucella sp. F5/99]
gi|265999479|ref|ZP_05466559.2| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9]
gi|294852320|ref|ZP_06792993.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|225617454|gb|EEH14499.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|260154002|gb|EEW89094.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M]
gi|260155999|gb|EEW91079.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40]
gi|261738150|gb|EEY26146.1| outer membrane protein 25b [Brucella sp. F5/99]
gi|263094215|gb|EEZ18092.1| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9]
gi|294820909|gb|EFG37908.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 243
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 38 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 97
Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ GV+GD+ Y + + S G++R R G + D + Y G
Sbjct: 98 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 156
Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 157 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 215
Query: 192 --------------GFYNTISLGVGMKF 205
+ I LGV KF
Sbjct: 216 SVVDGDLSVEARNKFKTHDIRLGVAYKF 243
>gi|156739528|gb|ABU93424.1| Omp25 [Brucella melitensis]
Length = 124
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 62 ALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIH 111
LY G +A + GSI FAG+N + I+YGVEGD Y+ + D +
Sbjct: 1 GLYLGYGWNKAKTSXVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLE 60
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 61 VKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 118
Query: 172 LSESLV 177
L+++++
Sbjct: 119 LTDNIL 124
>gi|156739520|gb|ABU93420.1| Omp25 [Brucella canis]
gi|156739522|gb|ABU93421.1| Omp25 [Brucella canis]
Length = 128
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPV 105
G Y GL Y G +A + GSI FAG+N + I+YGVEGD Y+
Sbjct: 1 GGYTGL---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAK 57
Query: 106 LA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
+ D + G GSLR R GY++ + ++ Y T G +Q + + +G TAG
Sbjct: 58 KSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAG 116
Query: 165 VGVEVGGLSESLV 177
G+E L+++++
Sbjct: 117 AGLEA-KLTDNIL 128
>gi|182677110|ref|YP_001831256.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
gi|182632993|gb|ACB93767.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
Length = 244
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 82/221 (37%), Gaps = 33/221 (14%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
L + S + +AS +A AAD RA +P + G Y G
Sbjct: 1 MLRTIIHSSIVIMASSVAALAADLPNRAAPPTVPYLPPSP-------AFSWTGVYLGGQI 53
Query: 63 LYNGSFGEEAH----------HNAGGSIFAGYNVEDSCIMYGVEGDVR---YTVPVLA-- 107
Y + G G+N + S + G EGDV Y+ V
Sbjct: 54 GYQFGRDSITAPGLFSVGHSPNGVVGGAHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPV 113
Query: 108 --DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-------ETGKAGEITPIA 158
+ S + GSLR R G D +L+YAT G A + +T
Sbjct: 114 FRTQLTSRIPVDGSLRGRIGAAW-DRVLVYATGGAAFASIKHGYIGSSLVPGSATLTNDR 172
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199
+G T G GVE ++++ R++YR + Y + F TI++
Sbjct: 173 VGWTVGGGVEY-AMTDNWSVRVDYRYTDYGNISDFPGTITV 212
>gi|306842592|ref|ZP_07475241.1| outer membrane protein [Brucella sp. BO2]
gi|306287237|gb|EFM58725.1| outer membrane protein [Brucella sp. BO2]
Length = 228
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V +NG Y G Y ++ + G G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90
Query: 91 IMYGVEGDVRYTVPVL----------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y A + G++R R GY V D L Y G
Sbjct: 91 VVLGIDGDVTYNDVSKKIDFLDENDAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGDKDYGFDD 208
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228
>gi|157310311|emb|CAN43867.1| outer membrane protein 25b [Brucella microti CCM 4915]
gi|157310313|emb|CAN43868.1| outer membrane protein 25b [Brucella microti]
Length = 245
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 40 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 99
Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ GV+GD+ Y + + S G++R R G + D + Y G
Sbjct: 100 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 158
Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 159 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 217
Query: 192 --------------GFYNTISLGVGMKF 205
+ I LGV KF
Sbjct: 218 SVVDGDLSVEARNKFKTHDIRLGVAYKF 245
>gi|156739532|gb|ABU93426.1| Omp25 [Brucella suis]
gi|156739566|gb|ABU93443.1| Omp25 [Brucella melitensis]
gi|156739572|gb|ABU93446.1| Omp25 [Brucella melitensis]
gi|156739576|gb|ABU93448.1| Omp25 [Brucella melitensis]
Length = 106
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132
+ FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + +
Sbjct: 4 DDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 62
Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
+ Y T G +Q + + +G TAG G+E L+++++
Sbjct: 63 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 106
>gi|260169699|ref|ZP_05756510.1| outer membrane protein [Brucella sp. F5/99]
gi|261759235|ref|ZP_06002944.1| outer membrane protein [Brucella sp. F5/99]
gi|261739219|gb|EEY27215.1| outer membrane protein [Brucella sp. F5/99]
Length = 228
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 72/200 (36%), Gaps = 38/200 (19%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90
V + +NG Y G Y ++ + G G ++AGYN +
Sbjct: 31 PAPVVVALTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90
Query: 91 IMYGVEGDVRYTVPVLADNI----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++ G++GDV Y + + G++R R GY V D L Y G
Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149
Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194
+ G + G T G G++ +++++ RLEYR + Y + +
Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208
Query: 195 ---------NTISLGVGMKF 205
N I GV KF
Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228
>gi|156739546|gb|ABU93433.1| Omp25 [Brucella abortus]
Length = 109
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYE 127
G + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+
Sbjct: 2 GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYD 61
Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
+ + ++ Y T G +Q + + +G TAG G+E L+++++
Sbjct: 62 L-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 109
>gi|17987290|ref|NP_539924.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501854|ref|NP_697981.1| outer membrane protein [Brucella suis 1330]
gi|163843239|ref|YP_001627643.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225852477|ref|YP_002732710.1| porin [Brucella melitensis ATCC 23457]
gi|254704272|ref|ZP_05166100.1| porin [Brucella suis bv. 3 str. 686]
gi|254706827|ref|ZP_05168655.1| porin [Brucella pinnipedialis M163/99/10]
gi|256061069|ref|ZP_05451225.1| porin [Brucella neotomae 5K33]
gi|256369396|ref|YP_003106904.1| outer membrane protein, putative [Brucella microti CCM 4915]
gi|260168691|ref|ZP_05755502.1| outer membrane protein, putative [Brucella sp. F5/99]
gi|261314294|ref|ZP_05953491.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10]
gi|261325071|ref|ZP_05964268.1| outer membrane protein 25b [Brucella neotomae 5K33]
gi|261754939|ref|ZP_05998648.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686]
gi|265991062|ref|ZP_06103619.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1]
gi|17982969|gb|AAL52188.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23347791|gb|AAN29896.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251214|gb|AAS84578.1| Omp25b [Brucella neotomae]
gi|163673962|gb|ABY38073.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225640842|gb|ACO00756.1| porin [Brucella melitensis ATCC 23457]
gi|255999556|gb|ACU47955.1| outer membrane protein, putative [Brucella microti CCM 4915]
gi|261301051|gb|EEY04548.1| outer membrane protein 25b [Brucella neotomae 5K33]
gi|261303320|gb|EEY06817.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10]
gi|261744692|gb|EEY32618.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686]
gi|263001846|gb|EEZ14421.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1]
gi|326408994|gb|ADZ66059.1| porin [Brucella melitensis M28]
Length = 236
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90
Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ GV+GD+ Y + + S G++R R G + D + Y G
Sbjct: 91 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 149
Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 150 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 208
Query: 192 --------------GFYNTISLGVGMKF 205
+ I LGV KF
Sbjct: 209 SVVDGDLSVEARNKFKTHDIRLGVAYKF 236
>gi|156739538|gb|ABU93429.1| Omp25 [Brucella abortus]
gi|156739542|gb|ABU93431.1| Omp25 [Brucella abortus]
gi|156739562|gb|ABU93441.1| Omp25 [Brucella melitensis]
gi|156739574|gb|ABU93447.1| Omp25 [Brucella melitensis]
gi|156739596|gb|ABU93458.1| Omp25 [Brucella suis]
gi|156739600|gb|ABU93460.1| Omp25 [Brucella suis]
gi|156739604|gb|ABU93462.1| Omp25 [Brucella suis]
gi|156739616|gb|ABU93468.1| Omp25 [Brucella melitensis]
gi|156739628|gb|ABU93474.1| Omp25 [Brucella abortus]
Length = 108
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYE 127
G + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+
Sbjct: 1 GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYD 60
Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
+ + ++ Y T G +Q + + +G TAG G+E L+++++
Sbjct: 61 L-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 108
>gi|118591879|ref|ZP_01549274.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
gi|118435522|gb|EAV42168.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
Length = 223
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 89/232 (38%), Gaps = 36/232 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L LA + A + AAD + VP + D+ G Y G
Sbjct: 1 MKRLALAGMALTAAATASAPVLAADLPQS-PAPAYEAVPAPQQSI------DWTGLYVGG 53
Query: 61 SALYN-GSFGEEAHHNAG---------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN 109
+ + G F +A +N G G ++ GYN + I+ G E D T + +
Sbjct: 54 NLGWAFGQFDNKAGNNTGLGVDANGIAGGLYTGYNFQVTPNIVVGAEADFSLTDLEKSKS 113
Query: 110 -----IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
+ S + R R GY D L+Y G +A +G + A+G T G
Sbjct: 114 NGGLTLRSKSDWNSNFRGRVGYAF-DRYLVYGAGGLAIADLEVSGNGDTDSKTALGWTLG 172
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYN-----------TISLGVGMKF 205
G E ++ ++ A+LEY + + + N + +G+G KF
Sbjct: 173 AGGEA-AITNNVTAKLEYVYQDFGEQDFNLNGTGVSSDFNNSQVRMGIGYKF 223
>gi|265994897|ref|ZP_06107454.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether]
gi|262766010|gb|EEZ11799.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether]
Length = 236
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 79/247 (31%), Gaps = 56/247 (22%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + S++ L + A+AAD V V +NG Y G
Sbjct: 2 TIKSLLLASTVVLVAATGAKAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 51
Query: 63 LYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA----- 107
Y + + G ++AGYN + + GV+GD+ Y +
Sbjct: 52 GYGWGHSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTD 111
Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGE 153
+ S G++R R G + D + Y G
Sbjct: 112 PDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVS 170
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTIS 198
+ G AG GV+ +++++ RLEYR + Y + + I
Sbjct: 171 QSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIR 229
Query: 199 LGVGMKF 205
LGV KF
Sbjct: 230 LGVAYKF 236
>gi|256044638|ref|ZP_05447542.1| porin [Brucella melitensis bv. 1 str. Rev.1]
gi|326538706|gb|ADZ86921.1| porin [Brucella melitensis M5-90]
Length = 240
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 35 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 94
Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ GV+GD+ Y + + S G++R R G + D + Y G
Sbjct: 95 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 153
Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 154 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 212
Query: 192 --------------GFYNTISLGVGMKF 205
+ I LGV KF
Sbjct: 213 SVVDGDLSVEARNKFKTHDIRLGVAYKF 240
>gi|156739524|gb|ABU93422.1| Omp25 [Brucella neotomae]
Length = 128
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPV 105
G Y GL Y G +A + GSI FAG+N + I+YGVEGD Y+
Sbjct: 1 GGYTGL---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAK 57
Query: 106 LA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
+ D + G GSLR R GY++ + ++ Y T G +Q + + +G TAG
Sbjct: 58 KSKDGLEVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAG 116
Query: 165 VGVEVGGLSESLV 177
G+E L+++++
Sbjct: 117 AGLEA-KLTDNIL 128
>gi|256113516|ref|ZP_05454350.1| porin [Brucella melitensis bv. 3 str. Ether]
Length = 240
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 79/247 (31%), Gaps = 56/247 (22%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + S++ L + A+AAD V V +NG Y G
Sbjct: 6 TIKSLLLASTVVLVAATGAKAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 55
Query: 63 LYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA----- 107
Y + + G ++AGYN + + GV+GD+ Y +
Sbjct: 56 GYGWGHSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTD 115
Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGE 153
+ S G++R R G + D + Y G
Sbjct: 116 PDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVS 174
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTIS 198
+ G AG GV+ +++++ RLEYR + Y + + I
Sbjct: 175 QSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIR 233
Query: 199 LGVGMKF 205
LGV KF
Sbjct: 234 LGVAYKF 240
>gi|256809485|gb|ACV30843.1| 25 kDa outer membrane protein [Ochrobactrum cytisi]
Length = 130
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V S+ L +A AAD ++ P + + ++ + G Y GL Y G
Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49
Query: 68 FGEEAHHNAGG---------SIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117
+A + G +AG+N + +YGVEGD Y+ D + G
Sbjct: 50 GWNKAKTDTVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109
Query: 118 GSLRIRGGYEVSDSLLLYATVG 139
GSLR R GY++ + ++ Y T G
Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130
>gi|156739536|gb|ABU93428.1| Omp25 [Brucella abortus]
Length = 105
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132
+ FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + +
Sbjct: 4 DDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 62
Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
+ Y T G +Q + + +G TAG G+E L++++
Sbjct: 63 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNI 105
>gi|218517219|ref|ZP_03514059.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 153
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 14/150 (9%)
Query: 68 FGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIR 123
G A + G +F AGYN + I+ G+EG++ Y G++R R
Sbjct: 6 GGASASEDFNGGVFGGFAGYNFQFDNIVVGIEGNLEYNWNEEEALGADVGTDWAGAVRGR 65
Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
GY D L+Y G + Y + T G T G GV+ ++ ++ AR EY
Sbjct: 66 VGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNNIFARGEY 123
Query: 183 RASKYS-------KVEGFYNTISLGVGMKF 205
R + Y V+ + + G+G+KF
Sbjct: 124 RYNDYGERDILGVDVDLDQHELKFGIGVKF 153
>gi|256809411|gb|ACV30806.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 22/142 (15%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V S+ L +A AAD ++ P + + ++ + G Y GL Y G
Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49
Query: 68 FGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117
+A + G++ +AG+N + +YGVEGD Y+ D + G
Sbjct: 50 GWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109
Query: 118 GSLRIRGGYEVSDSLLLYATVG 139
GSLR R GY++ + ++ Y T G
Sbjct: 110 GSLRARLGYDL-NPIMPYITAG 130
>gi|256809513|gb|ACV30857.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 22/142 (15%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V S+ L +A AAD ++ P + + ++ + G Y GL Y G
Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49
Query: 68 FGEEAHHNAGG---------SIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117
+A +A G +AG+N + +YGVEGD Y+ + D + G
Sbjct: 50 GWNKAKTDAVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKDGLEVKQGFE 109
Query: 118 GSLRIRGGYEVSDSLLLYATVG 139
GSLR R GY++ + ++ Y T G
Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130
>gi|256809429|gb|ACV30815.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809431|gb|ACV30816.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809433|gb|ACV30817.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809435|gb|ACV30818.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809437|gb|ACV30819.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809439|gb|ACV30820.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809441|gb|ACV30821.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809443|gb|ACV30822.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809445|gb|ACV30823.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809519|gb|ACV30860.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809521|gb|ACV30861.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809525|gb|ACV30863.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809539|gb|ACV30870.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V S+ L +A AAD ++ P + + ++ + G Y GL Y +
Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGLYLGYGWN 52
Query: 68 ------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSL 120
G + +AG+N + +YGVEGD Y+ D + G GSL
Sbjct: 53 KVKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSL 112
Query: 121 RIRGGYEVSDSLLLYATVG 139
R R GY++ + ++ Y T G
Sbjct: 113 RARLGYDL-NPVMPYITAG 130
>gi|256809401|gb|ACV30801.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809403|gb|ACV30802.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809405|gb|ACV30803.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809407|gb|ACV30804.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809409|gb|ACV30805.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809413|gb|ACV30807.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809415|gb|ACV30808.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809417|gb|ACV30809.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809419|gb|ACV30810.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809421|gb|ACV30811.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809423|gb|ACV30812.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809425|gb|ACV30813.1| 25 kDa outer membrane protein [Ochrobactrum lupini]
gi|256809427|gb|ACV30814.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809447|gb|ACV30824.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809449|gb|ACV30825.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809451|gb|ACV30826.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809453|gb|ACV30827.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809455|gb|ACV30828.1| 25 kDa outer membrane protein [Ochrobactrum anthropi ATCC 49188]
gi|256809457|gb|ACV30829.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809459|gb|ACV30830.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809461|gb|ACV30831.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809463|gb|ACV30832.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809465|gb|ACV30833.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809467|gb|ACV30834.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809469|gb|ACV30835.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809471|gb|ACV30836.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809473|gb|ACV30837.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809475|gb|ACV30838.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809477|gb|ACV30839.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809479|gb|ACV30840.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809481|gb|ACV30841.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809483|gb|ACV30842.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809487|gb|ACV30844.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809489|gb|ACV30845.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809491|gb|ACV30846.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809493|gb|ACV30847.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809495|gb|ACV30848.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809497|gb|ACV30849.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809499|gb|ACV30850.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809501|gb|ACV30851.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809503|gb|ACV30852.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809505|gb|ACV30853.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809507|gb|ACV30854.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809509|gb|ACV30855.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809511|gb|ACV30856.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809515|gb|ACV30858.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809517|gb|ACV30859.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809523|gb|ACV30862.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809527|gb|ACV30864.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809529|gb|ACV30865.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809531|gb|ACV30866.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809533|gb|ACV30867.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809535|gb|ACV30868.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 22/142 (15%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V S+ L +A AAD ++ P + + ++ + G Y GL Y G
Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49
Query: 68 FGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117
+A + G++ +AG+N + +YGVEGD Y+ D + G
Sbjct: 50 GWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109
Query: 118 GSLRIRGGYEVSDSLLLYATVG 139
GSLR R GY++ + ++ Y T G
Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130
>gi|256254959|ref|ZP_05460495.1| porin [Brucella ceti B1/94]
gi|261222144|ref|ZP_05936425.1| Omp25b [Brucella ceti B1/94]
gi|265998108|ref|ZP_06110665.1| Omp25b [Brucella ceti M490/95/1]
gi|46251220|gb|AAS84581.1| Omp25b [Brucella ceti]
gi|46251222|gb|AAS84582.1| Omp25b [Brucella ceti]
gi|260920728|gb|EEX87381.1| Omp25b [Brucella ceti B1/94]
gi|262552576|gb|EEZ08566.1| Omp25b [Brucella ceti M490/95/1]
Length = 236
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 31/179 (17%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90
Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ GV+GD+ Y + + S G++R R G + D + Y G
Sbjct: 91 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 149
Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 150 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKD 207
>gi|156739580|gb|ABU93450.1| Omp25 [Brucella canis]
Length = 105
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132
+ FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + +
Sbjct: 3 DDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 61
Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
+ Y T G +Q + + +G TAG G+E L+++++
Sbjct: 62 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 105
>gi|158425585|ref|YP_001526877.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332474|dbj|BAF89959.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 212
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 80/217 (36%), Gaps = 26/217 (11%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
+ V + +L A AAD R A A+ P + G Y G + Y
Sbjct: 5 VLVTGALASLLFAAPAMAADLSRPAPAM-------PASAVSAPPVFSWTGFYIGANTGYA 57
Query: 66 GSFGEEAHHNAG-------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116
G+ + G G GYN + + ++ G+E DV+ + + S
Sbjct: 58 WGSGKGSADALGLDPDGWFGGGQVGYNYQFQNNMLVGLEADVQGGGISAGNGPVSSKLES 117
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
G++R R GY V D +L Y T G T + G T G GVE L+ +
Sbjct: 118 FGTVRARLGYAV-DRVLPYVTGGFAWGNNKITDFGTSQSQTLTGWTVGGGVEY-ALTNNW 175
Query: 177 VARLEYRASKYSKVEGF--------YNTISLGVGMKF 205
AR EY + K + +T LGV KF
Sbjct: 176 TARAEYLYTDLGKADYKALGEAGVAASTARLGVNYKF 212
>gi|256159691|ref|ZP_05457444.1| porin [Brucella ceti M490/95/1]
Length = 240
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 31/179 (17%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 35 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 94
Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ GV+GD+ Y + + S G++R R G + D + Y G
Sbjct: 95 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 153
Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 154 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKD 211
>gi|156739612|gb|ABU93466.1| Omp25 [Brucella canis]
Length = 104
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132
+ FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + +
Sbjct: 2 DDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 60
Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
+ Y T G +Q + + +G TAG G+E L+++++
Sbjct: 61 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 104
>gi|90422419|ref|YP_530789.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
gi|90104433|gb|ABD86470.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
Length = 207
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 25/197 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPI-RHDFNGPYAGLSALYNGSFGEEAHH- 74
SAQAAD Y P+ H + GPY G + Y +
Sbjct: 15 GLSSAQAADLPYGGSR--------APYTVYQPLNAHSWAGPYLGGNLGYAWGDVHNSATE 66
Query: 75 --NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEV 128
G + AGYN + +YG+EGD+ T AD+ + G++R R GY
Sbjct: 67 PSGVAGGVQAGYNWQSGQFVYGLEGDIAITG---ADDTFASWKFSNPWFGTVRGRAGYSF 123
Query: 129 SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
D+LL+YAT G + + G T G G E GL+++ A++EY
Sbjct: 124 -DNLLVYATGGLAFGELKGERFGQSNSSTNAGWTIGAGAEF-GLNQNWSAKVEYLYVDLG 181
Query: 189 ----KVEGFYNTISLGV 201
+ G N+ G+
Sbjct: 182 GSNFSITGVQNSYQFGI 198
>gi|254701730|ref|ZP_05163558.1| porin [Brucella suis bv. 5 str. 513]
gi|261752281|ref|ZP_05995990.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513]
gi|261742034|gb|EEY29960.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513]
Length = 236
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 65/208 (31%), Gaps = 46/208 (22%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90
Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ GV+GD+ Y + + S G++R R + D + Y G
Sbjct: 91 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMSVAM-DRWMPYIAGGV 149
Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 150 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 208
Query: 192 --------------GFYNTISLGVGMKF 205
+ I LGV KF
Sbjct: 209 SVVDGDLSVEARNKFKTHDIRLGVAYKF 236
>gi|156739534|gb|ABU93427.1| Omp25 [Brucella suis]
gi|156739618|gb|ABU93469.1| Omp25 [Brucella melitensis]
Length = 98
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T
Sbjct: 1 GAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLT 59
Query: 138 VGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
G +Q + + +G TAG G+E L+++++
Sbjct: 60 AGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 98
>gi|256809537|gb|ACV30869.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V + L +A AAD ++ P + ++ + G Y GL Y G
Sbjct: 1 VIALAALLPFSATAFAADAIQEQ--------PPVPAPVEKAPQYSWAGGYTGL---YLGY 49
Query: 68 FGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117
+A + G++ +AG+N + +YGVEGD Y+ D + G
Sbjct: 50 GWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109
Query: 118 GSLRIRGGYEVSDSLLLYATVG 139
GSLR R GY++ + ++ Y T G
Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130
>gi|85716040|ref|ZP_01047017.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
gi|85697238|gb|EAQ35119.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
Length = 206
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 16/195 (8%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M K +A + + A +AQAAD RA + + + GPY G
Sbjct: 1 MSKTLIAALATMASTALIGTAQAADFSYRAPYTVNQPL----------NAFSWAGPYLGG 50
Query: 61 SALYNGSFGEEA---HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+ Y + + G + AGYN + +++G+EGD++ +
Sbjct: 51 NLGYAWGSVQNSLTKPDGVFGGVQAGYNWQSGSMVFGLEGDIQANAANDTFAAWKFSNPW 110
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
G++R R GY S+ +L+Y T G + A + G T GVG EV G+ ++
Sbjct: 111 FGTVRGRLGYAFSN-VLVYGTGGLAFGKLRAETFALSESHTNAGWTVGVGAEV-GIYQNW 168
Query: 177 VARLEYRASKYSKVE 191
A++EY S
Sbjct: 169 TAKVEYLYVDLSSSN 183
>gi|153007477|ref|YP_001368692.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151559365|gb|ABS12863.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 80/241 (33%), Gaps = 51/241 (21%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
K + +G S LA+ + A AAD + + G Y G
Sbjct: 2 KFRILLGASLLAVVASTGAYAADAIVSQEPAPM-----------AAPAFSWGGAYIGGEI 50
Query: 63 LYNGSFG-----------EEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADN- 109
+ E + G ++AGYN + ++ GV+G+ Y + +
Sbjct: 51 GWGWGRAKLDDKSTDQSNEFKPNGFIGGVYAGYNFDMGNNVILGVDGNFDYNDLKKSHDY 110
Query: 110 ----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG----EIT 155
+ G++R R GY V D + Y G + G
Sbjct: 111 ISNSNAVQTSAETKLQWSGAVRARAGYAV-DRFMPYIAGGVAFGGVKNSLNVGGSDYNND 169
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF-----------YNTISLGVGMK 204
G T G GV+ +++++ RLEYR + + + N I LGV K
Sbjct: 170 KTLTGWTVGTGVDYAA-TDNVLLRLEYRYTDFGNKDFDLGNTATRGSFKTNDIRLGVAYK 228
Query: 205 F 205
F
Sbjct: 229 F 229
>gi|306841014|ref|ZP_07473744.1| outer membrane protein Omp31 [Brucella sp. BO2]
gi|306846349|ref|ZP_07478900.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306273192|gb|EFM55083.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306288964|gb|EFM60252.1| outer membrane protein Omp31 [Brucella sp. BO2]
Length = 239
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 82/250 (32%), Gaps = 64/250 (25%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S A+ SA AAD + + G Y G++A Y G
Sbjct: 3 SVLLASFAMLFASSAMAADAIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50
Query: 67 SFG-------------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVR 100
+ G + AGYN + D+ + G E D +
Sbjct: 51 GKFKHPFSVAGLPTAGMNEEGGALSGSLDVTSSGFVGGVQAGYNWQLDNGFVLGAEADFQ 110
Query: 101 YT---------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK- 150
+ + L N + G++R R GY ++ LL+Y T G + +
Sbjct: 111 GSTVKGDISAHLDDLDGNAETKVEWFGTVRARLGYTATERLLVYGTGGLAYGKVKSSLGI 170
Query: 151 ---AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------N 195
+ G T G G E ++ + + EY + K + +
Sbjct: 171 EDWGVSSSKTKAGWTVGAGAEY-AINNNWTLKSEYLYTDLGKHDLINVNELSLKNDVKFH 229
Query: 196 TISLGVGMKF 205
T+ +G+ KF
Sbjct: 230 TVRVGLNYKF 239
>gi|115522948|ref|YP_779859.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115516895|gb|ABJ04879.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 207
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 65/179 (36%), Gaps = 13/179 (7%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH--- 73
SAQAAD + V + + + GPY G + Y
Sbjct: 15 GLVSAQAADLSYGRSYAPYTVNQPLN-------AYSWAGPYLGGNLGYAWGDIHNNSAKP 67
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-IGGSLRIRGGYEVSDSL 132
G I GYN + ++YG+EGD++ T + G++R R GY +++
Sbjct: 68 SGLSGGIQGGYNWQSGQMVYGLEGDLQITGANDTFAQYKFSNPWFGTVRGRIGYAF-NNV 126
Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+ Y T G + + G T G G E GL + A++EY +
Sbjct: 127 MFYGTGGLAYGELTAEMGGLSQSHTNAGFTVGAGAEF-GLMPNWTAKIEYLYVDLGESN 184
>gi|148558438|ref|YP_001257410.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840]
gi|16611666|gb|AAL27291.1|AF366068_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611669|gb|AAL27292.1|AF366069_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611672|gb|AAL27293.1|AF366070_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611675|gb|AAL27294.1|AF366071_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611678|gb|AAL27295.1|AF366072_1 outer membrane protein Omp31 [Brucella ovis]
gi|148369723|gb|ABQ62595.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840]
Length = 240
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 83/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRY----- 101
+ G + AGYN + D+ ++ G E D +
Sbjct: 54 GKFKHPFSSFDKEDGEHVSGSPDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGLSVTG 113
Query: 102 ----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L N + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASSLEGNAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDAPA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|163844591|ref|YP_001622246.1| hypothetical protein BSUIS_B0425 [Brucella suis ATCC 23445]
gi|16611654|gb|AAL27287.1|AF366064_1 outer membrane protein Omp31 [Brucella suis ATCC 23445]
gi|163675314|gb|ABY39424.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 240
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFSSFDKEDIEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWPDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|161620493|ref|YP_001594379.1| porin [Brucella canis ATCC 23365]
gi|16611681|gb|AAL27296.1|AF366073_1 outer membrane protein Omp31 [Brucella canis]
gi|161337304|gb|ABX63608.1| porin [Brucella canis ATCC 23365]
Length = 240
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V P+ T V + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 PISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|256111680|ref|ZP_05452664.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 3
str. Ether]
gi|265993151|ref|ZP_06105708.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|16611648|gb|AAL27285.1|AF366062_1 outer membrane protein Omp31 [Brucella melitensis]
gi|262764021|gb|EEZ10053.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
Length = 240
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V P+ T V + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHMWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|75676711|ref|YP_319132.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
gi|74421581|gb|ABA05780.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
Length = 206
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 16/195 (8%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M ++ +A + + A +A AAD RA + + + GPY G
Sbjct: 1 MTRITIAALAAMASTALIGAAHAADFSYRAPYTVNQPL----------DAFSWAGPYLGG 50
Query: 61 SALYNGSFGEEA---HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116
+ Y + + G + AG+N + +++G+EGD++ +
Sbjct: 51 NLGYAWGSVQNSLTRPDGVFGGVQAGFNWQSGPVVFGLEGDIQANAANDTFAAWKFSNPW 110
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
G++R R GY +++L+Y T G + + + G T GVG EV G+ ++
Sbjct: 111 FGTVRGRIGYAF-NNVLVYGTGGLAFGKLRAETFGLSESHTSAGWTVGVGAEV-GIYQNW 168
Query: 177 VARLEYRASKYSKVE 191
A++EY S
Sbjct: 169 TAKVEYLYVDLSSSS 183
>gi|254706065|ref|ZP_05167893.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
M163/99/10]
gi|261313502|ref|ZP_05952699.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M163/99/10]
gi|261302528|gb|EEY06025.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M163/99/10]
Length = 240
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V P+ T V + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFFSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|23500173|ref|NP_699613.1| outer membrane protein [Brucella suis 1330]
gi|225628865|ref|ZP_03786899.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225686232|ref|YP_002734204.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|254699679|ref|ZP_05161507.1| outer membrane protein Omp31 precursor [Brucella suis bv. 5 str.
513]
gi|254702817|ref|ZP_05164645.1| outer membrane protein Omp31 precursor [Brucella suis bv. 3 str.
686]
gi|254711636|ref|ZP_05173447.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
B2/94]
gi|254712249|ref|ZP_05174060.1| outer membrane protein Omp31 precursor [Brucella ceti M644/93/1]
gi|254715320|ref|ZP_05177131.1| outer membrane protein Omp31 precursor [Brucella ceti M13/05/1]
gi|256015206|ref|YP_003105215.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|256029730|ref|ZP_05443344.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
M292/94/1]
gi|256043319|ref|ZP_05446254.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 1
str. Rev.1]
gi|256059364|ref|ZP_05449566.1| outer membrane protein Omp31 precursor [Brucella neotomae 5K33]
gi|256157882|ref|ZP_05455800.1| outer membrane protein Omp31 precursor [Brucella ceti M490/95/1]
gi|256253156|ref|ZP_05458692.1| outer membrane protein Omp31 precursor [Brucella ceti B1/94]
gi|256262636|ref|ZP_05465168.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|260167181|ref|ZP_05753992.1| outer membrane protein, 31 kDa [Brucella sp. F5/99]
gi|260564527|ref|ZP_05835012.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|261217050|ref|ZP_05931331.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261220262|ref|ZP_05934543.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261319260|ref|ZP_05958457.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261319920|ref|ZP_05959117.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261323324|ref|ZP_05962521.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261750144|ref|ZP_05993853.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261753417|ref|ZP_05997126.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261756585|ref|ZP_06000294.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265986741|ref|ZP_06099298.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265989742|ref|ZP_06102299.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265996391|ref|ZP_06108948.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|61229373|sp|P0A3U4|OM31_BRUME RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|61229374|sp|P0A3U5|OM31_BRUSU RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|16611645|gb|AAL27284.1|AF366061_1 outer membrane protein Omp31 [Brucella melitensis]
gi|16611651|gb|AAL27286.1|AF366063_1 outer membrane protein Omp31 [Brucella suis 1330]
gi|16611657|gb|AAL27288.1|AF366065_1 outer membrane protein Omp31 [Brucella suis]
gi|16611663|gb|AAL27290.1|AF366067_1 outer membrane protein Omp31 [Brucella suis]
gi|16611684|gb|AAL27297.1|AF366074_1 outer membrane protein Omp31 [Brucella neotomae]
gi|1457933|gb|AAB36693.1| outer membrane protein [Brucella melitensis]
gi|23463773|gb|AAN33618.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251186|gb|AAS84564.1| Omp31 [Brucella ceti]
gi|46251188|gb|AAS84565.1| Omp31 [Brucella pinnipedialis]
gi|46251190|gb|AAS84566.1| Omp31 [Brucella ceti]
gi|46251192|gb|AAS84567.1| Omp31 [Brucella ceti]
gi|157310315|emb|CAN43870.1| outer membrane protein 31 [Brucella microti CCM 4915]
gi|157310317|emb|CAN43872.1| outer membrane protein 31 [Brucella microti]
gi|225616711|gb|EEH13759.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225642337|gb|ACO02250.1| outer membrane protein Omp31 precursor [Brucella melitensis ATCC
23457]
gi|226433917|gb|ACO56077.1| Omp31 [Brucella melitensis]
gi|240265888|gb|ACS50328.1| Omp31 [Brucella melitensis]
gi|255997866|gb|ACU49553.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|260152170|gb|EEW87263.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|260918846|gb|EEX85499.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260922139|gb|EEX88707.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261292610|gb|EEX96106.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261298483|gb|EEY01980.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261299304|gb|EEY02801.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261736569|gb|EEY24565.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261739897|gb|EEY27823.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261743170|gb|EEY31096.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262550688|gb|EEZ06849.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|263000411|gb|EEZ13101.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092421|gb|EEZ16674.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|264658938|gb|EEZ29199.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 240
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V P+ T V + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|260568272|ref|ZP_05838741.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
gi|16611660|gb|AAL27289.1|AF366066_1 outer membrane protein Omp31 [Brucella suis]
gi|260154937|gb|EEW90018.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
Length = 240
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDATAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|256682107|gb|ACV07678.1| OMP31 [Brucella melitensis]
Length = 240
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 83/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ +++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERVMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|92118614|ref|YP_578343.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
gi|91801508|gb|ABE63883.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 22/179 (12%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH---HNA 76
+AQAAD R+ + + + + GPY G + Y + + +
Sbjct: 20 TAQAADFSYRSPYTVNQPL----------NAYSWAGPYLGGNLGYAWGSVQNSATKPNGV 69
Query: 77 GGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSL 132
G + AGYN + +++G+EGD++ AD+I + G++R R GY +++
Sbjct: 70 FGGVQAGYNWQSGPLVFGLEGDIQAN---AADDIFARWKFSNPWFGTVRGRLGYAF-NNV 125
Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G + G T GVG E G+ ++ A++EY S
Sbjct: 126 LIYGTGGLAFGALRAETFGLSESHTNAGWTVGVGAEF-GIYQNWTAKVEYLYVDLSSSN 183
>gi|306845687|ref|ZP_07478256.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|206596728|emb|CAQ68394.1| outer membrane protein 31 [Brucella sp. BO1]
gi|306274008|gb|EFM55835.1| outer membrane protein Omp31 [Brucella sp. BO1]
Length = 240
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 79/248 (31%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT---- 102
G + AGYN + ++ G E D + +
Sbjct: 54 GKFKHPFSAFDTDDNERVSGSLNITSGGFVGGVQAGYNWQFDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISADAGGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDVSA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNHWTLKSEYLYTDLGKRNLINVDDSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|298292421|ref|YP_003694360.1| porin [Starkeya novella DSM 506]
gi|296928932|gb|ADH89741.1| porin [Starkeya novella DSM 506]
Length = 215
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 59/185 (31%), Gaps = 22/185 (11%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-------HNAGGSIFAGYNVE-DSCIM 92
+ G Y G +A Y G+E G G+N + D+ ++
Sbjct: 33 APPAVIAEPVFSWTGFYLGANAGYAWGSGQEGAETLGLDPDGFLGGGQIGFNYQFDNNVV 92
Query: 93 YGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK- 150
G E D + + S G++R R GY + +L Y T G K
Sbjct: 93 LGAEADFQGSDIKDERLGFESKMDYFGTVRARLGYAFGN-VLPYVTGGLAWGHTEVNDKL 151
Query: 151 -AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS---------KVEGFYNTISLG 200
A+G T G GVE + + + EY K N + G
Sbjct: 152 LGLTSDKTAVGWTVGGGVEY-AFTNNWTVKAEYLYMDLGDDYYASIGDKSGLTANVVRAG 210
Query: 201 VGMKF 205
+ KF
Sbjct: 211 INYKF 215
>gi|27382580|ref|NP_774109.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355752|dbj|BAC52734.1| bll7469 [Bradyrhizobium japonicum USDA 110]
Length = 208
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 20/179 (11%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHN 75
SA+AAD P A + + GPY G + Y +
Sbjct: 19 ASAEAADLSYGQRAPYTVNQPLNA--------YSWAGPYLGGNIGYEWGSVDNNPSKPSG 70
Query: 76 AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDS 131
G I AGYN ++ ++GVEGD++ AD+ + G+LR R GY S+
Sbjct: 71 FVGGIQAGYNFQNGPWVFGVEGDIQ---AAGADDTFAPWKFSNPWFGTLRGRVGYAFSN- 126
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
+L Y T G + + + G T G G EV GL+ + A+LEY S
Sbjct: 127 VLFYGTAGLAFGELRAQTFGWTESHTSAGWTIGAGAEV-GLAPNWSAKLEYLYIDLSTS 184
>gi|148253259|ref|YP_001237844.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405432|gb|ABQ33938.1| putative outer membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 206
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/202 (24%), Positives = 77/202 (38%), Gaps = 18/202 (8%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
VG + A SAQAAD + GR T+ + + GPY G + Y
Sbjct: 6 VGAAVAAALGSVSAQAAD-----FNYGRQAPYTVNQPLN---AYSWAGPYLGGTLGYEWG 57
Query: 68 F---GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-HSLHGIGGSLRIR 123
G + AGYN ++ ++G EGD+ T + G++R R
Sbjct: 58 SVGNNPTKPSGLVGGLTAGYNWQNGPWVFGAEGDINLTGANDTFAPWKFSNPWFGTVRGR 117
Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183
GY +++L Y T G + ++G T G G E GL+++ A++EY
Sbjct: 118 AGYAF-NNILFYGTGGLAFGGLRGETFGLSESHTSLGWTLGAGAEF-GLAQNWTAKIEYL 175
Query: 184 ASKYSK----VEGFYNTISLGV 201
+ G N GV
Sbjct: 176 YIDLDSSNFVITGAKNDYRFGV 197
>gi|299134246|ref|ZP_07027439.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
gi|298590993|gb|EFI51195.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
Length = 209
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 25/174 (14%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHN-----AGGSIFAGYNVEDSC-IMYGVEGDVRYTVP 104
+ + GPY G + YN FG+ ++ G I GYN + + G+E D++ T
Sbjct: 42 YSWAGPYLGANLGYN--FGDVSNSGTSPSGFSGGIQGGYNWQFGTPWVLGLEADLQATG- 98
Query: 105 VLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
AD+ + G++R R GY ++ + ++Y T G Q T T G
Sbjct: 99 --ADDTFAAWKFSNPWYGTIRGRVGYAINPNFMIYGTGGLAFGQLKGTMPGLSETHTTAG 156
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGF---------YNTISLGVGMKF 205
T G G E L+ + + EY ++T+ +GV F
Sbjct: 157 WTVGGGAEF-ALTNNWSLKAEYMYVDLDSSNFLITGLPNGYQFSTVRVGVNYHF 209
>gi|13471424|ref|NP_102990.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022166|dbj|BAB48776.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 225
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 78/231 (33%), Gaps = 55/231 (23%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----- 67
A +A AAD V +++ G Y G S
Sbjct: 12 FAALMAGTALAADATVELP---------------VASSYNWTGGYIGAQIGGGWSKVDQP 56
Query: 68 ----------FGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS--- 112
F ++ +G G + AGYN + ++G E D+ T D
Sbjct: 57 WGFTEASPNIFDQDNADGSGVVGGLHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDI 116
Query: 113 ---LHGIGGSLRIRGGYEVSDSLLLYATVGPD----VAQKYETGKAGEITPIAIGGTAGV 165
S+R R G+ D +L+Y T G A + G+ + G T G
Sbjct: 117 NGFKARWVASVRARAGFAF-DRVLIYGTGGYAYLNGKADTRDVGRQESHSASFNGWTIGA 175
Query: 166 GVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205
G E L++++ R EYR + + + +T+++GV KF
Sbjct: 176 GAEY-ALTDNITVRGEYRYADFGSKTVVFNNYVEDISPALHTVTIGVSYKF 225
>gi|39934247|ref|NP_946523.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39648095|emb|CAE26615.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 226
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 19/199 (9%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+ + + +++ AS +AQAAD + V + + GPY G +
Sbjct: 19 KMRKVTLAAAAVIAASVSTAQAADMGYYRSNAPYTVNQPLN-------AFSWAGPYLGGN 71
Query: 62 ALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG- 117
Y+ + G + GYN + I++G+EGD++++ AD+ + +
Sbjct: 72 LGYSWGNVTNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFS---TADDTFAQYKFSN 128
Query: 118 ---GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ R R GY ++D +L+YAT G Q + + G T G G E +
Sbjct: 129 PWFGTGRGRIGYAMND-VLIYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAP 186
Query: 175 SLVARLEYRASKYSKVEGF 193
L A++EY S F
Sbjct: 187 KLSAKVEYLYMSLSTSNFF 205
>gi|254720536|ref|ZP_05182347.1| outer membrane protein Omp31 precursor [Brucella sp. 83/13]
gi|265985569|ref|ZP_06098304.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838097|ref|ZP_07470954.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
gi|264664161|gb|EEZ34422.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306406834|gb|EFM63056.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
Length = 240
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 82/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ + G E D + +
Sbjct: 54 GKFKHPFSTFDTEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGGVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RIGLNYKF 240
>gi|86748303|ref|YP_484799.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86571331|gb|ABD05888.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 207
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 19/195 (9%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+KL +A A +AQAAD + G T+ + GPY G
Sbjct: 1 MRKLAMAAATVIAATG--STAQAAD----MGYYGSRTPYTVNQPLN---AFSWAGPYLGG 51
Query: 61 SALYNGSFGEEAHH-----NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG 115
+ Y +FG ++ G + GYN + I++G+EGD++++ +
Sbjct: 52 NLGY--AFGNVTNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFSTANDTFASYKFSN 109
Query: 116 -IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ R R GY ++D +LLYAT G Q + + G T G G E +
Sbjct: 110 PWFGTARGRVGYAMND-ILLYATGGLAFGQLKGEYLLSSESHTSAGWTVGAGAEF-AFAP 167
Query: 175 SLVARLEYRASKYSK 189
L A++EY S
Sbjct: 168 KLSAKVEYLYGSLST 182
>gi|209886326|ref|YP_002290183.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874522|gb|ACI94318.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 208
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 19/170 (11%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHN---AGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106
+ GPY G + YN + N G + GYN + ++G+E D++ T
Sbjct: 43 FSWAGPYLGANLGYNWGSVSNSGTNPTGFAGGVQGGYNWQFGSPWVFGLEADIQATG--- 99
Query: 107 ADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGT 162
AD+ + G++R R GY ++ + +LY T G + + + ++ G T
Sbjct: 100 ADDTFAAWKFSNPWYGTVRGRVGYALNPNFMLYGTGGLAFGELKGSTPFYSASHVSAGWT 159
Query: 163 AGVGVEVGGLSESLVARLEYRASKY--SKVEGFYN-----TISLGVGMKF 205
G G E L+ + + EY S + G N T+ +GV F
Sbjct: 160 VGAGAEF-ALNNAWSLKAEYLYVDLDSSNINGLPNGYNFSTVRVGVNYHF 208
>gi|192289773|ref|YP_001990378.1| outer-membrane immunogenic protein precursor [Rhodopseudomonas
palustris TIE-1]
gi|192283522|gb|ACE99902.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris TIE-1]
Length = 207
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 19/196 (9%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ + +++ AS +AQAAD + V + + GPY G + Y
Sbjct: 3 KVTLAAAAVIAASVSTAQAADMGYYRSNAPYTVNQPLN-------AFSWAGPYLGGNLGY 55
Query: 65 NG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG---- 117
+ + G + GYN + I++G+EGD++++ AD+ + +
Sbjct: 56 SWGNVTNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFS---TADDTFAQYKFSNPWF 112
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
G+ R R GY ++D +L+YAT G Q + + G T G G E + L
Sbjct: 113 GTGRGRIGYAMND-VLIYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAPKLS 170
Query: 178 ARLEYRASKYSKVEGF 193
A++EY S F
Sbjct: 171 AKVEYLYMSLSTSNFF 186
>gi|316932716|ref|YP_004107698.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600430|gb|ADU42965.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris DX-1]
Length = 207
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ + +++ A +AQAAD + V + + GPY G + Y
Sbjct: 3 KVTLAAAAMIAAGMSTAQAADMGYYRSNAPYTVNQPLN-------AFSWAGPYLGGNLGY 55
Query: 65 NGSFGEEAHH-----NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG-- 117
+G ++ G + GYN + I++G+EGD++++ AD+ + +
Sbjct: 56 --GWGNVTNNITKPSGFSGGLQGGYNWQSGNIVFGLEGDIQFS---TADDTFAPYKFSNP 110
Query: 118 --GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
G+ R R GY ++D +L+YAT G Q A + + G T G G E +
Sbjct: 111 WFGTGRGRIGYAMND-VLIYATGGLAFGQLKGQNLAVSESHSSAGWTVGAGAEF-AFAPK 168
Query: 176 LVARLEYRASKYSK 189
L A++EY S
Sbjct: 169 LSAKVEYLYMSLST 182
>gi|217977074|ref|YP_002361221.1| porin [Methylocella silvestris BL2]
gi|217502450|gb|ACK49859.1| porin [Methylocella silvestris BL2]
Length = 254
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 84/251 (33%), Gaps = 59/251 (23%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
L + S A+A +A AAD RA I + G Y G
Sbjct: 2 MLRRLLLASVGAVALAGTAFAADLPSRAPPPVYVPPAPI---------FTWTGVYIGGQI 52
Query: 63 LYN-------------GSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
Y G+ G ++ +G G GYN++ S + G+EG V + +
Sbjct: 53 GYAWGTQNANFGDSFIGTLGSVSYDTSGVLGGAHVGYNLQLSQFVVGLEGSVDGSSMSKS 112
Query: 108 D----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA----GE 153
+ + I GS+R R GY D +LLYAT G A
Sbjct: 113 AFLTDEFGNSLTLSAQSNIQGSIRGRVGYAW-DRVLLYATGGVAFAGVKANFYGPFSYDS 171
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF-------------------Y 194
+ +G T G G+E ++ + R EYR S + +
Sbjct: 172 ASSTRVGWTVGGGLEY-AVTNNWSVRAEYRYSDFGHSTFYPSNYGSVVLTSPFINRHFKE 230
Query: 195 NTISLGVGMKF 205
N + +G KF
Sbjct: 231 NQVQVGFSYKF 241
>gi|229620416|gb|ACQ84164.1| Omp31 [Brucella melitensis]
Length = 240
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 82/248 (33%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G D + +
Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAGTDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E ++ + + EY + K +T+
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232
Query: 198 SLGVGMKF 205
+G+ KF
Sbjct: 233 RVGLNYKF 240
>gi|265984654|ref|ZP_06097389.1| outer membrane protein 31b [Brucella sp. 83/13]
gi|264663246|gb|EEZ33507.1| outer membrane protein 31b [Brucella sp. 83/13]
Length = 261
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 84/268 (31%), Gaps = 78/268 (29%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++S+A+ SA AAD + + G Y G++A
Sbjct: 7 TVMKTALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINA 54
Query: 63 LYNGSFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
Y G + G + AGYN + + I+ G E D + +
Sbjct: 55 GYAGGKFKHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGS 114
Query: 103 VPVL---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
+ + + G++R R G+ ++ L++Y T G
Sbjct: 115 TVKSKLVDNGDLSDVGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLA 174
Query: 142 VAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ + A + + G T G GVE ++ + + EY + K
Sbjct: 175 YGKVKTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFN 233
Query: 194 Y----------------NTISLGVGMKF 205
Y +T+ +G+ KF
Sbjct: 234 YIDEENVNVNMENKVNFHTVRIGLNYKF 261
>gi|261218682|ref|ZP_05932963.1| outer membrane protein 25b [Brucella ceti M13/05/1]
gi|261321820|ref|ZP_05961017.1| outer membrane protein 25b [Brucella ceti M644/93/1]
gi|260923771|gb|EEX90339.1| outer membrane protein 25b [Brucella ceti M13/05/1]
gi|261294510|gb|EEX98006.1| outer membrane protein 25b [Brucella ceti M644/93/1]
Length = 229
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 37/167 (22%)
Query: 74 HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLR 121
G ++AGYN + + GV+GD+ Y + + S G++R
Sbjct: 65 DGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVR 124
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLS 173
R G + D + Y G + G AG GV+ +
Sbjct: 125 ARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-T 182
Query: 174 ESLVARLEYRASKYSKVE---------------GFYNTISLGVGMKF 205
++++ RLEYR + Y + + I LGV KF
Sbjct: 183 DNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF 229
>gi|332717300|ref|YP_004444766.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
gi|325063985|gb|ADY67675.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
Length = 219
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 31/184 (16%)
Query: 51 HDFNGPYAGLSALYNGSFGEEA-----------HHNAGGSIFAGYNVEDSC-IMYGVEGD 98
+ G AG+ A Y + + + A F G+N + + G+E D
Sbjct: 38 FSWTGFTAGVQAGYGWNNNDASIVGLPGQTSADFDGALAGGFVGFNYDLGNSWVVGLEAD 97
Query: 99 VRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAG 152
+L GS+R R GY D L+Y T G A+ Y E
Sbjct: 98 FEKNWGDDSATILGTGFDYGFDWQGSVRGRVGYAF-DRALVYGTAGWAYARGYAEVPGIA 156
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGV 201
++ G T GVG++ ++ + R+EYR + + + + I +G+
Sbjct: 157 DVKETFNGYTVGVGLDY-AFTDMVFGRVEYRYTDFGDKDFDFGGAAINADVDQHAIRVGL 215
Query: 202 GMKF 205
G+KF
Sbjct: 216 GVKF 219
>gi|23502485|ref|NP_698612.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|163843871|ref|YP_001628275.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225628052|ref|ZP_03786088.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256370036|ref|YP_003107547.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260169279|ref|ZP_05756090.1| outer membrane protein Omp31 [Brucella sp. F5/99]
gi|260565895|ref|ZP_05836365.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|261219740|ref|ZP_05934021.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261222753|ref|ZP_05937034.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|261315779|ref|ZP_05954976.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261318224|ref|ZP_05957421.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261322630|ref|ZP_05961827.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261325677|ref|ZP_05964874.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261752901|ref|ZP_05996610.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261755562|ref|ZP_05999271.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|261758791|ref|ZP_06002500.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|265989255|ref|ZP_06101812.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|265998716|ref|ZP_06111273.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|294852932|ref|ZP_06793605.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|23348478|gb|AAN30527.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251200|gb|AAS84571.1| Omp31b [Brucella neotomae]
gi|46251202|gb|AAS84572.1| Omp31b [Brucella pinnipedialis]
gi|46251204|gb|AAS84573.1| Omp31b [Brucella ceti]
gi|46251206|gb|AAS84574.1| Omp31b [Brucella ceti]
gi|46251208|gb|AAS84575.1| Omp31b [Brucella ceti]
gi|157310319|emb|CAN43873.1| outer membrane protein 31b [Brucella microti CCM 4915]
gi|157310321|emb|CAN43874.1| outer membrane protein 31b [Brucella microti]
gi|163674594|gb|ABY38705.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225617215|gb|EEH14261.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256000199|gb|ACU48598.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260155413|gb|EEW90493.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|260921337|gb|EEX87990.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|260924829|gb|EEX91397.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261295320|gb|EEX98816.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261297447|gb|EEY00944.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261301657|gb|EEY05154.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261304805|gb|EEY08302.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261738775|gb|EEY26771.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|261742654|gb|EEY30580.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261745315|gb|EEY33241.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|262553340|gb|EEZ09174.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|264661452|gb|EEZ31713.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|294821521|gb|EFG38520.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 261
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 84/268 (31%), Gaps = 78/268 (29%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++S+A+ SA AAD + + G Y G++A
Sbjct: 7 TVMKTALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINA 54
Query: 63 LYNGSFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
Y G + G + AGYN + + ++ G E D + +
Sbjct: 55 GYAGGKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGS 114
Query: 103 VPVL---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
+ + + G++R R G+ ++ L++Y T G
Sbjct: 115 TVKSKLVDNGDLSDIGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLA 174
Query: 142 VAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ + A + + G T G GVE ++ + + EY + K
Sbjct: 175 YGKVKTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFN 233
Query: 194 Y----------------NTISLGVGMKF 205
Y +T+ LG+ KF
Sbjct: 234 YIDEENVNINMENKVNFHTVRLGLNYKF 261
>gi|62290498|ref|YP_222291.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82700421|ref|YP_414995.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|237816005|ref|ZP_04595002.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260547029|ref|ZP_05822768.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755331|ref|ZP_05867679.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260758554|ref|ZP_05870902.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260762376|ref|ZP_05874719.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260884349|ref|ZP_05895963.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|261214598|ref|ZP_05928879.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297248879|ref|ZP_06932597.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|46251194|gb|AAS84568.1| Omp31b [Brucella abortus]
gi|62196630|gb|AAX74930.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82616522|emb|CAJ11595.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|237789303|gb|EEP63514.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260096079|gb|EEW79956.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668872|gb|EEX55812.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260672808|gb|EEX59629.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260675439|gb|EEX62260.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260873877|gb|EEX80946.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|260916205|gb|EEX83066.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297176048|gb|EFH35395.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 261
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 83/268 (30%), Gaps = 78/268 (29%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++S+A+ SA AAD + + G Y G++A
Sbjct: 7 TVMKTALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINA 54
Query: 63 LYNGSFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDV--- 99
Y G + G + AGYN + + ++ G E D
Sbjct: 55 GYAGGKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGS 114
Query: 100 ---------------RYTVPVLADN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
+ D + + G++R R G+ ++ L++Y T G
Sbjct: 115 TVKSKLVDNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLA 174
Query: 142 VAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ + A + + G T G GVE ++ + + EY + K
Sbjct: 175 YGKVKTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFN 233
Query: 194 Y----------------NTISLGVGMKF 205
Y +T+ LG+ KF
Sbjct: 234 YIDEENVNINMENKVNFHTVRLGLNYKF 261
>gi|254719645|ref|ZP_05181456.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|306837721|ref|ZP_07470589.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|306407177|gb|EFM63388.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 253
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 78/264 (29%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++S+A+ SA AAD + + G Y G++A Y G
Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106
+ G + AGYN + + I+ G E D + +
Sbjct: 51 GKFKHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKS 110
Query: 107 ---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ + + G++R R G+ ++ L++Y T G +
Sbjct: 111 KLVDNGDLSDVGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170
Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194
+ A + + G T G GVE ++ + + EY + K Y
Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229
Query: 195 -------------NTISLGVGMKF 205
+T+ +G+ KF
Sbjct: 230 ENVNVNMENKVNFHTVRIGLNYKF 253
>gi|326410582|gb|ADZ67646.1| outer membrane protein Omp31 [Brucella melitensis M28]
Length = 229
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 76/238 (31%), Gaps = 59/238 (24%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------- 69
SA AAD V PT A + G Y G++A Y G
Sbjct: 2 FATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAGGKFKHPFSSF 52
Query: 70 ------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLA 107
+ G + AGYN + D+ ++ G E D + + L
Sbjct: 53 DKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLE 112
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAI 159
+ G++R R GY ++ L++Y T G + G+
Sbjct: 113 GKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKA 172
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205
G T G G E ++ + + EY + K +T+ +G+ KF
Sbjct: 173 GWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 229
>gi|158425351|ref|YP_001526643.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332240|dbj|BAF89725.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 233
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 71/208 (34%), Gaps = 43/208 (20%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGS------------FGEEAHHNAGGSIFAGYNV 86
P A V + G Y G +A Y G GYN
Sbjct: 28 PVKAPVAPVAPVFSWTGFYIGANAGYGGDKYNYDFGVPTTATASTNSSGFFAGGQIGYNY 87
Query: 87 ED-SCIMYGVEGDVRYTV---------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYA 136
+ + ++ G+E D++++ P + NI S G++R R GY D L Y
Sbjct: 88 QFANNVVLGLETDLQWSGIDGTLNTVTPGASTNIKSSLDYFGTVRARVGYAF-DRFLPYI 146
Query: 137 TVGPDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
T G + G + + +G T G GVE ++ + + EY+
Sbjct: 147 TGGMAYGKTKTEGSQFSRTGFTTFDDSDTKVGWTIGGGVEY-AITNNWTFKTEYQYVDLG 205
Query: 189 K-----------VEGFYNTISLGVGMKF 205
V+ ++T+ GV KF
Sbjct: 206 NSDYGIGTNAVSVDNKFHTVRAGVNYKF 233
>gi|13471933|ref|NP_103500.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022677|dbj|BAB49286.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 220
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 40/216 (18%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ LA+ S LA+ AAD V P A + G Y G+ A
Sbjct: 1 MKLALLCSVAFLAAASPVLAADIVE----------PVAAMP------FSWTGFYGGVQAG 44
Query: 64 -------YNGSFGEEAHHNAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPV-------- 105
++G+ + + N G IF G YN + + + G+EGD+ +
Sbjct: 45 GGWNDSRWSGATFDSFNTNGSGGIFGGQIGYNYQINQFVIGIEGDLAGSTVKGDGQCSTA 104
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI----AIGG 161
L + GS+R R GY + D +L+Y G + G +G
Sbjct: 105 LGTTCETKQDYLGSVRGRLGYAI-DRILIYGDAGVAFTKYKIAEVDGFHQSFGGGSRVGW 163
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197
TAG+G E L++ A +E+ + G +TI
Sbjct: 164 TAGLGAEY-ALTDHWTAGVEWNYYDFGTKSGESDTI 198
>gi|254702337|ref|ZP_05164165.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704867|ref|ZP_05166695.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|254708278|ref|ZP_05170106.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|254710652|ref|ZP_05172463.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|254714835|ref|ZP_05176646.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|254717892|ref|ZP_05179703.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|256032146|ref|ZP_05445760.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256061667|ref|ZP_05451806.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|256160342|ref|ZP_05458035.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|256255546|ref|ZP_05461082.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
Length = 253
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 78/264 (29%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++S+A+ SA AAD + + G Y G++A Y G
Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106
+ G + AGYN + + ++ G E D + +
Sbjct: 51 GKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKS 110
Query: 107 ---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ + + G++R R G+ ++ L++Y T G +
Sbjct: 111 KLVDNGDLSDIGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170
Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194
+ A + + G T G GVE ++ + + EY + K Y
Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229
Query: 195 -------------NTISLGVGMKF 205
+T+ LG+ KF
Sbjct: 230 ENVNINMENKVNFHTVRLGLNYKF 253
>gi|319957414|ref|YP_004168677.1| porin [Nitratifractor salsuginis DSM 16511]
gi|319419818|gb|ADV46928.1| porin [Nitratifractor salsuginis DSM 16511]
Length = 220
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 53/239 (22%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ ++ +++AL+SF A G +VP ++G Y GL
Sbjct: 1 MRRVIFSL-TTAVALSSFAMA------------GGDIVPVAPAPAD-----SWSGFYVGL 42
Query: 61 SALYNGSFGEE-----------AHHNAGGSIFAGYNVE-DSCIMYGVE--------GDVR 100
A + GG ++AGYN ++ + G+E D
Sbjct: 43 QAGGIWGNADVNIPAYPSNFSLDPDGFGGGVYAGYNWLLENDFLIGLEVAGNFISADDEG 102
Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITP 156
+ + + ++ +R G + D+ + Y T G + + G G
Sbjct: 103 LSGGMGGEKYKVEQNWDAAILLRIGKVIDDTWMPYVTGGVAWTELETSYIPDGGWGSKKD 162
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKY----------SKVEGFYNTISLGVGMKF 205
G T G GVE L+ ++ AR+EYR + Y S V+ N + +G+ +F
Sbjct: 163 TVNGWTIGAGVE-MKLTTNIHARIEYRYTDYDTAQFVHAGPSNVDYNDNRVMVGISYRF 220
>gi|260466903|ref|ZP_05813086.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259029299|gb|EEW30592.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 234
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/252 (21%), Positives = 81/252 (32%), Gaps = 68/252 (26%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + + L A AAD + G +D++G YAG+ A
Sbjct: 1 MKTLLLATVFILGPVGMACAADINEVSPVAG----------------YDWSGLYAGVDAG 44
Query: 64 YNGSFGEE-----------------AHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPV 105
Y G I G N + + + G E D+ Y+
Sbjct: 45 YAAGKSNLFIAGGGFGGGSDLNVPLDPDGFVGGIHIGTNYQMANNFVIGAEADIAYSNAD 104
Query: 106 LADNIHSLHG-----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GK 150
+ + G GS R+R GY D L Y T G A+ T G
Sbjct: 105 GLTPVDTGGGGVTTLLKSELKWQGSARLRAGYAF-DRTLPYITAGVAAAKYEVTAISAGP 163
Query: 151 AGE---ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS--------------KVEGF 193
GE +G T G G+E ++ +AR EYR S + V+
Sbjct: 164 GGEIPFHDESHVGWTVGAGIE-HAFTDRWIARAEYRYSDFGSQDLSLAAGLPTVTSVDLQ 222
Query: 194 YNTISLGVGMKF 205
+ + +G+ KF
Sbjct: 223 THDVRVGLSYKF 234
>gi|240850131|ref|YP_002971524.1| hemin binding protein D [Bartonella grahamii as4aup]
gi|240267254|gb|ACS50842.1| hemin binding protein D [Bartonella grahamii as4aup]
Length = 272
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 83/279 (29%), Gaps = 92/279 (32%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--- 63
V S +L S QAAD V P + G Y G
Sbjct: 6 LVSTSIFSLISISVVQAADMV----------TPEQPVPVIAAPAFSWTGFYLGGQIGSFS 55
Query: 64 --------------YNGSFGEEAHHNAG--GSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106
+N E+ +G G ++AG N++ + G++ D+ ++
Sbjct: 56 GKTTASYLKDETGIWNPIGKEDLPKLSGFIGGVYAGSNIDIDNGFIIGIDTDIMWSDKKG 115
Query: 107 ADNIHS------------------------------------LHGIGGSLRIRGGYEVSD 130
+I+ G+ R++ G+ +
Sbjct: 116 TKDINRPKKSQTEEASSEETNLTRDSHEEDSTIPIEAVRHTLKQKWAGATRVKVGFAIE- 174
Query: 131 SLLLYATVGPDVAQKYETGKAG---------------EITPIAIGGTAGVGVEVGGLSES 175
++ Y + G Q + IG T G GV+ ++++
Sbjct: 175 RVMPYVSGGIAYTQLQNIFGLVADSNNRAVNFSDWLHDEKKTMIGYTLGGGVDF-AMTDN 233
Query: 176 LVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205
++ R EYR S + K + + N +GV KF
Sbjct: 234 VIVRAEYRYSDFGKKKFVHDKFEMGYKTNDFRVGVAYKF 272
>gi|110634908|ref|YP_675116.1| hypothetical protein Meso_2567 [Mesorhizobium sp. BNC1]
gi|110285892|gb|ABG63951.1| outer membrane protein, hypothetical [Chelativorans sp. BNC1]
Length = 234
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 44/240 (18%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + ++ + L + AAD + + +D++G Y G+
Sbjct: 1 MRSILSLAFIGLFGTSAGFAADAIIQRDDPVPVAP----VVAAPAKSYDWSGIYLGVDGG 56
Query: 64 YNGS----------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
Y + ++ G ++ GYN + + G EGD +
Sbjct: 57 YKWNSLKFDPNSVAKKAGIKGDAFKMNSTFGGVYLGYNYQIDNWVIGAEGDAQLYFGGKD 116
Query: 108 DNIHSLHGI------GGSLRIRGGYEVSDSLLLYATVGPD-----VAQKYETGKAGEITP 156
S +G GS R+R GY + D L Y T G ++ K +
Sbjct: 117 KAAASGNGRFAASRGFGSARVRLGYAM-DRFLPYVTGGAAFENLEISSKKDGKVVARDNK 175
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
+G T G G++ ++E + ++EY+ + K +T+ +G+ KF
Sbjct: 176 TRVGYTLGAGLDY-AITEKWIGKVEYQFMDFGKKSYDLDIGSADLSSHSHTMRVGLSYKF 234
>gi|306843011|ref|ZP_07475638.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306844622|ref|ZP_07477209.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275066|gb|EFM56829.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306286803|gb|EFM58344.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 253
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 78/264 (29%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++S+A+ SA AAD + + G Y G++A Y G
Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106
+ G + AGYN + + I+ G E D + +
Sbjct: 51 GKFKHPFSGVEQDGGEDFSGSLDVTGSGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKS 110
Query: 107 ---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ + + G++R R G+ ++ L++Y T G +
Sbjct: 111 KLVDKGDLSDIGVAGNLDGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170
Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194
+ A + + G T G GVE ++ + + EY + K Y
Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229
Query: 195 -------------NTISLGVGMKF 205
+T+ +G+ KF
Sbjct: 230 ENVNVNMENKVNFHTVRIGLNYKF 253
>gi|189024724|ref|YP_001935492.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|254689800|ref|ZP_05153054.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 6 str. 870]
gi|254694291|ref|ZP_05156119.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 3 str. Tulya]
gi|254697943|ref|ZP_05159771.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 2 str. 86/8/59]
gi|254730834|ref|ZP_05189412.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 4 str. 292]
gi|256258053|ref|ZP_05463589.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 9 str. C68]
gi|189020296|gb|ACD73018.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
Length = 253
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 82/264 (31%), Gaps = 78/264 (29%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++S+A+ SA AAD + + G Y G++A Y G
Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDV------- 99
+ G + AGYN + + ++ G E D
Sbjct: 51 GKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKS 110
Query: 100 -----------RYTVPVLADN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ D + + G++R R G+ ++ L++Y T G +
Sbjct: 111 KLVDNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170
Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194
+ A + + G T G GVE ++ + + EY + K Y
Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229
Query: 195 -------------NTISLGVGMKF 205
+T+ LG+ KF
Sbjct: 230 ENVNINMENKVNFHTVRLGLNYKF 253
>gi|302319025|gb|ADL14702.1| outer membrane protein 31 [Brucella melitensis]
Length = 240
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 80/248 (32%), Gaps = 59/248 (23%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+V ++S+A SA AAD V PT+A + G Y G++A Y G
Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTVAPVD----TFSWTGGYIGINAGYAG 53
Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102
+ G + AGYN + D+ ++ G E D + +
Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113
Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154
L + G++R R GY ++ L++Y T G + G+
Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173
Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197
G T G G E + + + EY K +T
Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AFNNNWTLKSEYLYPYLGKRNLVDVDNSFLESKVNFHTD 232
Query: 198 SLGVGMKF 205
G+ KF
Sbjct: 233 RFGLNYKF 240
>gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2]
gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2]
Length = 255
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 77/223 (34%), Gaps = 43/223 (19%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
L + S A+A +A AAD RA I + G Y G
Sbjct: 1 MLRRVLLASVGAIALAGTALAADLPSRAPPPVYVPPAPI---------FTWTGVYIGGQI 51
Query: 63 LYNGSFGE--------------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT------ 102
Y G + + G GYN++ + + G+EG V T
Sbjct: 52 GYAWGNGSANFGDANGNFVNFGNSGNGVIGGAHVGYNLQLNQFVVGLEGSVDGTSLSKTY 111
Query: 103 --------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA--- 151
V N+H+ I GS+R R GY D +L+YAT G A +
Sbjct: 112 SGTAFVPGFGVAGINLHTSADIQGSIRGRVGYAW-DRVLVYATGGVAFAGVKASLSTPFS 170
Query: 152 -GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ +G T G G+E ++ + R EYR S + +
Sbjct: 171 YDSSSTTKVGWTVGGGLEY-AVTNNWSIRAEYRYSNFGNATLY 212
>gi|306840766|ref|ZP_07473513.1| outer membrane protein Omp31 [Brucella sp. BO2]
gi|306289161|gb|EFM60410.1| outer membrane protein Omp31 [Brucella sp. BO2]
Length = 223
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 74/233 (31%), Gaps = 59/233 (25%)
Query: 22 QAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------------ 69
AAD V P+ T V + G Y G++A Y G
Sbjct: 1 MAADVVVSE--------PSAPTTAPVDT-FSWTGGYIGINAGYAGGKFKHPFSAFDTDDN 51
Query: 70 -------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHS 112
G + AGYN + D+ ++ G E D + + L +
Sbjct: 52 ERVSGSLNITSGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISADAGGLEGKAET 111
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAG 164
G++R R GY ++ L++Y T G + G+ G T G
Sbjct: 112 KVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDVSALHTWSDKTKAGWTLG 171
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205
G E ++ + + EY + K +T+ +G+ KF
Sbjct: 172 AGAEY-AINNNWTLKSEYLYTDLGKRNLIDVDDSFLESKVNFHTVRVGLNYKF 223
>gi|319403668|emb|CBI77253.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498]
Length = 262
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 88/268 (32%), Gaps = 74/268 (27%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S QAAD ++ VP I+++ + G Y G
Sbjct: 3 IKHLLVACSWTFIPVSMVQAADIMKPHQSQSYQPVPVISSSN----NFSWTGFYVGAQIG 58
Query: 64 YNGSFGEEAHH------------------------NAGGSIFAGYNVE-DSCIMYGVEGD 98
G GE G I+AG N ++ G++ D
Sbjct: 59 --GFSGEATLSPIQDSVEEDREGQGFSEIKSPKLSGFIGGIYAGSNFSLSKDLILGIDTD 116
Query: 99 VRYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--- 146
+ ++ ++ G++R+R G+ + D ++ Y + G Q
Sbjct: 117 MVWSGKKNTKVFDVQDMSIDMSIKEKWAGAMRMRVGFAM-DRVMPYVSGGVSYVQLQNVF 175
Query: 147 --------------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
K + T I +G + G GV+V ++++++ R EYR S
Sbjct: 176 TAKRLAKAVVRERRNTLPSDSEPKFLDETKILVGYSVGGGVDV-AMTDNVIMRAEYRYSD 234
Query: 187 YSKVEGFYNTI---------SLGVGMKF 205
+ K + + + +GV KF
Sbjct: 235 FGKKKFAKDNVDLSYKTNDFRVGVAYKF 262
>gi|91975762|ref|YP_568421.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91682218|gb|ABE38520.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 207
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 50 RHDFNGPYAGLSALYNGSFGEEAHH-----NAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104
+ GPY G + Y+ FG + G + GYN + I++G+EGD++++
Sbjct: 41 AFSWAGPYLGGNLGYS--FGNVTNSITKPSGFNGGVQGGYNWQSGNIVFGLEGDIQFS-- 96
Query: 105 VLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
AD+ + + G+ R R GY ++D LL+YAT G Q + + G
Sbjct: 97 -TADDTFAPYKFSNPWFGTARGRVGYAMND-LLIYATGGFAFGQLKGERLLSTESHSSAG 154
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSK 189
T G G E + L A++EY S
Sbjct: 155 WTVGAGAEF-AFAPKLSAKVEYLYGSLST 182
>gi|13470965|ref|NP_102534.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021708|dbj|BAB48320.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 226
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 65/206 (31%), Gaps = 44/206 (21%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEA----------------HHNAGGSIFAGYN 85
A + HD++G Y G Y + G + GYN
Sbjct: 23 AISAEPATAHDWSGVYVGGQIGYGFGKTDATYNLPNTPTIRGSQDYDTDGFLGGVQIGYN 82
Query: 86 VEDSCIMYGVEGDVRYTVPV---------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYA 136
+ + + GVE DV L D + G+LR R GY D L+Y
Sbjct: 83 YQINSAVLGVEADVSGADIKGHSDEITSGLGDRYDTKVDWFGTLRARAGYAF-DRTLIYG 141
Query: 137 TVGPDVAQKYETGKAG-----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV- 190
T G G +G T G G+E +++ A+ EY+
Sbjct: 142 TGGLAFGSVENRYVDGPFDTFSEKNTKVGWTIGAGLE-QAITDHWSAKFEYQYVDLRDQT 200
Query: 191 -----------EGFYNTISLGVGMKF 205
+ +N + +G+ KF
Sbjct: 201 IDYAPNSNTTFDNTFNAVKIGMNYKF 226
>gi|319408049|emb|CBI81703.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 274
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 87/281 (30%), Gaps = 88/281 (31%)
Query: 4 LFLAVGVSSLALASFCSAQAAD-PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + S AL S +AQAAD PV+ T+ V + G Y G
Sbjct: 3 MKCVITASIFALVSASAAQAADMPVQERPT-------TVLPQVVVAPAFSWTGFYLGGQI 55
Query: 63 L-------YNGSFGEEAH-----------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV 103
+ + G+ G ++AG NV+ + GV+ D+ ++
Sbjct: 56 GGFSSNSSWVRTSGDIQGILGHNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWSG 115
Query: 104 PVL---------------------------------------ADNIHSLHGIGGSLRIRG 124
+++ G+ R+R
Sbjct: 116 AKAKASRSSLRTGNGARLAARAGVSTRAPALFEGTDNNASRVTESVTFSDKWSGATRVRL 175
Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAG-----------EITPIAIGGTAGVGVEVGGLS 173
G+ D ++ Y G +Q + +G T G GV+ ++
Sbjct: 176 GFAF-DRIMPYVAGGIAYSQIKAVVAEERQGVETVIEQLSGSKTLVGYTLGAGVDF-AMT 233
Query: 174 ESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
+S++ R EYR S + K + N +GV KF
Sbjct: 234 DSVILRAEYRYSDFGKKSFISNNAEIDLKTNDFRVGVAYKF 274
>gi|222082486|ref|YP_002541851.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221727165|gb|ACM30254.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 230
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 74/239 (30%), Gaps = 50/239 (20%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA-- 62
L A +A AD P A + G Y GL+
Sbjct: 4 VLGSAAFLFAFGMASAAYTADL--------SVSTPPAAPMEQ--PVFTWTGFYVGLNGGG 53
Query: 63 --------------LYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV---RYTVP 104
+ G FG+ G GYN + D + G+E D
Sbjct: 54 AFGGDDKFGLHSGDTFLGKFGKIEGSGFFGGGQIGYNYQVDPNWVIGLEADFQGANIHDS 113
Query: 105 VLADNIH--SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITPI 157
V D H S G+LR R GY D+ L Y T G G
Sbjct: 114 VTNDGAHGSSKINWFGTLRPRVGYAY-DNTLFYGTGGLAYGHIDYKGSLDGVGSFSEDKT 172
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205
G G GVE ++++ A+LEY+ + K +++I +GV KF
Sbjct: 173 KAGWVLGAGVE-HAFTDNVTAKLEYQYVDFGSFTAGGDALSSKATADFHSIRVGVNYKF 230
>gi|240849915|ref|YP_002971304.1| hemin binding protein C [Bartonella grahamii as4aup]
gi|240267038|gb|ACS50626.1| hemin binding protein C [Bartonella grahamii as4aup]
Length = 277
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 88/289 (30%), Gaps = 98/289 (33%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L A S+ A S +AQAAD + PT V + G Y G
Sbjct: 3 MKWLITA---SAFAFVSVSAAQAADVI-------VPPSPTPVAPVIVAPTFSWTGFYLGG 52
Query: 61 SALYNGSFGEEAHH-------------------NAGGSIFAGYNVEDSC-IMYGVEGDVR 100
G G+ G ++AG NV+ ++ GV+ D+
Sbjct: 53 QLG--GFSGKTKMDILSNGKKIPAPDDLLPKLSGFMGGLYAGSNVDLGNGLILGVDTDIM 110
Query: 101 YT--VPVLADNIHS-------------------------------------LHGIGGSLR 121
++ N + G+ R
Sbjct: 111 WSNKDDTKTGNTYVILPDHINYIKKILTESGINIGKDALEAGAKRTHSFTFKEKWAGATR 170
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGV 165
+R G+ ++ ++ Y G Q + +G + T +G T G
Sbjct: 171 VRIGFA-AERIMPYVAGGIAYTQLQDTASISITGKDSDKVIASGTLSDETKTLVGYTLGA 229
Query: 166 GVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
GV+ ++ +++ R EYR S + K N +GV KF
Sbjct: 230 GVD-LAMTNNVIVRAEYRYSDFGKKKFSNDKYETSYKTNDFRVGVAYKF 277
>gi|17989189|ref|NP_541822.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|17985044|gb|AAL54086.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 219
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 71/216 (32%), Gaps = 51/216 (23%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------------------EEAHHNAGGS 79
P+ T V + G Y G++A Y G + G
Sbjct: 6 PSAPTAAPVDT-FSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGG 64
Query: 80 IFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHSLHGIGGSLRIRGGYEVS 129
+ AGYN + D+ ++ G E D + + L + G++R R GY +
Sbjct: 65 VQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTAT 124
Query: 130 DSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLE 181
+ L++Y T G + G+ G T G G E ++ + + E
Sbjct: 125 ERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKAGWTLGAGAEY-AINNNWTLKSE 183
Query: 182 YRASKYSKVEGFY------------NTISLGVGMKF 205
Y + K +T+ +G+ KF
Sbjct: 184 YLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 219
>gi|260545348|ref|ZP_05821089.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC
8038]
gi|260754712|ref|ZP_05867060.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 6 str. 870]
gi|260757935|ref|ZP_05870283.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 4 str. 292]
gi|260761758|ref|ZP_05874101.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 2 str. 86/8/59]
gi|260883735|ref|ZP_05895349.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 9 str. C68]
gi|260096755|gb|EEW80630.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC
8038]
gi|260668253|gb|EEX55193.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 4 str. 292]
gi|260672190|gb|EEX59011.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 2 str. 86/8/59]
gi|260674820|gb|EEX61641.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 6 str. 870]
gi|260873263|gb|EEX80332.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 9 str. C68]
Length = 173
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 37/167 (22%)
Query: 74 HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLR 121
G ++AGYN + + GV+GD+ Y + + S G++R
Sbjct: 9 DGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVR 68
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLS 173
R G + D + Y G + G AG GV+ +
Sbjct: 69 ARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-T 126
Query: 174 ESLVARLEYRASKYSKVE---------------GFYNTISLGVGMKF 205
++++ RLEYR + Y + + I LGV KF
Sbjct: 127 DNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF 173
>gi|294853764|ref|ZP_06794436.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294819419|gb|EFG36419.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|326553873|gb|ADZ88512.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 223
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 74/233 (31%), Gaps = 59/233 (25%)
Query: 22 QAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------------ 69
AAD V PT A + G Y G++A Y G
Sbjct: 1 MAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAGGKFKHPFSSFDKEDN 51
Query: 70 -------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHS 112
+ G + AGYN + D+ ++ G E D + + L +
Sbjct: 52 EQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAET 111
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAG 164
G++R R GY ++ L++Y T G + G+ G T G
Sbjct: 112 KVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKAGWTLG 171
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205
G E ++ + + EY + K +T+ +G+ KF
Sbjct: 172 AGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 223
>gi|289467881|gb|ADC95625.1| 31kDa outer membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. M5]
Length = 219
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 71/216 (32%), Gaps = 51/216 (23%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------------------EEAHHNAGGS 79
P+ T V + G Y G++A Y G + G
Sbjct: 6 PSAPTAAPVDT-FSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGG 64
Query: 80 IFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHSLHGIGGSLRIRGGYEVS 129
+ AGYN + D+ ++ G E D + + L + G++R R GY +
Sbjct: 65 VQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTAT 124
Query: 130 DSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLE 181
+ L++Y T G + G+ G T G G E ++ + + E
Sbjct: 125 ERLMVYGTGGLAYGKVKSAFNLGDDAGALHTWSDKTKAGWTLGAGAEY-AINNNWTLKSE 183
Query: 182 YRASKYSKVEGFY------------NTISLGVGMKF 205
Y + K +T+ +G+ KF
Sbjct: 184 YLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 219
>gi|319782584|ref|YP_004142060.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317168472|gb|ADV12010.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 242
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 83/255 (32%), Gaps = 70/255 (27%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + + +++ LA A AAD + +D++G YAG+
Sbjct: 6 TMKILLLATAIILAPAGMACAADIAETSPT----------------SAYDWSGLYAGVDI 49
Query: 63 LYN----------GSFGEEAHHNAG-------GSIFAGYNVE-DSCIMYGVEGDVRY--- 101
Y G G N G G + G N + ++ + G E D+ Y
Sbjct: 50 GYAAGKSNLFIAGGGLGGATDLNVGVDPNGFIGGVHIGANYQMENSFVIGAEADIAYGNI 109
Query: 102 ---------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ---KYETG 149
+ + S GS R+R GY D L Y T G A+ +
Sbjct: 110 DGLTALDAGGGGGVTTLLKSELKWSGSARLRAGYAF-DRTLPYITAGVAAAKYELIAVSA 168
Query: 150 KAGEITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSK--------------V 190
+G T G G+E ++ +AR EYR S + V
Sbjct: 169 GGPAAEVTLHSDSHVGWTVGAGIE-HAFTDRWIARAEYRYSDFGSQDLSVAAGLPTETHV 227
Query: 191 EGFYNTISLGVGMKF 205
+ I +G+ KF
Sbjct: 228 DLQTQDIRVGLSYKF 242
>gi|254696546|ref|ZP_05158374.1| outer membrane protein, putative [Brucella abortus bv. 2 str.
86/8/59]
gi|254705298|ref|ZP_05167126.1| outer membrane protein, putative [Brucella suis bv. 3 str. 686]
gi|260760923|ref|ZP_05873266.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|261756008|ref|ZP_05999717.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|260671355|gb|EEX58176.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|261745761|gb|EEY33687.1| outer membrane protein [Brucella suis bv. 3 str. 686]
Length = 158
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 29/159 (18%)
Query: 74 HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI-----------HSLHGIGGSLR 121
+ G ++ GYN + + G++ +V Y + + + G++R
Sbjct: 2 NGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVR 61
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
R GY + D + Y G + G+ + G T G G++ +++++
Sbjct: 62 ARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKSKTQTGWTVGAGIDYAA-TDNVL 119
Query: 178 ARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
RLEYR + Y K N I LGV KF
Sbjct: 120 LRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYKF 158
>gi|182679250|ref|YP_001833396.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635133|gb|ACB95907.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
Length = 250
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 64/200 (32%), Gaps = 47/200 (23%)
Query: 51 HDFNGPYAGLSALYNGS----------------FGEEAHHNAGGSIFAGYNVE------- 87
+ G Y G Y FG + G GYN +
Sbjct: 40 FTWTGVYVGGDIGYAWGNTSYNSQIFSAPARFAFGSYSPDGVTGGAHVGYNFQAGPSFIG 99
Query: 88 DSCIMYGVEGDV---RYTVPVLADNIH---SLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
+ G+EGDV Y+ V+ S I GS+R R G D L+YAT G
Sbjct: 100 TGNFVIGIEGDVQGSNYSKSVVGFANDIYTSKLDITGSIRGRLGIAF-DRALIYATGGAA 158
Query: 142 VAQKYE-----TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF--- 193
G A+G T G G+E ++ + R +Y S Y F
Sbjct: 159 FGGITNQLQLRNGAFFSNDRTAVGWTVGGGIEY-AVTNNWSVRAQYLYSDYGHTNSFFPN 217
Query: 194 --------YNTISLGVGMKF 205
N +++G KF
Sbjct: 218 AQVHKHDTQNKVTVGFSYKF 237
>gi|254504423|ref|ZP_05116574.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
gi|222440494|gb|EEE47173.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
Length = 221
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 78/220 (35%), Gaps = 29/220 (13%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH-DFNGPYAGLSALYN------ 65
LALA F +A A + D+ G Y G +
Sbjct: 4 LALAGFALTASAAGALAADLPQSPAPAPAYDAVPAGQQSIDWTGFYVGTQLGWAFGNFDN 63
Query: 66 ---GSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH-----SLHGI 116
G+ +++ GG +AGYN + ++ G+E D T + ++ S
Sbjct: 64 STGGASSSFSNNGVGGGAYAGYNFQVTPNVVVGLESDFSLTDLEKSGTVNGLSLKSSSDW 123
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
+ R R GY D ++Y G +A T + A+G T G G E +++++
Sbjct: 124 NANFRGRLGYAF-DRYMIYGAGGLAIADLEATANGVSDSKTALGWTLGAGAEA-AITQNV 181
Query: 177 VARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205
VAR +Y + + + + G+ KF
Sbjct: 182 VARFDYSYQDFGDQDFNLGGTGVSTEFNDHQVRAGIAYKF 221
>gi|319408047|emb|CBI81701.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 289
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 87/296 (29%), Gaps = 103/296 (34%)
Query: 4 LFLAVGVSSLALASFCSAQAAD-PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + S AL S +AQAAD PV+ T+ V + G Y G
Sbjct: 3 MKCVITASIFALVSASAAQAADMPVQERPT-------TVLPQVVVAPAFSWTGFYLGGQI 55
Query: 63 L-----------YNGSFGEEAH-----------HNAGGSIFAGYNVEDSC-IMYGVEGDV 99
Y G + G ++AG NV+ + GV+ D+
Sbjct: 56 GGFSSNSSSKRIYQGVSKGKEDILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDI 115
Query: 100 RYTVPVL-----------------------------------------ADNIHSLHGIGG 118
++ N+ G
Sbjct: 116 VWSGDKAKTSKSYDLPQTSDVQEVATRAEVSTGVPTLVEGADNNASRVTRNVTFSDKWSG 175
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK--------------------AGEITPIA 158
+ R+R G D ++ Y G +Q + + +
Sbjct: 176 ATRVRLGAAF-DRIMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEGLSDSKTM 234
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205
+G T G GV+ ++++++ R EYR S + K V+ N +GV KF
Sbjct: 235 VGYTLGAGVDF-AMTDTVMLRAEYRYSDFGKKTFVKDKVEVDLKTNDFRVGVAYKF 289
>gi|296448558|ref|ZP_06890432.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
gi|296253924|gb|EFH01077.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
Length = 482
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 68/204 (33%), Gaps = 35/204 (17%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
+ A+ A A + + + P R+D+ G Y G +
Sbjct: 254 AKFPSAAGAPAFLASALPSSDLPSKKGPPG--------SRYDWRGVYVGFDVGHAWGHDR 305
Query: 71 EAHH---------------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA------DN 109
+ G + AGYN + + ++ GVE + T
Sbjct: 306 FVPYYSVPNVGAPQSFDLTGVIGGLHAGYNWQLASVVLGVETEFDATSLNRTVQQDAVTT 365
Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKY--ETGKAGEITPIAIGGTAGV 165
+ S + GS+R R G+ D LL++ T G Q G + G
Sbjct: 366 LRSSSALQGSIRARFGWAF-DRLLVFGTGGSQWAGVQNAYHIRGLGDSYSTNHHSWVVGG 424
Query: 166 GVEVGGLSESLVARLEYRASKYSK 189
G+E L++ + R EYR S + K
Sbjct: 425 GIEY-ALTDHWLGRAEYRFSDFGK 447
>gi|49473903|ref|YP_031945.1| hemin binding protein c [Bartonella quintana str. Toulouse]
gi|21689903|gb|AAM68128.1| hemin-binding protein C [Bartonella quintana]
gi|49239406|emb|CAF25744.1| Hemin binding protein c [Bartonella quintana str. Toulouse]
Length = 277
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 83/287 (28%), Gaps = 94/287 (32%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L A S+ A S + QAAD V P V + G Y G
Sbjct: 3 MKWLITA---SAFAFVSASTVQAADVV-----VPPRSTPIAPVI--VAPTFSWTGFYIGG 52
Query: 61 SAL-----------YNGSFGEEAHH------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
NG G I+ G NV+ ++ GV+ D+ ++
Sbjct: 53 QIGGFSSKTKMNILANGKTFPVKDDLLPKLSGFMGGIYVGSNVDLGNGLILGVDTDIIWS 112
Query: 103 VPVLADNIHS---------------------------------------LHGIGGSLRIR 123
G+ R+R
Sbjct: 113 DKKYTKTGKVYEITEQHIPYIKKMLTEAGIAISNNDLKPGAKRVHSFTFKEKWAGATRVR 172
Query: 124 GGYEVSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGVGV 167
G+ ++ ++ Y G Q + +G + T +G T G GV
Sbjct: 173 IGFA-AERIMPYVAGGIAYTQLQDIGSISIKNKDSSKVIASGNLSDETKTFVGYTLGAGV 231
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205
+ ++ ++V R EYR S + K + N +GV KF
Sbjct: 232 D-LAMTNNVVVRAEYRYSDFGKKKFTKGQLETSYKTNDFRVGVAYKF 277
>gi|49475067|ref|YP_033108.1| hemin binding protein a [Bartonella henselae str. Houston-1]
gi|2150037|gb|AAC39274.1| Pap31 [Bartonella henselae phage 60457]
gi|49237872|emb|CAF27068.1| Hemin binding protein a [Bartonella henselae str. Houston-1]
Length = 279
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 53/287 (18%), Positives = 86/287 (29%), Gaps = 95/287 (33%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S +AL S +AQAAD + V +A + G Y G
Sbjct: 3 IKSLMTTSVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVG 53
Query: 64 YNGSFGEEAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV--- 103
S E G I+AG N++ ++ GVE D +
Sbjct: 54 NFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADRED 113
Query: 104 ----------------------------------------PVLADNIHSLHGIGGSLRIR 123
D++ G+ R+R
Sbjct: 114 AKTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVR 173
Query: 124 GGYEVSDSLLLYATVGP------DVAQKYETGKAGE----------ITPIAIGGTAGVGV 167
G+ +D ++ Y G V+ T A + T +G T G GV
Sbjct: 174 IGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGV 233
Query: 168 EVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
+ ++++++ R EYR S + K N +GV KF
Sbjct: 234 DF-AMTDNVLLRAEYRYSDFGKKKFEKEGSEFSYKTNDFRVGVAYKF 279
>gi|312112850|ref|YP_004010446.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311217979|gb|ADP69347.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 233
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 21/201 (10%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+ L+LA+ +++ + A AAD R P I + G Y G++
Sbjct: 7 RSLYLAIIGAAVTVPL--GANAADMYRAPAPTTYAPPPPIVQPN------TWAGFYVGIN 58
Query: 62 ALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDV---RYTVPVLADNIHSLH 114
Y +++ G GYN + +YG+E D+ R T
Sbjct: 59 GGYGWGASDDSTRGDVNGGFGGGQIGYNFQSGNFVYGLETDLQAGRITGKSDDYASKETT 118
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE----ITPIAIGGTAGVGVEVG 170
G+LR R GY ++ LLY T G + + G TAG G+E
Sbjct: 119 DWFGTLRGRLGYAFGNT-LLYGTGGFAYGGVNQKMNYADVLFSNDDTRTGWTAGAGIEY- 176
Query: 171 GLSESLVARLEYRASKYSKVE 191
+S + + EY+ + K +
Sbjct: 177 KVSGNWSLKGEYQYVDFGKED 197
>gi|163867545|ref|YP_001608744.1| hemin binding protein C [Bartonella tribocorum CIP 105476]
gi|161017191|emb|CAK00749.1| hemin binding protein C [Bartonella tribocorum CIP 105476]
Length = 277
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 51/289 (17%), Positives = 87/289 (30%), Gaps = 98/289 (33%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L A S+ A S +AQAAD + PT V + G Y G
Sbjct: 3 MKWLITA---SAFAFVSVSAAQAADVI-------VPPSPTPVAPVIVAPTFSWTGFYFGG 52
Query: 61 SALYNGSFGEEAHH-------------------NAGGSIFAGYNVEDSC-IMYGVEGDVR 100
G G+ G ++AG N++ ++ GV+ D+
Sbjct: 53 QIG--GFSGKTKMDILAKGQKIPVSDDYLPKLSGFMGGLYAGSNIDLGNGLILGVDTDIM 110
Query: 101 YT--VPVLADNIHS-------------------------------------LHGIGGSLR 121
++ + G+ R
Sbjct: 111 WSNKDDTKTGKTYVIAPGHINYINKILKDAAINIGKDALEAGAKRTHSFTFKEKWAGATR 170
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGV 165
+R G+ ++ ++ Y G Q + +G + T +G T G
Sbjct: 171 VRIGFA-AERIMPYVAGGIAYTQLQDTASISITEKDSDKVIASGTLSDETKTLVGYTLGA 229
Query: 166 GVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
GV+ ++ +++ R EYR S + K N +GV KF
Sbjct: 230 GVD-LAMTNNIIVRAEYRYSDFGKKKFSNDKYETSYKTNDFRVGVAYKF 277
>gi|146343868|ref|YP_001208916.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146196674|emb|CAL80701.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 278
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 73/248 (29%), Gaps = 67/248 (27%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L AV SL +AS S AAD P A +++ G Y G
Sbjct: 6 MKTLASAV---SLLIASSLSTFAADL----SARYTKAPPPAAI-------YNWTGGYFGG 51
Query: 61 SALYNGSFGEEAHH-----------------------------NAGGSIFAGYNVEDSCI 91
+ Y G + AGYN +
Sbjct: 52 NIGYGWGRSNLGTTLDQTSSWATEPVPFQNQFVAISNNRLNPSGVVGGLQAGYNWQAGPS 111
Query: 92 MYGVEGDVRYTVPVL-------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138
++G+E D+ + N + +LR R GY + D+ LLY T
Sbjct: 112 VFGIEADINGSGVNKRVVYTGVNVPTTRTFNESIRNDWFMTLRGRAGYAI-DTTLLYVTG 170
Query: 139 GPDVAQKYET---------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G V + K G G T G GVE + + + EY +
Sbjct: 171 GLAVGNVKGSWDLTSGNGYNKTGSADQTRAGWTIGAGVE-HAFAPNWTVKAEYLYTDLGS 229
Query: 190 VEGFYNTI 197
+ +
Sbjct: 230 INYTSGYV 237
>gi|150395644|ref|YP_001326111.1| porin [Sinorhizobium medicae WSM419]
gi|150027159|gb|ABR59276.1| porin [Sinorhizobium medicae WSM419]
Length = 225
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 84/240 (35%), Gaps = 50/240 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++ FL+ ++ + AAD P D+NG Y G
Sbjct: 1 MKRYFLS---AAFLAGALSPVVAADL----------APVESPPAISAPAAFDWNGFYLGG 47
Query: 61 SALYNGS--------FGEEAHHN---AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD- 108
+ + FGE AHH+ G + AGYN + + G E D +
Sbjct: 48 NVGGGRADVDWTYQPFGETAHHDGKGFLGGVQAGYNWQIDGFVIGAEADFLGSSIDGDTP 107
Query: 109 ------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA---- 158
+ S ++R R GY D+LL+YAT G + + G T +
Sbjct: 108 CPNPAYSCTSDTKWLSTVRARAGYSF-DNLLVYATGGLGIGRFEIKTDDGAGTSGSTIRN 166
Query: 159 -IGGTAGVGVEVGGLSESLVARLEYRASKYS------------KVEGFYNTISLGVGMKF 205
G AG GVE G S + + EY + + ++T +GV +F
Sbjct: 167 DTGWVAGAGVEY-GFSPNWSIKAEYMHHDFGERTYTVDGGNPVDADFRFDTGKIGVNYRF 225
>gi|158425586|ref|YP_001526878.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans
ORS 571]
gi|158332475|dbj|BAF89960.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans
ORS 571]
Length = 232
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 68/211 (32%), Gaps = 38/211 (18%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
GVS+LAL +A AAD + + V + G Y G + Y
Sbjct: 5 ALAGVSALALLGCGAASAADLATK---------YPVKAIAPVVPVFSWTGFYIGANVGYA 55
Query: 66 GSFGEEA---------------HHNAGGSIFAGYNVED-SCIMYGVEGDVRY-------- 101
+ + G GYN + + ++ G+E D+ +
Sbjct: 56 WGSTDFHGNTRTGLPYSYSVGGQDDWLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSGV 115
Query: 102 --TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIA 158
P+ I+ G++R R GY D L Y T G Y +
Sbjct: 116 AVNGPLAGQTINGSLDYFGTVRARLGYAF-DKFLPYITGGAAWGHVDYGNIYGVGTSSTN 174
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G T G G E ++ ++ A LEY
Sbjct: 175 WGWTIGAGFEY-AVTNNITAGLEYLYVDLGG 204
>gi|83308753|emb|CAJ01663.1| putative outer-membrane immunogenic protein precursor [Methylocapsa
acidiphila]
Length = 282
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 77/249 (30%), Gaps = 70/249 (28%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + S+ A+A SA AAD RA I + G Y G
Sbjct: 1 MRTF---LLASAGAVALAGSAFAADLPSRAPPPAYVPPAPI---------FTWTGVYIGG 48
Query: 61 SALYNGSFGEEAHHNAG------------------------GSIFAGYNVEDSCIMYGVE 96
Y + + +AG G GYN++ + G+E
Sbjct: 49 QIGYAWTNPNVTYGDAGYTVGGFPLGYADSYNVGGNANGVIGGAHVGYNLQLGQWVLGLE 108
Query: 97 GDVR---------------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
GDV Y + HS GI GS+R R G D LLYAT G
Sbjct: 109 GDVDGSSISKTVSVSPYSSYYADYIPTTFHSNLGIQGSIRGRVGIAW-DRALLYATGGVA 167
Query: 142 VAQ-----------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
+ + +G T G G+E ++ + R EYR
Sbjct: 168 FGGFTSYVSTSYANPQGILSNFPFSGNDSFSQTRVGWTVGGGLEY-AITNNWSVRGEYRY 226
Query: 185 SKYSKVEGF 193
+ + +
Sbjct: 227 TDFGHTSNY 235
>gi|49475276|ref|YP_033317.1| hemin binding protein d [Bartonella henselae str. Houston-1]
gi|49238082|emb|CAF27289.1| Hemin binding protein d [Bartonella henselae str. Houston-1]
Length = 274
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 75/267 (28%), Gaps = 94/267 (35%)
Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---------YNGS---- 67
AQAAD + VP + G Y G Y G
Sbjct: 20 AQAADVI----------VPEQPVPVVAVPAFSWAGFYLGGQVGNFSSKTALSYLGDEKTG 69
Query: 68 -FGEEAH------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIH-------- 111
+ G I+AG N + + + G++ DV ++ I
Sbjct: 70 KWTPVKKEFVPKLSGFVGGIYAGSNFDINNGFIIGIDTDVMWSGKKNTKIITWPEVPPEV 129
Query: 112 -----------------------------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
G+ R++ G+ V D ++ Y G
Sbjct: 130 SSEKKVERVSVGTNQDTSAEVTNGALSHTLKQKWFGATRVKVGF-VVDRMMPYIAGGVAY 188
Query: 143 AQKY---------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
Q + + +G T G G++ ++++++ R EYR S Y
Sbjct: 189 TQLQNIFEKEADKTKKAIDISNVIHDEKKTMVGYTLGGGIDF-AMTDNVIVRAEYRYSDY 247
Query: 188 SKVEGFY---------NTISLGVGMKF 205
K + N +GV KF
Sbjct: 248 GKKKFADEKIEMRYKTNDFRVGVAYKF 274
>gi|163867925|ref|YP_001609129.1| hemin binding protein D [Bartonella tribocorum CIP 105476]
gi|161017576|emb|CAK01134.1| hemin binding protein D [Bartonella tribocorum CIP 105476]
Length = 279
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 81/287 (28%), Gaps = 101/287 (35%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ S +L S QAAD V V + G Y G N
Sbjct: 6 LISTSIFSLISISVLQAADIV----------VSEQPVPVITVPSFSWTGFYLGGQIG-NF 54
Query: 67 SFGEEAHH--------------------NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV 105
S A++ G ++AG N++ + G++ DV ++
Sbjct: 55 SGKTTANYLTKETGIWNPVEKEYLPKLSGFMGGVYAGSNIDIDNGFIIGIDTDVMWSNKK 114
Query: 106 LADNI-------------------------------------HSLHGIGGSLRIRGGYEV 128
+I G+ R++ G+
Sbjct: 115 STKDILLPKKDETGEKKSLEKTSHTRDSHEDASTTLVEGVSHTLKQKWSGATRVKVGFAF 174
Query: 129 SDSLLLYATVGPDVAQKYETGKAG---------------------EITPIAIGGTAGVGV 167
++ Y + G Q A + IG T G GV
Sbjct: 175 E-RMMPYVSGGIAYTQLQNILSAVVDSATVADSESRAIDSSDWLHDEKKTMIGYTLGGGV 233
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTI---------SLGVGMKF 205
+ ++++++ R EYR S + K + + + +GV KF
Sbjct: 234 DF-AMTDNVIVRAEYRYSDFGKKKFVQDKVEMSYKTNDFRVGVAYKF 279
>gi|146342874|ref|YP_001207922.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146195680|emb|CAL79707.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 214
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF-GEEAHHN 75
SAQAAD GRG T+ + + GPY G + Y G A
Sbjct: 20 GSGSAQAADLGY---GYGRGAPYTVNQPLN---AYSWAGPYLGGTLGYQWGTVGNSATKP 73
Query: 76 AG--GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI-HSLHGIGGSLRIRGGYEVSDS 131
+G G + AGYN ++ + G+EGD+ + + G+LR R GY ++
Sbjct: 74 SGLVGGVTAGYNWQNGSPWVLGIEGDINLSGANDTFAPWKFSNPWFGTLRGRVGYAF-NN 132
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
+L Y T G + + A+G T GVG E GL+++ A++EY
Sbjct: 133 ILFYGTGGLALGGLRAETFGLSESHTAVGWTLGVGTEF-GLAQNWTAKIEYLYVD 186
>gi|27378846|ref|NP_770375.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27351995|dbj|BAC49000.1| bll3735 [Bradyrhizobium japonicum USDA 110]
Length = 223
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 29/216 (13%)
Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71
++ F + AA A R P A P+ + + G YAG +A Y S G++
Sbjct: 11 TMCALPFAAVFAAGSACAADLSPRYAAPASAYTAPQPV-YSWTGLYAGFNAGYAES-GDD 68
Query: 72 AHHNAGGSIFA-----------GYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLH---GI 116
A +N G+ GYN + + G+E D D ++S
Sbjct: 69 AFNNLAGATGGKVKGAVGGVQIGYNYQLSPMFVVGIENDFEGGDIKNHDALNSAAVSLPW 128
Query: 117 GGSLRIRGGYE-VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
+ R R G + LL + T G + + G I + +G TAG GVE L
Sbjct: 129 YMTGRARAGIATMDSRLLFFGTAGLAAGEFKD----GPINKMKMGWTAGGGVEWAFL-PK 183
Query: 176 LVARLEYRASKYSKVEGFY------NTISLGVGMKF 205
A+ EY +++ + +T +GV F
Sbjct: 184 WSAKAEYLYTEFKHDDLPDWNAAKFHTFRVGVNYHF 219
>gi|75674930|ref|YP_317351.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419800|gb|ABA03999.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 209
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 23/210 (10%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + +++ L S +A AAD R + VP +++ G Y G
Sbjct: 1 MKKILLITAAVLVSVPAASAADLAPRPYTKAPPYVPA--------PIYNWTGFYLGGHIG 52
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
G+F G + +G++++ ++G+EG + L I + GS
Sbjct: 53 --GAFSNGRDGVFLGGVQSGWDLQFAPNWVFGLEG----SYSFLDSGIAGANLGLGSATA 106
Query: 123 RGGYEVSDSLLLYATVGP--DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
R GY L Y G V + G T G G+E +++ ++
Sbjct: 107 RLGYTWGGPALFYVKGGYGTAVLRGNNAIFGINPNIGLDGYTVGAGLEY-MFTQNWAGKV 165
Query: 181 EYRASKYSKVEGFY-----NTISLGVGMKF 205
EY+ + ++ G +T+ +G+ +F
Sbjct: 166 EYQYFDFGRIAGTNINLDTHTVKVGLNYRF 195
>gi|154246285|ref|YP_001417243.1| porin [Xanthobacter autotrophicus Py2]
gi|154160370|gb|ABS67586.1| porin [Xanthobacter autotrophicus Py2]
Length = 207
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 52/161 (32%), Gaps = 7/161 (4%)
Query: 31 HHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-HNAGGSIFAGYNVEDS 89
GR P + G Y G +A Y + G AGYN + +
Sbjct: 25 DLSGRYPAPYAQPYVQPVAAFTWTGFYIGANAGYGWGSTVNSDPGGFIGGFQAGYNYQFA 84
Query: 90 C-IMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
+ GVE D ++ G++R R G+ D +L+Y T G Q
Sbjct: 85 SPFVLGVETDFNFSGLSAGG---YSLDYLGTVRARLGWSF-DRVLVYGTGGFAYGQGSLD 140
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ G T G G EV + AR EY
Sbjct: 141 VLGLSSSSTQTGWTIGAGAEV-AFDRNWSARAEYLYVDLGS 180
>gi|298292293|ref|YP_003694232.1| porin [Starkeya novella DSM 506]
gi|296928804|gb|ADH89613.1| porin [Starkeya novella DSM 506]
Length = 257
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 72/232 (31%), Gaps = 67/232 (28%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGE--------------EAHHNAG------- 77
P A V + G Y G +A Y G + + +G
Sbjct: 28 PVKAPPMMVVPAFTWTGLYLGGNAGYGWGEGSAPWLGYLDYYYGALDQYGYSGGSDPQGW 87
Query: 78 -GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLA-----------------DNIHSLHGIGG 118
G + GYN + D+ ++ G+E D ++ + I + G
Sbjct: 88 FGGVQVGYNYQFDNNVVLGIEADAQFGELKDSLSYYGTDLFSGVPDLDLGGIETKIEAFG 147
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYET---------------GKAGEITPIAIGGTA 163
++R R GY V D LL Y T G + G T
Sbjct: 148 TVRARLGYAV-DRLLPYVTGGLAWGNVKMSERWDTYMGGVFQPGLTGTASADETLWGWTV 206
Query: 164 GVGVEVGGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205
G GVE +++ + EY + KV+ T+ LG+ KF
Sbjct: 207 GGGVEY-AFTDNWTVKAEYLYADLGDINWDGDAGTKVDVKLQTVKLGINYKF 257
>gi|49475066|ref|YP_033107.1| hemin binding protein c [Bartonella henselae str. Houston-1]
gi|49237871|emb|CAF27067.1| Hemin binding protein c [Bartonella henselae str. Houston-1]
Length = 276
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 82/283 (28%), Gaps = 98/283 (34%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
+++ A AQAAD V PT V + G Y G G F
Sbjct: 6 LITASAFTFVSVAQAADIV-------VPPSPTPVAPVIVAPTFSWTGFYIGGQI---GGF 55
Query: 69 GEEAH--------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA 107
+ G ++AG NV+ ++ GV+ D+ +T
Sbjct: 56 SSKTKMDILSKGKTIPVSDDFLPKLSGFMGGLYAGSNVDLGNGLILGVDTDIIWTDKDDT 115
Query: 108 DNI----------------------------------------HSLHGIGGSLRIRGGYE 127
+ G+ R+R G+
Sbjct: 116 KTVPPYEIAENHVNYVNKMLKDAGINIGDNKLEAGKYTRALGFTFKEKWAGATRVRIGFA 175
Query: 128 VSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGVGVEVGG 171
++ ++ Y G Q + +G + T +G T G GV+
Sbjct: 176 -AERIMPYVAGGIAYTQLQDITSISITKKETGKVIASGNLSDETKTLVGYTLGAGVD-LA 233
Query: 172 LSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
++ +++ R EYR S + K N +GV KF
Sbjct: 234 MTNNVIVRAEYRYSDFGKKKFSNDKYETSYKTNDFRVGVAYKF 276
>gi|312115998|ref|YP_004013594.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221127|gb|ADP72495.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 203
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 25/212 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L G++ ++ + SA +AD R G + V + G YAGL
Sbjct: 1 MKLLSGIAGLTLASVVAIASANSADLYRGQAGGYKDGP-------IVAPVATWTGFYAGL 53
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVE----DSCIMYGVEGDVRYTVPVLADNIHSLHGI 116
+ Y + +A G GYN + S ++ GVE D++ + ++
Sbjct: 54 NVGYGWNDDADA-DGIIGGGQIGYNWQGAFGTSPLVLGVETDIQGSDIKNDNDD--KLNY 110
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
G++R R GY + +S L+YAT G + + G T G GVE + +L
Sbjct: 111 FGTVRGRLGYALGNS-LVYATGGFAYGE------FDGADKTSTGYTVGGGVE-HKFTPNL 162
Query: 177 VARLEYRASKYSKVEGFY---NTISLGVGMKF 205
+ EY + + NT+ +G+ F
Sbjct: 163 SVKAEYLYTDLGDNDSDNADFNTVRVGLNYHF 194
>gi|319898374|ref|YP_004158467.1| Pap31 [Bartonella clarridgeiae 73]
gi|319402338|emb|CBI75877.1| Pap31 [Bartonella clarridgeiae 73]
Length = 292
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 86/301 (28%), Gaps = 110/301 (36%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S +AL + +AQAAD G V V + G Y G
Sbjct: 3 MKCLMTASVVALMTAYAAQAADITVPQETGETIV---------VAPAFSWTGFYVGGQIG 53
Query: 64 -------YNGSFGEEAHH-------------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
++ G+++ G + G NV+ ++ GV+ DV ++
Sbjct: 54 GFSSKTSFSSRDGDDSKKWLPLHKDLWSKPSGFTGGFYTGSNVDLGNGLILGVDTDVIWS 113
Query: 103 VPVLADNIHS-----------------------------------------LHGIGGSLR 121
G+ R
Sbjct: 114 GRKDEKTHEVTVELEDKDKNKHQEKSVSRSPVVFADGEEKEVEITKYGHTLKEKWAGATR 173
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAG----------------------------E 153
IR G+ +D ++ Y G Q ++ +
Sbjct: 174 IRIGFA-ADRIMPYVAGGVAYTQLQDSFSTSVSRQKVSGAKAERADKEPSAEPNTVNTVD 232
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMK 204
+ IG T G GV+ +++++V R EYR S + K + N +GV K
Sbjct: 233 ESKTMIGYTLGAGVDF-AMTDNVVLRAEYRYSDFGKKKLHNDKLEVNYKANDFRVGVAYK 291
Query: 205 F 205
F
Sbjct: 292 F 292
>gi|22852215|dbj|BAC16222.1| hypothetical protein [Bartonella henselae]
Length = 265
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 79/258 (30%), Gaps = 92/258 (35%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
S +AL S +AQAAD + V +A + G Y G G+F
Sbjct: 2 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSS 49
Query: 71 EAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVP------ 104
+ G I+AG N+ ++ GVE D +
Sbjct: 50 KVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTS 109
Query: 105 -------------------------------------VLADNIHSLHGIGGSLRIRGGYE 127
D++ G+ R+R G+
Sbjct: 110 SAKVIREDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFT 169
Query: 128 VSDSLLLYATVGP------DVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGG 171
+D ++ Y G V+ T A + T +G T G GV+
Sbjct: 170 AADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDF-A 228
Query: 172 LSESLVARLEYRASKYSK 189
++++++ R EYR S + K
Sbjct: 229 MTDNVLLRAEYRYSDFGK 246
>gi|240851183|ref|YP_002972586.1| hemin binding protein C [Bartonella grahamii as4aup]
gi|240268306|gb|ACS51894.1| hemin binding protein C [Bartonella grahamii as4aup]
Length = 296
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 86/299 (28%), Gaps = 97/299 (32%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPV---RRAHHGGRGVVPTIA-TNRYVPIRHDFNGP 56
M+ + +S + +AQAAD V + + T V ++G
Sbjct: 1 MKT-KCLIALSIFTFITTSTAQAADTVIFEQSKPKVSLQNDSSSRITPVTVSAPFSWSGF 59
Query: 57 YAGLSALY--------------NGSF-GEEAH-----HNAGGSIFAGYNVEDSC-IMYGV 95
Y G Y +G + + + ++AG N++ +++G
Sbjct: 60 YFGGQIGYFSSKNTLDYAQEARDGKWAWVDRNLSPKPSGLRAGLYAGSNIDLGDDLVFGF 119
Query: 96 EGDVRYTVPVLADNIHSL------------------------------------------ 113
+ D+ ++ +
Sbjct: 120 DTDIVWSGRKSTQTDNGKKILNELDSINIAFKEAGIPIIKPAAQDETIPNYGDIVVSSVT 179
Query: 114 --HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----------------KYETGKAGEIT 155
G+ R R G+ S L+ Y G Q + +G + T
Sbjct: 180 LKEKWSGAARARIGFA-SHRLMPYIAGGIAYTQMQYIMSLLSKSQEDSTVFASGNVLDKT 238
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
G T G G + ++++++ R EYR S + K + + G+ KF
Sbjct: 239 KTLFGYTVGGGFD-LAMTDNIIMRTEYRYSDFFKKKFANDDLKISSQTHDVRFGIAYKF 296
>gi|254470997|ref|ZP_05084400.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960139|gb|EEA95336.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 201
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 25/192 (13%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG------SIFAGYNVEDSC 90
P +A + ++G Y GL + G++ + G F GYN
Sbjct: 12 SFPCVAFADDMSSVGKWDGFYLGLKGGFGQLTGKDTLGSKGTLDSGVVGAFGGYNHSFDR 71
Query: 91 IMYGVEGDV---RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
I+ GVE D+ YT + S S +R GY+ + L Y + G +A+
Sbjct: 72 IVVGVEADLNATNYTSVSDSGVSRSRSKWNTSATVRLGYD-AGMFLPYLSAGVGLAEYEV 130
Query: 148 TGKAG--EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------VEGF 193
A + IG G G+E ++E++ ARL+Y+ + SK +EG
Sbjct: 131 KRFADGQKSENTHIGLVVGAGLEA-MITENVSARLDYKHMEMSKEKYKFQGFNAFHIEGR 189
Query: 194 YNTISLGVGMKF 205
+ ++LGV F
Sbjct: 190 QDLVTLGVAYNF 201
>gi|154246089|ref|YP_001417047.1| porin [Xanthobacter autotrophicus Py2]
gi|154160174|gb|ABS67390.1| porin [Xanthobacter autotrophicus Py2]
Length = 255
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 61/201 (30%), Gaps = 46/201 (22%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG-------------SFGEEAHHNAGGSIFA---GY 84
V + G Y G Y ++ +A + G + GY
Sbjct: 30 PVKAAPVAPAFSWTGFYIGAQGGYAWADNSFSNTHDLYNTYANDASYTLDGGLVGGVIGY 89
Query: 85 NVEDSCIMYGVEGDVRYTVPVLADNI-----------------HSLHGIGGSLRIRGGYE 127
N + + I+ GVE D + + ++ S G++ R G
Sbjct: 90 NYQINNIVLGVEADANWADISGSGSVLRAGELATNCIVSNNPCSSKIDALGTITARLGVA 149
Query: 128 VSDSLLLYATVGPDVAQKYETGK-----------AGEITPIAIGGTAGVGVEVGGLSESL 176
D +LLYA G A T + + G T G GVE +
Sbjct: 150 F-DRVLLYAKGGAAWANVKHTAGSTDYEYPEFSYSASNSNTRWGWTVGAGVEWAFF-NNW 207
Query: 177 VARLEYRASKYSKVEGFYNTI 197
A++EY + +N +
Sbjct: 208 SAKVEYNYIDLGSNDVTFNFV 228
>gi|83308662|emb|CAJ01570.1| outer membrane protein [uncultured bacterium]
Length = 238
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 63/191 (32%), Gaps = 38/191 (19%)
Query: 51 HDFNGPYAGLSALY-----------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
+ G Y G Y G + G GYN++ + + G+EGDV
Sbjct: 38 FTWAGLYLGGQIGYGWGTDTLTVFPRGFGTNFTPNGVVGGAHIGYNLQFNQFVAGLEGDV 97
Query: 100 -----RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GK 150
+ + + GS+R R G D LLYAT G + A +
Sbjct: 98 EGTSIDSSFSPGGVLYSTRIPVQGSIRGRVGVAF-DRALLYATGGAEFAGFNTSENGFPG 156
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG----------------FY 194
+ + G T G G+E ++ + R EYR + + +
Sbjct: 157 FDQNSTTRTGWTVGGGIEY-AVTGNWSIRAEYRYADFGHLTDPTPFTFGFGSFVIHHETE 215
Query: 195 NTISLGVGMKF 205
N + G KF
Sbjct: 216 NAVRAGFSYKF 226
>gi|217979266|ref|YP_002363413.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
gi|217504642|gb|ACK52051.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
Length = 240
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 55/168 (32%), Gaps = 33/168 (19%)
Query: 52 DFNGPYAGLSALYNGSF-------------------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ G Y G Y A G G N + +
Sbjct: 32 TWAGFYLGGQVGYGWGSDSGNVTGGFPLSPTIQTASTSTQTQGAIGGAHIGNNWQIQNFV 91
Query: 93 YGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA- 143
G+EGDV T ++ + G++R R GY + D LLYAT G
Sbjct: 92 IGLEGDVNGTTLSKMSTPLFNNLYFPYTQSPVQGTVRGRLGYAL-DRTLLYATGGLAYGW 150
Query: 144 ---QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
G + G T G GVE ++++ R EYR +++
Sbjct: 151 IHNDYNIFGSRSSFSTTKAGWTIGGGVEF-AVNDNWSVRAEYRYTRFG 197
>gi|49474039|ref|YP_032081.1| hemin binding protein d [Bartonella quintana str. Toulouse]
gi|21689907|gb|AAM68131.1| hemin-binding protein D [Bartonella quintana]
gi|49239543|emb|CAF25900.1| Hemin binding protein d [Bartonella quintana str. Toulouse]
Length = 294
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 80/300 (26%), Gaps = 112/300 (37%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--- 63
+ S +L S AQAAD + +P + + G Y G
Sbjct: 6 LITTSIFSLISISVAQAADVI----------IPEQPESVVAVPAFSWTGFYLGGQIGNFS 55
Query: 64 ------YNGSFGEE--------------AHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
Y ++ G I+ G+N + + GV+ DV ++
Sbjct: 56 SKVDLNYLRDLRDQEVGKWASVKKELLPKPSGFVGGIYGGFNFDFGKGFVIGVDTDVIWS 115
Query: 103 VPVLADN------------IHSLHGIGGSL------RIRGGYEVSDSL------------ 132
+ N G S GG E D +
Sbjct: 116 NKKESKNFNEPMKRRPEILSEEQAGTSKSGIEIPGTEFPGGVEFPDPVPGPERPPFEYDR 175
Query: 133 -------------------------LLYATVGPDVAQKYETGKAG-------------EI 154
+ Y G Q T A +
Sbjct: 176 IIQATLKQKWSGATRVRVGFSGERLMPYIAGGVAYTQIQNTFVAPPNFVVIDFSRFLHDE 235
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI---------SLGVGMKF 205
+G T G GV+ ++++++ R EYR S + K + + + +GV KF
Sbjct: 236 KKTFVGYTLGGGVDF-AMTDNVIMRAEYRYSDFGKKKFGQDRVEIGYKTNDFRVGVAYKF 294
>gi|319405138|emb|CBI78744.1| Pap31 [Bartonella sp. AR 15-3]
Length = 278
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 82/287 (28%), Gaps = 96/287 (33%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S +AL + + QAAD G V V + G Y G
Sbjct: 3 IKCLMTASVVALMTASAVQAADITVPQEVGETIV---------VAPAFSWTGFYFGGQIG 53
Query: 64 YNGSFGEEAHHN--------------------AGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
S + + G +AG NV+ ++ GV+ D+ +
Sbjct: 54 GFSSKTSFSSRDAEDLNKWDSLNKALWSKPSGFMGGFYAGSNVDLGNGLILGVDTDIVLS 113
Query: 103 VPVLAD--------------------------------NIHSLHGIGGSLRIRGGYEVSD 130
N G+ R+R G+ +D
Sbjct: 114 GQKDTKEHTVAVELKDQNAKQQREEQPENAKEAEITKYNHTLKEKWAGATRVRIGFA-AD 172
Query: 131 SLLLYATVGPDVAQKYET-----------------------GKAGEITPIAIGGTAGVGV 167
++ Y G Q +T + + IG T GV
Sbjct: 173 RIMPYVAGGVAYTQLQDTLETSVSQGKMPVQRNDETETSSQTNTVDESKTMIGYTLAAGV 232
Query: 168 EVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205
+ ++++++ R EYR S + K V N +GV KF
Sbjct: 233 DF-AMTDNVMLRAEYRYSDFGKKKLHNDKLEVSYKANDFRVGVAYKF 278
>gi|319783214|ref|YP_004142690.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169102|gb|ADV12640.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 221
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 70/211 (33%), Gaps = 41/211 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L V + A AADP D+ G YAGL
Sbjct: 1 MRRLM--VASAGFLAVLAVPAFAADPAVDVPM--------------TAPGFDWTGYYAGL 44
Query: 61 SALYNGSFGE-------------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT----- 102
A Y + + G AG + + G E D+ Y+
Sbjct: 45 QAGYGWGQSDISVTEGAPFSIAPDIDGGFVGGHVAGL-WQFDQAVLGAEADLNYSSVGGT 103
Query: 103 -VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIA 158
V L + GS+ + GY + D LL+Y G A + AG + T
Sbjct: 104 TVSALGSTFGTDIKWFGSVNAKAGYAM-DRLLVYGIGGVAFAGIETSQVAGPAFDSTRTN 162
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+G T G GV+ L++ V +YR +
Sbjct: 163 VGWTVGAGVDY-ALTDKFVVGAQYRYYDFGS 192
>gi|319406585|emb|CBI80227.1| Hemin binding protein D [Bartonella sp. 1-1C]
Length = 274
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/280 (18%), Positives = 90/280 (32%), Gaps = 86/280 (30%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S QAAD +R VP I+++ + G Y G
Sbjct: 3 IKHLLVACSWTFIPVSMVQAADIMRPHQSQSYQPVPVISSSN----NFSWTGFYVGAQIG 58
Query: 64 YNGSFGEEAHH------------------------NAGGSIFAGYNVEDSC-IMYGVEGD 98
G GE G I+AG NV + ++ G++ D
Sbjct: 59 --GFSGEATRSPTQDSVEEDSEGQEFSKIKSPKLSGFIGGIYAGSNVSLNKGLILGIDAD 116
Query: 99 VRYTVPVLADNIHSLH----------------------GIGGSLRIRGGYEVSDSLLLYA 136
V ++ G+ R+R G+ V D ++ Y
Sbjct: 117 VVWSGKKNTKVFDVQDMNILERSSTDVSSISISHSLQEKWAGATRMRVGFAV-DRVVPYV 175
Query: 137 TVGP----------------DVAQKYETGKAG------EITPIAIGGTAGVGVEVGGLSE 174
+ G +AQ +G + T I +G + G GV+V +++
Sbjct: 176 SGGVSYVQLQNVFTAKGLARALAQARSASPSGSETKVLDETKILVGYSVGGGVDV-AMTD 234
Query: 175 SLVARLEYRASKYSKVEGFYNTI---------SLGVGMKF 205
+++ R EYR S + K + + + +GV KF
Sbjct: 235 NVIMRAEYRYSDFGKKKFAKDNVDLSYKTNDFRVGVAYKF 274
>gi|7514148|pir||JC6528 31K major protein, Pap31 - Bartonella henselae phage
Length = 281
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 86/289 (29%), Gaps = 97/289 (33%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNG--PYAGLS 61
+ + S +AL S +AQAAD + V +A + G Y G
Sbjct: 3 IKSLMTTSVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGTGFYIGGQ 53
Query: 62 ALYNGSFGEEAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV- 103
S E G I+AG N++ ++ GVE D +
Sbjct: 54 VGNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADR 113
Query: 104 ------------------------------------------PVLADNIHSLHGIGGSLR 121
D++ G+ R
Sbjct: 114 EDAKTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATR 173
Query: 122 IRGGYEVSDSLLLYATVGP------DVAQKYETGKAGE----------ITPIAIGGTAGV 165
+R G+ +D ++ Y G V+ T A + T +G T G
Sbjct: 174 VRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGG 233
Query: 166 GVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
GV+ ++++++ R EYR S + K N +GV KF
Sbjct: 234 GVDF-AMTDNVLLRAEYRYSDFGKKKFEKEGSEFSYKTNDFRVGVAYKF 281
>gi|319408048|emb|CBI81702.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 296
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 91/303 (30%), Gaps = 110/303 (36%)
Query: 4 LFLAVGVSSLALASFCSAQAAD-PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS- 61
+ + S AL S +AQAAD PV+ T+ V + G Y G
Sbjct: 3 MKCVITASIFALVSASAAQAADMPVQERPT-------TVLPQVVVAPAFSWTGFYLGGQI 55
Query: 62 ALYNGSFGEEAHHN---------------------AGGSIFAGYNVEDSC-IMYGVEGDV 99
++ + + +N G ++AG NV+ + GV+ D+
Sbjct: 56 GGFSSNSSSKGTYNNVPNGTKEILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDI 115
Query: 100 RYTVPVLA------------------------------------------------DNIH 111
++ + ++
Sbjct: 116 VWSGDKASKSKSYEVAAKPDTPIGDFNPADGVSGGGYLGVATRAKDEGSQIAKPAKGDVT 175
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK--------------------A 151
G+ R+R G D ++ Y G +Q + +
Sbjct: 176 FSDKWSGATRVRLGAAF-DRVMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEG 234
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVG 202
+ +G T G GV+ ++++++ R EYR S + K V+ N +GV
Sbjct: 235 LSDSKTMVGYTLGAGVDF-AMTDTVMLRAEYRYSDFGKKKFVKDKVEVDLKTNDFRVGVA 293
Query: 203 MKF 205
KF
Sbjct: 294 YKF 296
>gi|110632458|ref|YP_672666.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110283442|gb|ABG61501.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 237
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 42/223 (18%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG------- 59
+ ++ A SA AAD + A P ++ GPY G
Sbjct: 3 LLVATAAACVISSSAFAADILYDAPPAPPAP-------PPPPAPFNWTGPYVGVYGGIAA 55
Query: 60 ----------LSALYNGSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVR-------- 100
+ + G E + A G I GY+ + + + G D+
Sbjct: 56 GDIKHNLNVLGNVPFTGLLTERSRAGGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKN 115
Query: 101 --YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-----ETGKAGE 153
Y + S G++R R GY D L+Y G + +
Sbjct: 116 SYYVLGTRIAKDSSKLSYLGTVRARAGYAW-DRTLVYGHGGFAYGKTKQTSDFIGTDTLK 174
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
+ G T G GVE +++ + EY + K + + +
Sbjct: 175 QSQTRTGWTIGAGVEY-AVTDRISLGSEYSYVDFGKKDIYKDA 216
>gi|319405139|emb|CBI78745.1| Hemin binding protein d [Bartonella sp. AR 15-3]
Length = 262
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 70/254 (27%)
Query: 16 ASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYNGSFGEEAHH 74
QAAD ++ VP IA+ + G Y G ++G + +
Sbjct: 15 IPVSIVQAADIMKPHQSQSYQPVPLIAS----SSSFSWTGFYFGGQIGGFSGEATLKDKN 70
Query: 75 NAG--------------GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS------- 112
+A G ++AG NV ++ G++ D+ ++ ++
Sbjct: 71 DASEDSKLLSPELSGFIGGVYAGSNVGLGKDLILGIDTDMVWSGKKYTKVVNVPGDIEKV 130
Query: 113 ----------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY---------- 146
G+ R+R G+ + D ++ Y + G Q
Sbjct: 131 TYRFIKRPNDRFDYVLKEKWAGATRMRVGF-IVDRVMPYVSGGVSYVQLQSVFEVKSSNT 189
Query: 147 ------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------ 194
+ T I +G + G G++V +++++V R EYR S + K +
Sbjct: 190 QKQNVGINEVKLDETKILVGYSIGGGIDV-AMTDNVVMRAEYRYSDFGKKKFAEEDGELS 248
Query: 195 ---NTISLGVGMKF 205
N +GV KF
Sbjct: 249 YKTNDFRVGVAYKF 262
>gi|154246283|ref|YP_001417241.1| porin [Xanthobacter autotrophicus Py2]
gi|154160368|gb|ABS67584.1| porin [Xanthobacter autotrophicus Py2]
Length = 236
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 64/183 (34%), Gaps = 30/183 (16%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAG-------GSIFAGYNVE-DSCIMYGVEGDVR-- 100
+ G Y G +A Y G++ AG G AGYN + + I+ G+E D++
Sbjct: 56 FSWTGFYIGGNAGYGWGSGQDELGVAGVDPKGWFGGGQAGYNYQFSNNIVAGIEADIQGG 115
Query: 101 ---------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151
+ + S G++R R GY +L Y T G
Sbjct: 116 DIGASASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAF-GPILPYVTGGFAWGNNSIDYLG 174
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVG 202
+ G TAG G+E L++ A+ EY + T +G+
Sbjct: 175 ASQSQTHTGWTAGAGIEY-ALTDHWTAKTEYLYTDLGSKFYDTLGASAGVTAQTARIGIN 233
Query: 203 MKF 205
KF
Sbjct: 234 YKF 236
>gi|209883207|ref|YP_002287064.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
gi|209871403|gb|ACI91199.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
Length = 644
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 74/216 (34%), Gaps = 46/216 (21%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
V + A + AQAAD +D+NG Y G Y+
Sbjct: 1 MVMTAAFPALS-AQAADL---------------PLKAPAIPAYDWNGAYVGAHIGYSFGT 44
Query: 69 GEE---------AHHNAGG---SIFAGYNVEDSC-IMYGVEGDVRY-----------TVP 104
HH+ GG AGYNV I+ G E D+ + T P
Sbjct: 45 AHGEVIDGSAFPTHHHFGGAMAGFHAGYNVLLPSRILLGAEADISFPSYFESNALIATTP 104
Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPIAIG 160
+ + GSLR R GY + LLY T G A + + G
Sbjct: 105 TAGNMLTERLDYAGSLRARLGYA-TPQWLLYVTGGFAFAGERFENELAPFKDKRIAYRTG 163
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
TAG G+E ++ ARLEY S + + N+
Sbjct: 164 WTAGAGIEY-AIAPLWSARLEYLYSDFGRTSVVMNS 198
>gi|297248917|ref|ZP_06932626.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|297174251|gb|EFH33607.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 176
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 31/166 (18%)
Query: 70 EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHSLHGIGGS 119
+ G + AGYN + D+ ++ G E D + + L + G+
Sbjct: 12 DATAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGT 71
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAGVGVEVGG 171
+R R GY ++ L++Y T G + G+ G T G G E
Sbjct: 72 VRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKAGWTLGAGAEY-A 130
Query: 172 LSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205
++ + + EY + K +T+ +G+ KF
Sbjct: 131 INNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 176
>gi|217977073|ref|YP_002361220.1| porin [Methylocella silvestris BL2]
gi|217502449|gb|ACK49858.1| porin [Methylocella silvestris BL2]
Length = 239
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 61/196 (31%), Gaps = 40/196 (20%)
Query: 48 PIRHDFNGPYAGLSALYNG--------------SFGEEAHHNAGGSIFAGYNVEDSCIMY 93
++G Y G Y S G GYN++ + I+
Sbjct: 36 APIFTWSGLYLGGQIGYGWANNALSGWGPFFVFSGASYNPSGVLGGAHVGYNLQFNQIVL 95
Query: 94 GVEGDVRYTVPVLADNI-----HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
G+EGDV T + + GS+R R G+ V D L Y T G A
Sbjct: 96 GLEGDVEATGVDKTYAFGPTVYTTQIPVQGSIRARFGFAV-DRALFYVTGGAAFASVTNQ 154
Query: 149 G----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----------- 193
+ G T G G+E L+ + R EYR S + +
Sbjct: 155 YQSYLGYNSLNRSFAGWTIGGGLEY-ALTNNWSVRAEYRYSDFGTATDYTFTAGPGGNVA 213
Query: 194 ----YNTISLGVGMKF 205
N +G KF
Sbjct: 214 RHLTENAARVGFSYKF 229
>gi|115525004|ref|YP_781915.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115518951|gb|ABJ06935.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 219
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 77/222 (34%), Gaps = 31/222 (13%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + ++ LA ++ AAD R + V +++G YAG+
Sbjct: 1 MKKILLATTALLAMGATSFAADLPARVYTK---------APVLVAPGVNWSGFYAGVFGG 51
Query: 64 YNGSFGEEAH---------HNAGGSIFAGYNVEDS--CIMYGVEGDV-RYTVPVLADNIH 111
Y S + + G GYN + ++G+E D ++
Sbjct: 52 YGWSQDIKVDGLAIATDEINGGFGGGTVGYNWQAPGSQWVFGIEVDAAGSSLKYTTVGFE 111
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
GS+ R GY V D+ L YA G A T + + G T G G+E
Sbjct: 112 DKIDAFGSVTGRVGYAV-DAALFYAKGGFAWADNKVTVPGFSESKLHTGWTVGGGLEY-M 169
Query: 172 LSESLVARLEYRASKYSK--------VEGFYNTISLGVGMKF 205
+ + + EY + Y K + +T+ GV F
Sbjct: 170 FAPAWSVKGEYMYADYGKETYGNIVDIGATVHTVKAGVNYHF 211
>gi|92115870|ref|YP_575599.1| putative outer membrane protein [Nitrobacter hamburgensis X14]
gi|91798764|gb|ABE61139.1| putative outer membrane protein [Nitrobacter hamburgensis X14]
Length = 452
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 55/181 (30%), Gaps = 33/181 (18%)
Query: 45 RYVPIR-HDFNGPYAGLSALYNGSFGEE---------------AHHNAGGSIFAGYNVED 88
Y P+ ++NG Y G + A G + AGYN +
Sbjct: 235 TYAPVATANWNGFYLGGNVGSGTGRDRTTVTNLATGESAAFNLAPDGFIGGVQAGYNWQA 294
Query: 89 SCIMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
I+YG+E D + + N ++ G++R R GY V L YAT
Sbjct: 295 GNIVYGLETDFQGSTMEDNKTCIGCEPGASLNFNAKLQWLGTVRGRLGYAV-GPSLFYAT 353
Query: 138 VGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG 192
G + G T G G+E + + EY K
Sbjct: 354 GGFAYGNVKTAINEVNFSDTRTGWTVGGGIETPFTLFGLFGPNWTSTTEYLYVDLGKSTN 413
Query: 193 F 193
Sbjct: 414 G 414
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 72/223 (32%), Gaps = 44/223 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ L V ++ A+ SAQAAD R + +D+ G Y G+
Sbjct: 1 MKRILLGVLLAGTAM----SAQAADLAPR----------PYTKAPVMAPVYDWTGFYLGV 46
Query: 61 SALYNGSFGEEAHH--------------NAGGSIFAGYNVEDSCI----MYGVEGDVRYT 102
+A + A G GYN + + + GVE D++
Sbjct: 47 NAGLGLGRDRTVNDFGDGTGNSTYLQPLGAIGGGQIGYNWQTNSFLGPLVLGVEADIQGA 106
Query: 103 V------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---- 152
+ + G+ R R G V+ L Y T G G A
Sbjct: 107 DMTDNRTNINGVQYNQKLDWFGTARGRIGL-VNGPTLTYLTGGYAYGNVSTRGVADGVPF 165
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
+ G T G GVE L + ++EY ++
Sbjct: 166 AFSGNRSGWTWGSGVEA-ALGGNWTGKIEYLYVDLGNRTDVFD 207
>gi|13470446|ref|NP_102014.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021187|dbj|BAB47800.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 221
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 76/235 (32%), Gaps = 52/235 (22%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
L V + L A AADP D+ G YAGL A Y
Sbjct: 4 LVVASAGLLAVLSVPALAADPTVDVPM--------------TAPGFDWTGYYAGLQAGYG 49
Query: 66 GSFGE-------------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL------ 106
+ + + G AG + + G E D+ Y+
Sbjct: 50 WGQSDISGTEGEPFSVSPDINGGFVGGHIAGL-WQFDQAVIGAEADLNYSSVNGTAEAEP 108
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTA 163
+N + GS+ + GY + D +L+Y G A + AG T +G T
Sbjct: 109 GNNFGTDIKWFGSVNAKAGYAM-DRVLVYGIGGVAFAGIETSQSAGSAFSETRANVGWTL 167
Query: 164 GVGVEVGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMKF 205
G GV+ L++ V +YR + + NT+ + + KF
Sbjct: 168 GAGVDY-ALTDKFVVGAQYRYYDFGSEHYDGSSDFVGRDQDTKLNTVGINLSYKF 221
>gi|319783284|ref|YP_004142760.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169172|gb|ADV12710.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 217
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 35/190 (18%)
Query: 49 IRHDFNGPYAGLSA--------LYNGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEG 97
+ GPYAG+ +Y A HN G FAGYN++ I+YGVEG
Sbjct: 30 PEWTWQGPYAGVFGAGTLEHYKIYGPGAQAGATHNVGSATVGGFAGYNLQSGKIVYGVEG 89
Query: 98 DVRYTVPVLADN-------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150
++ Y + + + G+ GS++ R G ++ + + T G A+
Sbjct: 90 ELGYRFKKNTFDDIPGPGVLDASTGLFGSVKGRVGMDMGA-YMPFVTAGVTAAKLKTFYP 148
Query: 151 AG--EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-------------N 195
G E +GG G G++V L+ ++ R EY S + K Y +
Sbjct: 149 GGNAERDATLVGGVVGAGIDV-ALTHNVFLRGEYDFSFFGKKSLEYCGGGCTLEHTLQTH 207
Query: 196 TISLGVGMKF 205
+G+ MKF
Sbjct: 208 DFRVGIAMKF 217
>gi|319403667|emb|CBI77252.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498]
Length = 295
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 86/306 (28%), Gaps = 112/306 (36%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M + + S +AL + + QAAD G V V + G Y G
Sbjct: 1 MNNMKCLITTSVVALITASAVQAADIRVPQEIGETIV---------VAPAFSWTGFYLGA 51
Query: 61 SAL-------YNGSFGEEAHH-------------NAGGSIFAGYNVEDSC-IMYGVEGDV 99
++G +++ G +AG NV+ ++ GV+ DV
Sbjct: 52 QIGGFSSKTSFSGPADDDSKKWLPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDV 111
Query: 100 RYTVPVLADNIHS----------------------------------------------L 113
++ N
Sbjct: 112 VFSGQKDTKNDKVTSELDKDNNNNNAPAGAKDKDNGKPEPEKEPEKEKDVKFTQYDHTLK 171
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-------------------------T 148
G+ RIR G+ +D ++ Y G Q +
Sbjct: 172 AKWAGATRIRIGFA-ADRIMPYVAGGVAYTQLQDTFTTLTGIKKVPAQKAEGTDKETSGK 230
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISL 199
+ + IG T GV+ ++++++ R EYR S + K + N +
Sbjct: 231 SNTVDESKTMIGYTLAAGVDF-AMTDNVLLRAEYRYSDFGKKKLHNDKFEVNYKANDFRV 289
Query: 200 GVGMKF 205
GV KF
Sbjct: 290 GVAYKF 295
>gi|27379811|ref|NP_771340.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352964|dbj|BAC49965.1| blr4700 [Bradyrhizobium japonicum USDA 110]
Length = 229
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 66/197 (33%), Gaps = 32/197 (16%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVE 96
P V +++ G Y G+ G GG + AGYN + +++GVE
Sbjct: 27 PYTKAPVAVASVYNWTGFYLGIVGGGAWENGSGDPKMKGGFVGGTAGYNWQTGNVVFGVE 86
Query: 97 GDVRYT--------------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
D + V + S G++R R GY V +++L Y T G
Sbjct: 87 ADGTWADVSASATGATVVPGFGVATATVSSKTDAMGTVRGRIGYAV-NNVLFYGTGGYAW 145
Query: 143 AQKYET----GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---- 194
T G + + G T G GVE + + EY F
Sbjct: 146 IDNKITLSALGVSVSDSKFHSGWTVGAGVEA-FFAPQWSVKGEYLYRSLGGETYFSGALP 204
Query: 195 ------NTISLGVGMKF 205
+T+ +GV F
Sbjct: 205 TGTLNFHTVQVGVNYHF 221
>gi|15420174|gb|AAK97309.1|AF308167_1 Pap31 [Bartonella henselae phage 60457]
Length = 241
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/254 (18%), Positives = 78/254 (30%), Gaps = 92/254 (36%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72
+AL S +AQAAD + V +A + G Y G G+F +
Sbjct: 1 IALISXSAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48
Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVP-------- 104
G I+AG N++ ++ GVE D +
Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSA 108
Query: 105 -----------------------------------VLADNIHSLHGIGGSLRIRGGYEVS 129
D++ G+ R+R G+ +
Sbjct: 109 KVIREDELVNFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAA 168
Query: 130 DSLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLS 173
D ++ Y G V+ T A + T +G T G GV+ ++
Sbjct: 169 DRIMPYVAGGVSYAQVQAVSSTKVTKAADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMT 227
Query: 174 ESLVARLEYRASKY 187
++++ R EYR S +
Sbjct: 228 DNVLLRAEYRYSDF 241
>gi|49473904|ref|YP_031946.1| hemin binding protein a [Bartonella quintana str. Toulouse]
gi|8575707|gb|AAF78059.1|AF266281_1 hemin-binding surface protein A precursor [Bartonella quintana]
gi|21689904|gb|AAM68129.1| hemin-binding protein A [Bartonella quintana]
gi|49239407|emb|CAF25745.1| Hemin binding protein a [Bartonella quintana str. Toulouse]
Length = 272
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 84/284 (29%), Gaps = 96/284 (33%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S +AL S +AQAAD + A + G Y G
Sbjct: 3 IKSLITTSVIALVSASAAQAADVIATHE----------AAPVITTPNFSWTGFYIGGQI- 51
Query: 64 YNGSFGEEAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV 103
G+F + G I+AG N++ ++ GVE D +
Sbjct: 52 --GNFTSDNKIKGLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWAD 109
Query: 104 --------------------------------------PVLADNIHSLHGIGGSLRIRGG 125
++D+ G+ R R G
Sbjct: 110 CEATKTSAIRTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIG 169
Query: 126 YEVSDSLLLYATVGP---------------DVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
+ D ++ Y G K G + T + +G T GV+V
Sbjct: 170 FSAFDRVMPYFAGGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMMVGFTVSGGVDV- 228
Query: 171 GLSESLVARLEYRASKYSKVEGFYNT---------ISLGVGMKF 205
++ +++ R EYR S + K + NT GV KF
Sbjct: 229 AMTGNVLLRGEYRYSDFGKKKFLNNTQEFNYKTNDFRFGVAYKF 272
>gi|170750202|ref|YP_001756462.1| carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
gi|170656724|gb|ACB25779.1| Carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
Length = 708
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 78/243 (32%), Gaps = 69/243 (28%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
A V + L + +A+AAD P D++G Y GL
Sbjct: 11 TAALVLTAPLLAPVAARAADLF------------APRPTAQAPAYTDWSGGYVGLEGSAG 58
Query: 66 GSFGE----------------EAHHNAG------------GSIFAGYNVEDSCIMYGVEG 97
GS+G ++ + G G +F G+N + +YG+E
Sbjct: 59 GSYGAYSFGPTTIGGRPVPPFKSGDSTGRSDQGKNATTATGGLFGGWNWQAGPWVYGIEA 118
Query: 98 D----------------VRYTVPVLADN-IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
Y A N + + + G+LR R GY D L+Y T G
Sbjct: 119 SLDAANLKRPVPSTIAGFGYADTTPAFNIVRAKTDLYGALRARLGYSF-DRYLIYGTFGL 177
Query: 141 DVAQKYETGKAGEITP----------IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
A ++ +G T G GV+ +++SL ++YR
Sbjct: 178 AGANARILANYPDLDAGGQTAARRDLDYVGFTLGAGVQY-AITDSLALGIDYRYIDLGGS 236
Query: 191 EGF 193
F
Sbjct: 237 RRF 239
>gi|27375206|ref|NP_766735.1| hypothetical protein blr0095 [Bradyrhizobium japonicum USDA 110]
gi|27348342|dbj|BAC45360.1| blr0095 [Bradyrhizobium japonicum USDA 110]
Length = 675
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 75/219 (34%), Gaps = 45/219 (20%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+ L A ++S + +++AAD +A + +D+ G Y G
Sbjct: 20 RYLRTAAAIASGVMVLPAASRAADLPLKAPA--------------LKTVYDWTGLYIGAH 65
Query: 62 ALYNGSFGEEA------------HHNAGGSIFAGYNVE-DSCIMYGVEGDVRY------- 101
A G + AGYN +S ++ GVEGD+ +
Sbjct: 66 VGVTRGTSSATLIDPTLATDDHVFTGATGGVQAGYNWRLNSGLLLGVEGDISFPNYLPSN 125
Query: 102 ----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA--QKYETGKAGEIT 155
+ + + SLR R GY + + L YAT G + T G
Sbjct: 126 HVVSSAATVLSSAEERWDYVASLRARLGYT-TGNWLFYATGGAAFTGERFLSTPTGGTEE 184
Query: 156 P---IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
G TAG GVE + ARLEY SK+
Sbjct: 185 KVLHTRFGWTAGGGVEY-AFAPHWSARLEYLYSKFDNAN 222
>gi|90422268|ref|YP_530638.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
gi|90104282|gb|ABD86319.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
Length = 447
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 31/176 (17%)
Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAH-------------HNAGGSIFAGYNVEDSCIMYG 94
++ G Y G + + G GYN + S +YG
Sbjct: 240 APVANWTGFYLGGNFGSAFARNRTTASIGPFSEQFNLGLDGFAGGGQVGYNWQASNWVYG 299
Query: 95 VEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
+E D + + D + G++R R GY + S L Y T G
Sbjct: 300 LEADFQGSTQRDNDTAVLFGLAAYDAKLPWFGTVRGRLGYSL-GSTLFYGTGGYAYGNVK 358
Query: 147 --ETGKAGEI--TPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEGF 193
T G + A G TAG G+E + + ++ EY
Sbjct: 359 TTITAGTGSETISKTASGWTAGAGIETPFTLLGLVGPNWTSKTEYLYVDLGSTTSD 414
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 61/216 (28%), Gaps = 43/216 (19%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ + + SAQAAD +A + +V +D+ G Y G++A
Sbjct: 4 ILAGVALIGTAVSAQAADLATKAPYYKAPIV----------AVYDWTGFYVGVNAGAGLG 53
Query: 68 FGEEAHH--------------NAGGSIFAGYNVED----SCIMYGVEGDVRYTVPVLAD- 108
+ A G GYN + ++ G+EGD +
Sbjct: 54 RDRAIQNFAPGLTSTTYLQPFGALGGGQIGYNYQTNSLFGPLVIGLEGDFQGADLSDTRT 113
Query: 109 ------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET------GKAGEITP 156
N + R R G +L Y T G T
Sbjct: 114 TLSGPVNYSQKLDWFATARGRIGIA-RGPVLNYFTGGFAAGDVRTTVTEGGFTAFDSGKR 172
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
G T G GVE L + ++EY
Sbjct: 173 TLTGWTIGSGVEA-ALGGNWTGKIEYLHLDLGNKTD 207
>gi|148255740|ref|YP_001240325.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407913|gb|ABQ36419.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. BTAi1]
Length = 212
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 59/174 (33%), Gaps = 15/174 (8%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVE 96
PT + + G Y G Y A G GYN + +++G+E
Sbjct: 27 PTYTKAPVLAPVQTWTGFYIGAFGGYANEDASTAALKGGFAGGT-VGYNWQQGPLVFGLE 85
Query: 97 GDVRYTVPVLADNIHSLHGI------GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150
D + I + G+ G++R R GY D++LLY T G +
Sbjct: 86 ADAAWADINATVGIPGVFGLTDRIESTGTVRGRIGYAF-DTVLLYGTGGYAWGNNKLSAT 144
Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
AG T G AG GVE + + EY F + LG
Sbjct: 145 VGGVAGSETKFLSGWAAGAGVE-WMFAPKWSLKGEYLYKSLESSTYFGGAVPLG 197
>gi|75674387|ref|YP_316808.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419257|gb|ABA03456.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 453
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 79/244 (32%), Gaps = 55/244 (22%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ L V ++S A+ SAQAAD R + +D+ G Y G+
Sbjct: 1 MKKILLGVLLASTAM----SAQAADLAPR----------PYTKAPPIAPVYDWTGLYVGV 46
Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVEDSCI----MYGVEGDVRYTV 103
+A H A G GYN + + ++G+E D++
Sbjct: 47 NAGLGLGRNRAVHDFGVGAISTHLQPLGAVGGGQIGYNWQTNSFFGPLVFGIEADIQGAD 106
Query: 104 PVLADNIHSL-------HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---- 152
+ G+ R R G ++ +L Y T G T G
Sbjct: 107 MTDNRTNFAGLLQYNQRLDWFGTARGRVGL-INGPMLTYVTGGWAYGHVGTTVIQGGVPF 165
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-----------VEGFYNTISLGV 201
+ G T G GVE L + ++EY + E N G+
Sbjct: 166 AFSGGRNGWTFGSGVEA-ALGGNWTGKIEYLYLDFGNRTDSFAGQALRSEMRENIFRAGL 224
Query: 202 GMKF 205
+F
Sbjct: 225 NYRF 228
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 55/190 (28%), Gaps = 41/190 (21%)
Query: 42 ATNRYVPIR-HDFNGPYAGLSALYNGSFGEE--------------AHHNAGGSIFAGYNV 86
A+N Y P+ ++NG Y G + A G GYN
Sbjct: 230 ASNPYAPVATANWNGLYLGGNVGGGVGRNRTTISNPAGNLAQFNLAPDGFVGGGQIGYNW 289
Query: 87 EDSCIMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135
+ I+ G+E D + + +S G++R R GY V +S + Y
Sbjct: 290 QAGNIVLGLETDFQGATLQDNKTCIGCVPGASFDFNSKLQWFGTVRGRLGYAVGNS-MFY 348
Query: 136 ATVGPDVAQKYETGKAG----EITPIAIGGTAGVGVEV----------GGLSESLVARLE 181
AT G + G G G+E + + E
Sbjct: 349 ATGGFAYGNIRTALNTPLNNFNFSNTRTGYAVGGGIETPLPMVNLFGGPLFGPNWTSTTE 408
Query: 182 YRASKYSKVE 191
Y +
Sbjct: 409 YLFVDLGRSS 418
>gi|225853091|ref|YP_002733324.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|256263422|ref|ZP_05465954.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|260565169|ref|ZP_05835653.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|265991667|ref|ZP_06104224.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|265995505|ref|ZP_06108062.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|225641456|gb|ACO01370.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|260151237|gb|EEW86331.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|262766618|gb|EEZ12407.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|263002451|gb|EEZ15026.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|263093434|gb|EEZ17484.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|326409637|gb|ADZ66702.1| outer membrane protein Omp31 [Brucella melitensis M28]
gi|326539339|gb|ADZ87554.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 202
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 47/182 (25%)
Query: 70 EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL---------------------A 107
+ G + AGYN + + ++ G E D + + +
Sbjct: 22 DVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNGDLSDIGVAGNLSGDES 81
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAI 159
+ + G++R R G+ ++ L++Y T G + + A + +
Sbjct: 82 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTKA 141
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----------------NTISLGVGM 203
G T G GVE ++ + + EY + K Y +T+ LG+
Sbjct: 142 GWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRLGLNY 200
Query: 204 KF 205
KF
Sbjct: 201 KF 202
>gi|17986685|ref|NP_539319.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|256045237|ref|ZP_05448134.1| outer membrane protein Omp31 [Brucella melitensis bv. 1 str. Rev.1]
gi|256114189|ref|ZP_05454943.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|17982306|gb|AAL51583.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 201
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 47/182 (25%)
Query: 70 EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL---------------------A 107
+ G + AGYN + + ++ G E D + + +
Sbjct: 21 DVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNGDLSDIGVAGNLSGDES 80
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAI 159
+ + G++R R G+ ++ L++Y T G + + A + +
Sbjct: 81 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTKA 140
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----------------NTISLGVGM 203
G T G GVE ++ + + EY + K Y +T+ LG+
Sbjct: 141 GWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRLGLNY 199
Query: 204 KF 205
KF
Sbjct: 200 KF 201
>gi|154246284|ref|YP_001417242.1| porin [Xanthobacter autotrophicus Py2]
gi|154160369|gb|ABS67585.1| porin [Xanthobacter autotrophicus Py2]
Length = 232
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 67/206 (32%), Gaps = 43/206 (20%)
Query: 41 IATNRYVPIR-HDFNGPYAGLSALYNG----------------SFGEEAHHNAGGSIFAG 83
+P++ + G Y G + + S+ + G + G
Sbjct: 29 PVKAAPIPVQTFSWTGFYIGGNVGWGWADNTYDVTPFGSLIGYSYSPGTGNGFIGGLQTG 88
Query: 84 YNVED-SCIMYGVEGDVRYT----------VPVLADNIHSLHGIGGSLRIRGGYEVSDSL 132
YN + + ++ GVE D ++ P I G++R R GY + D
Sbjct: 89 YNYQFANNVVIGVEADFDWSDIGSSSLVVGGPFTGGAISQNIDYFGTIRARLGYGI-DRF 147
Query: 133 LLYATVGPD-VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L Y T G Q + G T G GVE ++ + + EY ++K
Sbjct: 148 LPYITGGAAWAKQNFSDFYGNTYNDTKWGWTVGAGVEY-AITNNWTVKAEYLYLGFNKNT 206
Query: 192 GFY------------NTISLGVGMKF 205
+T LGV KF
Sbjct: 207 TNDYFGDSYSVGSNISTAKLGVNYKF 232
>gi|307942791|ref|ZP_07658136.1| porin [Roseibium sp. TrichSKD4]
gi|307773587|gb|EFO32803.1| porin [Roseibium sp. TrichSKD4]
Length = 183
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 27/181 (14%)
Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHN---------AGGSIFAGYNVEDSCIMYGVEGD 98
P + + G Y G YN G++ + G AGYN + GVE +
Sbjct: 7 PETNSWQGFYIGGHFGYNWMNGQDDLDDGIGTTSLSSVIGGFHAGYNHMFGQFLLGVEAE 66
Query: 99 VRYTV--PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156
+ A + + + R+R GY L YAT G +A + + +
Sbjct: 67 GNLSDLNGQTAGGLDASSNWMIAGRVRAGYAFE-HFLAYATAGVSMADASLS-GTKKSSN 124
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA------------SKYSKVEGFYNTISLGVGMK 204
G G G+E +++++ ARLEY+ + Y KV+ + + G+
Sbjct: 125 THTGLVVGGGLEA-FVTQNISARLEYQHHWLNEQSYNTNNTDY-KVDAELDIVRAGLSYH 182
Query: 205 F 205
F
Sbjct: 183 F 183
>gi|319408782|emb|CBI82439.1| Hemin binding protein c [Bartonella schoenbuchensis R1]
Length = 275
Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 80/281 (28%), Gaps = 93/281 (33%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ S L + AQA ++ V + G Y G G
Sbjct: 6 LITASIFTLVASSVAQA------ESGRISQESMSVVLPNVVAPSFSWTGFYFGGQI---G 56
Query: 67 SFGEEAH------------------------HNAGGSIFAGYNVE-DSCIMYGVEGDVRY 101
F + G ++AG N + ++ ++ GV+ DV +
Sbjct: 57 GFSSKTDLNLNLKGVGSTKLSSIEKDLLPKLSGFMGGLYAGANFDLNNSLVLGVDTDVIW 116
Query: 102 TVPVLADNIHS---------------------------------------LHGIGGSLRI 122
+ I G+ R+
Sbjct: 117 SDKKDTKVIRHSGYKTKDGGHGVQRQHHLQEAVSSDELLEKFIVTVSHTLKQKWAGATRM 176
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYE---------TGKAGEITPIAIGGTAGVGVEVGGLS 173
R G+ V D ++ Y G Q + K + T IG T G G++ ++
Sbjct: 177 RVGFAV-DHIMPYIAGGVAYTQLQDILLVSTGIKKDKIVDETKAMIGYTFGGGIDFAMMN 235
Query: 174 ESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
+ ++ R EYR S + K + N +GV KF
Sbjct: 236 DLIL-RAEYRFSNFGKKKFIKDKFEIDYKTNDFRVGVSYKF 275
>gi|298292422|ref|YP_003694361.1| porin [Starkeya novella DSM 506]
gi|296928933|gb|ADH89742.1| porin [Starkeya novella DSM 506]
Length = 203
Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 56/170 (32%), Gaps = 20/170 (11%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHH--NAGGSIFAGYNVEDSC--IMYGVEGDVRYTVPVL 106
+ G Y G +A Y + + G + AGYN + + ++ GVE D +Y
Sbjct: 39 FTWTGFYIGANAGYGFGEADFSGDIDGFIGGLQAGYNWQGAGSPLVLGVETDFQYADVSS 98
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
+ G++R R GY D L+Y T G G T G G
Sbjct: 99 S---VFSLDYFGTVRARVGYAF-DQFLVYGTGGFAYGAGSYELLGLTNDRNHFGWTVGAG 154
Query: 167 VEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205
E L + + EY V N I GV +F
Sbjct: 155 AEY-ALGNNWSVKGEYLYLDMGEETYATFTGPRDVGLTSNVIRAGVNYRF 203
>gi|77917690|ref|YP_355505.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM
2380]
gi|77543773|gb|ABA87335.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM
2380]
Length = 225
Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 58/166 (34%), Gaps = 25/166 (15%)
Query: 49 IRHDFNGPYAGLSALYNGSFGEEAHH------------NAGGSIFAGYNVEDSCIMYGVE 96
D++GPY G ++ + E + G ++ G+N IM G E
Sbjct: 31 ALSDYSGPYIGGFVGHSWADLEYSDSWNPGYDLNADIEGFVGGLYFGHNYMIDNIMLGFE 90
Query: 97 GDVRYTVPVLADNIHSLH--------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
D + ++ + LR R G+ V ++ L Y G VA+
Sbjct: 91 ADAGIGDLGEGADKNNSYNDWSAFDIDWDAHLRARAGF-VYNTTLFYVAGGLAVAKVAVD 149
Query: 149 G---KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
G G T G G+E ++E L AR+EY Y
Sbjct: 150 DTDSGYGGDNATHFGWTIGAGIE-QKITEHLTARIEYLYDDYGSES 194
>gi|240849916|ref|YP_002971305.1| hemin binding protein A [Bartonella grahamii as4aup]
gi|240267039|gb|ACS50627.1| hemin binding protein A [Bartonella grahamii as4aup]
Length = 288
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 65/249 (26%), Gaps = 84/249 (33%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAH---------------HNAGGSIFAG 83
T + G Y G ++G E G I+ G
Sbjct: 41 TAPAVISAAPSFSWTGFYIGGQVGNFSGKVDEFDSETKKKITDKDWTPKPSGFMGGIYVG 100
Query: 84 YNVEDSC-IMYGVEGDVRYTVPVLA----------------------------------- 107
NV+ ++ GVE D + +
Sbjct: 101 SNVDLGNGLILGVETDAVWADREDSKTHSAVIGETGLAAFKNKLTAAEATFASGKNIDNV 160
Query: 108 -------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI------ 154
+ G+ R+R G+ D +L Y G Q
Sbjct: 161 TKDGKRVEGTSIKEKWSGATRVRIGFAAVDRILPYFAGGIAYTQLQVVNSLKAEGADGAE 220
Query: 155 ---------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NT 196
+ +G T G GV+ ++++++ R EYR S + K N
Sbjct: 221 IASAKMFDQSKTMVGFTVGGGVDF-AMTDNVLLRAEYRYSDFGKKAFVKDEDKIAYKTND 279
Query: 197 ISLGVGMKF 205
+GV KF
Sbjct: 280 FRVGVAYKF 288
>gi|90418791|ref|ZP_01226702.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
gi|90336871|gb|EAS50576.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 71/237 (29%), Gaps = 55/237 (23%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L L + ++ A AAD + P V + G Y G
Sbjct: 1 MKRLALLLATTAF----VTPALAADVIYEEPPA-----PAPMAIEPVATTATWTGLYIGG 51
Query: 61 SAL---------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
A ++ + G GY+ + + + G D+
Sbjct: 52 QAGVAFGNESDGATFNPGGGGPFGTGTYSEDDDNAGFIGGGHIGYDYQINDFVVGAVADI 111
Query: 100 RYTVPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG 149
Y + + G G++R R GY + DS+LLY T G A
Sbjct: 112 NYIDAETNRSYTTGGGSTFSTSSDINYLGTVRARVGYAM-DSVLLYGTGGLAYAGVDNNA 170
Query: 150 KAGEITPIA-------------IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
A + IG G GV+V + ++ +EY + +
Sbjct: 171 SAPASSGTFTNYTFEQDENDTDIGYAVGGGVDVMA-TNNISFGVEYLYTNLGSNDQT 226
>gi|92115908|ref|YP_575637.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
gi|91798802|gb|ABE61177.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
Length = 245
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/232 (21%), Positives = 80/232 (34%), Gaps = 41/232 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ LA V+ + +A+ AQAAD R T A +++ G Y G
Sbjct: 18 MKKILLA-SVAIVGMAAIVPAQAADLAAR--------PYTKAPVYEAAPIYNWTGFYLGG 68
Query: 61 ----------SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN 109
+ G G GY+ + ++G+ Y+ D+
Sbjct: 69 HVGGAFGGDHNLAAPGFTRNGNDGVFMGGGQIGYDYQFSPNWVFGIGA--NYSFLDTNDH 126
Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-----GGTAG 164
G+ GS+ R GY LLYA G A T G T G T G
Sbjct: 127 PFVNRGL-GSVTGRLGYTW-GPALLYAKGGYAWADTRNTNGFGGDTFSNNRIGRDGFTVG 184
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGF-----------YNTISLGVGMKF 205
G+E +++ +EY+ + +TI +G+ +F
Sbjct: 185 GGLEY-MFTQNWSGLIEYQYYDFGTTRTTFRNQDVRFRNDEHTIKVGLNYRF 235
>gi|83308665|emb|CAJ01573.1| outer membrane protein [uncultured bacterium]
Length = 275
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 57/184 (30%), Gaps = 43/184 (23%)
Query: 51 HDFNGPYAGLSALYNGS------------------FGEEAHHNAGGSIFAGYNVEDSCI- 91
++G Y G+ Y F G GYN++ +
Sbjct: 51 FTWSGLYLGVQVGYAWGSDPVDEVDVLTPRFANNAFFNLQPKGVLGGAHVGYNLQFTNWN 110
Query: 92 -------MYGVEGDVRYTVPVLADNIHSL------HGIGGSLRIRGGYEVSDSLLLYATV 138
+ G+EG V + S GSLR R G D LL+Y T
Sbjct: 111 WLSSSGVVIGLEGSVDGSSLSGTRTSASGLTMRLRTETQGSLRARIGLAW-DRLLIYGTG 169
Query: 139 GPDVAQKYETGKA---------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G A + + + G T G GV+ ++ + +EYR S + +
Sbjct: 170 GAAFAGFDDNYVTVFGTPFFVDEQDSKTRTGWTVGGGVDY-AITPNWSIGVEYRYSDFGR 228
Query: 190 VEGF 193
+
Sbjct: 229 TTDY 232
>gi|260460749|ref|ZP_05808999.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
gi|259033326|gb|EEW34587.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
Length = 221
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 79/234 (33%), Gaps = 50/234 (21%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
L V + L A A AADP D+ G YAG+ A Y
Sbjct: 4 LIVASAGLLAALSVPALAADPTVDVPM--------------TAPGFDWTGYYAGMQAGYG 49
Query: 66 GSFGEEAHH---------NAGGSIFAGYN---VEDSCIMYGVEGDVRYTVPVLADNIHSL 113
+ + + GG G+ + + G E D+ Y+ ++ +
Sbjct: 50 WGQSDISGTGGGPFSVSPDIGGGFVGGHVAGLWQFDQAVIGAEADLNYSSVDGTADLGAG 109
Query: 114 H------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAG 164
+ GS+ + GY V D +L+Y G A + AG T +G T G
Sbjct: 110 NTLGTDVKWFGSVNAKAGYAV-DRVLVYGIGGVAFAGIETSQSAGAAFSETRTNVGWTVG 168
Query: 165 VGVEVGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMKF 205
GV+ L++ V +YR + + NT+ + + KF
Sbjct: 169 AGVDY-ALTDKFVVGAQYRYYDFGSEHFDGSNGFADRDQDTKLNTVGVNLSYKF 221
>gi|300024284|ref|YP_003756895.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526105|gb|ADJ24574.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 218
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 69/191 (36%), Gaps = 27/191 (14%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVE 96
P A Y P ++G Y G++ Y S G GYN + +++G+E
Sbjct: 32 PPPEAAPVYQPAI--WDGAYIGINGGYGWSDARPTEPEGGFGGGQIGYNWQRGRVVFGLE 89
Query: 97 GDV------RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKY 146
GD D S ++R R G+ S LLYAT G VA +
Sbjct: 90 GDFQGADISGRAYTFDGDTARSDMNWFSTVRGRLGFT-SGPWLLYATGGLAVADVDHRAN 148
Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA------------SKYSKVEGFY 194
G++ + G G G+E S++ A+ EY + ++
Sbjct: 149 LEGQSFRGSDTLTGYAVGGGLE-WKFSQNWSAKAEYLYLGLGDSKLTADNGDFVRINNDV 207
Query: 195 NTISLGVGMKF 205
T+ +G+ F
Sbjct: 208 QTVRVGLNYHF 218
>gi|15420180|gb|AAK97312.1|AF308170_1 Pap31 [Bartonella henselae phage 60457]
Length = 240
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 77/253 (30%), Gaps = 92/253 (36%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72
+AL S +AQAAD + V +A + G Y G G+F +
Sbjct: 1 IALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48
Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV--------- 103
G I+AG N+ ++ GVE D +
Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTSSA 108
Query: 104 ------------------------PVLADNIHS----------LHGIGGSLRIRGGYEVS 129
+D++ G+ R+R G+ +
Sbjct: 109 KVIREDELANFKDSLKNANAVFAKDKTSDDVKQDEKHTDSLALKEKWSGATRVRIGFTAA 168
Query: 130 DSLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLS 173
D ++ Y G V+ T A + T +G T G GV+ ++
Sbjct: 169 DRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMT 227
Query: 174 ESLVARLEYRASK 186
++++ R EYR S
Sbjct: 228 DNVLLRAEYRYSD 240
>gi|115522754|ref|YP_779665.1| porin [Rhodopseudomonas palustris BisA53]
gi|115516701|gb|ABJ04685.1| porin [Rhodopseudomonas palustris BisA53]
Length = 446
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 51/175 (29%), Gaps = 30/175 (17%)
Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAH------------HNAGGSIFAGYNVEDSCIMYGV 95
++ G Y G + + G GYN + + ++G
Sbjct: 241 APVANWAGFYLGGNFGSGTARERTTATRVATEQFNLAPDGFIGGGQIGYNWQAANWVFGG 300
Query: 96 EGDVRYTVPVLA--------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
E D + + D+ + ++R R GY V S L Y T G V
Sbjct: 301 EADFQGSTQRDNRTIVQGGVDSYDAKLPWLATVRGRLGYSV-GSTLFYGTGGYAVGSVKT 359
Query: 148 T----GKAGEITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEGF 193
+ T G TAG G+E + ++ EY V
Sbjct: 360 SIATPAFTETFTKTKSGWTAGAGIETPFTLFNLFGPNWTSKTEYLYVDLGSVNNT 414
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 66/215 (30%), Gaps = 42/215 (19%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ + + SAQAAD +A + +V +D+ G Y G++A
Sbjct: 4 ILAGVALVGTAVSAQAADLAVKAPYLKAPIV----------AVYDWTGFYIGVNAGVGLG 53
Query: 68 FGEEAHH--------------NAGGSIFAGYNVEDSCI----MYGVEGDVRYTVPVLADN 109
H+ A G GYN + + + G+E D++ T
Sbjct: 54 RDLATHNITPAAFATTYLQPQGALGGGQVGYNWQTNSFLGPLVLGLEADIQGTGMSDDRT 113
Query: 110 I--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----KAGEITPI 157
G+ R R G +L Y T G T + I
Sbjct: 114 NLFGNVAAYSQKLDWFGTARGRIGLA-KGPVLSYFTGGFAYGNVKTTVTEGLASDSINRT 172
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
G T G GVE L + ++EY +
Sbjct: 173 QTGWTIGSGVEA-ALGGNWTGKIEYLYVNLGNKDD 206
>gi|299132804|ref|ZP_07025999.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2]
gi|298592941|gb|EFI53141.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2]
Length = 694
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/193 (24%), Positives = 72/193 (37%), Gaps = 35/193 (18%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALY----------NGSFGEEAHHN--AGGSIFAGYNVE 87
D++G Y G Y +G+ +H A + AGYNV
Sbjct: 69 AADFPVKAAPVFDWSGAYVGAHFAYGFGSSHASVFDGASFNTRNHFGTATAGVQAGYNVV 128
Query: 88 DSCIM-YGVEGDVRYTVPVLADN-----------IHSLHGIGGSLRIRGGYEVSDSLLLY 135
+ GVE D+ + + + + GSLR R GY + LLY
Sbjct: 129 LPSRVLLGVEADLSFPNYIESSGGVAVTPTMNGTLTERLDYAGSLRARLGYA-APRWLLY 187
Query: 136 ATVGPDVA--QKYETGKAGEITPIAI--GGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
T G A + T A + +++ G AGVG E + AR+EY S Y +
Sbjct: 188 VTGGLAFAGERFEYTSPAFDDKKLSLRTGWIAGVGAEY-AIGPKWSARVEYLYSDYGR-- 244
Query: 192 GFYNTISLGVGMK 204
+ + LG G++
Sbjct: 245 ---DHVQLGSGLQ 254
>gi|3426106|emb|CAA07721.1| hypothetical protein [Rhizobium leguminosarum]
Length = 139
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 47/138 (34%), Gaps = 18/138 (13%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
++ + + S A AAD V + P D++G Y GL
Sbjct: 1 MYTKIIALAAVAFSAVPAFAADAVVQD--------PAYVQQGQTQSAFDWSGFYLGLQGG 52
Query: 64 YNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
Y E+ I+ GYN + ++G+E D Y D
Sbjct: 53 YTSTHASYLDGSEQDLDGGSTGIYGGYNFQHGPFVFGIENDFNYNWK---DGSDVSLKWD 109
Query: 118 GSLRIRGGYEVSDSLLLY 135
GS R R GY + D L+Y
Sbjct: 110 GSARGRVGYAL-DRTLIY 126
>gi|319899124|ref|YP_004159217.1| Hemin binding protein d [Bartonella clarridgeiae 73]
gi|319403088|emb|CBI76643.1| Hemin binding protein d [Bartonella clarridgeiae 73]
Length = 303
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/316 (15%), Positives = 86/316 (27%), Gaps = 124/316 (39%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L S AL AQAAD V +PT+ + P + G Y G
Sbjct: 1 MKRLTT----SIFALLLVSEAQAADFV---IPYQSSTIPTVIS----PPHFSWTGIYFGG 49
Query: 61 SAL--------YNGSFGEEAH-----------HNAGGSIFAGYNVEDSC-IMYGVEGDVR 100
Y + GE G ++AG + + + ++ G + D+
Sbjct: 50 HVGGFEGPSTSYMSTQGERQKLLFKNNPSPKFSGVIGGLYAGASFDVNNGLVLGFDTDIN 109
Query: 101 YTVPVLADNIHS---------------------------------------LHGIGGSLR 121
++ ++ G+ R
Sbjct: 110 WSGAKDEKSVDMDSFVMALRKMDNVSNKDNVSNKIFPGFSLEQFISLKQTLKQKWVGATR 169
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETG-------------------------------- 149
+R G+ D ++ Y G +
Sbjct: 170 VRIGFGF-DRIMPYVAGGVAYTHLKDVYVMETVTQETLKTGIRQSSQSSQSSQSSQSSQS 228
Query: 150 -----------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----- 193
IG T G G++ ++++L+ R EYR S ++ E
Sbjct: 229 SQSSQSSQLDFSMESEKKTMIGFTIGGGLD-LAVTDNLILRAEYRYSDFNNKEFTKERFT 287
Query: 194 ----YNTISLGVGMKF 205
N S+GV KF
Sbjct: 288 IKYKSNGFSVGVAYKF 303
>gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 212
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 26/221 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+++ AV + + +A SA AAD + + V + HD++G Y G
Sbjct: 2 LKRSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVASGP--------HDWSGNYIGA 53
Query: 61 SALYNGSFGE---EAHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHG 115
+ S A G + G N++ +++G E G+ +
Sbjct: 54 QIGASSSKVPGPFTNRTGALGGVVVGKNMQSGNVVFGAELEGNFAEAEHRIGHGGSLQQS 113
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
G+ + + GY D L+Y T G V + G G GVE L+
Sbjct: 114 WNGNAKGKVGYAF-DKTLVYGTAGYGVTRFKAKDNTTSAPGWEGGALIGAGVE-QALTGP 171
Query: 176 LVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
L + EY ++S V+ ++I G+ KF
Sbjct: 172 LSVKAEYDFQRFSDVKSRVNGVEQRNNLKNHSIKAGLNYKF 212
>gi|85713978|ref|ZP_01044967.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85699104|gb|EAQ36972.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 453
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 70/221 (31%), Gaps = 44/221 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ L V ++S A+ SAQAAD R + +D+ G Y G+
Sbjct: 1 MKRILLGVLLASTAM----SAQAADLAPR----------PYTKAPPMAPVYDWTGLYLGV 46
Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVED----SCIMYGVEGDVRYTV 103
+A H A G GYN + I++GVE D++
Sbjct: 47 NAGLGVGRNRAVHDFGPLAISTHLQPLGAVGGGQIGYNWQTNSFFGPIVFGVEADLQGAD 106
Query: 104 PVLADNIHSLH-------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQ---KYETGKAGE 153
G+ R R G V+ ++ Y T G G
Sbjct: 107 MTDNRTNFIGALQYNQRLNWFGTARGRVGL-VNGPMMTYLTGGWAYGNVGTTVIQGGVPS 165
Query: 154 I-TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
G T G GVE L + ++EY F
Sbjct: 166 AFGGGRSGWTWGSGVEA-ALGGNWTGKIEYLYLDLGNRTDF 205
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 41/186 (22%)
Query: 46 YVP-IRHDFNGPYAGLSALYNGSFGEE--------------AHHNAGGSIFAGYNVEDSC 90
YVP + ++NG Y G + A + G GYN +
Sbjct: 234 YVPMVTANWNGLYLGGNFGGGVGRNRTTISNPAGNLAQFNLAPNGFVGGGQIGYNWQAGN 293
Query: 91 IMYGVEGDVRYT-----------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
I++G+E D + + VP + + +S G++R R GY V +S + YAT G
Sbjct: 294 IVFGLETDFQGSTLEDNKACFFCVPGASVDFNSKLQWFGTVRGRLGYAVGNS-MFYATGG 352
Query: 140 PDVAQKYETGKAG----EITPIAIGGTAGVGVEV----------GGLSESLVARLEYRAS 185
+ G G G+E + + EY
Sbjct: 353 FAYGNVQTALNTPLNNFSFSNTRTGYAVGGGIETPLPLVNLFGGPLFGPNWTSTTEYLYV 412
Query: 186 KYSKVE 191
+
Sbjct: 413 DLGRSS 418
>gi|158425587|ref|YP_001526879.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
gi|158332476|dbj|BAF89961.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
Length = 202
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 8/143 (5%)
Query: 52 DFNGPYAGLSALYN-GSFGEEAHHNAGGSIFAGYNVEDSC--IMYGVEGDVRYTVPVLAD 108
+ G Y G + Y GS G ++ G + AGYN++ + I+ G+E D +
Sbjct: 40 SWTGFYVGGNIGYGWGSAGADSPKGFLGGLQAGYNLQMAGSPIVLGLETDFDWAGMNDG- 98
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+ G++R R G+ D +L+Y T G + + + G G G E
Sbjct: 99 --NYSQDYIGTVRARAGFAF-DRVLIYGTAGFAYGKGSYQVFGLSNSQTSYGWALGAGAE 155
Query: 169 VGGLSESLVARLEYRASKYSKVE 191
+ + AR EY
Sbjct: 156 Y-AIDRNWSARAEYMYVDLGNST 177
>gi|148258659|ref|YP_001243244.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1]
gi|146410832|gb|ABQ39338.1| putative outer membrane protein with ompA domain [Bradyrhizobium
sp. BTAi1]
Length = 662
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 62/175 (35%), Gaps = 31/175 (17%)
Query: 44 NRYVPIRHDFNGPYAGLSALYN-------------GSFGEEAHHNAGGSIFAGYNV-EDS 89
R D++G Y G A Y G+ G + AGYN S
Sbjct: 35 ARMAQTVFDWSGIYVGAHAGYTRDHAQASLIDPIGGAGAGSRFSGLTGGVQAGYNWVTRS 94
Query: 90 CIMYGVEGDVRYTVPVL-----------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138
++ G EGD + + ++ L S R R GY D L+YAT
Sbjct: 95 GLLLGFEGDFSFPNSLTSNHTVAMLNRPGSSVSELWDYVASARGRIGYAQGD-WLVYATG 153
Query: 139 G--PDVAQKYETGKAGEIT--PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G + T AG+ +G TAG G+E + RLEY S++
Sbjct: 154 GLAWTGGRFINTTAAGDEKLLTTRVGWTAGAGIE-RAFAPHWSWRLEYLYSQFEN 207
>gi|240849917|ref|YP_002971306.1| hemin binding protein A [Bartonella grahamii as4aup]
gi|240267040|gb|ACS50628.1| hemin binding protein A [Bartonella grahamii as4aup]
Length = 296
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 82/303 (27%), Gaps = 116/303 (38%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ S L S +AQAAD + + + G Y G G
Sbjct: 6 LIATSVATLISASAAQAADVMIPHEVAPAVIA--------AAPSFSWTGFYLGGQV---G 54
Query: 67 SFGEEAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106
+F + G I+AG NV+ ++ GVE D +
Sbjct: 55 NFSSKTKVTIPGEERELFKKDNIPSPSGFMGGIYAGSNVDLGNGLILGVETDAVWADREE 114
Query: 107 ADNIHS----------------------------------------LHGIGGSLRIRGGY 126
+ G+ R+R G+
Sbjct: 115 SKKARELTLTEKNAADFNAALEKAKVELKDQQQFQKDDKVTETHSYKEKWSGATRVRIGF 174
Query: 127 EVSDSLLLYATVGPD-------------VAQKYETGKAG--------------------- 152
D ++ Y G + KAG
Sbjct: 175 AAVDRIMPYVAGGIAYAQVQGIQSVAGKGERAKVEQKAGGDEIVPEAGAKQSIDLTGGTW 234
Query: 153 -EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT---------ISLGVG 202
+ T +G T G GV+ ++++++ R EYR S + K + +T +GV
Sbjct: 235 ADDTKTMLGFTIGGGVDF-AMTDNVLLRAEYRYSDFGKKKFANDTREFNYKTNDFRVGVA 293
Query: 203 MKF 205
KF
Sbjct: 294 YKF 296
>gi|148252036|ref|YP_001236621.1| putative 31 kDa outer-membrane immunogenic protein [Bradyrhizobium
sp. BTAi1]
gi|146404209|gb|ABQ32715.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 219
Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 26/176 (14%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE-DSCIMYGVEGDV 99
+ G YAG + + + + AG G + AGYN + + G+E D+
Sbjct: 45 FSWTGFYAGANVGGAFTGNDSVTNLAGGNGGKLSGVIGGMQAGYNYQVSPLFVVGIENDL 104
Query: 100 RYTVPVLADNI---HSLHGIGGSLRIRGGYEVSD-SLLLYATVGPDVAQKYETGKAGEIT 155
+T ++ + R R G+ + D L LY T G + + G +
Sbjct: 105 DFTGLSRQGDLVNPAVSVPWLTTGRARAGFTMLDQRLFLYGTAGLAAGELKD----GPVH 160
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------NTISLGVGMKF 205
+ +G TAG G E L A+LEY + +++ +G+ F
Sbjct: 161 KVKMGWTAGGGAEWAFL-PKWSAKLEYLYTDLKHDALPDWRAAKIHSVRVGLNYHF 215
>gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188]
gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 26/221 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+++ AV + + +A SA AAD + + V HD++G Y G
Sbjct: 2 LKRSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVAAGP--------HDWSGNYVGA 53
Query: 61 SALYNGSFGE---EAHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHG 115
+ S A G + G N++ +++G E G+ + +
Sbjct: 54 QVGASSSRVPGPFTNRTGALGGVVVGKNMQSGNVVFGGELEGNFAEAEHRIGNGGSLQQS 113
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
G+ + + GY D L+Y T G V + G G GVE LS
Sbjct: 114 WNGNAKGKVGYAF-DKTLVYGTAGYGVTRFKAKDNTTSAPGWEGGALVGAGVE-QALSGP 171
Query: 176 LVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
L + EY +++ V+ ++I G+ KF
Sbjct: 172 LSVKAEYDFQRFNDVKSRVNGVEQRNNLKNHSIKAGLNYKF 212
>gi|319404477|emb|CBI78084.1| Hemin binding protein D [Bartonella rochalimae ATCC BAA-1498]
Length = 267
Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 81/273 (29%), Gaps = 84/273 (30%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63
+ S L S QA D V + P + + + G Y G
Sbjct: 4 LTASVFTLFSISIVQATDFV--IPYQSYTASPVV-----LSSTFSWTGFYFGGKIGVFSG 56
Query: 64 -------------YNGSFGEEAH---HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV- 105
+N F ++ G ++ G N+ + + G + D+ ++
Sbjct: 57 QSTSSFIDSNNVKHNIIFQNQSSPKLSGVVGGLYTGLNININNGFVLGFDTDINWSGAKD 116
Query: 106 ----------LADNIHSLH-----------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
ADN ++R R G+ D ++ Y G V +
Sbjct: 117 TKVIDIIASLKADNNKKSQIDFDIKQSLQQKWLSAIRGRIGFSF-DRVMPYIAGGISVTK 175
Query: 145 KYETGK-----------------------AGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
T + + I G T G G++ ++++ + R E
Sbjct: 176 LQSTYLKFFVPSKNNSLTRSSLEKTPPVLSTSNSKIMNGYTIGGGLDF-AITDNFILRAE 234
Query: 182 YRASKYSKVEGFYNTISL---------GVGMKF 205
Y S + K E N +++ GV KF
Sbjct: 235 YNYSDFGKKEFVNNNMNVSYKSNAFYFGVACKF 267
>gi|90419518|ref|ZP_01227428.1| possible outer membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336455|gb|EAS50196.1| possible outer membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 273
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 71/240 (29%), Gaps = 58/240 (24%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L++ +S AL AQAAD + A P+ + G Y G+
Sbjct: 1 MRTYLLSILTASTALTFASYAQAADVIYEEPM-------APAPMEISPVASGWTGIYLGV 53
Query: 61 SAL----------------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ +F + G GY+ + ++
Sbjct: 54 QGGGAFNPQDPDNVDLRTNGFAFGGSAVQTAFGSNFDSNVDSSFLGGAHIGYDYQMDSVV 113
Query: 93 YGVEGDVRYTVPVLADNIHSLH----------GIGGSLRIRGGYEVSDSLLLYATVGPDV 142
+GV D+ + N S G++R R GY V+ L Y T G
Sbjct: 114 FGVLADINAIDLTRSSNADSNAPAYYRTDRELNYLGTVRARVGYLVTPDALAYVTGGLAY 173
Query: 143 AQ------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
T + G T G G+EV ++++ EY +
Sbjct: 174 GDVDYSFSTNSPAVTGATPAVVSEDEDSFGYTVGGGMEV-KFTDNMSFGAEYLYTNLGGS 232
>gi|76885942|gb|ABA60112.1| pap31-like protein [Bartonella bacilliformis]
Length = 300
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 87/310 (28%), Gaps = 120/310 (38%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ V S AL S +AQAAD + +P + + G Y G
Sbjct: 3 IKCLVTASVCALISASAAQAADVM----------IPQEISPIISAPTFSWTGLYLGGQIG 52
Query: 64 ----------------YNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV- 105
+ + + G ++AG N++ ++ GV+ D+ +
Sbjct: 53 GLSGKHDFKAIGKDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEG 112
Query: 106 -----------------------------------LADNIHSLHGIGGSLRIRGGYEVSD 130
L N G+ R+R G+ +D
Sbjct: 113 KLFSNHRAETQDDADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFG-AD 171
Query: 131 SLLLYATVGPDVAQKYETGKA--------------------------------------- 151
++ Y + G Q G A
Sbjct: 172 RIMPYVSGGVAYTQVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALD 231
Query: 152 -------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI------- 197
+ +G T G GV+ ++++++ R EYR S + K + + I
Sbjct: 232 VLASGTITDEKKTLLGYTLGAGVDF-AMTDNVILRTEYRYSDFGKKKFVKDAIETNYKTN 290
Query: 198 --SLGVGMKF 205
+GV KF
Sbjct: 291 DFRVGVAYKF 300
>gi|121602865|ref|YP_989466.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120615042|gb|ABM45643.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 300
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 87/310 (28%), Gaps = 120/310 (38%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ V S AL S +AQAAD + +P + + G Y G
Sbjct: 3 IKCLVTASVCALISASAAQAADVM----------IPQEISPIISAPTFSWTGLYLGGQIG 52
Query: 64 ----------------YNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV- 105
+ + + G ++AG N++ ++ GV+ D+ +
Sbjct: 53 GLSGKHDFKAIGKDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEG 112
Query: 106 -----------------------------------LADNIHSLHGIGGSLRIRGGYEVSD 130
L N G+ R+R G+ +D
Sbjct: 113 KLSSNHKAETQDDADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFG-AD 171
Query: 131 SLLLYATVGPDVAQKYETGKA--------------------------------------- 151
++ Y + G Q G A
Sbjct: 172 RIMPYVSGGVAYTQVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALD 231
Query: 152 -------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI------- 197
+ +G T G GV+ ++++++ R EYR S + K + + I
Sbjct: 232 VLASGTITDEKKTLLGYTLGAGVDF-AMTDNVILRTEYRYSDFGKKKFVKDAIETNYKTN 290
Query: 198 --SLGVGMKF 205
+GV KF
Sbjct: 291 DFRVGVAYKF 300
>gi|39933549|ref|NP_945825.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas
palustris CGA009]
gi|39647395|emb|CAE25916.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris CGA009]
Length = 736
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 68/195 (34%), Gaps = 41/195 (21%)
Query: 49 IRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG---SIFAGYNVEDS-CIMYG 94
+D++G Y G A Y + + + + AGG AGYN ++ G
Sbjct: 113 PAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLLG 172
Query: 95 VEGDVRY-----------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV- 142
VE D+ + N G++R R G ++ L Y T G
Sbjct: 173 VEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGV-IAGRWLGYVTGGLAFE 231
Query: 143 -AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------ 189
+ G + IG AG GVE G + + AR+EY S+Y
Sbjct: 232 HERYLTDPDVGRVMNARIGWAAGAGVEY-GFTPNWSARVEYLYSQYQNATVDLPTGASYA 290
Query: 190 VEGFYNTISLGVGMK 204
T+ +GV K
Sbjct: 291 TSLNLQTVRVGVNRK 305
>gi|15420178|gb|AAK97311.1|AF308169_1 Pap31 [Bartonella henselae phage 60457]
Length = 239
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 77/252 (30%), Gaps = 92/252 (36%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72
+AL S +AQAAD + V +A + G Y G G+F +
Sbjct: 1 IALISPSAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48
Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVP-------- 104
G I+AG N++ ++ GVE D +
Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSA 108
Query: 105 -----------------------------------VLADNIHSLHGIGGSLRIRGGYEVS 129
D++ G+ R+R G+ +
Sbjct: 109 KVIREDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAA 168
Query: 130 DSLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLS 173
D ++ Y G V+ T A + T +G T G GV+ ++
Sbjct: 169 DRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMT 227
Query: 174 ESLVARLEYRAS 185
++++ R EYR S
Sbjct: 228 DNVLLRAEYRYS 239
>gi|85713475|ref|ZP_01044465.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A]
gi|85699379|gb|EAQ37246.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A]
Length = 668
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 69/184 (37%), Gaps = 34/184 (18%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE---------EAHHNAGG---SIFAGY 84
+PT A + G Y G A + G ++ GG + AGY
Sbjct: 37 SIPTKAVPH---PIIQWTGLYLGAHAGFGGGRSTATLADPAPITTGNDFGGLISGVQAGY 93
Query: 85 NVEDSC-IMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRGGYEVSDSL 132
N++ ++ GVE D+ + + ++ ++ GS R R GY +
Sbjct: 94 NLQLPSGLLLGVETDISFPSYIESNSFVSKLATARSDVTHQWDFIGSARGRIGYA-TGPW 152
Query: 133 LLYATVGPDVA--QKYETGKAGEITPIA---IGGTAGVGVEVGGLSESLVARLEYRASKY 187
L YAT G +A + +G+ +G AG G+E + ARLEY ++
Sbjct: 153 LTYATGGLAIAGERYLNDPPSGDREKTLGSRLGWVAGAGLEY-AFAPHWSARLEYLYYQF 211
Query: 188 SKVE 191
K
Sbjct: 212 DKTN 215
>gi|90426297|ref|YP_534667.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
gi|90108311|gb|ABD90348.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
Length = 251
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 80/233 (34%), Gaps = 41/233 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K L V+ +A+A+ A AAD T A +++ G Y G
Sbjct: 22 MKKFLLGT-VALVAMATTVPALAADL--------GARTYTKAPAYVAAPIYNWTGFYIGG 72
Query: 61 SALYNGSFGEEAHHNAG----------GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADN 109
G+F + G G + GY+ + + GVE +
Sbjct: 73 HVG--GAFVGDDSIGTGATRSSDGTFLGGVQGGYDYQFAPNWVLGVEAQYSWLDQGTDPV 130
Query: 110 IHSLHGIG------GSLRIRGGYEVSDSLLLYATVGPDVAQ----KYETGKAGEITPIAI 159
+ + GS+ R GY LLYA G A G ++ +
Sbjct: 131 LVGPYSFSDKQKGLGSVTGRIGYTW-GPALLYAKGGYAFADYDTTVTLGGVGAAVSSKSD 189
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVE-------GFYNTISLGVGMKF 205
G T G G+E +++ ++EY+ + V+ + + G+ +F
Sbjct: 190 GYTVGAGLEYL-FAQNWSGKVEYQYYDFGNVDFGGFSFKNDEHVVKAGLNYRF 241
>gi|146340936|ref|YP_001205984.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193742|emb|CAL77759.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 217
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 76/233 (32%), Gaps = 44/233 (18%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ LA + A PT + + G Y G
Sbjct: 1 MKKILLATVALAALAAPAA------------AADLAARPTYTKAPVLAPVPTWAGFYLGA 48
Query: 61 SALY----NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA--------- 107
Y NG AGG+I GYN + +YG+E D + +
Sbjct: 49 FGGYATTDNGGVLSPKGGFAGGTI--GYNWQSGAWVYGLEADAAWADIKDSVGGVVPGFG 106
Query: 108 -DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITPIAIGGT 162
I S G+ R R GY +++LLY T G A T G T G T
Sbjct: 107 AVGIASKIDATGTARGRVGYAF-NNVLLYGTGGYAWANNKITLSALGVGVSDTQFLSGWT 165
Query: 163 AGVGVEVGGLSESLVARLEYRASKYSKVEGF----------YNTISLGVGMKF 205
AG GVEV + + EY + F +++ +GV F
Sbjct: 166 AGGGVEVL-FAPKWSVKAEYLYKSFDGKTYFGGALPTGNLNLHSVQVGVNYHF 217
>gi|15420176|gb|AAK97310.1|AF308168_1 Pap31 [Bartonella henselae phage 60457]
Length = 245
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 86/251 (34%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
S +AL S +AQAAD + V +A + G Y G S E
Sbjct: 5 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVGNFSSKVE 55
Query: 71 EAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV---------- 103
G I+AG N++ ++ GVE D +
Sbjct: 56 ITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAE 115
Query: 104 ---------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130
D++ G+ R+R G+ +D
Sbjct: 116 AIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAAD 175
Query: 131 SLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSE 174
++ Y G V+ T A + T +G T G GV+ +++
Sbjct: 176 RIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDF-AMTD 234
Query: 175 SLVARLEYRAS 185
+++ R EYR S
Sbjct: 235 NVLLRAEYRYS 245
>gi|27379826|ref|NP_771355.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352979|dbj|BAC49980.1| blr4715 [Bradyrhizobium japonicum USDA 110]
Length = 283
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 72/252 (28%), Gaps = 75/252 (29%)
Query: 1 MQKLFLAVGVSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYA 58
M+ V +A+ + +A AAD PT +NG Y
Sbjct: 1 MKNFEKLVLAGVVAVGAAWGTAHAADLA-----------PTYKMPVKAIAPVQTWNGFYV 49
Query: 59 GLSALYNGSFGEE------------------------------AHHNAGGSIFAGYNVE- 87
G + Y+ S G + G + AGYN +
Sbjct: 50 GGNVGYDWSTGSTGISVLSTDPALAAPLAALVAAGSFPTALSPSAKGVIGGVQAGYNWQV 109
Query: 88 DSCIMYGVEGDVRYT--------------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLL 133
+ G+E D + + + G++R R G V+ L
Sbjct: 110 APQWLVGLEADFQGADVKGTTTQALAPVGFDATSTTVSKGIDWFGTVRGRVGVLVAPQWL 169
Query: 134 LYATVGPDVAQKYET----------------GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
LY T G + + +G + + G TAG G EV + +
Sbjct: 170 LYGTGGFAYGRTKSSFSTTDVTGGCIVGATICASGASSGTSTGWTAGAGTEV-MFAPNWS 228
Query: 178 ARLEYRASKYSK 189
+ EY +
Sbjct: 229 FKAEYLYVDLGR 240
>gi|86747693|ref|YP_484189.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas
palustris HaA2]
gi|86570721|gb|ABD05278.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris HaA2]
Length = 661
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 62/171 (36%), Gaps = 29/171 (16%)
Query: 48 PIRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG---SIFAGYN-VEDSCIMY 93
D++G Y G A Y + +F +GG AGYN + + +++
Sbjct: 40 SPAMDWSGFYVGAHAGYVRGHADARLQDPTFAASQSSGSGGVTAGAQAGYNILTRAGVLF 99
Query: 94 GVEGDVRY-----------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
GVE D+ + G+LR R G + L Y T G
Sbjct: 100 GVEADISFPSYLPANAVLSEFDNATSTAQQHIDFYGTLRARLGVA-AGRWLGYVTGGLAY 158
Query: 143 A--QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+ AG++ IG AG G+E G + + AR+EY S +
Sbjct: 159 EHERYLTEPGAGKVLNGRIGWAAGAGLEY-GFTPNWSARIEYLYSDFGNAS 208
>gi|49474419|ref|YP_032461.1| hemin binding protein E [Bartonella quintana str. Toulouse]
gi|21689909|gb|AAM68132.1| hemin-binding protein E [Bartonella quintana]
gi|49239923|emb|CAF26323.1| Hemin binding protein E [Bartonella quintana str. Toulouse]
Length = 299
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 78/302 (25%), Gaps = 112/302 (37%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63
+ S A QAAD + V+P + + G Y G
Sbjct: 6 IIGSVFAFIPASVVQAADVI--VPQQSEQVIPPVIA----SPPFSWTGFYFGGQIGGFSS 59
Query: 64 ------------Y--NGSFGEEAHHN----------------AGGSIFAGYNVEDSC-IM 92
Y N F +E N G + G N+E +
Sbjct: 60 KISAMTSDVASPYVDNLFFPDEESKNKKWVSVEKKYMPELSGFIGGGYTGANLELGNGFI 119
Query: 93 YGVEGDVRYTVPVLADNI------------------------------------------ 110
GVE D+ + +
Sbjct: 120 LGVETDILVSKRKDTKTVVFSDKSDQKITLVEGTKGETDGHTEEDSLGQLIGVSRLKEAE 179
Query: 111 --------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-----------TGKA 151
G+ R+R G+ V ++ Y + G Q +
Sbjct: 180 ENSLTVSHTLKQKWTGATRVRVGFPVE-RMMPYISGGVAYGQFQDIFSMSITGEDADFTT 238
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGM 203
+ T IG T G GV+ +++ + R EYR S + K + N +GV
Sbjct: 239 VDDTKAMIGYTLGGGVDF-AMTDHFIVRAEYRYSDFGKKKFQERIELNYKTNDFRVGVAY 297
Query: 204 KF 205
KF
Sbjct: 298 KF 299
>gi|156739568|gb|ABU93444.1| Omp25 [Brucella melitensis]
gi|156739602|gb|ABU93461.1| Omp25 [Brucella suis]
Length = 66
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
+ G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 LEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 59
Query: 170 GGLSESLV 177
L+++++
Sbjct: 60 -KLTDNIL 66
>gi|15420170|gb|AAK97307.1|AF308165_1 Pap31 [Bartonella henselae phage 60457]
Length = 243
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 86/251 (34%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
S +AL S +AQAAD + V +A + G Y G S E
Sbjct: 3 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVGNFSSKVE 53
Query: 71 EAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV---------- 103
G I+AG N++ ++ GVE D +
Sbjct: 54 ITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAE 113
Query: 104 ---------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130
D++ G+ R+R G+ +D
Sbjct: 114 AIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAAD 173
Query: 131 SLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSE 174
++ Y G V+ T A + T +G T G GV+ +++
Sbjct: 174 RIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDF-AMTD 232
Query: 175 SLVARLEYRAS 185
+++ R EYR S
Sbjct: 233 NVLLRAEYRYS 243
>gi|260466904|ref|ZP_05813087.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259029300|gb|EEW30593.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 238
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 73/209 (34%), Gaps = 56/209 (26%)
Query: 51 HDFNGPYAGLSALYNG-------SFGEEAHHNAG---------GSIFAGYNVEDSC-IMY 93
++++G Y G A Y +F + + G G ++AG N + ++
Sbjct: 32 YNWSGAYIGAQAGYAWANARVGQTFAPGSFDDYGWGYNPSGGFGGLYAGVNHQFDSGLVL 91
Query: 94 GVEGDVRYTVPVLAD------------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
G+E D + GSLR+R GY V D L + T G
Sbjct: 92 GIEADYSFAGVKDTTHYRALGVDDPAFGGELKLDTVGSLRLRAGYAV-DRWLPFVTGGLA 150
Query: 142 VAQKY-------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK----- 189
VA + ++ G T G G E ++++ + R EYR + + +
Sbjct: 151 VASYKHTTVNLPGSTPYADVKGTVAGYTLGAGAEY-AVTDNWLVRGEYRFADFGRHTSVR 209
Query: 190 -------------VEGFYNTISLGVGMKF 205
V+ + + +GV KF
Sbjct: 210 HSLVNGAPLNPDAVDLTTHDLRIGVAYKF 238
>gi|154244432|ref|YP_001415390.1| porin [Xanthobacter autotrophicus Py2]
gi|154158517|gb|ABS65733.1| porin [Xanthobacter autotrophicus Py2]
Length = 283
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 68/249 (27%), Gaps = 77/249 (30%)
Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------- 69
F + AA V + + P + G Y G +A Y + G
Sbjct: 5 FVAVFAA-SVMSGAACAADLAVAVTKAPPAPASFSWTGFYIGGNAGYAWNSGTLDGVGYI 63
Query: 70 -----------------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD---- 108
++ G AGYN + + G E D+ Y
Sbjct: 64 YGSDYGSYSNGWFNGQRSSESNSFTGGAQAGYNYQIGRAVLGFEADINYADASKTYAASS 123
Query: 109 ----------------------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
+ + G++R R G D LL+YAT G +
Sbjct: 124 TYDLYPYPVDRPDYNYHLREQLDASASVEWFGTIRARLGVTALDRLLVYATGGAAYGKVS 183
Query: 147 ET------------------------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+ G G + + G T G G+E +++++ + EY
Sbjct: 184 GSGSYSWREYGFWWGGPGDHAFDRSGGFGGTDSSVRWGWTVGGGLEY-AITDNITVKGEY 242
Query: 183 RASKYSKVE 191
+
Sbjct: 243 LYVDLGSND 251
>gi|27383307|ref|NP_774836.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27356481|dbj|BAC53461.1| bll8196 [Bradyrhizobium japonicum USDA 110]
Length = 278
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 69/249 (27%), Gaps = 69/249 (27%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
++L LA ++ +A + AAD P + V + G Y G S
Sbjct: 5 KQLSLASIIAFGTIAFGSGSLAADLP---------AAPVVKAPAPVYPLFSWTGGYIGGS 55
Query: 62 ALYNGSFGEE----------------------------------AHHNAGGSIFAGYNVE 87
+ + G + AGYN +
Sbjct: 56 VGSGWGTSQTDLAVGNTFIGAPVNQTVNQLIGGTADLNVPLPQVQLNGFLGGVQAGYNFQ 115
Query: 88 DSCIMYGVEGDVRYTVPVLAD------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
++YGVE D ++ N + + R G V D L+Y G
Sbjct: 116 SGVMVYGVESDFLWSGIKGRTGCFVVLNCTNDTKWIADITGRVGVTVGDRGLVYIKGGAA 175
Query: 142 VAQKYE-------------------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
A G T GGT G G+E L A++EY
Sbjct: 176 WADSSIGINQSFAVTSNLGAGFAANGAADGRATKNIFGGTLGAGIEYAFL-PGWSAKVEY 234
Query: 183 RASKYSKVE 191
+ + +
Sbjct: 235 DYFDFGRQD 243
>gi|75674443|ref|YP_316864.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419313|gb|ABA03512.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 241
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 75/227 (33%), Gaps = 38/227 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ LA V+ L +A+ AQAAD R + VP +++ G Y G
Sbjct: 18 MKKILLA-SVAFLGMAAIVPAQAADLAPRPYTKAPPYVPA--------PIYNWTGFYLGG 68
Query: 61 SALYNG---------SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNI 110
F G GY+ + ++G+E L
Sbjct: 69 HIGGAFGGPGNVLAPGFFNNNDGAFMGGGQVGYDTQFSPNWVFGIEA----NYSFLDTGS 124
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
+ GS+ R GY LLY G A T G T G G+E
Sbjct: 125 FFANRGLGSVTARLGYTW-GPALLYVKGGYGWADSRFTNGF-AGNGGRDGYTVGGGLEYL 182
Query: 171 GLSESLVARLEYRASKYSKV------------EGFYNTISLGVGMKF 205
+++ ++EY+ V +T+ +G+ +F
Sbjct: 183 -FTQNWSGKVEYQYYDLGNVNFFGPLGGIGNFRNDQHTVKVGLNYRF 228
>gi|158425350|ref|YP_001526642.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332239|dbj|BAF89724.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 233
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 71/196 (36%), Gaps = 43/196 (21%)
Query: 51 HDFNGPYAGLSALYNGS----------FGEEAHHNAG--GSIFAGYNVED-SCIMYGVEG 97
+ G Y G +A + G FG +++G GYN + + ++ G+E
Sbjct: 40 FSWTGFYIGANAGFGGDKYNYDFGAPGFGSATANSSGFFAGGQLGYNYQFANNVVLGLET 99
Query: 98 DVRYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-- 146
D++++ N++S G++R R GY D L Y T G +
Sbjct: 100 DIQWSGIEGDTTLASGGSVANLNSSLDYFGTVRARVGYAF-DRFLPYITGGFAYGESKTS 158
Query: 147 ------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------K 189
T GE + G T G GVE + + + EY
Sbjct: 159 ITTITPTTLTFGEGSGTKTGWTLGGGVEY-AFTNNWTFKTEYLYVDLDDSNYGVGAGAVN 217
Query: 190 VEGFYNTISLGVGMKF 205
V+ ++T+ G+ KF
Sbjct: 218 VDNKFHTVKAGINYKF 233
>gi|121602037|ref|YP_989465.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614214|gb|ABM44815.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 284
Score = 85.1 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 79/290 (27%), Gaps = 91/290 (31%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ +L+V + L S AAD V +++ + P + G Y G
Sbjct: 1 MKMRYLSVLFG-ITLGSSSVVNAADVVVINKTEEEA---PASSSVFTPADLSWTGVYLGG 56
Query: 61 SAL----------YNGSFGEEAHH-------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
Y+ + G ++ G N++ + GVE D ++
Sbjct: 57 QISGFSSKVDIDRYSDNTWSSVEKSLLPEISGFSGGLYVGSNIDLGEGFILGVETDALWS 116
Query: 103 VPVLADNIHSL------------------------------------------------H 114
+ +
Sbjct: 117 NTGDKKTLPTKKVGAAHRLEAAERNREDEVVQERRVAAANNSAKAPEANVRMTGEYALRQ 176
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAG 164
G+ R R G+ V + Y T G Q + + + +G G
Sbjct: 177 QWIGATRARVGFAVE-RFMPYVTGGLAYGQLRGVNLLALATNNTENSEKEEKLMVGYAVG 235
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205
G++ +S ++ R EYR S K + N +GV KF
Sbjct: 236 AGLDF-AVSSNIFLRTEYRFSDLGKKKFANEKIEVNYKINDFRVGVAYKF 284
>gi|163869043|ref|YP_001610277.1| hemin binding protein [Bartonella tribocorum CIP 105476]
gi|161018724|emb|CAK02282.1| hemin binding protein [Bartonella tribocorum CIP 105476]
Length = 296
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 81/299 (27%), Gaps = 97/299 (32%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRY----VPIRHDFNGP 56
M+ +S + +AQAAD V P+ ++R V ++G
Sbjct: 1 MKT-KCLFVLSLFTFMTTSTAQAADTVISQQSQPSVSAPSSLSSRLSPVTVSAPFSWSGF 59
Query: 57 YAGLSALYNGSFG--------------------EEAHHNAGGSIFAGYNVEDSC-IMYGV 95
Y G + S +AG N++ ++
Sbjct: 60 YFGGQLGHLSSKSTLNYAPESQGGKWALVDRGLSPKPTGFVAGFYAGSNIDLGNSLVVSF 119
Query: 96 EGDVRYTVPVLADNIHSL------------------------------------------ 113
+ D+ ++ +
Sbjct: 120 DTDMIWSGKKNTQTDNGKKILDKLDSVHAAFHDAGIPIITSEVQDETIPNYSDIIVSSVT 179
Query: 114 --HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----------------KYETGKAGEIT 155
G+ R R G+ S L+ Y G Q + +G + T
Sbjct: 180 LKEKWAGAARARIGFA-SHRLMPYIAGGVAYTQMQYILSLLTKSQEDSTVFASGDVFDKT 238
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKY---------SKVEGFYNTISLGVGMKF 205
IG T G G + +++ ++ R EYR + + K+ + LG+ KF
Sbjct: 239 KTMIGYTVGGGFD-LAMTDDIIMRTEYRYTDFFKQKFANDELKMSVQTHNFRLGIAYKF 296
>gi|83956056|ref|ZP_00964538.1| outer membrane protein [Sulfitobacter sp. NAS-14.1]
gi|83839622|gb|EAP78801.1| outer membrane protein [Sulfitobacter sp. NAS-14.1]
Length = 199
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 33/193 (17%)
Query: 45 RYVPIRHDFNGPYAGLSALY-----------------NGSFGEEAH-HNAGGSIFAGYNV 86
+ G Y G + Y NG + ++ AGY+
Sbjct: 8 AEQAPAPAWTGGYVGGNISYGFGSLDANDDLASALTTNGFSDNLSEPDGVSAALRAGYDW 67
Query: 87 EDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYATVG 139
+ ++G+ + + + + I + G+ ++ RGGY V D+ L Y +G
Sbjct: 68 QFGRGVFGLGAEYNFGSYDGDGEGILAGSGVDVEIQDMATIFARGGYLVKDNFLAYGLLG 127
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----- 194
A+ + + G T G G E +++ EY + + V+
Sbjct: 128 YSQAEGEVSLGGDSESEDLDGVTIGFGGEY-MFTQNWTGYAEYTYTDFGDVDNTDGQLEA 186
Query: 195 --NTISLGVGMKF 205
I GV +F
Sbjct: 187 DLQQIKFGVNYRF 199
>gi|91977250|ref|YP_569909.1| hypothetical protein RPD_2780 [Rhodopseudomonas palustris BisB5]
gi|91683706|gb|ABE40008.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 570
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 71/220 (32%), Gaps = 55/220 (25%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
+S++ AS +A AAD R P A ++ G Y G G
Sbjct: 8 LSAVLFASCGTAHAADIAR----------PPAADPI---AALNWTGFYLGAHLG-AGFGT 53
Query: 70 EEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------------VRY 101
+ + G SI+ AGYN + + GVE D + Y
Sbjct: 54 TKVDNPYGPSIYGDTVRVPKALAGLQAGYNWQAPGTAWVLGVEADASALDADGTDTCLAY 113
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV----------AQKYETG 149
+ ++ N + G+L R G+ L+Y G A Y
Sbjct: 114 SGQFVSANCRVREHVLGTLTGRIGHAFGSQGRSLMYVKGGAAFLTSDLTMTTNAVDYLNR 173
Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
A E+ G T G G+E LS R EY + +
Sbjct: 174 PAAELKETRWGWTVGAGIE-HALSSGWAVRAEYDYADFGT 212
>gi|296445473|ref|ZP_06887430.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296257039|gb|EFH04109.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 210
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 25/174 (14%)
Query: 50 RHDFNGPYAGLSALY-----NGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTV 103
+ G Y GL+A NG G+ + GG I GYN++ + G+E D + T
Sbjct: 41 VFSWTGAYVGLNAGGAFKADNGLGGDYSGVVGGGQI--GYNLQLSPLFVVGLETDFQGTS 98
Query: 104 PVLAD--NIHSLHGIGGSLRIRGGYEVSDS-LLLYATVGPDVAQKYETGKAGEITPIAIG 160
G++R R G + DS LL Y T G + A + G
Sbjct: 99 LSRNTWFGQQVSLPWFGTVRGRVGVTLFDSQLLAYGTGGFAYGEVK----APWSSDTHTG 154
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEG---------FYNTISLGVGMKF 205
TAG GVE L + A++EY + G ++T+ GV F
Sbjct: 155 WTAGGGVEWAFL-PNWSAKVEYLYTDLQNNSGWGWVAPQRAKFHTVRAGVNYHF 207
>gi|319406584|emb|CBI80226.1| Hemin binding protein C [Bartonella sp. 1-1C]
Length = 304
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 84/315 (26%), Gaps = 121/315 (38%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M + + S +AL + +AQAAD G V V + G Y G
Sbjct: 1 MNNMKCLITASVVALMTASAAQAADIKVPQEIGETIV---------VAPAFSWTGFYLGG 51
Query: 61 SALYNGSFGEEAH--------------------HNAGGSIFAGYNVEDSC-IMYGVEG-- 97
S + G +AG NV+ ++ GV+
Sbjct: 52 QIGGFSSKTSFSSLADGDSKKWFPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDV 111
Query: 98 -------------------DVRYTVPVLADNIHS-------------------------- 112
D VP A + +
Sbjct: 112 VFSGRKDTRNDTMTSELGKDKNNNVPTGAKDNGNPKPEKEPGKEPGKEPEKEPEKESDVK 171
Query: 113 --------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE----------------- 147
G+ R+R G+ +D ++ Y G Q +
Sbjct: 172 FTKYDHTLKAKWAGATRVRIGFA-ADRIMPYVAGGVAYTQLQDTFTTLTGIQKIPVQKAD 230
Query: 148 --------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----- 194
+ + IG T GV+ ++++++ R EYR S + K +
Sbjct: 231 GKDEETSGKSNTVDESKTMIGYTLAAGVDF-AMTDNVLLRAEYRYSDFGKKKLHNDKFEV 289
Query: 195 ----NTISLGVGMKF 205
N +GV KF
Sbjct: 290 NYKANDFRVGVAYKF 304
>gi|156739550|gb|ABU93435.1| Omp25 [Brucella abortus]
gi|156739554|gb|ABU93437.1| Omp25 [Brucella abortus]
gi|156739570|gb|ABU93445.1| Omp25 [Brucella melitensis]
Length = 65
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 58
Query: 171 GLSESLV 177
L+++++
Sbjct: 59 KLTDNIL 65
>gi|192288904|ref|YP_001989509.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
gi|192282653|gb|ACE99033.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
Length = 689
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 29/170 (17%)
Query: 49 IRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG---SIFAGYNVEDS-CIMYG 94
+D++G Y G A Y + + + + AGG AGYN ++ G
Sbjct: 66 PAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLLG 125
Query: 95 VEGDVRY-----------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV- 142
VE D+ + N G++R R G ++ L Y T G
Sbjct: 126 VEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGV-IAGRWLGYVTGGLAFE 184
Query: 143 -AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+ AG + IG AG GVE G + + R+EY S+Y
Sbjct: 185 HERYLTDPDAGRVMNARIGWAAGAGVEY-GFAPNWSVRIEYLYSQYQNAS 233
>gi|307946127|ref|ZP_07661462.1| putative outer membrane protein [Roseibium sp. TrichSKD4]
gi|307769791|gb|EFO29017.1| putative outer membrane protein [Roseibium sp. TrichSKD4]
Length = 256
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 26/193 (13%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ + ++ A+AAD V P + + V + G Y G A + +
Sbjct: 44 LVMCAVLGGLVAGAKAAD----MPVYDDFVTPNLPSAGSV-----WEGGYVGAEAGLSQT 94
Query: 68 FGEE---------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN------IHS 112
E + +A +F GYN + S ++ GVE Y N + +
Sbjct: 95 LTESKVPGAKSTASKMDAAFGLFGGYNWQVSRVVLGVEAGATYLGGQAKKNLSGVGQVKA 154
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGL 172
SLR R G S + Y T G + + +G G G+EV +
Sbjct: 155 GSQWSASLRGRVGLPFE-SFMPYLTAGLAATDHSTKANGKTHSALGVGLMFGGGLEV-AV 212
Query: 173 SESLVARLEYRAS 185
SE+ R +Y +
Sbjct: 213 SENWRVRADYSMT 225
>gi|319408966|emb|CBI82625.1| Hemin binding protein E [Bartonella schoenbuchensis R1]
Length = 303
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 24/115 (20%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPD-------------VAQKYETGKAGEITPIAI 159
G+ RIR G+ +D ++ Y G E + T I
Sbjct: 191 NQKWTGATRIRIGFA-ADRIMPYIAGGVAYGQFQNILSLSSTATHDKELNNMSDETKTMI 249
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL---------GVGMKF 205
G T G G++ +++ ++ R EYR S + K + ++ L GV KF
Sbjct: 250 GYTFGAGIDF-AMTDDIILRAEYRYSDFGKKKFAKDSFELHYKTNDFRAGVSYKF 303
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ S LA+ QAAD + + GV P + P +NG Y G
Sbjct: 4 KCLIATSIFTLAAISLVQAADSIVFKENYKMGVSPIVR-----PPTFSWNGFYIGGQVG 57
>gi|240849918|ref|YP_002971307.1| hemin binding protein B [Bartonella grahamii as4aup]
gi|240267041|gb|ACS50629.1| hemin binding protein B [Bartonella grahamii as4aup]
Length = 582
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 75/272 (27%)
Query: 7 AVGVSSLALASFCSAQAADPVRR---AHHGGRGVVPTIA--------TNRYVPIRHDFNG 55
+ SS+ + A A + VP+ ++ + +G
Sbjct: 313 TLVKSSVTAPAVQPAAKAPTSVQSASQPSTAEKTVPSAPLVLARSGSSSEPAKASNGTSG 372
Query: 56 PYAGLSALYNGSFGEE-----------------------AHHNAGGSIFAGYNVEDSCIM 92
G +GS + A + GG AG+ + + +
Sbjct: 373 AQNGAHHGAHGSGSDANPHGASHGGGHGSGAHAHGANPHASRSHGGQNMAGHGAQSTQAV 432
Query: 93 -------YGVE------GDVRYTVPVLADNIHS--LHGIGGSLRIRGGYEVSDSLLLYAT 137
YG+E ++ + ++ GG+ R+R G+ +D + Y
Sbjct: 433 DKNNSSVYGIEQMKRVASELGLDQEDEVETLNHTFKQNWGGATRVRIGFA-ADRFMPYLA 491
Query: 138 VGPDVA---------------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
G + + + T IG T G GV+ L ++++ R EY
Sbjct: 492 GGIAYGQFQDTISISVKDEDGRVVSSKNLADETKTMIGYTLGGGVDFSVL-DNVIVRAEY 550
Query: 183 RASKYS---------KVEGFYNTISLGVGMKF 205
R S + +V N +GV KF
Sbjct: 551 RYSDFGKKKFAKEKFEVNYKTNDFRVGVAYKF 582
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 30/135 (22%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ S +L S +A AAD + ++ V + G Y G+ A G
Sbjct: 6 LITASIFSLISTSTALAADVM------IPHQPAPSTSSAIVAPTFSWTGLYLGVQA---G 56
Query: 67 SFGEEAH--------------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPV 105
F ++ G +AG N++ ++GV+ D+ +
Sbjct: 57 GFSSKSDMALVDQEKNLPLDKEFSPKLSGFVGGFYAGSNIDLGDNFIFGVDTDLMISGKK 116
Query: 106 LADNIHSLHGIGGSL 120
I ++
Sbjct: 117 HTKTITIGAADNTTV 131
>gi|296446453|ref|ZP_06888397.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256088|gb|EFH03171.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 210
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 63/194 (32%), Gaps = 28/194 (14%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K A+ + + LA +AAD P + ++G YAGL
Sbjct: 1 MRKTVSALASTFVLLAG--DVRAADL-----------PPQATVFGGARPAYAWSGVYAGL 47
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHS----LHG 115
+ S G GYN + G+E D + T +
Sbjct: 48 NLGAGLSASGLDRSGILGGGQLGYNYRLGPLFVVGLETDFQGTSLGGDSGRYGFPSPRFD 107
Query: 116 IGGSLRIRGGY-EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ R R G SD LL + T G + + G TAG G+E +
Sbjct: 108 WFGTARGRVGVLPFSDHLLFFGTGGYAYGH--------DGDRMHDGWTAGGGLEWAFARD 159
Query: 175 SLVARLEYRASKYS 188
+ EY + +
Sbjct: 160 -WSVKAEYLYTDFG 172
>gi|86751713|ref|YP_488209.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86574741|gb|ABD09298.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 449
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 46/175 (26%), Gaps = 30/175 (17%)
Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAH------------HNAGGSIFAGYNVEDSCIMYG 94
P ++ G Y G + + G GYN + S ++G
Sbjct: 242 TPPPANWAGLYLGGNFGGATARNRTTSSVIFSENFNLSPDGFVGGGQIGYNWQASNWVFG 301
Query: 95 VEGDVRYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
E D + + + G+ R R GY V S L YAT G
Sbjct: 302 AEADFQGSTQKDDRAAVLSSLLLYNQKLPWFGTARARLGYTV-GSTLFYATGGYAYGNVK 360
Query: 147 ETGKAGEITPIAI----GGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG 192
G G GVE L + ++ EY
Sbjct: 361 TNVVTAFSNETFNRSRSGYAVGAGVETPFQLFGLLGPNWTSKTEYLYVDLGSTTD 415
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 70/216 (32%), Gaps = 46/216 (21%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ V + S SAQAAD +A + + +D+ G Y G +
Sbjct: 4 ILVGVALIGSAVSAQAADLAVKAPYLK----------APIAAVYDWTGFYIGANVGVGLG 53
Query: 68 FGEEAHHNAGGSI-------------FAGYNVED-----SCIMYGVEGDVRYTV------ 103
+ H G + GYN + ++ GVE D++ +
Sbjct: 54 RDLQTHAVPAGGVASHLSPQGVIGGGQIGYNWQSNTTFLGPLLIGVEADIQGSGMTDGHT 113
Query: 104 ----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--ETGKAG----E 153
P+ A N + ++R R G V ++ Y T G A T G
Sbjct: 114 TLSSPLGAANYNQKLDWFTTVRGRVGL-VRGPVVGYFTGGFAAANVKTTVTQIGGIVPFA 172
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ G T G GVE + + ++EY
Sbjct: 173 FSETRTGWTIGSGVEA-AIGGNWTGKIEYLYLDLGN 207
>gi|300024536|ref|YP_003757147.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526357|gb|ADJ24826.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 232
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 63/194 (32%), Gaps = 37/194 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH-------------------NAGGSIF 81
A + + GPY G +
Sbjct: 13 AAATPVLAGEPSWTGPYIGAHVGGAWGNASTTDDPRDWGNDPKFIGPFDQNPVGVIAGLT 72
Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH-----------GIGGSLRIRGGYEVSD 130
AGYNV+ S I+ GVEGD+ Y A + S GI G++ R G+ +
Sbjct: 73 AGYNVQLSNIVLGVEGDIGYLGLDSALDTPSSQSGNHQSIVLDSGIYGAVTARAGFLATP 132
Query: 131 SLLLYATVGPDVAQKYETGKAGEI------TPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
S L+Y G T T G AG G+E L+++L ++EY
Sbjct: 133 STLVYGKGGFAFYNGDATQSTTADGYVFHGTGTFTGWVAGGGIE-QRLTDNLSIKVEYLH 191
Query: 185 SKYSKVEGFYNTIS 198
+ G +IS
Sbjct: 192 FDFGSQAGDQTSIS 205
>gi|316934003|ref|YP_004108985.1| porin [Rhodopseudomonas palustris DX-1]
gi|315601717|gb|ADU44252.1| porin [Rhodopseudomonas palustris DX-1]
Length = 578
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 68/223 (30%), Gaps = 55/223 (24%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
++ S LA+ C A AAD R ++ G Y G G
Sbjct: 16 SIICVSAVLAASCGAHAADLPR-------------PPAAKAVAVWNWTGFYLGAHLG-AG 61
Query: 67 SFGEEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------------ 98
+ + G SI+ AGY + + GVE D
Sbjct: 62 FGTAKVDNPFGASIYGDTVRAPKALAGLQAGYTWQAPGSAWVLGVEVDASAIDADGTDTC 121
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV----------AQKY 146
+ Y+ ++ N + G+L R G+ LLY G A Y
Sbjct: 122 LAYSGQFVSANCRIREHVLGTLTGRLGHAFGAQGRSLLYVKGGGAFLIGNLTMTTNASDY 181
Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
E+ G T G G+E L+ R EY + + +
Sbjct: 182 LAQPGAELNATRWGWTVGAGIE-HALTPRWSVRAEYDYANFGR 223
>gi|156739548|gb|ABU93434.1| Omp25 [Brucella abortus]
gi|156739556|gb|ABU93438.1| Omp25 [Brucella abortus]
gi|156739560|gb|ABU93440.1| Omp25 [Brucella melitensis]
gi|156739564|gb|ABU93442.1| Omp25 [Brucella melitensis]
gi|156739578|gb|ABU93449.1| Omp25 [Brucella melitensis]
gi|156739582|gb|ABU93451.1| Omp25 [Brucella melitensis]
gi|156739584|gb|ABU93452.1| Omp25 [Brucella melitensis]
gi|156739588|gb|ABU93454.1| Omp25 [Brucella melitensis]
gi|156739592|gb|ABU93456.1| Omp25 [Brucella suis]
gi|156739598|gb|ABU93459.1| Omp25 [Brucella suis]
gi|156739620|gb|ABU93470.1| Omp25 [Brucella pinnipedialis]
gi|156739622|gb|ABU93471.1| Omp25 [Brucella pinnipedialis]
gi|156739624|gb|ABU93472.1| Omp25 [Brucella pinnipedialis]
gi|156739626|gb|ABU93473.1| Omp25 [Brucella pinnipedialis]
Length = 64
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 VKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58
Query: 172 LSESLV 177
L+++++
Sbjct: 59 LTDNIL 64
>gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 212
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 26/220 (11%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
++ A + +A SA AAD + + V HD++G Y G
Sbjct: 3 KRSITAAAFGTAVMAFAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQ 54
Query: 62 ALYNGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGI 116
+ S + A G I G N+++ I++G EG+ +
Sbjct: 55 VGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSW 114
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
G+ + + GY D L+Y T G V + G G GVE LS L
Sbjct: 115 NGNAKGKVGYAF-DKTLVYGTAGYGVTRFKAKENTTSAPGWEGGVLIGAGVE-QALSGPL 172
Query: 177 VARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
+ EY +++ V+ ++I G+ +F
Sbjct: 173 SVKAEYDFQRFNDVKSQVNGIEQRNNLKNHSIKAGLNYRF 212
>gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840]
gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis]
gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840]
Length = 212
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + R + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGRTDYTYNDPVAAGP--------HDWSGNYVGTQVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 222
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 79
Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G E G+ + G+ + + GY D
Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 138
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + + G G GVE LS L + EY +++ V+
Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSASGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 198 SQVNGIEQRNNLKNHSIKAGLNYKF 222
>gi|254470977|ref|ZP_05084380.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062]
gi|211960119|gb|EEA95316.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062]
Length = 228
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 29/184 (15%)
Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYNVEDSCIMYGVEGDV 99
P +D++G Y G+ + G +N+G ++ GYN I+ GVEG+
Sbjct: 49 TPPEYDWDGFYLGVQGGWARLHGTNRFNNSGSQYNGGTVGLYGGYNYTYQNILIGVEGEG 108
Query: 100 RY--TVPVLADNIHSLHGIGGSLRIRGG--YEVSDSLLLYATVGPDVAQKYETGKA---G 152
Y + + +IR G Y+ + Y T G V+ + G
Sbjct: 109 AYWAFGERSRGEMSLRSDYFAAAKIRAGLTYDW---FMAYVTGGAAVSTFRASNPNFGPG 165
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGV 201
+ +G G G+E ++E ++ RL+Y + K + + I LGV
Sbjct: 166 TDSNTMLGWVGGAGLE-MFVTERIIVRLDYERIVFPGRSFTVGGTRFKEDIDSDAIRLGV 224
Query: 202 GMKF 205
KF
Sbjct: 225 SYKF 228
>gi|39935611|ref|NP_947887.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39649464|emb|CAE27986.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 997
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 74/225 (32%), Gaps = 46/225 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + V S+ + SA AAD +A VP ++ G Y G
Sbjct: 1 MKNFPAWLSVWSVVAVACGSAHAADLQN------------VAVPSAVPAATNWTGFYIGT 48
Query: 61 SALYNGS-------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
S G NA I GYN + + G+EGD +
Sbjct: 49 HVGAAASESAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQFGNYVLGIEGDASF 108
Query: 102 -TVPVLADNIHSLHGIGG------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-- 152
++ LA +H +L R GY D LL+Y G A + +G
Sbjct: 109 GSINGLARCLHGTFACTSRIDELWTLAARFGYAAGD-LLVYGKAGAAWADVHRRMASGNF 167
Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
E + G G GVE L L A++EY + +
Sbjct: 168 VNVLEASETRSGWLLGAGVEYAFL-PGLSAKIEYNYADFGNRSLT 211
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 36/181 (19%)
Query: 52 DFNGPYAGLSALYNGSFGEEAH----------HNAGGSIFAGY---NVEDSCIMYGVEGD 98
++ G Y G S A + GG++ G N + ++ GVE
Sbjct: 785 NWTGLYVGASVGAGWGRTTYADPFPTPTTGDRADLGGALLGGQIGANYQFGHLVAGVEAS 844
Query: 99 VRYTVPVLADNIHSLH------GIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQ 144
+ D + G G+ RGGY + D LLY G +
Sbjct: 845 ANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAIGAFTARGGYAI-DRTLLYVKGGAAWDR 903
Query: 145 KYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197
+ + G T G T G G+E L+ S LEY+ + F ++
Sbjct: 904 QQDQFNTVGVGGTTLASTSTNWGWTVGGGLEY-ALAPSWSMALEYKYFDFGASPAFSTSV 962
Query: 198 S 198
+
Sbjct: 963 T 963
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 66/217 (30%), Gaps = 49/217 (22%)
Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA----------- 82
G V + + G Y G+ A G FG +A G++ A
Sbjct: 240 GAASVSAAPLPGVPLPQWSWTGIYLGVHAG--GGFGSNDWDSATGALLAASTSGGFPGRG 297
Query: 83 -----------GYNVEDSCIMYGVEGDV------RYTVPVLADNI------HSLHGIGGS 119
G N + + GVE Y H+ G+
Sbjct: 298 DSSGLFGGGQIGANYQFGRWVAGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGT 357
Query: 120 LRIRGGYEVSDSLLLYATVGPD-VAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLS 173
+ R G + LL+Y G + +AG + G G G+E LS
Sbjct: 358 ITGRLGQTWGN-LLIYGKAGAAWATGSSDAQRAGSASRFTESGTRWGWVTGTGLEY-ALS 415
Query: 174 ESLVARLEYRASKYSK-----VEGFYNTISLGVGMKF 205
+L A +EY + V+ F N +G KF
Sbjct: 416 PNLSAFVEYNHVDFGTQDTAYVDQFGNASEVGFKQKF 452
>gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457]
gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457]
gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90]
Length = 212
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G E G+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|261317611|ref|ZP_05956808.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94]
gi|265988645|ref|ZP_06101202.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1]
gi|261296834|gb|EEY00331.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94]
gi|264660842|gb|EEZ31103.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1]
Length = 134
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 25/123 (20%)
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPI 157
L + S G++R R G + D + Y G +
Sbjct: 14 LTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKT 72
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTISLGVG 202
G AG GV+ +++++ RLEYR + Y + + I LGV
Sbjct: 73 MTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVA 131
Query: 203 MKF 205
KF
Sbjct: 132 YKF 134
>gi|323136250|ref|ZP_08071332.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
gi|322398324|gb|EFY00844.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
Length = 226
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 71/206 (34%), Gaps = 23/206 (11%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-GS 67
+ +A AA P A P P ++G Y G+ Y S
Sbjct: 1 MKNKVAALLAPFVLAAGPSLSADLPRGAAPPPGDYVAP-PPAFVWSGFYVGVHGGYAFSS 59
Query: 68 FGEEAHHNAGG------SIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIGG-- 118
F ++A+ GG + GYN + GVE D +T ++ G
Sbjct: 60 FEDDANTLIGGADGGLIGVTGGYNYMVTPQFLLGVEADFAFTGVSKSNAPFFGVIARGEV 119
Query: 119 ----SLRIRGGYEVSDSLLLYATVGPDVAQKYE------TGKAGEITPIAIGGTAGVGVE 168
+LR R GY + D LLY T G ++ TG G G G GVE
Sbjct: 120 DDMFTLRGRAGYSI-DRALLYVTGGFAASKNAIGLTTPFTGFYGYQATFQPGWALGAGVE 178
Query: 169 VGGLSESLVARLEYRASKYSKVEGFY 194
++ +L A+ EY + F
Sbjct: 179 Y-MITSNLSAKGEYIFTSTGSDSYFD 203
>gi|121602149|ref|YP_989467.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614326|gb|ABM44927.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 281
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 87/283 (30%), Gaps = 80/283 (28%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M K + + + +A++S QAAD V + + A + + G Y G+
Sbjct: 1 MNKKNVLLSLCVVAVSSPSLVQAADTVVVSRAVSKTQTAQNAMSVVDHSDLSWGGLYFGV 60
Query: 61 S-ALYNGSF--------GEEAHH--------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102
+G+ GE+ G + G NVE ++ GV+ DV ++
Sbjct: 61 QVGGISGNLSLNRKAVSGEDKSSSETLPKLSGFIGGFYLGSNVEFGGGLVVGVDTDVVWS 120
Query: 103 -------------------------------------VPVLADNIHSLHGIGGSLRIRGG 125
+A N+ G+ RIR G
Sbjct: 121 NQKYKQLSDPIHVDEEVLKLHQALMSDYGHNSNSLKIGDKIAYNVTRKTNWIGATRIRFG 180
Query: 126 YEVSDSLLLYATVGPDVAQKYETG--------------KAGEITPIAIGGTAGVGVEVGG 171
+ ++ Y G Q T +G T G G E
Sbjct: 181 LA-GERMMPYVAGGIAYTQLQVTPWFEVTPTKGEVSSIDFMNDKKTMVGYTLGAGFEFLM 239
Query: 172 LSESLVARLEYRASKYS---------KVEGFYNTISLGVGMKF 205
++ ++ R EYR S + KV N + +GV KF
Sbjct: 240 -TDDVILRTEYRHSDFGKKNFLKDTSKVSYKTNDVRIGVAYKF 281
>gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
Length = 212
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGGTDYTYYDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G E G+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|148258633|ref|YP_001243218.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|146410806|gb|ABQ39312.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1]
Length = 710
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 66/192 (34%), Gaps = 25/192 (13%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF-GEEAH----- 73
A A R + + +D+ G Y G Y G G+++H
Sbjct: 59 PAGADRLGTERRLDVRTKADRPPSEAEMKRVYDWTGFYVGGHFGYGGGRLGDDSHPKPEQ 118
Query: 74 --------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI-----HSLHGIGGS 119
G GYN + + ++ GVE D +T P + +S G+
Sbjct: 119 GVFLPHSPTGLIGGFQVGYNRQLANHLVLGVEADASFTSPTDEPALAPSPFNSTVDYVGT 178
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI---AIGGTAGVGVEVGGLSESL 176
R R GY D + Y T G + G + G TAG+G E +S +
Sbjct: 179 ARGRVGYAF-DRWMPYVTGGFAWGHGHIEVNDGSGAQLGRYQTGWTAGLGAEF-AVSGNW 236
Query: 177 VARLEYRASKYS 188
A++EY S
Sbjct: 237 TAKVEYDYVNLS 248
>gi|156739526|gb|ABU93423.1| Omp25 [Brucella neotomae]
gi|156739608|gb|ABU93464.1| Omp25 [Brucella ovis]
Length = 63
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 VKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58
Query: 172 LSESL 176
L++++
Sbjct: 59 LTDNI 63
>gi|92116045|ref|YP_575774.1| carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14]
gi|91798939|gb|ABE61314.1| Carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14]
Length = 692
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 82/218 (37%), Gaps = 43/218 (19%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY----- 57
+ V +S+LAL SA AAD G ++PT A R D+ G Y
Sbjct: 36 VVLAGVALSALALGG--SAVAADV-------GASLLPTKAMPR---PVIDWTGLYFGAHA 83
Query: 58 -------AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADN 109
+ G + + AGYN++ ++ G+E D+ + + +++
Sbjct: 84 GFGGGRSTATLVDPASTTGRNDYGGIISGVQAGYNIQLPSGLLLGLEADISFPNYIESNS 143
Query: 110 IHSL-----------HGIGGSLRIRGGYEVSDSLLLYATVGPD-VAQKYETG-KAGEITP 156
S GS R R GY + L YA+ G ++Y +G+
Sbjct: 144 DVSKLATARSAVTQQWDFIGSARGRIGYA-TGPWLTYASGGLAFAGERYLNDLPSGDQEK 202
Query: 157 IA---IGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+G AG G+E + S ARLEY ++ K
Sbjct: 203 ALDMRLGWAAGAGLEY-AFTPSWSARLEYLYYRFDKTN 239
>gi|39933882|ref|NP_946158.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192289301|ref|YP_001989906.1| porin [Rhodopseudomonas palustris TIE-1]
gi|39647729|emb|CAE26249.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192283050|gb|ACE99430.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 449
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 48/177 (27%), Gaps = 32/177 (18%)
Query: 47 VPIRHDFNGPYAGLS--------------ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM 92
P ++ G Y G + A G GYN + S +
Sbjct: 241 TPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQASNWV 300
Query: 93 YGVEGDVRYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
+GVE D + + + G+ R R GY + S L Y T G
Sbjct: 301 FGVEADFQGSTQKDQRASVLGPRAYYDAKLPWFGTARGRIGYSL-GSTLFYGTAGYAYGN 359
Query: 145 KYETGKAG----EITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG 192
+ G AG G+E L + ++ EY
Sbjct: 360 IKSDIVSSIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLYVDLGSTTD 416
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 74/225 (32%), Gaps = 47/225 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++F V ++ A S AQAAD +A + V +D+ G Y G
Sbjct: 1 MKRIFAGVVLAGTAAVS---AQAADLAVKAPYLK----------APVAAVYDWTGFYIGA 47
Query: 61 SALYNGSFGEEAHHNAGG---------------SIFAGYNVEDSCI----MYGVEGDVRY 101
+ + H GG GYN + + G+E D++
Sbjct: 48 NVGVGLGRNLQTHAYPGGASLNTTYLQPQGVIGGGQIGYNWQLGSFLGPMLLGLEADIQG 107
Query: 102 TVPV--------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG- 152
+ LA N + G++R R G V + Y T G V T G
Sbjct: 108 SGASDGYTSLNGLATNYNQKLDWFGTVRGRVGL-VRGPAVAYFTGGYAVGSVKTTVTEGG 166
Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ + G G GVE L + ++EY F
Sbjct: 167 LVAFDNSKTRSGWVIGSGVEA-ALGGNWTGKIEYLYLDLGNQTDF 210
>gi|156739586|gb|ABU93453.1| Omp25 [Brucella melitensis]
Length = 64
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 VKQGFEGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58
Query: 172 LSESLV 177
L+++++
Sbjct: 59 LTDNIL 64
>gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 222
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 79
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 138
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 198 SQVNGIEQRNNLKNHSIKAGLNYKF 222
>gi|296447421|ref|ZP_06889346.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296255041|gb|EFH02143.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 271
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 71/233 (30%), Gaps = 59/233 (25%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L ++ + SA AAD + G YAGL
Sbjct: 1 MKTLSALSMIT--LGFAVSSASAADLPSAK---------APVAFVEPAPAFTWTGVYAGL 49
Query: 61 SALYNGS--------------------FGEEAHHNAGGSIFAGYNVEDS--CIMYGVEGD 98
+ Y S F A G GYN + + + G+E D
Sbjct: 50 NIGYGWSEKQSIAGTVSAAGTPIAFWSFPSSAVDGVLGGGQIGYNRQFAGTSFVVGLEAD 109
Query: 99 V------RYTVPVLADNIHS---------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
Y+ N G++R R GY V+ +LL+Y T G
Sbjct: 110 FRGAGVNGYSNGFGPTNQFGYTPFVNARQQLDWFGTVRGRLGYAVAPTLLVYGTGGFAYG 169
Query: 144 QKYETGKAG----------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
T G + + G TAG GVE L A++EY ++
Sbjct: 170 GYRATYSGGAVGVPVTVSVSNSDVRTGWTAGGGVEWAFL-PRWSAKVEYLYTE 221
>gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str.
9-941]
gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus
2308]
gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str.
870]
gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str.
Tulya]
gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str.
292]
gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str.
C68]
gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus]
gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus]
gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus
2308]
gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
Length = 212
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G E G+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSASGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|90424285|ref|YP_532655.1| hypothetical protein RPC_2788 [Rhodopseudomonas palustris BisB18]
gi|90106299|gb|ABD88336.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 578
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 75/253 (29%), Gaps = 78/253 (30%)
Query: 29 RAHHGGRGVVPTIATNRYV----PIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAG 77
++ + P A + P+ ++ G Y G ++ S G
Sbjct: 318 QSSYKWGDTTPPSAAVGFATKAPPLAVNWTGVYVGGQLGAGFGPKHWSDSIGSTTSLVNP 377
Query: 78 GSIF-AG--------------------------YNVEDSCIMYGVEGDVRYTVPVLADNI 110
GS F AG YN + + GVE DV + + I
Sbjct: 378 GSDFPAGTPPGLNVGGFGKSTPMAGGLGGAQLGYNFQTGRTVLGVEADVAFADLKGSHTI 437
Query: 111 HSLHGIG---------GSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKA--------- 151
+S G G GS+ R GY V +LL G V +
Sbjct: 438 YSGLGGGQAEAHTTALGSVTGRVGYAVERNLLYVKAGGAWAVTDHTLDTSSIFIPSQGEG 497
Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------------KVE 191
+ +G T G G+E + A+LEY + ++
Sbjct: 498 CCHDNVRSTRLGWTVGAGLEY-AVDRHWSAKLEYDYMDFGSQSVSFPVNARLGLPSVDID 556
Query: 192 GFYNTISLGVGMK 204
++ + +GV K
Sbjct: 557 QAFHVVKMGVNYK 569
>gi|154246410|ref|YP_001417368.1| porin [Xanthobacter autotrophicus Py2]
gi|154160495|gb|ABS67711.1| porin [Xanthobacter autotrophicus Py2]
Length = 258
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 55/197 (27%), Gaps = 43/197 (21%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGS------------------FGEEAHHNAGGSIFA 82
V + G Y G + Y G
Sbjct: 28 PVKAVAVAPVFSWTGFYIGANVGYGGDKFTFDEVESYNGYPYYATSTSLNSSGFFAGGQI 87
Query: 83 GYNVED-SCIMYGVEGDVRYTVPVLADNIHS---------------LHGIGGSLRIRGGY 126
GYN + + ++ G E D++++ + S G++R R GY
Sbjct: 88 GYNYQFANNVVLGAETDLQWSGIEGKADYSSVYLYGGYPYTSSFGASVDYFGTIRARIGY 147
Query: 127 EVSDSLLLYATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
D L Y T G + +G + G T G GVE ++ + +
Sbjct: 148 AF-DRFLPYITGGAAYGKTKVSGSYYDYSVGGFSASGTNWGWTVGGGVEY-AITNNWTFK 205
Query: 180 LEYRASKYSKVEGFYNT 196
EY + Y +
Sbjct: 206 TEYLYVDLGSTDYTYAS 222
>gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 222
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 79
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 138
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 198 SQVNGIEQRNNLKNHSIKAGLNYKF 222
>gi|156739606|gb|ABU93463.1| Omp25 [Brucella canis]
Length = 63
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
GI GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 VKQGIEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58
Query: 172 LSESL 176
L++++
Sbjct: 59 LTDNI 63
>gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 212
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 71/202 (35%), Gaps = 26/202 (12%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHNA 76
SA AAD + + V HD++G Y G + S + A
Sbjct: 21 SAFAADMMGGTDYTYSDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASRTGA 72
Query: 77 GGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134
G I G N+++ I++G EG+ + G+ + + GY D L+
Sbjct: 73 LGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DKTLV 131
Query: 135 YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-- 192
Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 132 YGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVKSQV 190
Query: 193 ---------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 191 NGIEQRNNLKNHSIKAGLNYKF 212
>gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
Length = 212
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 71/202 (35%), Gaps = 26/202 (12%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHNA 76
SA AAD + + V HD++G Y G + S + A
Sbjct: 21 SAFAADMMGGTDYTYSDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASRTGA 72
Query: 77 GGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134
G I G N+++ I++G EG+ + G+ + + GY D L+
Sbjct: 73 LGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DKTLV 131
Query: 135 YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-- 192
Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 132 YGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVKSQV 190
Query: 193 ---------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 191 NGIEQRNNLKNHSIKAGLNYKF 212
>gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis]
gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
Length = 212
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
S SA AAD + + V HD++G Y G + S +
Sbjct: 18 SAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|46202723|ref|ZP_00052712.2| COG3659: Carbohydrate-selective porin [Magnetospirillum
magnetotacticum MS-1]
Length = 693
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 68/214 (31%), Gaps = 57/214 (26%)
Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE--------------------- 70
HG PT ++P + G Y G +FG+
Sbjct: 10 HGADLATPTPHDATHLPSFGTWAGGYTGWQGSAGDAFGDFGFGSGMIGRRSVPEFRTGDA 69
Query: 71 EAHHNAG-------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-------------- 109
++AG G +F GY + +YGVE DV T +
Sbjct: 70 TGRNDAGRNATTALGGLFGGYAWQIGPFVYGVEADVDATNLKRPVSSTTPGFGFEGLDPA 129
Query: 110 ---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI--------- 157
I + + G+ R R GY L+YA+ G AQ +
Sbjct: 130 FPVIRAKADVFGTARARVGYAFE-RYLVYASFGLAGAQVRFLTNFPDPATTSAPALRRGR 188
Query: 158 -AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
+G + G G+E ++E L LEYR +
Sbjct: 189 AFLGFSLGAGIEY-AITEHLALGLEYRYLDLGRS 221
>gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330]
gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330]
gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915]
gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti]
gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 212
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|119383169|ref|YP_914225.1| outer membrane protein [Paracoccus denitrificans PD1222]
gi|119372936|gb|ABL68529.1| outer membrane protein [Paracoccus denitrificans PD1222]
Length = 255
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 84/255 (32%), Gaps = 58/255 (22%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ ++ ++A + +A AA+ V A D+ G YAGL+
Sbjct: 6 VKASLTAGAVASLALGTALAANAGGYTPPVVDTDV--TAPVVESAPVGDWAGAYAGLTLG 63
Query: 64 ------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105
Y G G+ A + GY + ++G E + +
Sbjct: 64 YAFGGDDRVGFTEVDTGTYLGDAGKLELGGANAGLHVGYRWQRDRWVFGPE--LGFEAGN 121
Query: 106 LADNIHSLHGIGGS------------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153
+ D I + +GGS LR++ GY + LLLY G A +
Sbjct: 122 IKDTITFDNQLGGSTDVSSKIRNVLALRLKTGYALRPDLLLYGIAGIARADVEYKVAGTD 181
Query: 154 ITP---------IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----------- 193
+ + G G+GVE LS+ + EY + + K
Sbjct: 182 GSGGSMSESRDFKSNGYIVGLGVE-RKLSDRMSVTGEYEYANFGKTTRTFQVDGGVSTQA 240
Query: 194 ---YNTISLGVGMKF 205
Y+ + LG+ KF
Sbjct: 241 TPDYHNVKLGLNFKF 255
>gi|39936434|ref|NP_948710.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39650289|emb|CAE28812.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 240
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 71/238 (29%), Gaps = 41/238 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + + ++ +A A AAD P + +++ G Y G
Sbjct: 1 MKTMKNTLLGAAAVIALSAPAFAADLP---PRPYTKAAPAYTAPE---VVYNWTGFYVGG 54
Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGI 116
+ N+G G + G + + + + G+E + I
Sbjct: 55 HVGGAWAGDNNITGNSGRFFGGVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGST 114
Query: 117 G-------GSLRIRGGYEVSDSLLLYATVGPD--------VAQKYETGKAGEITPIAIGG 161
GS+ R GY L+YA G + G
Sbjct: 115 ATEDTRGLGSVTGRLGYAW-GPTLVYAKGGYAWRDSDLSVASLGGVPSGYTTSGSRNDGY 173
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205
T G G+E + S A++EY+ K+ +T+ G+ +F
Sbjct: 174 TVGAGLEY-MFAPSWSAKVEYQYYKFGDTTFTGGPADVVGTSFRNDEHTVKAGINYRF 230
>gi|188581225|ref|YP_001924670.1| carbohydrate-selective porin OprB [Methylobacterium populi BJ001]
gi|179344723|gb|ACB80135.1| Carbohydrate-selective porin OprB [Methylobacterium populi BJ001]
Length = 703
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 70/215 (32%), Gaps = 63/215 (29%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGE---------------------EAHHNAGG--- 78
R P D++G YAG+ SFG + GG
Sbjct: 36 AERARPRFLDWSGLYAGVQGSAGASFGNYDIGPTTIGTRRVRTISTGDATGSRDLGGDAT 95
Query: 79 ----SIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-----------------IHSLHGIG 117
FAG+N +D I+YG+E D+ T + +
Sbjct: 96 TVAAGAFAGWNWQDGAIVYGLEADLAGTNLKRGARSDAPGFGYEAVDPPFALVREKTDLF 155
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP----------IAIGGTAGVGV 167
G+ R R GY ++ L+YAT G A +++ +G T G GV
Sbjct: 156 GAARARLGYAFGNN-LIYATFGLTGANGRVLATYPDLSGGPTATAARNVSYLGYTLGAGV 214
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
+ + L ++YR S + G+G
Sbjct: 215 QF-AVDPHLSLGIDYRYSDLG------ESARFGLG 242
>gi|192292221|ref|YP_001992826.1| porin [Rhodopseudomonas palustris TIE-1]
gi|192285970|gb|ACF02351.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 240
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 71/238 (29%), Gaps = 41/238 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + + ++ +A A AAD P + +++ G Y G
Sbjct: 1 MKTMKNTLLGAAAVIALSAPAFAADLP---PRPYTKAAPAYTAPE---VVYNWTGFYVGG 54
Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGI 116
+ N+G G + G + + + + G+E + I
Sbjct: 55 HVGGAWAGDNNITGNSGRFFGGVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGST 114
Query: 117 G-------GSLRIRGGYEVSDSLLLYATVGPD--------VAQKYETGKAGEITPIAIGG 161
GS+ R GY L+YA G + G
Sbjct: 115 ATEDTRGLGSVTGRLGYAW-GPTLVYAKGGYAWRDSDLSVASLGGVPSGYTASGSRNDGY 173
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205
T G G+E + S A++EY+ K+ +T+ G+ +F
Sbjct: 174 TVGAGLEY-MFAPSWSAKVEYQYYKFGDTTFTGGPADVVGTSFRNDEHTVKAGINYRF 230
>gi|192291194|ref|YP_001991799.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
gi|192284943|gb|ACF01324.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
Length = 997
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 73/225 (32%), Gaps = 46/225 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + V S+ + SA AAD A VP ++ G Y G
Sbjct: 1 MKNFPAWLSVWSVVAVACGSAHAADLQNG------------AVPSAVPAATNWTGFYIGT 48
Query: 61 SALYNGS-------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
S G NA I GYN + + G+EGD +
Sbjct: 49 HVGAAASDSAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQFGNYVLGIEGDASF 108
Query: 102 -TVPVLADNIHSLHGIGG------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-- 152
++ LA +H +L R GY D LL+Y G A + +G
Sbjct: 109 GSINGLARCLHGTFACTSRIDELWTLAARFGYAAGD-LLVYGKAGAAWADVHRRMASGNF 167
Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
E + G G GVE L L A++EY + +
Sbjct: 168 VNVLEASETRSGWLLGAGVEYAFL-PGLSAKIEYNYADFGSRSLT 211
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 66/208 (31%), Gaps = 43/208 (20%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------H 74
D + HG P IA ++ G Y G S A
Sbjct: 765 DAAEASAHGITKAPPRIAPT-------NWTGLYVGASVGAGWGRTTYADPFPTPTTGDRA 817
Query: 75 NAGGSIFAGY---NVEDSCIMYGVEGDVRYTVPVLADNIHSLH------GIG-------- 117
+ GG++ G N + ++ GVE + D + G
Sbjct: 818 DLGGALLGGQIGANYQFGHLVAGVEASANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAI 877
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVG 170
G+ RGGY + D LLY G ++ + G T G T G G+E
Sbjct: 878 GAFTARGGYAI-DRTLLYVKGGAAWDRQQDQFNTVGVGGTTLANTSTNWGWTVGGGLEY- 935
Query: 171 GLSESLVARLEYRASKYSKVEGFYNTIS 198
L+ S LEY+ + F +++
Sbjct: 936 ALAPSWSMALEYKYFDFGASPAFSTSVT 963
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 66/217 (30%), Gaps = 49/217 (22%)
Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA----------- 82
G V + + G Y G+ A G FG +A G++ A
Sbjct: 240 GAASVSAAPLPGVPLPQWSWTGIYLGVHAG--GGFGSNDWDSATGALLAASTSGGFPGRG 297
Query: 83 -----------GYNVEDSCIMYGVEGDV------RYTVPVLADNI------HSLHGIGGS 119
G N + + GVE Y H+ G+
Sbjct: 298 DSSGLFGGGQIGANYQFGRWVAGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGT 357
Query: 120 LRIRGGYEVSDSLLLYATVGPD-VAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLS 173
+ R G + LL+Y G + +AG + G G G+E LS
Sbjct: 358 ITGRLGQTWGN-LLIYGKAGAAWATGSSDAQRAGSASRFTESGTRWGWVTGTGLEY-ALS 415
Query: 174 ESLVARLEYRASKYSK-----VEGFYNTISLGVGMKF 205
+L A +EY + V+ F N +G KF
Sbjct: 416 PNLSAFVEYNHVDFGTQDTAYVDQFGNASEVGFKQKF 452
>gi|312113068|ref|YP_004010664.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
gi|311218197|gb|ADP69565.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
Length = 260
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 72/234 (30%), Gaps = 41/234 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M + G + + A AADP +GG G + V + G Y G
Sbjct: 1 MSVVKSVGGAALGMFLAAQVAYAADPYYGGGYGGYGGYKDPYPPQPVAPIPLWQGFYIGG 60
Query: 61 SALYNGSFGEEAHH-------------------NAGGSIFAGYNVEDSCIMYGVEGDVRY 101
+ S E A + G + GYN+ ++G+EGD+
Sbjct: 61 NIGGAWSTIETASNVVFVNGATTVLSDRSVEGSGFLGGLQLGYNIPIGNFLWGIEGDLGG 120
Query: 102 TVPVLADN------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG 149
+ + + S G G + +RGG+ + + L+Y G
Sbjct: 121 LGNDASKSFAVGGVLPSVLTVSSDGGWYGDVTVRGGF-LYGNALIYLKGGFGFYTGETNV 179
Query: 150 KAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
+ G T G G+E +S + EY + ++
Sbjct: 180 TLVTDNISALRQSSGTFTGWTLGGGLEYQ-VSPRWSIKAEYLYFDFGDSTLNFD 232
>gi|254561199|ref|YP_003068294.1| outer membrane porin [Methylobacterium extorquens DM4]
gi|254268477|emb|CAX24434.1| Putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens DM4]
Length = 703
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/241 (21%), Positives = 75/241 (31%), Gaps = 75/241 (31%)
Query: 7 AVGVSSLALASF--CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
AV A+ F + AAD RA P D++G YAG+
Sbjct: 14 AVSAGLAAILGFHAGAGMAADLAERAG----------------PRFIDWSGFYAGVQGSA 57
Query: 65 NGSFGE----------------EAHHNAG------------GSIFAGYNVEDSCIMYGVE 96
SFG G G FAG+N +D +YGVE
Sbjct: 58 GASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDATTAVGGAFAGWNWQDGAFVYGVE 117
Query: 97 GD-VRYTVPVLADNIHSLHGIG----------------GSLRIRGGYEVSDSLLLYATVG 139
D V + A + + G G+ R R GY ++ L+YAT G
Sbjct: 118 ADLVGANLKRGARSDATGFGYEGIDPPFALIREKTEVFGAARARLGYAFGNN-LIYATAG 176
Query: 140 PDVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
A + +G T G GV+ + L ++YR S +
Sbjct: 177 LTGANGRVLATYPDLAGGPTVTATRNVSYLGFTLGAGVQF-AVDPHLSLGIDYRYSDLGE 235
Query: 190 V 190
Sbjct: 236 S 236
>gi|319898375|ref|YP_004158468.1| Hemin-binding protein E [Bartonella clarridgeiae 73]
gi|319402339|emb|CBI75878.1| Hemin-binding protein E [Bartonella clarridgeiae 73]
Length = 288
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 80/290 (27%), Gaps = 98/290 (33%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--- 63
+ S QAAD + V + G Y G
Sbjct: 6 LMITSIWIFVLASMVQAADIMIPYQQQSHQ-----PAPMIVSSDFSWTGFYFGGQVGGFS 60
Query: 64 ----YNGSFGEEAH------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106
G +A G ++AG NV ++ G++ D+ ++
Sbjct: 61 SKSTVRGRRNSDAEWESLEPKYLPKLSGVIGGVYAGSNVNFGNGLILGIDTDMAWSGKKD 120
Query: 107 ADNIHS-------------------------------------------------LHGIG 117
IH
Sbjct: 121 TKIIHREEQNEETVEEESTRRQENTRNNNSRVERSVQVCAVAEEGSNPVSSSHTLKEKWV 180
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYE-------------TGKAGEITPIAIGGTAG 164
G+ R+R G+ V D ++ Y + G Q + T + T + +G T G
Sbjct: 181 GATRVRIGFAV-DRVMPYVSGGVAYTQLQDLLTIRKEGKELPITRNVIDDTKVFVGYTFG 239
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205
G++ +++S++ R EYR S + K + N +GV KF
Sbjct: 240 GGIDF-AMAKSVILRAEYRYSDFGKKKFAKDKMEIGYKTNDFRVGVAYKF 288
>gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99]
gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94]
gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99]
gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis]
gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti]
gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti]
gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94]
gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99]
Length = 212
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|12620707|gb|AAG60983.1|AF322013_102 ID693 [Bradyrhizobium japonicum]
Length = 325
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 35/210 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ + AL + + D + +P A D++G Y G
Sbjct: 85 MKKILILTACIG-ALCAAAPSFGTDLAGQPVKVKAAPLPVAA------PIIDWSGYYMGA 137
Query: 61 SALY---------NGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLA-- 107
+ + NG E H++ GG++ GY + ++YG+EG + +
Sbjct: 138 NGGWGTSHNCWDFNGITSEGCHNSTGGTVGGQIGYRWQIFNMVYGLEGQGNWADFRGSNV 197
Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGKA-----GEI 154
D + + G L GY +++LLY G V Y A G+
Sbjct: 198 STAFPTDTVGTTTDAFGLLTGHIGYAF-NAVLLYGKGGAAVTSNTYYVNSVATGTELGKN 256
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
+ GG G G EV L+ + A +EY
Sbjct: 257 NDVRWGGVLGAGAEVS-LTPNWSAGVEYNH 285
>gi|39933934|ref|NP_946210.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39647781|emb|CAE26301.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 244
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 67/205 (32%), Gaps = 46/205 (22%)
Query: 39 PTIATNRYVP-IRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE 87
P Y P +++ G Y G G+F + G G + AGY+ +
Sbjct: 38 PYTKAPAYAPAPVYNWTGFYIGGHIG--GAFSGDNSIGTGVTASDNGKFLGGVQAGYDWQ 95
Query: 88 D-SCIMYGVEGDVRYTVPVLADNIHSLHGIGG-------------SLRIRGGYEVSDSLL 133
+ GVEG +Y+ + N G G S+ R GY L
Sbjct: 96 FAPNWVLGVEG--QYSW-LSGTNSSVSWGAPGAVFTYSDNQRGLASVTGRLGYTW-GPAL 151
Query: 134 LYATVGPDVAQ-----KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
LY G A + + G T G G+E + + ++EY+ +
Sbjct: 152 LYVKGGWAYADYSSSLTFNNVGVAVDSKT-DGYTVGGGLEYL-FAPNWSGKIEYQYYDFG 209
Query: 189 KV--------EGFYNTISLGVGMKF 205
V + + + G+ +F
Sbjct: 210 NVTLAPGFTAKNDEHVVKAGLNYRF 234
>gi|209885837|ref|YP_002289694.1| OmpA domain protein transmembrane region-containing protein
[Oligotropha carboxidovorans OM5]
gi|209874033|gb|ACI93829.1| OmpA domain protein transmembrane region-containing protein
[Oligotropha carboxidovorans OM5]
Length = 236
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 72/226 (31%), Gaps = 50/226 (22%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--YNGS------- 67
S S AAD R T A V +++ G Y G + GS
Sbjct: 14 SSTSVFAADLAAR--------PYTKAPPAPVAPIYNWTGLYIGAQVGGAFQGSSGFVTDD 65
Query: 68 ---FGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVR------YTVPVLADNIHSLHGIG 117
G + G G N + + G+EG+ YT D I +
Sbjct: 66 PLVTGNRDDSSFLGGGVLGANYQFSPNWVLGIEGEFNGLSNNRYTFTDGFDGIRVKNDWL 125
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-----GGTAGVGVEVGGL 172
S+ R GY ++YA G + G TP + G T G G+E
Sbjct: 126 ASVTGRLGYTW-GPGMIYAKGGVAF---RDNGGIAATTPFLVSRDTTGYTVGAGLEY-MF 180
Query: 173 SESLVARLEYRASKYSKV-------------EGFYNTISLGVGMKF 205
+ + A++EY+ + + +T+ G+ F
Sbjct: 181 APAWSAKIEYQYYDFDRTALTFGTLPSTVSYRDDLHTVKAGINYHF 226
>gi|27379978|ref|NP_771507.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353131|dbj|BAC50132.1| bll4867 [Bradyrhizobium japonicum USDA 110]
Length = 258
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 27/178 (15%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSAL---------YNGSFGEEAHHNAGGSIFA--GYNVE 87
P V +D++G Y G++ G E +H GG++ GY +
Sbjct: 48 PYTKAPAMVAAIYDWSGFYIGINGGGGSAHSTWDLVGGGREGSHDATGGTVGGQIGYRWQ 107
Query: 88 DSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
++GVEG + + A S G + + GY +++L+Y G
Sbjct: 108 SGQWVFGVEGQGNWADFSGDNVSALFATRNRSKIDSFGLITGQVGYAW-NNVLIYVKGGA 166
Query: 141 DVAQKYETGKA-------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
VA + GGT G G+E G + + +EY +
Sbjct: 167 AVAGTKYEVFSTASGALLSSNDQTRWGGTVGAGLEY-GFAPNWSVGVEYNHIFLQDKD 223
>gi|163851436|ref|YP_001639479.1| carbohydrate-selective porin OprB [Methylobacterium extorquens PA1]
gi|163663041|gb|ABY30408.1| Carbohydrate-selective porin OprB [Methylobacterium extorquens PA1]
Length = 703
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 64/203 (31%), Gaps = 57/203 (28%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGE----------------EAHHNAG--------- 77
R P D++G YAG+ SFG G
Sbjct: 36 AERARPRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDAT 95
Query: 78 ---GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS-----------------LHGIG 117
G FAG+N +D ++YG+E D+ + +
Sbjct: 96 TAVGGAFAGWNWQDGALVYGIEADLVGANLKRGARSDATGFGYEGIDPPFALIREKTDVF 155
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY------ETGKAGEITPIA----IGGTAGVGV 167
G+ R R GY ++ L+YAT G A + T +G T G GV
Sbjct: 156 GAARARLGYAFGNN-LIYATAGLTGANGRVLATYPDLAGGPTATATRNVSYLGFTLGAGV 214
Query: 168 EVGGLSESLVARLEYRASKYSKV 190
+ + L ++YR S +
Sbjct: 215 QF-AVDPHLSLGIDYRYSDLGES 236
>gi|218678361|ref|ZP_03526258.1| outer membrane protein [Rhizobium etli CIAT 894]
Length = 96
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + S A+A +AQAAD V + +A + V ++ G Y G
Sbjct: 1 MRVLIAGLMASVFAIAGISAAQAADAVDQIPEA------PVAQDAPVKPAGNWEGFYLGG 54
Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVR 100
+ YN GSFG + H + GG +F GYN + I+YGVE D+
Sbjct: 55 AGTYNMGSFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLG 96
>gi|240138602|ref|YP_002963074.1| putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens AM1]
gi|240008571|gb|ACS39797.1| Putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens AM1]
Length = 703
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 61/194 (31%), Gaps = 57/194 (29%)
Query: 52 DFNGPYAGLSALYNGSFGE----------------EAHHNAG------------GSIFAG 83
D++G YAG+ SFG G G FAG
Sbjct: 45 DWSGFYAGVQGSAGASFGNYDLGPTTIGPRRVRSISTGDATGSRDLGGDATTAVGGAFAG 104
Query: 84 YNVEDSCIMYGVEGDVRYTVPVLADNIHS-----------------LHGIGGSLRIRGGY 126
+N +D ++YG+E D+ + + G+ R R GY
Sbjct: 105 WNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVFGAARARLGY 164
Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGGLSESL 176
++ L+YAT G A + +G T G GV+ + L
Sbjct: 165 AFGNN-LIYATAGLTGANGRVLATYPDLAGGPTVTATRNVSYLGFTLGAGVQF-AVDPHL 222
Query: 177 VARLEYRASKYSKV 190
++YR S +
Sbjct: 223 SLGIDYRYSDLGES 236
>gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33]
gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae]
gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33]
Length = 212
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPV--------AAGLHDWSGNYVGAQVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 G-----------FYNTISLGVGMKF 205
++I G+ KF
Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212
>gi|192291549|ref|YP_001992154.1| hypothetical protein Rpal_3175 [Rhodopseudomonas palustris TIE-1]
gi|192285298|gb|ACF01679.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 566
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 73/228 (32%), Gaps = 57/228 (25%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + VS++ S +A+AAD R A ++ G Y G
Sbjct: 1 MRT--SIICVSAVLAVSCGAAEAADLSR-------------APATKAITAWNWTGFYLGG 45
Query: 61 SALYNGSFGEEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------ 98
G + + G SI+ AGYN + + GVE D
Sbjct: 46 HLG-AGFGTAKVDNPFGPSIYGDTVRAPKALAGLQAGYNWQAHGSPWVLGVEVDASAIDA 104
Query: 99 ------VRYTVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV-------- 142
+ Y+ ++ N + G+L R G+ L+Y G
Sbjct: 105 DGTNTCLAYSGQFVSANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGGGAFLFGNFRMT 164
Query: 143 --AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
A Y + E+ G T G G+E LS R EY + +
Sbjct: 165 TNAPDYLNQPSAELDTTRWGWTVGAGIE-HALSSRWAVRAEYDYANFG 211
>gi|319408577|emb|CBI82232.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1]
gi|319408616|emb|CBI82271.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1]
Length = 439
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 24/115 (20%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-------------YETGKAGEITPIAI 159
G+ R+R G+ V D ++ Y G AQ + + I +
Sbjct: 327 KQKWSGATRVRIGFAV-DRIVPYIAGGVAYAQLQNIFSRSIETEGHEISSSSLSDKKIMV 385
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205
G T G GV+ ++++++ R EYR S + K ++ N +GV KF
Sbjct: 386 GYTLGGGVDF-AMADNVILRAEYRYSDFGKQKFAKDKLELDYQTNDFRVGVAYKF 439
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 38/138 (27%)
Query: 5 FLAVGVSSLALASFCSAQAAD--------PVRRAHHGGRGVVPTIA-------TNRYVPI 49
+ S + L + AQAAD PV + + P +
Sbjct: 4 KCLISTSIITLFTASVAQAADIMVPRESRPVVSPPQASKQISPPVEMSPNSDIPPVISAP 63
Query: 50 RHDFNGPYAGLS-ALYNGSFGEEAHHNAG---------------------GSIFAGYNVE 87
+NG Y G ++G G + G G ++AG NV+
Sbjct: 64 TFSWNGFYLGGQIGGFSGKTGISLYAKKGPSTREWTPVEKDTVPQLSGFMGGLYAGANVD 123
Query: 88 DSC-IMYGVEGDVRYTVP 104
+ GV+ D+ ++
Sbjct: 124 LGNSFILGVDTDIVWSNK 141
>gi|39935901|ref|NP_948177.1| hypothetical protein RPA2834 [Rhodopseudomonas palustris CGA009]
gi|39649755|emb|CAE28276.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 566
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 73/228 (32%), Gaps = 57/228 (25%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + VS++ S +A+AAD R A ++ G Y G
Sbjct: 1 MRT--SIICVSAVLAVSCGAAEAADLSR-------------APATKAITAWNWTGFYLGG 45
Query: 61 SALYNGSFGEEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------ 98
G + + G SI+ AGYN + + GVE D
Sbjct: 46 HLG-AGFGTAKVDNPFGPSIYGDTVRAPKALAGLQAGYNWQAHGSPWVLGVEVDASAIDA 104
Query: 99 ------VRYTVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV-------- 142
+ Y+ ++ N + G+L R G+ L+Y G
Sbjct: 105 DGTNTCLAYSGQFVSANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGGGAFLFGNFRMT 164
Query: 143 --AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
A Y + E+ G T G G+E LS R EY + +
Sbjct: 165 TNAPDYLNQPSAELDTTRWGWTVGAGIE-HALSSRWAVRAEYDYANFG 211
>gi|316932343|ref|YP_004107325.1| porin [Rhodopseudomonas palustris DX-1]
gi|315600057|gb|ADU42592.1| porin [Rhodopseudomonas palustris DX-1]
Length = 448
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 54/201 (26%), Gaps = 43/201 (21%)
Query: 47 VPIRHDFNGPYAGLSALYNGSFGEE-------------AHHNAGGSIFAGYNVEDSCIMY 93
P ++ G Y G + + A G GYN + ++
Sbjct: 241 APPPANWAGLYIGGNFGGATARDRSSVTIAGVTDAFNLAPDGFFGGGQIGYNWQAVNWVF 300
Query: 94 GVEGDVRYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
GVE D + + + G+ R R GY + S L Y T G
Sbjct: 301 GVEADFQGSTLKDQRAAVLGPAVFYDAKLPWFGTARGRIGYSL-GSTLFYGTAGYAYGNI 359
Query: 146 YETGKAG----EITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG---- 192
+ G AG G+E L + ++ EY
Sbjct: 360 KTDIVSAIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLYVDLGSTTDAFGA 419
Query: 193 --------FYNTISLGVGMKF 205
+T+ G+ F
Sbjct: 420 TGINTTKVTQHTLRTGINYHF 440
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 71/225 (31%), Gaps = 47/225 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ V ++ A S AQAAD +A + V +D+ G Y G
Sbjct: 1 MKRILAGVVLAGTAAVS---AQAADLAVKAPYMK----------APVAAVYDWTGFYIGA 47
Query: 61 SALYNGSFGEEAHHNAGGSIF---------------AGYNVEDSCIM----YGVEGDVRY 101
+ + H G GYN + + GVE D++
Sbjct: 48 NVGVGLGRDLQTHSYPGAGTLNSTYLQPQGAIGGGQIGYNWQFGSMFGPMLIGVEADIQG 107
Query: 102 TV--------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG- 152
+ LA N + G++R R G V Y T G V T G
Sbjct: 108 SGMSDGYTSLNGLATNYNQKLDWFGTVRGRVGL-VRGPAFGYFTGGYAVGNVKTTVTEGG 166
Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ + G G GVE L + ++EY F
Sbjct: 167 LVAFDNSKTRSGWVIGSGVEA-ALGGNWSGKIEYLYLDLGNQTDF 210
>gi|240142230|ref|YP_002966740.1| hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens
AM1]
gi|240012174|gb|ACS43399.1| Hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens
AM1]
Length = 269
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 48/192 (25%)
Query: 52 DFNGPYAGLSALYNGSFGEEAHHN---------------AGGSIFAGYNVEDSCIMYGVE 96
D++G Y G + + G G++ + +++G
Sbjct: 58 DWSGAYVGFQVGGAFAGKPSIGDDRVTRSLLSNGREFSGFTGGGHVGFDYQVGSVVFGGI 117
Query: 97 GDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSD-SLLLYATV 138
GD+ Y + I G++R R G+ D +L Y T
Sbjct: 118 GDINYVDIRAKGAGPFTLVQNGVVTTYNATGTAGLEIDGTVRARLGFAGLDLPILPYVTG 177
Query: 139 GPDVAQKY--------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
G + + T + + +G G GV+ ++++ AR+EY
Sbjct: 178 GLALGTGFGNFRLLGTDPATGAVTSQNLRDSRTNVGYAVGGGVDY-AFTDNIRARVEYLY 236
Query: 185 SKYSKVEGFYNT 196
+ S+ F N
Sbjct: 237 TDLSQARYFQNV 248
>gi|300025034|ref|YP_003757645.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526855|gb|ADJ25324.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 231
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 67/200 (33%), Gaps = 47/200 (23%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHH---------NAGGSIFAGYNVEDSC-IMYGVEGDVR 100
D+ G YAGL A Y+ S + G + GYN + ++ G+E D+
Sbjct: 34 FDWTGAYAGLQAGYSWSSARYSDDTYLSEANPEGFIGGGYIGYNYQLPSRLVLGIEADIV 93
Query: 101 YTVPVLADN---------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ +D + ++R R GY L Y G
Sbjct: 94 GSGMDGSDGQRYLDDPSVSIAGVELEMETRWSAAVRGRIGYAY-GRYLPYIAGGVSFTDY 152
Query: 146 Y------ETGKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK------------ 186
+ G G GVE ++ ++ R EYR +
Sbjct: 153 EFRWIDHVNATVPFKREQSRTGWNIGTGVEYAA-NDWVIVRAEYRYTDFGTDHFPNDFAG 211
Query: 187 -YSKVEGFYNTISLGVGMKF 205
YSK+E + + LGVG+KF
Sbjct: 212 PYSKMELQTHDLRLGVGVKF 231
>gi|148253089|ref|YP_001237674.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|146405262|gb|ABQ33768.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1]
Length = 598
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 55/156 (35%), Gaps = 31/156 (19%)
Query: 78 GSIFAGYNVEDSC-IMYGVEGDVR-----------YTVPVLADNIHSLHGIGGSLRIRGG 125
G + GYN E ++ GVE D+ ++ + GSLR R G
Sbjct: 13 GGLQLGYNRELPSRVVLGVETDLSFPNYLDFDDIIWSGVNANGRVTEKVDYYGSLRGRIG 72
Query: 126 YEVSDSLLLYATVGPDVAQKYE-----TGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
Y L+YAT G +Q + G AG GVE + + AR+
Sbjct: 73 YA-PARWLIYATAGLAYSQGRLTEDPFDPATQKKIGFRAGWVAGAGVEAP-VDGNWTARI 130
Query: 181 EYRASKYSKVEGF------------YNTISLGVGMK 204
EY S + + +T+ LG+ K
Sbjct: 131 EYLYSNFGSLNVMLPSGTSYGSTFDLHTVRLGLNRK 166
>gi|90424594|ref|YP_532964.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
gi|90106608|gb|ABD88645.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
Length = 236
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 71/238 (29%), Gaps = 45/238 (18%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+KL L ++ + A AAD P + +++ G Y G
Sbjct: 1 MRKLLLG---TAALMVLAAPAFAADL----PAPTYTKAPAYTAPE---VVYNWTGFYIGG 50
Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGI 116
+ N G G + G + + + G+E + + G
Sbjct: 51 HVGGAFAGDNNISGNDGQFLGGVQIGADYQFTRNWVVGLEAQYSWLPSNDNGGLAFPGGS 110
Query: 117 --------GGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAIGG 161
GS+ R GY LLYA G ++ G
Sbjct: 111 LVTQDNRGLGSVTGRLGYTW-GPALLYAKGGYAFRDSSLDLSNTGVGVPFTTSGNHRDGY 169
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSK--------------VEGFYNTISLGVGMKF 205
T G G+E + + A++EY+ + V +T+ G+ +F
Sbjct: 170 TVGAGLEY-MFAPNWSAKVEYQYYDFGNTTFTGGPPDVLGASVRNDEHTVKAGLNYRF 226
>gi|218530244|ref|YP_002421060.1| carbohydrate-selective porin OprB [Methylobacterium
chloromethanicum CM4]
gi|218522547|gb|ACK83132.1| Carbohydrate-selective porin OprB [Methylobacterium
chloromethanicum CM4]
Length = 703
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 64/203 (31%), Gaps = 57/203 (28%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGE----------------EAHHNAG--------- 77
R P D++G YAG+ SFG G
Sbjct: 36 AERARPRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDAT 95
Query: 78 ---GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS-----------------LHGIG 117
G FAG+N +D ++YG+E D+ + +
Sbjct: 96 TAVGGAFAGWNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVF 155
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY------ETGKAGEITPIA----IGGTAGVGV 167
G+ R R GY ++ L+YAT G A + T +G T G GV
Sbjct: 156 GAARARLGYAFGNN-LIYATAGLTGANGRVLATYPDLAGGPTATATRNVSYLGFTLGAGV 214
Query: 168 EVGGLSESLVARLEYRASKYSKV 190
+ + L ++YR S +
Sbjct: 215 QF-AVDPHLSLGIDYRYSDLGES 236
>gi|146340934|ref|YP_001205982.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193740|emb|CAL77757.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 261
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 69/221 (31%), Gaps = 50/221 (22%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ +S+AL A AAD R + YV + G Y GL+
Sbjct: 4 TALITTASVALLGLAPASAADFATRPYGK-------APPPAYVTPLPSWAGFYLGLNGGA 56
Query: 65 NGSFGEEAHHNAGG-------------------SIFAGYNVEDSCIMYGVEGDVRYTVPV 105
+ S +N GG GY + + ++G+E +T
Sbjct: 57 DWSRNCWTLNNVGGVPVAPRQSEGCHNASSGLIGGQVGYRWQAASWVFGLEAQGNWTDLK 116
Query: 106 LADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA---- 151
++ + G + GY D++L Y G VA TG A
Sbjct: 117 SSNASTAALAAGITNTTKTDAIGLFTGQVGYAW-DNVLWYVKGGAAVAHNKYTGTANAAA 175
Query: 152 --------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
+ GGT G GVE G + + +EY
Sbjct: 176 PVAVGTLLDSASETRWGGTVGTGVEY-GFAPNWSVAVEYDH 215
>gi|148255739|ref|YP_001240324.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407912|gb|ABQ36418.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 245
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 65/212 (30%), Gaps = 48/212 (22%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSA------------------LYNGSFGEEAHHNAGGSI 80
P V ++G YAG+ + G+ + G +
Sbjct: 29 PYTKAPPVVVPILSWSGIYAGIQGGGGWGTSKETFIGRFNAPGFLGTQNYNTNGGFVGGV 88
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPV---------LADNIHSLHGIGGSLRIRGGYEVSDS 131
GYN + ++ G+EGD ++ + D + G ++ R GY V
Sbjct: 89 I-GYNWQFDNLVVGLEGDYHWSDINGRSAVINAGVGDTYFTKLTSFGDIKGRLGYAV-GP 146
Query: 132 LLLYATVGPDVAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
L + + G V + G T G G E + + A+LEY
Sbjct: 147 ALFFVSGGAAVGELQHRYDRAAGVFFGQNTTRWGYTVGAGAEY-MFAPNWSAKLEYNYLD 205
Query: 187 YSKVEGFY-------------NTISLGVGMKF 205
+ K Y +T+ G+ F
Sbjct: 206 FGKSTLQYVGVPGRSEWKDSVHTVKAGLNYHF 237
>gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
Length = 185
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 18/171 (10%)
Query: 51 HDFNGPYAGLSALYNGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPV 105
HD++G Y G + S + A G I G N+++ I++G E G+
Sbjct: 17 HDWSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHR 76
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+ G+ + + GY D L+Y T G V + + G G
Sbjct: 77 IGHGGTLQQSWNGNAKGKVGYTF-DKTLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGA 135
Query: 166 GVEVGGLSESLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205
GVE LS L + EY +++ V+ ++I G+ KF
Sbjct: 136 GVE-QALSGPLSVKAEYDFQRFNDVKSQVNGIEQRNNLKNHSIKAGLNYKF 185
>gi|154246409|ref|YP_001417367.1| porin [Xanthobacter autotrophicus Py2]
gi|154160494|gb|ABS67710.1| porin [Xanthobacter autotrophicus Py2]
Length = 248
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 67/213 (31%), Gaps = 60/213 (28%)
Query: 51 HDFNGPYAGLSALYNG---------------SFGEEAHHNAGG---SIFAGYNVED-SCI 91
+ G Y G + Y G + N+ G GYN + + +
Sbjct: 38 FSWTGFYIGANVGYGGDKFTFDEVESYYGYPYYANSTSLNSSGFFAGGQIGYNYQFANNV 97
Query: 92 MYGVEGDVRYTVPVLADNIHS---------------LHGIGGSLRIRGGYEVSDSLLLYA 136
+ GVE D++++ ++ S G++R R GY D L Y
Sbjct: 98 VLGVETDLQWSGIEGKEDYSSVYVYGGYPYTSSYGASVDYFGTIRARIGYAF-DRFLPYI 156
Query: 137 TVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
T G + + + + G T G GVE ++ + + EY
Sbjct: 157 TGGAAYGKTKISSSYAGDGFGSLSASATNWGWTVGGGVEY-AITNNWTFKTEYLYVDLGS 215
Query: 190 -----------------VEGFYNTISLGVGMKF 205
V+ ++T+ GV KF
Sbjct: 216 TDYAYADGYGYYSYAGTVDTKFHTLKAGVNYKF 248
>gi|27377123|ref|NP_768652.1| hypothetical protein bll2012 [Bradyrhizobium japonicum USDA 110]
gi|27350266|dbj|BAC47277.1| bll2012 [Bradyrhizobium japonicum USDA 110]
Length = 308
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 35/210 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ + AL + + D + +P A D++G Y G
Sbjct: 68 MKKILILTACIG-ALCAAAPSFGTDLAGQPVKVKAAPLPVAA------PIIDWSGYYMGA 120
Query: 61 SALY---------NGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLA-- 107
+ + NG E H++ GG++ GY + ++YG+EG + +
Sbjct: 121 NGGWGTSHNCWDFNGITSEGCHNSTGGTVGGQIGYRWQIFNMVYGLEGQGNWADFRGSNV 180
Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGKA-----GEI 154
D + + G L GY +++LLY G V Y A G+
Sbjct: 181 STAFPTDTVGTTTDAFGLLTGHIGYAF-NAVLLYGKGGAAVTSNTYYVNSVATGTELGKN 239
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
+ GG G G EV L+ + A +EY
Sbjct: 240 NDVRWGGVLGAGAEVS-LTPNWSAGVEYNH 268
>gi|148255876|ref|YP_001240461.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146408049|gb|ABQ36555.1| putative outer-membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 237
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 35/206 (16%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG--LS 61
+ + ++ + A AAD R T A + +D++G Y G
Sbjct: 1 MKKLLLTTTALVVLASPALAADLAAR--------PYTKAPPPVMAAIYDWSGFYIGVNGG 52
Query: 62 ALYNGSFGEE-------AHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTV-------PV 105
+ + + +H ++GG+I GY + ++GVE + +
Sbjct: 53 GGWTHNTWDVVGGGREGSHDSSGGTIGGQVGYRWQMGQFVFGVEAQGNWADFAGDNQSAL 112
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIA 158
+ G + GY +++L+YA G + G
Sbjct: 113 FGTRNRTKTDAFGLFTGQVGYAF-NNVLVYAKGGAAITSNTYTITNAATGAFLGSNDNTR 171
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA 184
GG G G+E G + + +EY
Sbjct: 172 WGGVVGAGLEY-GFAPNWSLGVEYDH 196
>gi|118593217|ref|ZP_01550602.1| outer membrane protein [Stappia aggregata IAM 12614]
gi|118434108|gb|EAV40764.1| outer membrane protein [Stappia aggregata IAM 12614]
Length = 251
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 18/162 (11%)
Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDS 89
T T Y P + + GPY G + G + + +A +F GYN E S
Sbjct: 61 TYETPLYAPTPQSLWAGPYLGFEGGVSQTVTELKSGGRTKDFSRVDAAFGLFGGYNWEVS 120
Query: 90 CIMYGVEGDVRYTVPVLA------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
+ GVEG Y I + + + R G + + ++ Y ++G
Sbjct: 121 RFVLGVEGGAAYLGAREKGTHPTLGAIETGSKWTINAKARVGMPIKN-VMPYLSLGIAAT 179
Query: 144 QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
+ E +++G G GVEV + ++ R +Y +
Sbjct: 180 EHSLKANGTERNSVSVGPVLGGGVEV-AVMDAWHLRADYSLT 220
>gi|319408066|emb|CBI81720.1| Hemin-binding protein C [Bartonella schoenbuchensis R1]
Length = 287
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 77/293 (26%), Gaps = 99/293 (33%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + VS+ L + + QA + V P++ V + G Y G
Sbjct: 3 MKYLITVSAFVLLAISTVQAENGT--IPQESISVTPSVI----VTPSFSWTGFYLGGQIG 56
Query: 64 --------YNGSFGEE--------------AHHNAGGSIFAGYNVEDSC-IMYGVEGDVR 100
+G + G +AG NV + GV+ D+
Sbjct: 57 IFSNKIDLSSGYLKNDDVEKWALIRKDFMPKLSGVVGGFYAGANVSLGNSFIIGVDTDMV 116
Query: 101 YTVPVLADNIHS-----------------------------------------------L 113
+ +
Sbjct: 117 LSDKKDIKTVKINDYGQNEELRNENTARDSEGMVAASDCGIYNENIVSKIKFATYNHILK 176
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET------------GKAGEITPIAIGG 161
G+ R+R G+ +D ++ Y G Q + T IG
Sbjct: 177 QKWAGATRVRVGFA-ADHVMPYVAGGISYTQLQDVLLRSSQEQGQIVDNTVGGTGTMIGY 235
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
T G GV+ + +++ R EYR S + K N +GV KF
Sbjct: 236 TLGAGVDFVMIGNTIL-RTEYRYSDFGKKQFAKSGVEHSYKTNDFRVGVAYKF 287
>gi|163867547|ref|YP_001608746.1| hemin binding protein B [Bartonella tribocorum CIP 105476]
gi|161017193|emb|CAK00751.1| hemin binding protein B [Bartonella tribocorum CIP 105476]
Length = 544
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 47/192 (24%)
Query: 59 GLSALYNGSFGEEAHHNAGGSIFAG------YNVEDSCI-------MYGVEGDVRYT--- 102
G Y+ + H +G + + + +YG+E R
Sbjct: 355 GGGYAYSHGTSQSGGHGSGARGHNANPHSRSHGAQSTQAADKNESSVYGIEQMRRMASEL 414
Query: 103 VPVLADNIHS-----LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------------- 144
D + + GG+ R+R G+ +D + Y G Q
Sbjct: 415 GLEQGDEVETLDHTFKQNWGGATRVRIGFA-ADRFMPYLAGGIAYGQFQDTISISVKDEE 473
Query: 145 --KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGF 193
+ + T IG T G GV+ L ++++ R EYR S + K V
Sbjct: 474 GTVVSSKNLTDETKTMIGYTLGGGVDFSVL-DNVIVRAEYRYSDFGKKKFSKEKLEVNYK 532
Query: 194 YNTISLGVGMKF 205
N +GV KF
Sbjct: 533 TNDFRVGVAYKF 544
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 30/140 (21%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ S +L S +A AAD + ++ V + G Y G+ A G
Sbjct: 6 LITASIFSLISASTALAADVLIPHQPASST------SSTIVAPTFSWTGLYLGVQA---G 56
Query: 67 SFGEEAH--------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV 105
F +A G +AG N++ ++G++ D+ +
Sbjct: 57 GFSSKADLALVGQEKSFPLDKEFSPKLSGFAGGFYAGSNIDLGDSFIFGIDTDLMLSGKK 116
Query: 106 LADNIHSLHGIGGSLRIRGG 125
I ++ G
Sbjct: 117 HTKTITIGAADNITVENAVG 136
>gi|148256482|ref|YP_001241067.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146408655|gb|ABQ37161.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 236
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 73/239 (30%), Gaps = 46/239 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++FL+ ++ A AAD R + P A +++ G Y G
Sbjct: 1 MKRVFLSAVALTVL---AAPAFAADMPARTYTKAPVYTPPQAI-------YNWTGFYIGG 50
Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRY------TVPVLADNI 110
+ N G G + G++ + + G+E + +
Sbjct: 51 HLGGAFAGNNSLEGNNGRFLGGVQGGFDYQFAPNWVLGIEAQYSWMDRNTTNFGFPGATV 110
Query: 111 HSLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIG 160
S G GS+ R GY LLYA G G
Sbjct: 111 VSSTGANQLGSVTGRLGYTW-GPALLYAKGGYAWRDGNALGVNVAGVPAGFTTSGNTKDG 169
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205
T G G+E + + A+ EY+ + +T+ +GV +F
Sbjct: 170 YTVGGGLEY-MFAPNWSAKAEYQYYNFGNTTFTGGPAPVVGSRFNSDEHTVKVGVNYRF 227
>gi|83308664|emb|CAJ01572.1| outer membrane protein [uncultured bacterium]
Length = 252
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 62/228 (27%), Gaps = 75/228 (32%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAG-----------------------GSIFAGYNVE 87
+ G Y G Y S G + G GYN +
Sbjct: 15 FTWTGVYLGGQIGYAWSNGSNNFNGFDPFFNRGRGVFLDSSAGGTPNGVIGGAHVGYNYQ 74
Query: 88 --------DSCIMYGVEGDVRYTV----------PVLADNIHSLHGIGGSLRIRGGYEVS 129
S ++ G+EG V T + S I GS+R R G
Sbjct: 75 IPSWNWFSSSGVVIGLEGTVDGTSLSNTAIAVFPDGSNVSASSTANIQGSIRGRIGIAW- 133
Query: 130 DSLLLYATVGPDVAQKYETG--------------KAGEITPIAIGGTAGVGVEVGGLSES 175
D L+Y T G +G I+ G T G G++ ++ +
Sbjct: 134 DRALIYGTGGVAFGGFETNVRFNGTDFATGAPFFASGSISSTRTGWTVGGGIDY-AITNN 192
Query: 176 LVARLEYRASKYSKV------------------EGFYNTISLGVGMKF 205
EYR + + + N + +G KF
Sbjct: 193 WSIFGEYRYTNFGSIRENDFGQLPGGFTFEGSRRLQQNQVQVGFSYKF 240
>gi|156739610|gb|ABU93465.1| Omp25 [Brucella neotomae]
Length = 63
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 VKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58
Query: 172 LSESL 176
L++++
Sbjct: 59 LTDNI 63
>gi|91975275|ref|YP_567934.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91681731|gb|ABE38033.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 454
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 60/188 (31%), Gaps = 35/188 (18%)
Query: 47 VPIRHDFNGPYAGLSALYN-----------GSFGEEAH---HNAGGSIFAGYNVEDSCIM 92
P ++ G Y G + + G F E+ + G GYN + + +
Sbjct: 245 APPPANWAGLYIGGNFGGSATARNRTTATIGGFTEQFNLSPEGFIGGGQIGYNWQAANWV 304
Query: 93 YGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
+G E D + + + G+ R R GY V S LLYAT G
Sbjct: 305 FGAEADFQGSTQKDDRTAVFGSTVAYNQKLPWFGTARARLGYSV-GSTLLYATGGYAYGN 363
Query: 145 KYETGKAGEITPIAI----GGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEGFYN 195
+ G G GVE+ L + ++ EY +
Sbjct: 364 VKTNIVTPLSNETSNRSRSGYAVGGGVEMPFSLFGLLGPNWTSKTEYLYVDLGS---TTD 420
Query: 196 TISLGVGM 203
+ G+G+
Sbjct: 421 VFAGGLGV 428
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 70/229 (30%), Gaps = 49/229 (21%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ V + + S SAQAAD RA + V +D+ G Y G +
Sbjct: 4 LLVGAALVGSAVSAQAADLAVRAPY----------VKAPVAAIYDWTGFYIGGNVGVGVG 53
Query: 68 FGEEAHHNAGGSI---------------FAGYNVEDSCIM----YGVEGDVRYTVPVLAD 108
++H G + GYN + + + GVE D++ +
Sbjct: 54 RNLQSHVFPAGGVANSSYLQPQGVIGGGQIGYNWQTNSVFGPLLIGVEADIQGSGMSDGR 113
Query: 109 -------------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--- 152
N + ++R R G ++ Y T G T
Sbjct: 114 TTLNTLNGVLGTVNYNQKLDWFTTVRGRIGIA-RGPVVSYFTGGFAAGDVKTTVTEVGLV 172
Query: 153 --EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199
++ G G GVE L + ++EY + T SL
Sbjct: 173 PFNLSGTRTGWVIGSGVEA-ALGGNWTGKIEYLYLDLGNRTDVFGTQSL 220
>gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 221
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 15/186 (8%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 79
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 138
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197
Query: 192 GFYNTI 197
N I
Sbjct: 198 SQVNGI 203
>gi|316934026|ref|YP_004109008.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris DX-1]
gi|315601740|gb|ADU44275.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris DX-1]
Length = 246
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 35/179 (19%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGS----------------FGEEAHHNAGGSIFA 82
P +P +D++G Y G + + S FGE H +GG++
Sbjct: 28 PYTKAPPIIPAMYDWSGFYIGANGGWGSSRNCWDYLGTTAAPFAAFGEGCHDASGGTVGG 87
Query: 83 --GYNVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSL 132
GYN + ++GVE + ++ S G R GY ++
Sbjct: 88 QIGYNWQVGTWVFGVEAQGNWADFKGSNASLRFTDTTNESKVDAFGLFTARVGYAW-NNA 146
Query: 133 LLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
LLY G V + + + G G G+E G + + +EY
Sbjct: 147 LLYVKGGAAVTSDKYTTYRTLAGTIIDDASETRWGAAVGGGLEY-GFTPNWSFAVEYDH 204
>gi|296445958|ref|ZP_06887908.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296256476|gb|EFH03553.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 275
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 60/201 (29%), Gaps = 51/201 (25%)
Query: 53 FNGPYAGLSALYNGSFG----------------------EEAHHNAGGSIFAGYNVEDSC 90
++G Y GL+A Y ++ G GYN +
Sbjct: 41 WSGFYVGLNAGYTWDERGNVLVNSPANIWAVGASGSGALATSNDGFIGGGQIGYNYQFGQ 100
Query: 91 -IMYGVEGDVRYTVPVLADNIHSL--------------HGIGGSLRIRGGYEVSDSLLLY 135
+ GVE D++ + G++R R GY +S +LLLY
Sbjct: 101 TFVVGVEADIQGVGGSNSSATVGNFVTPVSSAITASKQLDYLGTVRGRAGYLISPTLLLY 160
Query: 136 ATVGPDVAQKYETGKAGE-------------ITPIAIGGTAGVGVEVGGLSESLVARLEY 182
T G Q + + +G TAG GVE + A+ EY
Sbjct: 161 GTGGVAYGQANLNATVTQTGLNGATGSATVGFSDTRVGWTAGGGVEWLFM-PQWSAKAEY 219
Query: 183 RASKYSKVEGFYNTISLGVGM 203
+ GV +
Sbjct: 220 LYYDLGRASASNTLAFQGVNV 240
>gi|146340932|ref|YP_001205980.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193738|emb|CAL77755.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 250
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 34/176 (19%)
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV---------LADNIH 111
+ + G+ + + G + GYN + I++G+EGD + D
Sbjct: 70 AVGFAGTQRYDINGGFAGGVI-GYNWQVDNIVFGLEGDYHWADISGRSTEINLGAGDTYF 128
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------EITPIAIGGTA 163
+ G ++ R G+ + L + + G V AG + G T
Sbjct: 129 TKLRGFGDIKGRLGWA-AGPALFFVSGGAAVGDLQHRYDAGLFGPAFSASQSDWRWGWTI 187
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFY--------------NTISLGVGMKF 205
G G E +++ A++EY + K Y +T+ +GV F
Sbjct: 188 GAGAEY-MFAQNWSAKVEYNYLDFGKSTLQYTPVAANRSEWNDTVHTVKVGVSYHF 242
>gi|163867546|ref|YP_001608745.1| hemin binding protein A [Bartonella tribocorum CIP 105476]
gi|161017192|emb|CAK00750.1| hemin binding protein A [Bartonella tribocorum CIP 105476]
Length = 290
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD------------VAQKYETGKAGEI 154
++ + G+ R+R G+ +D ++ Y G VA K + + +
Sbjct: 172 SEGVGFKQKWAGATRVRVGFAAADRIMPYVAGGVAYTQLEAAHGQVKVADKTFSAGSSDE 231
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205
T +G T G G++ ++++++ R EYR S Y K + F N +GV KF
Sbjct: 232 TATMVGFTIGGGIDF-AMTDNVLLRAEYRYSDYGKKKFFAKEKEYNFKTNDFRVGVAYKF 290
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 16/85 (18%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH---------------HNAGGSIF 81
++P + G Y G S + G +
Sbjct: 26 IIPHEVAPVITAPSFSWTGFYIGGQIGGFSSKIDLKDKDKDTSVFKDLSPKLSGLIGGFY 85
Query: 82 AGYNVEDSC-IMYGVEGDVRYTVPV 105
AG N + I+ GVE DV ++
Sbjct: 86 AGSNFDLGNGIILGVETDVIWSGKK 110
>gi|316932401|ref|YP_004107383.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600115|gb|ADU42650.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Rhodopseudomonas palustris DX-1]
Length = 235
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 39/202 (19%)
Query: 39 PTIATNRYVP-IRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE 87
P Y P +++ G Y G G+F + G G + AGY+ +
Sbjct: 28 PYTKAPAYAPAPIYNWTGFYIGGHIG--GAFSGDNSIGTGVTASDNGKFLGGVQAGYDWQ 85
Query: 88 D-SCIMYGVEGDVRYTVPVLA-----DNIHSLHGIG------GSLRIRGGYEVSDSLLLY 135
+ GVEG + D + + + S+ R GY LLY
Sbjct: 86 FAPNWVLGVEGQYSWLSGTNQSVAFVDGLGNSYLFSDNQRGLASVTGRLGYTW-GPALLY 144
Query: 136 ATVGPDVAQ----KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV- 190
G A G + G T G G+E + + ++EY+ + V
Sbjct: 145 VKGGWAYADYSTSLTVNGFGVAVDSKTDGYTVGGGLEYL-FAPNWSGKIEYQYYDFGNVN 203
Query: 191 -------EGFYNTISLGVGMKF 205
+ + + G+ +F
Sbjct: 204 LGNGFSAKNDEHVVKAGLNYRF 225
>gi|148255736|ref|YP_001240321.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407909|gb|ABQ36415.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 248
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 16/146 (10%)
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI---------HSL 113
+ G+ + + G + GYN + I++G+EGD + + +
Sbjct: 72 GFAGTQRYDINGGFAGGVI-GYNWQVDNIVFGLEGDYHWADINGRSGVITAGLGDSYFTK 130
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI----GGTAGVGVEV 169
G ++ R G+ + L + + G V + I G T G G E
Sbjct: 131 LRGFGDIKGRLGWA-AGPALFFVSGGAAVGDLQHRYDNPAFSTIQNDWRWGWTIGAGAEY 189
Query: 170 GGLSESLVARLEYRASKYSKVEGFYN 195
+ + A++EY + K YN
Sbjct: 190 -MFAPNWSAKVEYNYLDFGKSTLQYN 214
>gi|126729809|ref|ZP_01745622.1| outer membrane protein, putative [Sagittula stellata E-37]
gi|126709928|gb|EBA08981.1| outer membrane protein, putative [Sagittula stellata E-37]
Length = 220
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 70/212 (33%), Gaps = 24/212 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K L + V+ AL + SA + D T ++ G Y GL
Sbjct: 26 MKKHILTMTVAIAALGTAASAGSLDVTPVEPAPM-----TPVEVVPAAPVGNWTGGYTGL 80
Query: 61 S-ALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIGG 118
S S G + GY+ + I+ G E + + + +
Sbjct: 81 SLGGAQASSGGSEESGMIYGLHGGYDYQFGNGIVLGGEAEFQGNNDLSVNGFDV--DNVS 138
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178
+ R GY++ L+Y T G GE T G+G+E +++
Sbjct: 139 RAKARMGYDL-GQALVYGTAGVS----KVNTSIGEATSPVY----GLGMEY-KVTDKFSV 188
Query: 179 RLEYRASKYS-----KVEGFYNTISLGVGMKF 205
EY + + +++SL +F
Sbjct: 189 GAEYLNEDFQDLGSTNTDLQQDSLSLRGNFRF 220
>gi|312113917|ref|YP_004011513.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
gi|311219046|gb|ADP70414.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
Length = 292
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 66/251 (26%), Gaps = 80/251 (31%)
Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-------- 66
+ + SA AAD R G + G Y G
Sbjct: 1 MVAGNSALAADLYGRGGGLKDGPFYEAPAL--------WQGFYLGGHVGAAWSKADVDDT 52
Query: 67 --------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-------- 110
G+ + G GYN + ++GVEGD+ Y + ++
Sbjct: 53 FIYVGDPTYKGDLNTTSLTGGGQLGYNFQRGNFVFGVEGDIGYLKVDASKDVAFRPTSCV 112
Query: 111 -----------------------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY- 146
+ + G + R GY D L YA G
Sbjct: 113 GTYTSAPYTVNYDPKMCAVDTKYSASGDLYGDITGRLGYAF-DRTLFYAKGGVAFLNGEF 171
Query: 147 ----------------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
+ + +G T GVGVE L+ S + EY+
Sbjct: 172 DAKYLGQNCASLGSDSHCLGNALSKFDYSHSETLVGWTIGVGVEY-KLTPSWSLKAEYQH 230
Query: 185 SKYSKVEGFYN 195
+ + YN
Sbjct: 231 FNFGSISYSYN 241
>gi|91975321|ref|YP_567980.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91681777|gb|ABE38079.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 242
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 50/211 (23%)
Query: 39 PTIATNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNV 86
P Y P +++ G Y G G+F + G G + AGY+
Sbjct: 28 PYNKAPVYAPPVPIYNWTGFYIGGHIG--GAFAGDNSIGTGVTANSDGKFLGGVQAGYDW 85
Query: 87 ED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG--------------GSLRIRGGYEVSDS 131
+ + GVEG +Y+ +++ + +G S+ R GY
Sbjct: 86 QFAPSWVLGVEG--QYSWLSGSNDAVAFTVVGQPGTYTFSDNQRGLASVTGRLGYTW-GP 142
Query: 132 LLLYATVGPDVAQKYET---------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
LLY G A + T G T G G+E +++ ++EY
Sbjct: 143 ALLYVKGGWAYADYKSSLTFTAPGGAAVGVSSTSSQDGYTVGAGLEYL-FAQNWSGKIEY 201
Query: 183 RASKYSKVE--------GFYNTISLGVGMKF 205
+ + V+ + + G+ +F
Sbjct: 202 QYYDFGNVDLGAGFTAKNDQHVVKAGLNYRF 232
>gi|156739632|gb|ABU93476.1| Omp25 [Brucella neotomae]
Length = 63
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
GI GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E
Sbjct: 1 VKQGIEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58
Query: 172 LSESL 176
L++++
Sbjct: 59 LTDNI 63
>gi|86749831|ref|YP_486327.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572859|gb|ABD07416.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 243
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 32/186 (17%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSF---------------GEEAHHNAGGSIFA 82
T A + +D++G Y G + + S G A
Sbjct: 28 PYTKAPPPMIVAIYDWSGFYIGANGGWGTSRKSWDFYAPGALLLSEGSHDASGATAGGQV 87
Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLL 134
GYN + ++GVE + ++ + HS G R GY ++ LL
Sbjct: 88 GYNWQMGSWVFGVEAQGNWADFKGSNVTLLGGLFDNHSKVEAFGLFTGRVGYAW-NNALL 146
Query: 135 YATVGPDVAQKY-------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
YA G V + G + G + G G+E G + + +EY
Sbjct: 147 YAKGGAAVVNDKYEFVRRADGLVTGTASETRWGASVGAGLEY-GFTPNWSFAVEYNHLFL 205
Query: 188 SKVEGF 193
K +
Sbjct: 206 DKKDVT 211
>gi|319408046|emb|CBI81700.1| Outer membrane protein, omp25/ropB family [Bartonella
schoenbuchensis R1]
Length = 273
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 78/272 (28%), Gaps = 89/272 (32%)
Query: 3 KLFLAVGVSSLALASFCSAQAA--DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+ + + +L L S +A+ ++ +VP + G Y G
Sbjct: 1 MIRCLIIICALTLFSTSVVRASGYMVIQE------------PMPVFVPSTFSWEGLYLGG 48
Query: 61 SAL------------YNGSFGEEAHH-----------NAGGSIFAGYNVE--DSCIMYGV 95
+G G +AG N+ D+ ++ V
Sbjct: 49 QVGGALGKLSVSSRVISGKNTVTKKSQIVSSDKYNLAGFIGGFYAGSNLRLDDNGLILSV 108
Query: 96 EGDVRYT--------------------------------------VPVLADNIHSLHGIG 117
+ D+ ++ + N
Sbjct: 109 DTDIVWSNQKNVQFGKRMIVGDQSARVHNALVSRFGHKKSGLVKVGDEVTYNTTRKEKWA 168
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAGVGV 167
G+ R+R G+ +D ++ Y G + T IG T G GV
Sbjct: 169 GATRVRFGFA-ADRIMPYIAGGIAYTKVQITPWFLVNSANPLNLMTEKKAMIGYTLGAGV 227
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISL 199
+S++++ R EYR S + K + + +++
Sbjct: 228 NF-AVSDNVILRGEYRYSDFGKKKFMESPVNV 258
>gi|39935882|ref|NP_948158.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39649736|emb|CAE28257.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 288
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 37/194 (19%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF----------------GEEAHHNAGG--SI 80
P + +D++G Y G + + S GE H +GG
Sbjct: 64 PYTKAPPIIAAAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGG 123
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSD 130
GYN + S ++GVE + ++ + G R GY +
Sbjct: 124 QVGYNWQISTWVFGVEAQGNWADFKGSNANLLVIPAPTTNQTKIDAFGLFTARVGYAW-N 182
Query: 131 SLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183
+ L+Y G V + + + G T G G+E G + S +EY
Sbjct: 183 NALIYVKGGAAVTSDKYTRFRTATGVFNDDASETRWGATVGTGLEY-GFTPSWSFAVEYD 241
Query: 184 ASKYSKVEGFYNTI 197
+ ++ +
Sbjct: 242 HLFLGGRDLTFSPV 255
>gi|154246408|ref|YP_001417366.1| porin [Xanthobacter autotrophicus Py2]
gi|154160493|gb|ABS67709.1| porin [Xanthobacter autotrophicus Py2]
Length = 250
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 45/189 (23%)
Query: 51 HDFNGPYAGLSALYNG--------------------SFGEEAHHNAGGSIFAGYNVED-S 89
+ G Y G + Y G + GYN + +
Sbjct: 38 FSWTGFYIGANVGYGGDKFTFDEVESYYYGAYPYYANSTSLNSSGFFAGGQIGYNYQFAN 97
Query: 90 CIMYGVEGDVRYTVPVLADNIHS---------------LHGIGGSLRIRGGYEVSDSLLL 134
++ GVE D++++ ++ S G++R R GY D L
Sbjct: 98 NVVLGVETDLQWSGIEGKEDYSSVYIYGGYPYTSSYGASVDYFGTIRARIGYAF-DRFLP 156
Query: 135 YATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
Y T G + +G + + + G T G GVE ++ + + EY
Sbjct: 157 YITGGAAYGKTKVSGSYAGEGFGSFDSSSTNWGWTVGGGVEY-AITNNWTFKTEYLYVDL 215
Query: 188 SKVEGFYNT 196
+ Y +
Sbjct: 216 GSTDYTYGS 224
>gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1]
gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1]
gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
Length = 211
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 15/186 (8%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73
SA AAD + + V HD++G Y G + S +
Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 69
Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
A G I G N+++ I++G EG+ + G+ + + GY D
Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L+Y T G V + G G GVE LS L + EY +++ V+
Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187
Query: 192 GFYNTI 197
N I
Sbjct: 188 SQVNGI 193
>gi|163868669|ref|YP_001609878.1| hemin binding protein E [Bartonella tribocorum CIP 105476]
gi|161018325|emb|CAK01883.1| hemin binding protein E [Bartonella tribocorum CIP 105476]
Length = 309
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 21/112 (18%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-----------GKAGEITPIAIGG 161
G+ R+R G + ++ Y G Q + K ++T +G
Sbjct: 200 KQKWTGATRVRLGLS-AHRVMPYIAGGIAYGQFQDVLSTVITGDESFNKTSDVTKTMVGY 258
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGMKF 205
T G GV+ ++++LV R EYR S + K + N G+ KF
Sbjct: 259 TLGGGVDF-AMTDNLVVRAEYRYSDFGKKKFKDEIEIKYKTNDFRAGIAYKF 309
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 36/148 (24%), Gaps = 36/148 (24%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYNG 66
+ S +L S QAAD V + + ++G Y G ++
Sbjct: 6 ITASVFSLISPSILQAADVVAPEEPVH------VVSEVVTSSDFSWSGFYFGGQIGGFSS 59
Query: 67 SFGEEAHH----------------------------NAGGSIFAGYNVEDS-CIMYGVEG 97
G ++AG N + ++ G++
Sbjct: 60 KISGTTRDVDTPLYPDEESKNKPWVPLEKQYKPELSGFVGGLYAGVNFDLGNNLIVGLDT 119
Query: 98 DVRYTVPVLADNIHSLHGIGGSLRIRGG 125
D+ T S G
Sbjct: 120 DILLTEKKDTKTFIHTEESSASGSGTEG 147
>gi|27380404|ref|NP_771933.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353568|dbj|BAC50558.1| bll5293 [Bradyrhizobium japonicum USDA 110]
Length = 277
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 73/247 (29%), Gaps = 69/247 (27%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K LAV + + S QAAD + +++ G Y G
Sbjct: 1 MKKFLLAV---ASVVLGTASVQAADLAAHYTKAPM-----------MAPAYNWTGFYVGG 46
Query: 61 SALYNGSFGEEA----------------------------HHNAGGSIFAGYNVEDSCIM 92
+ + + + G AGYN + + +
Sbjct: 47 NVGGQWGSSDPSTSTVFSPTGYFAASSVPAINTVGAQGINSSSVTGGFTAGYNWQVNHAV 106
Query: 93 YGVEGDVRYTVPVLAD----------------NIHSLHGIGGSLRIRGGYEVSDSLLLYA 136
G+EGD+ Y + + ++R R G+ + + LLYA
Sbjct: 107 LGLEGDINYFGFKGSATGSALYPCCAPTGFTVSSSVSADWLATIRGRIGFLAAPTWLLYA 166
Query: 137 TVGPDVAQKYET----------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
T G +A+ ++ I +G TAGVG E + EY
Sbjct: 167 TGGAAIAEVKGNFNFTDTFAGATESSAIRDTRLGWTAGVGTEY-AFGGGWSLKAEYLYVD 225
Query: 187 YSKVEGF 193
+
Sbjct: 226 LGRASAT 232
>gi|86751658|ref|YP_488154.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86574686|gb|ABD09243.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 238
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 62/201 (30%), Gaps = 40/201 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVED-S 89
+++ G Y G G+F + G G + GY+ +
Sbjct: 32 APVYAPPAPIYNWTGFYIGGHIG--GAFAGDNSIGTGVTAGSDGKFLGGVQVGYDWQFAP 89
Query: 90 CIMYGVEGDVRYTVPVLADNIHSLHGIGG------------SLRIRGGYEVSDSLLLYAT 137
+ GVEG + ++ G+ G S+ R GY LLY
Sbjct: 90 SWVLGVEGQYSWLSGTNDAVSFTVPGVAGTYTYADNQRGLASVTGRLGYTW-GPALLYVK 148
Query: 138 VGPDVAQ-----KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191
G A T G T G G+E +++ ++EY+ + V+
Sbjct: 149 GGWAYADYTSSLTLSGVGTVSSTSSQDGYTVGGGLEYL-FAQNWSGKIEYQYYDFGNVDL 207
Query: 192 -------GFYNTISLGVGMKF 205
+ + G+ +F
Sbjct: 208 GAGFTAKNDQHVVKAGLNYRF 228
>gi|27377055|ref|NP_768584.1| hypothetical protein bll1944 [Bradyrhizobium japonicum USDA 110]
gi|27350198|dbj|BAC47209.1| bll1944 [Bradyrhizobium japonicum USDA 110]
Length = 825
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 68/231 (29%), Gaps = 61/231 (26%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------H 74
D + +G P + ++ G Y G + A
Sbjct: 598 DTAQAKANGIDKEPPPVMPT-------NWAGVYLGGTIGAGKGRSHYADPFPTPVSGDYA 650
Query: 75 NAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPVLADNIHSLH-------GIG------- 117
+ GG++F G N + + G+E Y V N G
Sbjct: 651 DLGGAMFGGQIGINYQTGSWVLGLEAS-GYWANVQGTNTCFGAFPSPQIAGFNCGSQIDA 709
Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-------GGTAGVGVEV 169
G+L R GY D LLY G ++ G I+ + G T G G+E
Sbjct: 710 LGALTGRVGYAF-DRTLLYVKGGSAWDRQTNQFNTGGISGTILTNGNTNWGWTVGGGLEY 768
Query: 170 GGLSESLVARLEYRASKYSKV----------------EGFYNTISLGVGMK 204
L + LEY+ + K T+SLGV K
Sbjct: 769 -ALLPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYK 818
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 60/221 (27%), Gaps = 53/221 (23%)
Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSAL---------- 63
+ A AAD V T P ++ G Y G
Sbjct: 71 AGLYGPAHAADLP----------VKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQT 120
Query: 64 ---------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE-----GDVRY--TVPVLA 107
G G G G N + + G+E DV A
Sbjct: 121 ATGLQADFSNRGFPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANRA 180
Query: 108 DNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------E 153
DN + + G++ R G + LL+Y G A +
Sbjct: 181 DNRYGVISFTCDNRVTSLGTIAGRLGQTWGN-LLIYGKAGAAWATDESDARTSHYINKFN 239
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G G+G+E S +L A +EY + + Y
Sbjct: 240 QSGTRWGWMGGLGLEY-AFSPNLSAFVEYDHFDFGSKDSNY 279
>gi|146339995|ref|YP_001205043.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146192801|emb|CAL76806.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 237
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 74/238 (31%), Gaps = 47/238 (19%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+ AV +++LA+ A AAD R + + P A +D+ G Y G
Sbjct: 3 RVFLSAVALTALAV----PAFAADMPARTYTKAPPMTPPQAI-------YDWTGFYIGGH 51
Query: 62 ALYNGSFGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRY------TVPVLADNIH 111
+ G N G + G++ + + G+E + +
Sbjct: 52 LGGAFAGGNGLEGNNARFLGGVQGGFDYQFAPNWVLGIEAQYSWMDRNTTNFGFPGATVV 111
Query: 112 SLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGG 161
+ G GS+ R GY LLYA G G
Sbjct: 112 TSTGANQLGSVTGRLGYTW-GPALLYAKGGYAWRDGNGLGVNVAGVPAGFTTSGNAKDGY 170
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGF--------------YNTISLGVGMKF 205
T G G+E + + A+ EY+ + +T+ +GV +F
Sbjct: 171 TVGAGLEY-MFAPNWSAKAEYQYYNFGNTTFTGGPAPVVGSRFNNEDHTVKVGVNYRF 227
>gi|312114546|ref|YP_004012142.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219675|gb|ADP71043.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 250
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 80/224 (35%), Gaps = 41/224 (18%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ L + + A+A SA AAD R GG P +AT + G YAG++
Sbjct: 1 MIRLGIIGTVSAIALTVSANAADLYRAPAGGGLKDAPYVAT---------WTGFYAGVNG 51
Query: 63 LYNGSFGEE--------------AHHNAGGSIFAGYNVE---DSCIMYGVEGDVRYTVPV 105
Y S + + G GYN++ ++ G+E D++ +
Sbjct: 52 GYAWSQSSDQLAYVDPNYPFYGLSPEGGFGGGQIGYNLQGFVHPNLVLGIEADIQGSDIS 111
Query: 106 LAD------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------- 152
+ S G++R R GY + DS L+YAT G A
Sbjct: 112 DSGVDSATYKYSSKVDWFGTVRGRLGYAI-DSALVYATGGFAYGGIKNDYDARHLGAGEF 170
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
+ A G G GVE L+ + + EY+ K +
Sbjct: 171 KFDGNATGYVVGGGVEY-KLAPAWSLKAEYQYINLGKNNPVDTS 213
>gi|316933367|ref|YP_004108349.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1]
gi|315601081|gb|ADU43616.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1]
Length = 240
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 72/238 (30%), Gaps = 41/238 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M + + ++ +A A AAD P + + +++ G Y G
Sbjct: 1 MTTMKNTLLGAAAVIALSAPAFAADLP---PRPYTKAAPAYTAPQ---VVYNWTGFYVGG 54
Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGI 116
+ N+G G + G + + + + G+E + I
Sbjct: 55 HVGGAWAGDNSIPGNSGRFFGGVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGST 114
Query: 117 G-------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--------GG 161
GS+ R GY L+YA G P A G
Sbjct: 115 AVEDTRGLGSVTGRLGYAW-GPTLVYAKGGYAWRDSDLGVATAAGFPAAYTTSGSRNDGY 173
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205
T G G+E + S A++EY+ K+ +T+ G+ +F
Sbjct: 174 TVGAGLEYL-FAPSWSAKVEYQYYKFGDTTFTGGPADVVGTSFRNDEHTVKAGINYRF 230
>gi|148258469|ref|YP_001243054.1| hypothetical protein BBta_7274 [Bradyrhizobium sp. BTAi1]
gi|146410642|gb|ABQ39148.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 693
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 76/231 (32%), Gaps = 68/231 (29%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG--------------------- 78
+ V D+ G Y G Y + A G
Sbjct: 35 PLPVQASVSSIFDWTGFYVGTHFGYAAGASNWSATQADGSAPRLMGRLDFYPQYDAFKGT 94
Query: 79 -----SIFAGYNVEDSC-IMYGVEGDVRYTVPVLAD-------NIHSLHG----IGGSLR 121
+ AGYN + + ++ GVE D+ + V A + +G GS+R
Sbjct: 95 GSFSSGLQAGYNYQAASRLLLGVEADISFPNSVSATQTFSTTLGDQASYGETVLHAGSVR 154
Query: 122 IRGGYEVSDSLLLYATVGPD---------------VAQKYETGKAGEITPIAIGGTAGVG 166
R GY D+ L+Y T G + G + + +G AG G
Sbjct: 155 GRVGYAF-DNWLVYGTGGFGWSFDQFTRTQLMGSPMGGSAVPGTLEKHSLWRLGWVAGAG 213
Query: 167 VEVGGLSESLVARLEYRASKYSKV-------------EGFYNTISLGVGMK 204
VE+ ++ S A+LEY S++ + ++I LG+ +
Sbjct: 214 VELP-VAPSWTAKLEYLLSEFGGQSISFPAGAQKFEGDYASHSIRLGLNYQ 263
>gi|91977701|ref|YP_570360.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91684157|gb|ABE40459.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 237
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 41/231 (17%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ ++ A A AAD G R + +++ G Y G + +
Sbjct: 5 LLSAAAVFALTAPAFAADL------GPRTYTKAPPVYTPPEVVYNWTGFYIGGNVGGAFA 58
Query: 68 FGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------ 117
+AG G + G++ + + G+E + + L +
Sbjct: 59 GSNNIQSDAGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVLFPLGSVATENTRG 118
Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--------GGTAGVGVE 168
GS+ R GY LLYA G A G T G G+E
Sbjct: 119 LGSVTGRLGYSW-GPALLYAKGGYAFRDSSLGVNTAAGVQSAYTTSGNRNDGYTVGAGLE 177
Query: 169 VGGLSESLVARLEYRASKYSKVE--------------GFYNTISLGVGMKF 205
+ S A++EY+ K+ +T+ G+ +F
Sbjct: 178 Y-MFAPSWSAKVEYQYYKFDNTSFTGGPADVVGTTFRNDDHTVKAGINYRF 227
>gi|323136580|ref|ZP_08071661.1| FecR protein [Methylocystis sp. ATCC 49242]
gi|322397897|gb|EFY00418.1| FecR protein [Methylocystis sp. ATCC 49242]
Length = 438
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 49/164 (29%), Gaps = 29/164 (17%)
Query: 52 DFNGPYAGLSALYNGSFGEEAH------HNAGGSIFAGYNVED-SCIMYGVEGDVRYTVP 104
++ G G + E A G + GYN + I+ G E D Y
Sbjct: 231 NWGGLSIGFNVGTAIGNAEFADPVPMNGVGFLGGLKLGYNWQVLPNIVAGFETDAEYRSE 290
Query: 105 VLADNIHSLH------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG--------- 149
+ G G+ R R GY + L+Y T G
Sbjct: 291 IGGSTNGHGTVSSTRGGYLGTFRGRLGYAF-NRWLVYGTGGLAYGHIIAPRTFSGANLLG 349
Query: 150 -----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
+ P G T G GV+ L+ ++ + EY K
Sbjct: 350 PAYAFGTSQNNPFLAGWTVGGGVQF-ALTSNISVKAEYLYVKLQ 392
>gi|75677151|ref|YP_319572.1| hypothetical protein Nwi_2970 [Nitrobacter winogradskyi Nb-255]
gi|74422021|gb|ABA06220.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 276
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 89/289 (30%), Gaps = 97/289 (33%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L LA + A A AAD P+++T R V + G Y G
Sbjct: 1 MRRLLLAAVICGAA----HGAYAADMPDDFPFLRGSQPPSLSTVRTV-----WQGFYIGG 51
Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88
A Y + G ++ N+G F GYN++
Sbjct: 52 QASYGSADMDFKNSGKDLLERLLNHVDVESQFNLSSWPLGGTSSNRNSGFGGFLGYNLQM 111
Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIG------------------------GSLRIRG 124
+++GVE YT G GSLR+R
Sbjct: 112 EDVVFGVEA--NYTHSKFLGASSGSQGRSFSYPADYRTSAFVQSNASMQIMDFGSLRVRA 169
Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAG---------------------------EITPI 157
GY + S L YA G + Q A
Sbjct: 170 GYSL-GSFLPYAFGGVAMGQANIRRNASYNLHYQYVGTQIPPLPNLAGGGSLSDNANAHF 228
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205
G AG+G++ + + L R E+ +++ V+ NT+ G G +F
Sbjct: 229 IYGYAAGLGID-MMIVDGLFLRAEWEFLRFTAPVDTIVNTVRAGAGYRF 276
>gi|83308663|emb|CAJ01571.1| outer membrane protein [uncultured bacterium]
Length = 276
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 72/246 (29%), Gaps = 67/246 (27%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M + FL V ++AL +A AAD RA P I + G Y G
Sbjct: 1 MYRKFLLASVGAIALTG-SAAFAADLPSRAPPPVYLPPPPI---------FTWTGFYIGG 50
Query: 61 SALYNGSFGEEAHHNAG--------------------GSIFAGYNVE--------DSCIM 92
G + G G++ + S ++
Sbjct: 51 QVGGAWGTGGSSFTAFDAVTGRFVDASFGGGNPSGVIGGGHIGFDYQIPTWNWFSSSGVV 110
Query: 93 YGVEGDVRYTVPVLADNI--------------HSLHGIGGSLRIRGGYEVSDSLLLYATV 138
GVEG V + + + I GS+R R G D +L+YAT
Sbjct: 111 IGVEGSVDGSSLSKTTTVTLPGIFLNNGFATARTSADIQGSIRGRLGIAW-DRVLVYATG 169
Query: 139 GPDVA--------QKYETGKAG-----EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
G + + G T G G+E L+ + EYR +
Sbjct: 170 GVAFGGINSDIQVNGVDAAGVPFFGQRNRSNDRTGWTVGGGIEY-ALTPNWSVGAEYRFT 228
Query: 186 KYSKVE 191
+ +
Sbjct: 229 DFGTIS 234
>gi|49473905|ref|YP_031947.1| hemin binding protein b [Bartonella quintana str. Toulouse]
gi|21689905|gb|AAM68130.1| hemin-binding protein B [Bartonella quintana]
gi|49239408|emb|CAF25746.1| Hemin binding protein b [Bartonella quintana str. Toulouse]
Length = 453
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 41/181 (22%)
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIM-------YGVE------GDVRYTVPVLADNI 110
++ + GGS AG + + + YG+E + A+ +
Sbjct: 275 HSHRVNNPHGNPHGGSSAAGRSAQGEQTVNEKSASVYGIEEVKKVAASLGVDQGGRAETL 334
Query: 111 HS--LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---------------E 153
G+ R+R G+ +D ++ Y G Q +
Sbjct: 335 THTLKQNWAGATRLRIGFA-ADRIMPYVAGGIAYTQLQDIVSISLKEQDGEAVSRKNLTN 393
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMK 204
T IG T G G++ ++++++ R EYR S + K V N +GV K
Sbjct: 394 ETKTMIGYTLGGGIDF-AMTDNVLLRAEYRYSGFGKKKFAKEKLEVNYKTNDFRIGVAYK 452
Query: 205 F 205
F
Sbjct: 453 F 453
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ VS AL S +AQAAD G + + G YAG+ G
Sbjct: 6 LITVSIFALVSASAAQAADV------GIPHQSAPTSLPVIAAPAFTWTGFYAGIQI---G 56
Query: 67 SFGEEAHHNAGG--------------------SIFAGYNVEDS-CIMYGVEGDVRYTVPV 105
F + + G ++AG N++ ++ ++ D+ ++
Sbjct: 57 GFSSKTDMSIVGKGKSVLLSKDLLPKLSGFESGLYAGSNIDLGDNFIFNIDTDLIWSGQK 116
Query: 106 LADNIHSLHGIGGSL-----RIRGGYEVSDSLL 133
I S+ R R + + LL
Sbjct: 117 YTKTIALGASDNVSVDNLVTRSRRSLRLENQLL 149
>gi|115526777|ref|YP_783688.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115520724|gb|ABJ08708.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris BisA53]
Length = 228
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 29/190 (15%)
Query: 43 TNRYVP-IRHDFNGPYAGLSAL--------YNGSFGEEAHHNAGGSIFAGYNVED-SCIM 92
Y P +++ G Y G G + GY+ + +
Sbjct: 31 APAYAPAPIYNWTGFYIGGHIGGAFVGDDSIATGVTRNNDGTFLGGVQGGYDYQFAPNWV 90
Query: 93 YGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYATVGPDVAQ-- 144
+G+E + + + GS+ R GY LLYA G A
Sbjct: 91 FGIEAQYSWLDSGTDPVLVGAYSFSDKQKGLGSVTGRIGYTW-GPALLYAKGGYAFADYD 149
Query: 145 --KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE-------GFYN 195
G ++ + G T G G+E + S A++EY+ + V+ +
Sbjct: 150 TTVTLGGVGAAVSSKSDGYTVGGGLEYL-FAPSWSAKVEYQYYDFGNVDFGTFSVKNDEH 208
Query: 196 TISLGVGMKF 205
+ G+ +F
Sbjct: 209 VVKAGLNYRF 218
>gi|49475068|ref|YP_033109.1| hemin binding protein b [Bartonella henselae str. Houston-1]
gi|49237873|emb|CAF27069.1| Hemin binding protein b [Bartonella henselae str. Houston-1]
Length = 391
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 41/191 (21%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCI-------MYGVE---GDVRYTV 103
NG Y ++ A + G AG + + + +YG+E +
Sbjct: 203 NGAYPHSMGAHSHVANPHASNPHGTQNMAGRTTQSTKVAEKNASGIYGIEQVKKEAYEHG 262
Query: 104 PVLADNIHS-----LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE----------- 147
N+ + G+ R+R G+ V D ++ Y G AQ ++
Sbjct: 263 LSQYGNVETLSHTLKQNWAGATRVRVGFSV-DRVMPYFAGGIAYAQLHDTISISIKKNDE 321
Query: 148 ----TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------- 194
+ + IG T G GV+ ++++++ R EYR S + K +
Sbjct: 322 SVVTSKNLTDEKKTMIGYTLGGGVDF-AMTDNVLLRAEYRYSDFGKKKFAKEKLEINYKT 380
Query: 195 NTISLGVGMKF 205
N +GV KF
Sbjct: 381 NDFRVGVAYKF 391
Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 30/135 (22%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ VS AL + +A AAD G A+ + G YAG+ A G
Sbjct: 6 LITVSIWALIAASTAHAADV------GIPRQSVLAASPVITAPTFTWTGFYAGIQA---G 56
Query: 67 SFGEEAH--------------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPV 105
F + G +AG N+ ++GV+ D+ +
Sbjct: 57 GFSSKTDLSIVGKDKTVPLSKDLSPKLSGFEGGFYAGSNINLGDDFIFGVDTDLTLSGQK 116
Query: 106 LADNIHSLHGIGGSL 120
I ++
Sbjct: 117 HTKTIIIGVDDNAAV 131
>gi|110633591|ref|YP_673799.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110284575|gb|ABG62634.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 234
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 57/207 (27%), Gaps = 39/207 (18%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG------------- 66
SA AAD V D+ G Y G +
Sbjct: 16 SAFAADAVYGDVPAAPVA-------EVAAESFDWTGLYLGAFGGVSTGDFKYEAGPTGGD 68
Query: 67 --SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT----------VPVLADNIHSLH 114
+ + G GY+ + + G D+ T + S
Sbjct: 69 PLGGIDISGGGFIGGAQVGYDWQIGNWVIGGVADIAATNHDADISADIDGFGSAEAESKL 128
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITPIAIGGTAGVGVEV 169
G++R R GY D L+Y G + + G + G TAG GVE
Sbjct: 129 KYLGTVRARAGYSF-DRTLVYGHGGFAYGETEQKIDLGGTELFNESQGRTGWTAGAGVEF 187
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNT 196
++ + EY + F +
Sbjct: 188 -AVTNRISVGTEYSYVDLGEERVFEDA 213
>gi|319409089|emb|CBI82733.1| Hemin binding protein b [Bartonella schoenbuchensis R1]
Length = 367
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 25/115 (21%)
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE--------------TGKAGEITPIAI 159
G+ R+R G+ V+D ++ Y VG AQ + + + T + +
Sbjct: 255 QKWSGATRMRIGF-VADRIMPYIAVGVTYAQLQDIFSRSVEVAGKEINSFNLSDETKMMV 313
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205
G T G G++ ++++++ R+EYR S + K ++ N +GV KF
Sbjct: 314 GYTLGGGIDF-AMADNVILRVEYRYSDFGKQKFAKDKLELDYKTNDFRVGVAYKF 367
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 34/123 (27%), Gaps = 25/123 (20%)
Query: 7 AVGVSSLALASFCSAQAAD---PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA- 62
V S L + QAAD P ++ + ++G Y G
Sbjct: 6 LVSTSIFTLFTASMTQAADIRIPRESRPVVAPVEASSVVSPVIAAPIFSWDGFYLGGQIG 65
Query: 63 --------------LYNGSFGEEAHH------NAGGSIFAGYNVEDSC-IMYGVEGDVRY 101
+ + G ++AG NV + GV+ D+ +
Sbjct: 66 GFSSKSDRSLYAKQGSSREWAPVGKDALPQLSGFMGGLYAGANVSLGNSFVLGVDTDIAW 125
Query: 102 TVP 104
+
Sbjct: 126 SNK 128
>gi|319407469|emb|CBI81119.1| Hemin binding protein d [Bartonella sp. 1-1C]
Length = 270
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 77/276 (27%), Gaps = 87/276 (31%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYNG 66
+ S L S AQA D V + P + + + G Y G ++G
Sbjct: 4 LTASVFTLFSISIAQATDFV--IPYQSHTDSPFV-----LSSAFSWQGFYFGARIGGFSG 56
Query: 67 SFGEEAHH-------------------NAGGSIFAGYNVEDSCI-MYGVEGDVRYTVPVL 106
G ++AG ++ I + G + +V ++
Sbjct: 57 PITSSIMDENNVERNIIFQDQSSPKLSGVVGGLYAGLDINIHNIFVVGCDTNVDWSGVKD 116
Query: 107 ADNIHS-------------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
I ++R R G+ D ++ Y G
Sbjct: 117 TKVIDVIASLQADLKYGNGGGEVDFGIKQSLQQKWLSAIRWRVGFSF-DRVMPYVAGGVS 175
Query: 142 VAQ-----------------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178
++Q K + +G T G G++ ++++ +
Sbjct: 176 LSQFRSTYSKFLVASNNNSSIRSLSEKPLPVSSTSNVNTMVGYTIGGGLDF-AITDNFIL 234
Query: 179 RLEYRASKYSKVEGFYNTIS---------LGVGMKF 205
R EY S + + E + I G+ KF
Sbjct: 235 RAEYNYSDFGRKELVNSKIKFSYKSNAFYFGLAYKF 270
>gi|15420172|gb|AAK97308.1|AF308166_1 Pap31 [Bartonella henselae phage 60457]
Length = 219
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 83/223 (37%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-------------------HNAGGSI 80
+A + G Y G G+F + G I
Sbjct: 1 EVAPTVISAPAFSWTGFYIGGQV---GNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGI 57
Query: 81 FAGYNVEDSC-IMYGVEGDVRYTVP----------------------------------- 104
+AG N++ ++ GVE D +
Sbjct: 58 YAGSNMDLGNNMILGVETDAVWADREDAKTSSAKVIREDELVNFKDSLKNANAVFAKDKT 117
Query: 105 --------VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGK 150
D++ G+ R+R G+ +D ++ Y G V+ T
Sbjct: 118 MDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTKA 177
Query: 151 AG----------EITPIAIGGTAGVGVEVGGLSESLVARLEYR 183
A + T +G T G GV+ ++++++ R EYR
Sbjct: 178 ADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMTDNVLLRAEYR 219
>gi|209966188|ref|YP_002299103.1| outer membrane protein [Rhodospirillum centenum SW]
gi|209959654|gb|ACJ00291.1| outer membrane protein [Rhodospirillum centenum SW]
Length = 231
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 41/205 (20%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------------SFGEEAHHNAGGSIFAGYNV 86
++ + F+G Y G + Y + + G++F GY
Sbjct: 28 ALSSAPALAQSPFDGGYVGAALGYAWMKPNGTTTFSNATTQKVDRTNDGVTGAVFLGYGK 87
Query: 87 EDSCIMYGVEGDVRYTVPVLADNIHSL-----HGIGGSLRIRGGYEVSDSLLLYATVGPD 141
+ G+EG++ + + G + +R G + L+Y +G
Sbjct: 88 TIDTLYLGIEGEIGISDQEKNSTLAGNTYNFDAGTSLGIALRAGLLATPDTLVYGRIGWQ 147
Query: 142 VAQKYETGKAG--------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY------ 187
+G+ G + G G GVE L+E+++ARLEY + Y
Sbjct: 148 RTDLDVSGRLGSVAGTPTMDENEHLNGWRIGGGVE-HALTENVLARLEYNYTDYESYKVS 206
Query: 188 -------SKVEGFYNTISLGVGMKF 205
+ E + + G+ +F
Sbjct: 207 YGQGGARTNAEPHESAVRAGIAYRF 231
>gi|118593370|ref|ZP_01550754.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
gi|118434048|gb|EAV40705.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
Length = 208
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 17/144 (11%)
Query: 77 GGSIFAGYNVEDSCIMYGVEGDVRYTV--PVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134
G + GYN + G+EG+ + N+ + R+R GY D L
Sbjct: 67 VGGVHVGYNHMLGQFVLGIEGEANLANFSDTTSANLDVDINWMIAARLRAGYAF-DRFLA 125
Query: 135 YATVGPDVAQ-KYETGKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK--- 189
+AT G ++ +E G + G G GVE G ++E + R EY+ +
Sbjct: 126 FATTGVSFSEVTFEIPGTGISDSNTHTGFLFGGGVE-GYVTEHISVRAEYQHHWFGNESY 184
Query: 190 --------VEGFYNTISLGVGMKF 205
+EG + + GV F
Sbjct: 185 NVGAGAFDIEGDLDLLRAGVSYHF 208
>gi|12620644|gb|AAG60920.1|AF322013_39 ID525 [Bradyrhizobium japonicum]
Length = 781
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 68/231 (29%), Gaps = 61/231 (26%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------H 74
D + +G P + ++ G Y G + A
Sbjct: 554 DTAQAKANGIDKEPPPVMPT-------NWAGVYLGGTIGAGKGRSHYADPFPTPVSGDYA 606
Query: 75 NAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPVLADNIHSLH-------GIG------- 117
+ GG++F G N + + G+E Y V N G
Sbjct: 607 DLGGAMFGGQIGINYQTGSWVLGLEAS-GYWANVQGTNTCFGAFPSPQIAGFNCGSQIDA 665
Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-------GGTAGVGVEV 169
G+L R GY D LLY G ++ G I+ + G T G G+E
Sbjct: 666 LGALTGRVGYAF-DRTLLYVKGGSAWDRQTNQFNTGGISGTILTNGNTNWGWTVGGGLEY 724
Query: 170 GGLSESLVARLEYRASKYSKV----------------EGFYNTISLGVGMK 204
L + LEY+ + K T+SLGV K
Sbjct: 725 -ALLPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYK 774
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 60/221 (27%), Gaps = 53/221 (23%)
Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSAL---------- 63
+ A AAD V T P ++ G Y G
Sbjct: 27 AGLYGPAHAADLP----------VKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQT 76
Query: 64 ---------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE-----GDVRY--TVPVLA 107
G G G G N + + G+E DV A
Sbjct: 77 ATGLQADFSNRGFPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANRA 136
Query: 108 DNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------E 153
DN + + G++ R G + LL+Y G A +
Sbjct: 137 DNRYGVISFTCDNRVTSLGTIAGRLGQTWGN-LLIYGKAGAAWATDESDARTSHYINKFN 195
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G G+G+E S +L A +EY + + Y
Sbjct: 196 QSGTRWGWMGGLGLEY-AFSPNLSAFVEYDHFDFGSKDSNY 235
>gi|296444784|ref|ZP_06886747.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium
OB3b]
gi|296257732|gb|EFH04796.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium
OB3b]
Length = 1115
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 63/246 (25%), Gaps = 70/246 (28%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ S A + FC A + + + G +AGL+ Y S
Sbjct: 24 IVASVAAYSLFCPLGAGSAIAAEPSAAKSAGAASPPM--------WTGFHAGLNGGYGWS 75
Query: 68 F-------------------------------------GEEAHHNAGGSIFAGYNVEDSC 90
A G + GY+
Sbjct: 76 SDTKAQLTVTPLEPPLLYVPPDRVPPSDNFARDATRSIARSASGAFIGGLQLGYDWAFGE 135
Query: 91 -IMYGVEGDVRYTVPVLADNIH----------SLHGIGGSLRIRGGYEVSDSLLLYATVG 139
+ GVE D + +V + + G+LR R G + SLL+Y T G
Sbjct: 136 RYVVGVEADFQGSVGGHGEATTYSPSTVFVTANQLDYLGTLRGRLGVLATPSLLVYGTAG 195
Query: 140 PD-------------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
A + + +G AG GVE + EY
Sbjct: 196 AAYGGPATRTQITQPGAGVFGGYGESQTDRTRLGWAAGAGVE-WMFDPKWSLKAEYLHYD 254
Query: 187 YSKVEG 192
+ G
Sbjct: 255 LGSIGG 260
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 48/150 (32%), Gaps = 33/150 (22%)
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA------------------DNIHSLHG 115
GG G ++ + G+E D+R +
Sbjct: 926 GFVGGFQIGGNQKLNARFVAGLEADLRGSFGNSGSRSQFGTSTSIGNTFLSFGQTTVRLN 985
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT--------------PIAIGG 161
G++R R GY V+ + LYAT G A + + +G
Sbjct: 986 YLGTIRPRLGYLVTPDVQLYATGGLAFAGLTSSAEMVTDRVGGITTTVGDPLYQDTRLGW 1045
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVE 191
TAG GVE L+ + A+ EY ++
Sbjct: 1046 TAGGGVE-WALAPNWTAKAEYLHYDLGQIR 1074
>gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 205
Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 71/219 (32%), Gaps = 33/219 (15%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
++ + V + LA A AAD + P ++G Y G+
Sbjct: 4 RVKIVVTAAGLAFCLLGPAMAADL---------------SPTYNDPPAFQWSGAYVGVHG 48
Query: 63 LYNGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--NIHSLHGIG 117
+ + G + AGYN + + G E + Y D
Sbjct: 49 GTAFTGMPNPFAGRNGFSGGVQAGYNQQMGPTVLGAEIEGSYLGGAEHDVQGGKIKEKWR 108
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
G+ + + G D LL+ T G + + + +G G G+E G + L
Sbjct: 109 GAAKAKAGLSF-DQTLLFGTGGVALTKFDKGDNVSSADGWKVGYLLGAGIE-QGFAGGLS 166
Query: 178 ARLEYRASK-----------YSKVEGFYNTISLGVGMKF 205
A++EY + SK + + G+ +F
Sbjct: 167 AKVEYDYVRTLGVETTSALGTSKTTIGSHELKAGINYRF 205
>gi|323138252|ref|ZP_08073324.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322396504|gb|EFX99033.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 255
Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 71/215 (33%), Gaps = 40/215 (18%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ SLA+ + SA AAD R P + G YAG++
Sbjct: 3 KTLLTAVSLAVLAAGSAFAADLPSRKE--------APVYVPPPPPPPMWTGFYAGVNIGG 54
Query: 65 NGSFGEEAHH-----NAGGSI------------FAGYNVE-DSCIMYGVEGDVRYTVPVL 106
G + A G + GYN + + GVE D + T
Sbjct: 55 GWDAGNGNGNAWNLFGANGGVTNNMSGGVVGGGQVGYNYQITPMFLVGVETDFQGTSMGS 114
Query: 107 ADNIH------------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154
N + + G++R R G ++ +LL+Y T G A G
Sbjct: 115 GMNNNNWLWGWNGRAQGTSLDWFGTVRGRAGVTITPTLLVYGTGGFAYAGVQRNGGFQT- 173
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ G TAG GVE + A+ EY + S
Sbjct: 174 SATQTGWTAGGGVE-WMFMPNWSAKAEYLYTDVSG 207
>gi|192289353|ref|YP_001989958.1| porin [Rhodopseudomonas palustris TIE-1]
gi|192283102|gb|ACE99482.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 69/210 (32%), Gaps = 47/210 (22%)
Query: 39 PTIATNRYVP-IRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE 87
P Y P +++ G Y G G+F + G G + AGY+ +
Sbjct: 28 PYTKAPAYAPAPVYNWTGFYIGGHIG--GAFSGDNSIGTGVTASDNGKFLGGVQAGYDWQ 85
Query: 88 D-SCIMYGVEGDVRY-----TVPVLADNIHSLHGIG---------GSLRIRGGYEVSDSL 132
+ GVEG + ++ G+ S+ R GY
Sbjct: 86 FAPNWVLGVEGQYSWLSGTNQSVAFGGTLNGAPGVFTYADNQRGLASVTGRLGYTW-GPA 144
Query: 133 LLYATVGPDVAQKYET----GKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYR 183
LLY G A + AG +AI G T G G+E + + ++EY+
Sbjct: 145 LLYVKGGWAYADYSSSLTFVPNAGGFAAVAIDSKKDGYTVGGGLEYL-FAPNWSGKIEYQ 203
Query: 184 ASKYSKVE--------GFYNTISLGVGMKF 205
+ V+ + + G+ +F
Sbjct: 204 YYDFGNVDLGNGFSAKNDEHVVKAGLNYRF 233
>gi|146337818|ref|YP_001202866.1| putative outer membrane protein A-like (OmpA-like) [Bradyrhizobium
sp. ORS278]
gi|146190624|emb|CAL74626.1| Conserved hypothetical protein; putative outer membrane Protein
A-like (OmpA-like) [Bradyrhizobium sp. ORS278]
Length = 673
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 66/202 (32%), Gaps = 39/202 (19%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIR-------HDFNGPYAGLSALYNGSFGEEA----- 72
V G G + T +P++ D+ G Y G A Y
Sbjct: 19 MLVAGTMLAGLGPLATSVAAADLPVKARMAQTVFDWTGLYVGAHAGYTRDHASATLSDPT 78
Query: 73 --------HHNAGGSIFAGYNV-EDSCIMYGVEGDVRYTVPVLAD-----------NIHS 112
+ G + AGYN S ++ G+EGD + + ++ ++
Sbjct: 79 GVASAGSRFNGLTGGVQAGYNWVTRSGLLLGLEGDFSFPNYLTSNHTVAMLGTPGASVSE 138
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGTAGVGV 167
L + R R GY + L YAT G + T AG +G AG G+
Sbjct: 139 LWDYVATARGRVGYA-NGDWLAYATGGVAWTGGRFINTDPAGNTEKRLTTRLGWVAGAGI 197
Query: 168 EVGGLSESLVARLEYRASKYSK 189
E + RLEY +
Sbjct: 198 E-RAFAPDWSWRLEYLYYGFEN 218
>gi|75677026|ref|YP_319447.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi
Nb-255]
gi|74421896|gb|ABA06095.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi
Nb-255]
Length = 652
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 47/204 (23%), Gaps = 43/204 (21%)
Query: 31 HHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-----------GSFGEEAHHNAGGS 79
G +++ G Y G S G+ G
Sbjct: 410 PDQVAGAPLFAKAPAMGVAPYNWTGFYIGASTGVLNGRTDWSFPGFGTGANPRFAGFAGG 469
Query: 80 IFAGYNVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDS 131
GY+ + + G+EG + A + + G+ + GY +
Sbjct: 470 GQIGYDWQTGPWVVGIEGAFNASNANGARSCPNALFYTCRNEIDWLGTATAKLGYALWSR 529
Query: 132 LLLYATVGPDVAQKYETGK-----------------------AGEITPIAIGGTAGVGVE 168
L+Y G + A+G T G G E
Sbjct: 530 SLVYLRGGAAFGNTRIVSTCNTGPNGQYIDYSIPALITQPGCGASSSRTAVGWTIGYGAE 589
Query: 169 VGGLSESLVARLEYRASKYSKVEG 192
LS + R E
Sbjct: 590 F-ALSRNWTVRAESNYFDLGTERH 612
>gi|323136029|ref|ZP_08071112.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC
49242]
gi|322399120|gb|EFY01639.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC
49242]
Length = 582
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 71/253 (28%), Gaps = 74/253 (29%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+ + +L A FC+ P A P P + G Y G +
Sbjct: 5 KSVTRRFAACALTFAGFCA-----PASGADLPSFKGAPVAP-----PPVFTWTGLYVGFN 54
Query: 62 ALYNGSFGEEAHHNA---------------------------GGSIF---AGYNVE-DSC 90
+ + + + GG F AGYN +
Sbjct: 55 FGHTWTASDPVSIGSVNPFDLSGAGFGPASALGATGAVDARLGGYFFGGQAGYNWQFSEK 114
Query: 91 IMYGVEGDVRYTVPVLADNIHS-----------------LHGIGGSLRIRGGYEVSDSLL 133
++ G E D++ ++ S G++R R GY V+ + +
Sbjct: 115 LIAGFEADIQGAGVRGGGHLASILPAPAGFAVSGVKLSRGLEYFGTVRGRFGYAVTPTFM 174
Query: 134 LYATVGPDVAQ---------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178
Y T G + +G T G G EV LS ++ A
Sbjct: 175 AYVTGGLAYGGVTADSAIRQSLTPSLLLAEPGKLDYFDNRVGWTVGAGGEV-ALSRNISA 233
Query: 179 RLEYRASKYSKVE 191
+LEY V
Sbjct: 234 KLEYLYYDLGGVT 246
>gi|319898376|ref|YP_004158469.1| Hemin binding protein E [Bartonella clarridgeiae 73]
gi|319402340|emb|CBI75879.1| Hemin binding protein E [Bartonella clarridgeiae 73]
Length = 299
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 19/110 (17%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE--------TGKAGEITPIAIGGTAG 164
G+ R+R G+ +D ++ Y G + + + + IG T G
Sbjct: 192 KEKWTGATRVRIGFA-ADRIMPYVAGGISYVELQDTLSVVIGTEENKADESKTMIGYTFG 250
Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
GV+ L+ S++ R EYR S + K N +GV KF
Sbjct: 251 GGVDF-ALTNSIIVRTEYRYSDFGKKKFAKEEVDLSYKTNNFRVGVAYKF 299
>gi|90424253|ref|YP_532623.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
gi|90106267|gb|ABD88304.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
Length = 247
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 67/212 (31%), Gaps = 40/212 (18%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K L V +AL A AAD R + YV +D++G Y G
Sbjct: 1 MKKFLLGT-VGVVALGLAAPAVAADLPARTYTK---------APAYVAAVYDWSGFYIGA 50
Query: 61 SALYNGSF------------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY------- 101
+A + S G A GY + ++G+E +
Sbjct: 51 NAGWGNSRDSRFDETFGLDLGAHDADGAVAGGQIGYRWQTGTWVFGLEAQGDWADLSGNH 110
Query: 102 -TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT----- 155
V + + S G + GY ++ LLY G V +
Sbjct: 111 LNPLVFDNRLSSKTDAFGLFTGQIGYAW-NNALLYVKGGAAVTDRKYDFTVDSTGAPISS 169
Query: 156 ---PIAIGGTAGVGVEVGGLSESLVARLEYRA 184
GT GVG+E G + + +EY
Sbjct: 170 TGYKTRWSGTVGVGLEY-GFAPNWSFGVEYDH 200
>gi|27376315|ref|NP_767844.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27349455|dbj|BAC46469.1| outer-membrane immunogenic protein precursor [Bradyrhizobium
japonicum USDA 110]
Length = 241
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 61/208 (29%), Gaps = 38/208 (18%)
Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSAL--------YNG-SFGEEAHHNAGGSIFAGY 84
G YV +++ G Y G +NG S G + G + G
Sbjct: 26 GNRNYYKAPAPAYVAPIYNWTGFYLGAHVGGAFSSDNNFNGLSTGNNGNGRFLGGVQVGA 85
Query: 85 NVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYAT 137
+ + + + GVEG + + GS+ R GY LLY
Sbjct: 86 DWQFNPNFVVGVEGQYSWLSGSVGAVFPGGVAYTNDQRGLGSITGRVGYTW-GPGLLYVK 144
Query: 138 VGPDVAQKYETGKAGE-------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
G + E G G T G G+E + + A+ EY+ +
Sbjct: 145 GGYAYSDNNEKVTVGGVPTGFIIDGDHRNGYTVGAGLEY-MFAPNWSAKAEYQYYNFGDA 203
Query: 191 -------------EGFYNTISLGVGMKF 205
+T GV +F
Sbjct: 204 HFTAGPLAGTGNFTTDDHTFKAGVNYRF 231
>gi|254503257|ref|ZP_05115408.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
gi|222439328|gb|EEE46007.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
Length = 184
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 17/162 (10%)
Query: 47 VPIRHDFNGPYAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97
P + GPY G A + G + + +A +F GYN E S ++ GVEG
Sbjct: 2 APAGSIWAGPYLGFEAGGSQTVTEVKAGGQKKDYSRFDAAFGVFGGYNWEVSRVILGVEG 61
Query: 98 DVRYTVPVLADN------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151
Y I + + + R G + ++ + Y ++G
Sbjct: 62 AATYIGDTKKGQHPVLGTIETGSKWSVTAKTRVGLPI-NNFMPYVSLGVAATDHSLKANG 120
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ + +G G GVEV + ++ R +Y + + +
Sbjct: 121 RTESSVGLGAVLGAGVEV-AMHDNWRLRADYTLTGIADTKDT 161
>gi|319898546|ref|YP_004158639.1| Hemin binding protein B [Bartonella clarridgeiae 73]
gi|319402510|emb|CBI76053.1| putative Hemin binding protein B [Bartonella clarridgeiae 73]
Length = 609
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 24/115 (20%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPD-----VAQKYETGKAGEIT---------PIA 158
G+ RIR G + + Y G + G+
Sbjct: 497 KQKWSGATRIRLGLA-AGRFMPYIAGGVAYTKIQGTFSKLIKEIGKENTSSNLFDSVETM 555
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGMKF 205
IG T G + +++ ++ R EYR S + + + N + +G+ KF
Sbjct: 556 IGYTLSGGFDF-AMTDRVLIRSEYRYSDFGEKKFKKINSKYYKINDVRIGLAYKF 609
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 34/131 (25%), Gaps = 33/131 (25%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYN 65
V +S + Q AD + V + + G Y G ++
Sbjct: 6 LVTISVFSFILASRVQGADIINHQDSRSI-----------VAPVYSWKGFYLGGQIGGFS 54
Query: 66 GSFGEEAHH-------------------NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV 105
G H G +AG N + + GV+ D+ ++
Sbjct: 55 GLTTFNYHKYDNIEKWNSIDEDLSSEIFGFTGGFYAGSNFDFGNGFILGVDTDIVFS-NK 113
Query: 106 LADNIHSLHGI 116
+ +
Sbjct: 114 KDTKVFVKNKF 124
>gi|91977226|ref|YP_569885.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91683682|gb|ABE39984.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 241
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 56/184 (30%), Gaps = 31/184 (16%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG--------------SIFAGY 84
P + +D++G Y G + + S + GG GY
Sbjct: 28 PYAKAPPIIAAVYDWSGFYIGANGGWGTSRKSWDFYTVGGLAAEGSHDASGATAGGQIGY 87
Query: 85 NVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYA 136
N + ++G+E + ++ + S G R GY ++ LLYA
Sbjct: 88 NWQAGSWVFGLEAQGNWADFKGSNVTLLGGLFDNQSRIDAFGLFTGRVGYAW-NNALLYA 146
Query: 137 TVGPDVAQKY-------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G V + G + G G G E G + + +EY K
Sbjct: 147 KGGAAVVNDKYDFIRRADGFVTGTASETRWGAAVGAGFEY-GFTPNWSFAVEYDHLFLDK 205
Query: 190 VEGF 193
+
Sbjct: 206 KDVT 209
>gi|260426559|ref|ZP_05780538.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260421051|gb|EEX14302.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 199
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 18/204 (8%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY----NG 66
S + L + A + V P P+ D+ GP G Y
Sbjct: 5 SLILLPFLATPALAGSLEPTPVEPAPVAPLAPVAS--PVTGDWTGPSVGAQLGYGSVDTD 62
Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126
G+++ + A Y+ + + G V+Y + + R GY
Sbjct: 63 GAGDDSEDGMVYGLRAFYDHDFGNWVAG--AGVQYDATDIDLGDAGDLDGIARVGGRVGY 120
Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
++ ++Y T G A T + G G GVE +S+++ E ++
Sbjct: 121 DL-GRTMVYGTGGYAHA---TTDGGSLDAGSSGGYYVGAGVET-FVSDNVTLNGEVNYNE 175
Query: 187 YSKVEGFYNTI-----SLGVGMKF 205
+S + + ++G+ +F
Sbjct: 176 FSDFDDDDLEVGATTATVGINYRF 199
>gi|296444331|ref|ZP_06886296.1| porin [Methylosinus trichosporium OB3b]
gi|296257978|gb|EFH05040.1| porin [Methylosinus trichosporium OB3b]
Length = 277
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 44/181 (24%)
Query: 48 PIRHDFNGPYAGLSALYNG----------------SFGEEAHHNAGGSIFAGYNVE-DSC 90
P + GPY GL+ + + ++ G + GYN +
Sbjct: 36 PPVFSWTGPYVGLNLGGSWITRNNDWNNWGGWGWNNNNSGSNGGVSGGLQIGYNYQLSPM 95
Query: 91 IMYGVEGD--------------------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130
+ G+E D V ++ +N G++R R G + D
Sbjct: 96 FVVGLETDFQGTSIGGGNNNNNWWGYGGVGWSNWWNNNNNE-RVPWFGTVRGRLGVALLD 154
Query: 131 -SLLLYATVGPDVAQKYETGK----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
LL+Y T G + G + G TAG G+E L + A++EY +
Sbjct: 155 SRLLIYGTGGFGYGEVNRNDLFSWWGGNNGQLRTGWTAGGGIEWAFL-PNWSAKIEYLYT 213
Query: 186 K 186
+
Sbjct: 214 E 214
>gi|146341076|ref|YP_001206124.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193882|emb|CAL77899.1| putative outer-membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 237
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 35/206 (16%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG--LS 61
+ + +++ + AAD R T A + +D++G Y G
Sbjct: 1 MKKLLLMTTALVVLASPTLAADLAAR--------PYTKAPAPMMAAIYDWSGFYIGANGG 52
Query: 62 ALYNGSFGE-------EAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ + + +H ++GG+I GY + +++GVE + +
Sbjct: 53 GGWSHNTWDLVGGGREGSHDSSGGTIGGQFGYRWQMGPVVFGVEAQGNWADFTGDNVSAL 112
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIA 158
A + G + GY +++LLYA G + T
Sbjct: 113 FATRNRTKTDAFGLFTGQVGYAF-NNVLLYAKGGAAVTSNKYTITNAVTGAFLASNTDSR 171
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA 184
GG G G+E G + + +EY
Sbjct: 172 WGGVVGAGLEY-GFAPNWSVGVEYDH 196
>gi|240850342|ref|YP_002971735.1| hemin binding protein E [Bartonella grahamii as4aup]
gi|240267465|gb|ACS51053.1| hemin binding protein E [Bartonella grahamii as4aup]
Length = 330
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 21/112 (18%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-----------GKAGEITPIAIGG 161
G+ R+R G+ + ++ Y G Q + + + T IG
Sbjct: 221 KQKWTGATRVRVGFS-AGRVMPYIAGGVAYGQFQDILSTVITGGEPFNRTSDATKTMIGY 279
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGMKF 205
T G GV+ +++ LV R EYR S + K + N G+ KF
Sbjct: 280 TLGGGVDF-AMTDHLVVRAEYRYSDFGKKKFKDEIEVKYKTNDFRAGIAYKF 330
>gi|323137480|ref|ZP_08072557.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
gi|322397106|gb|EFX99630.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
Length = 722
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 65/216 (30%), Gaps = 67/216 (31%)
Query: 48 PIRHDFNGPYAGLSALYNG-------------------SFGEEAHHNAGG-------SIF 81
P + G YAG + + FG + +A G +F
Sbjct: 41 PSVFTWTGLYAGANFGHAWASKNAIGLRSTNLVDLTTIGFGPASALSASGVADARLNGLF 100
Query: 82 AG----YNVEDS-CIMYGVEGDVRYT--------------------VPVLADNIHSLHGI 116
AG YN + + + GVE D++ V + ++
Sbjct: 101 AGGQVGYNWQFAKQFVVGVEADIQGASVDGGGGLANVAAARLAPPAWAVTSASLRRNLEY 160
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKY---------------ETGKAGEITPIAIGG 161
+LR R GY + +LLLYAT G + + GE +G
Sbjct: 161 IATLRGRFGYAATPTLLLYATGGIAHGRARAGIELEQSLTSSDFDDAEVEGEHYGNLMGF 220
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197
G G+E + +LEY + I
Sbjct: 221 VIGGGLEA-AFGRHVSGKLEYLYYDLGTLRLGTPRI 255
>gi|115524895|ref|YP_781806.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53]
gi|115518842|gb|ABJ06826.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53]
Length = 247
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 69/214 (32%), Gaps = 42/214 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ L V +AL A AAD P + + +D++G Y G
Sbjct: 1 MKRILLG-SVGLIALGMAAPAFAADL----PARTYTKAPPM-----IAAIYDWSGFYIGA 50
Query: 61 SALYN---------------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105
+ + GS G A GY + ++G+E +
Sbjct: 51 NGGWGSSRSSWDYLGPGLAVGSEGSHDADGAVAGGQIGYRWQAGTWVFGLEAQGNWADLS 110
Query: 106 LA--------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA------ 151
+ D I + G + GY ++ LLY G V
Sbjct: 111 GSNISSLFITDTIRTKVDAFGLFTGQFGYAW-NNALLYVKGGAGVVSSKYDAFTTATGAA 169
Query: 152 -GEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
G GGTAGVG+E G + + +EY
Sbjct: 170 LGSANSTRWGGTAGVGLEY-GFAPNWSVAVEYDH 202
>gi|209886119|ref|YP_002289976.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874315|gb|ACI94111.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 237
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 84 YNVED--SCIMYGVEG-------DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134
YN + S ++G+E D+ + P + GS+ R GY V+D LL+
Sbjct: 90 YNWQGFGSPFVFGLEAEIAGSGIDLSFVDPADGSGASYKLNMFGSVTGRVGYAVNDMLLI 149
Query: 135 YATVGPDVAQKYETGKAGEI----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
YA G A+ + G + G T G G+E ++ + + EY + Y K
Sbjct: 150 YAKGGYAWARTKLSVVDGADSFSSSATHSGYTIGAGLEY-MMARNWSTKAEYLYADYGKA 208
Query: 191 E-------------GFYNTISLGVGMKF 205
+T+ G+ F
Sbjct: 209 TYGPAPDGDTGRIGLSNHTVKFGINYHF 236
>gi|86749319|ref|YP_485815.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572347|gb|ABD06904.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 42/231 (18%)
Query: 9 GVSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+S++AL + A AAD P + +++ G Y G + +
Sbjct: 5 LLSAVALGALGAPAFAADL---GPRPAYTKAPPATAPT---VVYNWTGFYIGGNVGGAFA 58
Query: 68 FGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------ 117
++G G + G++ + + G+E + I
Sbjct: 59 GSNNLQSDSGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVIFPAGSTATENTRG 118
Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYE-------TGKAGEITPIAI-GGTAGVGVE 168
GS+ R GY LLYA G A + G T G G+E
Sbjct: 119 LGSVTGRIGYTW-GPALLYAKGGYAFRDSSLGVATAGGIPAAYSTSGSRNDGYTVGAGLE 177
Query: 169 VGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205
+ S A++EY+ K+ +T+ G+ +F
Sbjct: 178 Y-MFAPSWSAKVEYQYYKFDNTAFTSGPADMVGTTFRNDDHTVKAGINYRF 227
>gi|75674527|ref|YP_316948.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255]
gi|74419397|gb|ABA03596.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255]
Length = 674
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 71/206 (34%), Gaps = 43/206 (20%)
Query: 29 RAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF------------GEEAHHNA 76
+ P + R + D++G Y G A + G G
Sbjct: 35 QNGFAQAADFPAVRKARPLTAI-DWSGFYVGGHAGFGGGRSAATLFDPAPAAGRNVFGGL 93
Query: 77 GGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRG 124
G I AGYNV ++ G+E DV + + ++ +I G+ R R
Sbjct: 94 IGGIQAGYNVRLPSGLLLGLEADVSFPSYIESNSFVSGLATARSDITHQWDFIGTARARF 153
Query: 125 GYEVSDSLLLYATVGPD-VAQKYETG-KAGEITP---IAIGGTAGVGVEVGGLSESLVAR 179
GY + L YAT G +Y +G+ G AG G+E + AR
Sbjct: 154 GYA-AGPWLAYATGGLAFAGDRYLNDLPSGDQEKMLDARFGWVAGAGLEY-AFAPYWSAR 211
Query: 180 LEYRASKYSKVEGFYNTISLGVGMKF 205
LEY ++ G G++F
Sbjct: 212 LEYLHYQFE-----------GTGVQF 226
>gi|86749064|ref|YP_485560.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572092|gb|ABD06649.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 254
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 58/216 (26%), Gaps = 54/216 (25%)
Query: 16 ASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL--SALY--------- 64
A AAD +A P+ + G Y G +
Sbjct: 17 LGSSMALAADMAMKAPVKAVPYAPSP----------SWTGLYVGGHLGGGWVDETATFVS 66
Query: 65 ---------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD------- 108
G+ H G + AGYN + + G+ GD +T +
Sbjct: 67 STSINLIDPLGTSYPIDHSGFLGGVQAGYNYQIQNWVIGIAGDFSWTSAKVDTVTASLLV 126
Query: 109 -----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG----------E 153
+ + + R GY + LL Y G G A +
Sbjct: 127 PGAQVHTQAKTDWYATATGRVGYAFGN-LLAYGKGGAAWIHSVHGGFADFGAAGIVPFSD 185
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+T G T GVG+E + EY +
Sbjct: 186 VTTTRAGWTVGVGLE-WAFAPHWSVFGEYNYMDFGT 220
>gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 205
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 72/217 (33%), Gaps = 33/217 (15%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ + S+LA+ A AAD + P ++G Y G+
Sbjct: 6 KIILTASALAMCLLGPAMAADL---------------SPAYNDPPAFQWSGAYVGVHGGT 50
Query: 65 NGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--NIHSLHGIGGS 119
+ + G AGYN + + G E + Y D G+
Sbjct: 51 AFTGMPNPFAGRNGLSGGFQAGYNQQMGPAVLGAEIEGSYLGGAEHDVRGGKIKEKWRGA 110
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
+ + G D LL+ T G + + + K I +G G G+E G + L A+
Sbjct: 111 AKAKAGLSF-DQTLLFGTGGVAMTKFDKGDKVNGIDGWKLGYLVGGGIE-QGFAGGLSAK 168
Query: 180 LEYRASKYSKVEGF-----------YNTISLGVGMKF 205
+EY + VE + + G+ +F
Sbjct: 169 VEYDYVRTPGVETTSALGKSKATIGSHELKAGINYRF 205
>gi|86749266|ref|YP_485762.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572294|gb|ABD06851.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 274
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 77/242 (31%), Gaps = 50/242 (20%)
Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG------------ 59
+L F +A A + A P V +NG Y G
Sbjct: 25 ALKTFLFGTAAALVMMSSASAADLAARPYTKAAPIVAPVLTWNGFYIGGQGGYGWGSSDE 84
Query: 60 ---LSALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV----------- 103
+A FG + + +GG GYN + +++G+EGD +
Sbjct: 85 TVFAAANTPAFFGSQKYDTSGGFAGGVVGYNWQSGAVVFGLEGDYHWADINGTSSVINVG 144
Query: 104 -PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-----ITPI 157
P L D + G ++ R GY + L + + G V G
Sbjct: 145 PPNLGDTYSTKLRGFGDIKGRLGYA-AGPALWFVSGGAAVGDLQHRYDGGAANTFVQNKT 203
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGM 203
G T G GVE + S A+LEY + + ++T+ +G+
Sbjct: 204 KWGYTVGAGVEY-MFAPSWSAKLEYNYIDLGRSTIQYTAAPTNRSEWKDTFHTVKVGINY 262
Query: 204 KF 205
F
Sbjct: 263 HF 264
>gi|312115943|ref|YP_004013539.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221072|gb|ADP72440.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 291
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 53/280 (18%), Positives = 76/280 (27%), Gaps = 87/280 (31%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V S+LA F +A GG G P + G Y G +
Sbjct: 6 VRASALAAGVFAIIGSASAADIYGGGGYGGYKDAPIIVAAPA---WTGFYVGGHLGAAWT 62
Query: 68 FGEEAHH------------------------------NAGGSIFAGYNVEDS-CIMYGVE 96
E + A G GYN + + G+E
Sbjct: 63 NLETRRNTYWDRDPLPTGVAAAPYDYSTFGGNGLGTTGAFGGGQFGYNWQTGGNFVLGIE 122
Query: 97 GDVR--------------YTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135
DV Y P L N+ S GI G + R GY ++ LLY
Sbjct: 123 VDVGGLQGDNERTFAAATYDGPALDAIDHIAVVNVKSQGGIYGDVTGRLGYAWGNT-LLY 181
Query: 136 ATVGPD--VAQKYETGKAGEITP-----------IAIGGTAGVGVEVGGLSESLVARLEY 182
G +I G TAG G+E + + ++EY
Sbjct: 182 LKGGFAWLATDLKVRAAITDIDGETDYYNRSFDNTLTGWTAGGGLEYQ-FNPNWTMKVEY 240
Query: 183 RASKYS-----------------KVEGFYNTISLGVGMKF 205
+S K + +T+ LG +F
Sbjct: 241 LHFDFSLDDNNWRWDEGNNWKIFKNDVTADTVKLGFNYRF 280
>gi|296445833|ref|ZP_06887785.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256661|gb|EFH03736.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 277
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 76/238 (31%), Gaps = 56/238 (23%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A + +LA SA AAD R A P + G Y GL
Sbjct: 1 MKKYVVAASMLALAF-GMGSASAADLPSRKD--------APAFLPPPPPPPMWTGFYVGL 51
Query: 61 SALYNGSFGEE----------------------------AHHNAGGSIFAGYNVED-SCI 91
+A Y + ++ G GYN + +
Sbjct: 52 NAGYGWTNNNTVTQSYADTGSAGFGAQALGGNFPWNASVSNDGFIGGGQIGYNAQVYNSF 111
Query: 92 MYGVEGD----------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
+ G+E D Y P + +I G++R R GY V+ +LL YAT G
Sbjct: 112 VVGLEADMQGVASDRQAASYYGPTASASISRSLDYLGTVRGRVGYLVTPTLLAYATGGLA 171
Query: 142 VAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
Q +G + + +G + G G E + A+ EY
Sbjct: 172 YGQANLSGAYYGTATGSDSFSDTRVGYSVGGGFEWLFM-PHWSAKAEYLYYDLGNATT 228
>gi|316932990|ref|YP_004107972.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1]
gi|315600704|gb|ADU43239.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1]
Length = 696
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 75/239 (31%), Gaps = 68/239 (28%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG 78
A AAD VR A R D++G Y G + AGG
Sbjct: 44 APAAAADLVRTAPLAPR-------------AVFDWSGFYIGAHFSAVAGHSNWSSAPAGG 90
Query: 79 ---------------------SIFAGYNVEDSC-IMYGVEGDVR-------YTVPVLADN 109
+ AGYN + GVE D+ T L
Sbjct: 91 SGSIDLFDAFQLFKGTGSYVVGLQAGYNWMLPSRWLIGVEADLNSPNTLGGNTGNTLPSG 150
Query: 110 IHSLHG----IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIA---- 158
H +GG++R R GY + L Y T G + A A
Sbjct: 151 TVGGHDHQALLGGTVRGRLGYALGG-WLPYVTAGFAWSYDRLRWPPDPALAQQETALLWR 209
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK-------------VEGFYNTISLGVGMK 204
+G +AG G+++ LS + AR EY A+ + + + + LG+ +
Sbjct: 210 LGWSAGAGIDLP-LSPAWSARAEYLATGFGNGTVSFPIAGERVTSDVLTHAVRLGLNYR 267
>gi|134095715|ref|YP_001100790.1| hypothetical protein HEAR2547 [Herminiimonas arsenicoxydans]
gi|133739618|emb|CAL62669.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 278
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 70/190 (36%), Gaps = 49/190 (25%)
Query: 55 GPYAGLSALYNGS-------FGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPV 105
G +AG+ +G+ G A + GG GYN I G+E D+++T
Sbjct: 60 GYFAGVGGDASGAIAQASSLTGRYASSHKGGAVGAHLGYNWPSGKIFLGLESDIQFTDLK 119
Query: 106 LADNIHSLHGIGG--------------------SLRIRGGYEVSDSLLLYATVGPDVAQ- 144
+++++ + G +LR R GY V+D LLY T G V +
Sbjct: 120 DNAALNTINPVTGYPGNPMSANVRQVNTVDYLVTLRGRIGY-VNDQWLLYGTGGVAVGRV 178
Query: 145 ----------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
++ AG + +G G G E ++++ R+EY
Sbjct: 179 NTNINYKGSYLSAPTIVFDDLNAGSRS-TRLGFVLGAGAEY-AIAKNWAVRVEYLYYDLG 236
Query: 189 KVEGFYNTIS 198
K YN S
Sbjct: 237 KSSQSYNVTS 246
>gi|85715276|ref|ZP_01046259.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A]
gi|85697922|gb|EAQ35796.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A]
Length = 283
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 87/289 (30%), Gaps = 97/289 (33%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L LA + A A AAD ++T R V + G Y G
Sbjct: 8 MRRLLLAAVICGAA----QGAYAADMPDDLPFLRGSQPAGLSTVRTV-----WQGFYIGG 58
Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88
A Y + G ++ ++G F GYNV+
Sbjct: 59 QASYGSADMDFKNSGKDLLERLLNNLDVEGQYHLSTWPLGGTSSNRSSGFGGFLGYNVQM 118
Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIG------------------------GSLRIRG 124
++GVE YT G GSLR+RG
Sbjct: 119 EDAVFGVEA--NYTHGKFFGASSGSQGRSFNYPTNYLTSAFVQSNASMQITDFGSLRVRG 176
Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAG---------------------------EITPI 157
GY L YA G + + A
Sbjct: 177 GYSF-GCFLPYAFAGVAMGRADIRRNASYSLYYQYIGTQIPPLPDLSGSSSLSDNANAHF 235
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205
G AG+G+++ +SL R E+ +++ V+ NT+ GVG +F
Sbjct: 236 IYGYAAGLGIDMMIF-DSLFLRAEWEFLRFTAPVDTIVNTVRAGVGYRF 283
>gi|312115598|ref|YP_004013194.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC
17100]
gi|311220727|gb|ADP72095.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC
17100]
Length = 249
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 74/213 (34%), Gaps = 36/213 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K F+A ++ A SA A D ++ + +V T + G Y GL
Sbjct: 1 MKKTFVAAASAAAIFAMSGSALAGDLYAKSGYKDAPIVVAEPT---------WTGFYIGL 51
Query: 61 SAL-------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV------ 95
+ G + G++ GY+ + I+ GV
Sbjct: 52 GVGGQAVNHELSASDFDAGDEEWIGDLNGVSGTGVIGTVEVGYDRQFGNIVAGVFFNYDF 111
Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEI 154
DV ++ + N+++ + R GY V+ L Y G + G
Sbjct: 112 GDDVSSSLRIEDLNVNAKQTDSWTAGGRLGYLVNPGTLAYVLGGYTQSTFELGFPGFGSA 171
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
G T G G+E LS + + EYR +++
Sbjct: 172 DDTFAGWTVGGGLETR-LSGNWYLKGEYRFTEF 203
>gi|296447741|ref|ZP_06889657.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296254773|gb|EFH01884.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 248
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 54/160 (33%), Gaps = 27/160 (16%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHN--------AGGSIFAGYNVE-DSCIMYGVEGDVRY 101
+ G Y G A G + G GYN ++ G+E D Y
Sbjct: 41 FSWRGFYLGGFAGALLGDGTFTYFEQTPMRGAALVGGGTIGYNWMWTPTLLVGIEADFGY 100
Query: 102 TVPVLADNIH------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-- 153
V ++ ++ + G+ G+ R R GY + L YAT G +
Sbjct: 101 RGQVYSERVNRVYPGPTDGGVLGTARARLGYAFAPRWLSYATAGFAYGTDFPPRGFTSTM 160
Query: 154 ---------ITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
T + G TAG GVE S+ + + EY
Sbjct: 161 PLTFGVQNTGTTVRAGWTAGAGVEY-AWSDLISVKAEYLY 199
>gi|217979538|ref|YP_002363685.1| putative outer-membrane immunogenic protein precursor [Methylocella
silvestris BL2]
gi|217504914|gb|ACK52323.1| putative outer-membrane immunogenic protein precursor [Methylocella
silvestris BL2]
Length = 200
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 22/145 (15%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-----------SIFAGYNVE 87
P A P + G YAG++ G E A ++ G GYN +
Sbjct: 35 PKEAPLYTPPPEFSWTGFYAGVNIG-GGLSAENAFNSFSGINASRAGGVVGGGQVGYNYQ 93
Query: 88 -DSCIMYGVEGDVRYTVPVLADNI----HSLHGIGGSLRIRGGYEVSDS-LLLYATVGPD 141
+ G+E + + ++N H G+ R R G+ V D LL+Y T G
Sbjct: 94 LTPLFVVGIENEFLGSSISTSNNDWNRPHVTVPFFGTARGRAGFTVFDPHLLVYGTGGLA 153
Query: 142 VAQKYETGKAGEITPIAIGGTAGVG 166
Q + G I + IG TAG G
Sbjct: 154 FGQVNDAG----INKLRIGWTAGSG 174
>gi|91978029|ref|YP_570688.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
BisB5]
gi|91684485|gb|ABE40787.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
BisB5]
Length = 724
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 78/230 (33%), Gaps = 55/230 (23%)
Query: 27 VRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE---------------E 71
V G G+V P D+NG Y G Y + +
Sbjct: 69 VVTTPAAGGGIVVKAPAAG-GPAVFDWNGFYIGGHFSYVAGRSDWTAQPAGVSGTIDLFD 127
Query: 72 AHHNAGG------SIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-----------DNIHSL 113
A G + AGYNV + G+E D+ +
Sbjct: 128 AFDAFKGTGSYTLGLQAGYNVLLPSRWLLGLEADLTSPNRIGGNASISPPTGTIGGHDHQ 187
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPIA--IGGTAGVGV 167
+ G++R R GY + D L YAT G + + A E T + +G AG GV
Sbjct: 188 TQLAGTVRGRLGYAL-DGWLPYATAGFAWSYDRLRWPSEAAATEETALLWRLGWAAGAGV 246
Query: 168 EVGGLSESLVARLEYRASKYSK-------------VEGFYNTISLGVGMK 204
E+ LS + AR+EY A+ + + + + + LG+ +
Sbjct: 247 ELP-LSPAWTARVEYLATGFGRDTARFPIAGHQIESDALIHAVRLGLNYR 295
>gi|323139011|ref|ZP_08074071.1| porin [Methylocystis sp. ATCC 49242]
gi|322395765|gb|EFX98306.1| porin [Methylocystis sp. ATCC 49242]
Length = 291
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 75/259 (28%), Gaps = 79/259 (30%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ +V V +L S A AAD R P + G Y GL
Sbjct: 1 MRKIAFSVAVLALTAGS---ALAADLPSRK---------EAPVYVPPPPPPMWVGFYVGL 48
Query: 61 SALYNGSFGEEA-------------------------------HHNAGGSIFAGYNVED- 88
+A + + + G GYN +
Sbjct: 49 NAGGTWAASTNSASDAWGLANGGTPIHGWVAAASAASWQNGGNNSGFIGGGQIGYNWQFM 108
Query: 89 SCIMYGVEGDVRY--------------------TVPVLADNIHSLHGIGGSLRIRGGYEV 128
+ + GVE D++ T V N S G++R R G+
Sbjct: 109 NSFIAGVEADIQGVAGNSPNRDIFGSSFDPISGTNIVTFGNRSSRLDYLGTVRGRLGWLF 168
Query: 129 SDSLLLYATVGPDVAQKYETG--------------KAGEITPIAIGGTAGVGVEVGGLSE 174
+ ++L+Y T G + + +G TAG G+E
Sbjct: 169 TPTMLVYGTGGLAYGGVSTSATFVTSEIGFPFNSVASASFADTRVGWTAGGGIE-WMFMP 227
Query: 175 SLVARLEYRASKYSKVEGF 193
+ A++EY V
Sbjct: 228 NWSAKVEYLYYDLGTVSAT 246
>gi|299135509|ref|ZP_07028695.1| OmpA domain protein transmembrane region-containing protein [Afipia
sp. 1NLS2]
gi|298589733|gb|EFI49942.1| OmpA domain protein transmembrane region-containing protein [Afipia
sp. 1NLS2]
Length = 229
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 71/230 (30%), Gaps = 43/230 (18%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63
+ +++A S S AAD R + YV +++ G Y G
Sbjct: 1 LLAATVAALSSTSVFAADLAARHYTK---------APAYVAPIYNWTGFYIGAQVGGAFQ 51
Query: 64 -------YNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRYTV-------PVLAD 108
G G + G G N + + G+EG+ A+
Sbjct: 52 GSSGYNATAGVVGTRDDSSFIGGGVVGANYQFAPNWVVGLEGEFNGLSNNRHTFTDATAN 111
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ--KYETGKAGEITPIAIGGTAGVG 166
+ + S+ R GY ++YA G + + G T G G
Sbjct: 112 TVSIKNDWLASVTGRLGYTW-GPGMIYAKGGVAFRDNGGVTSNVVALVDRNDTGYTVGAG 170
Query: 167 VEVGGLSESLVARLEYRASKY-----------SKVEGFYNTISLGVGMKF 205
+E + + A++EY+ + + +T+ G+ F
Sbjct: 171 LEY-MFAPAWSAKVEYQYYNFDHTNVAFATNTASYRDDLHTVKAGINYHF 219
>gi|85714944|ref|ZP_01045929.1| outer membrane autotransporter barrel protein [Nitrobacter sp.
Nb-311A]
gi|85698141|gb|EAQ36013.1| outer membrane autotransporter barrel protein [Nitrobacter sp.
Nb-311A]
Length = 654
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 50/181 (27%), Gaps = 43/181 (23%)
Query: 51 HDFNGPYAGLSALYN-----------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
+++ G Y G SA G+ + G GY+ + + G+EG +
Sbjct: 432 YNWTGLYIGASAGVLNGRNDWSFPGLGTRTNPRYAGFAGGGQIGYDWQIGTWVVGLEGSL 491
Query: 100 RYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK- 150
+ A + + G+ + GY + + L+Y G
Sbjct: 492 MGSNARGARSCPNALFYTCENEMNWLGTATAKLGYTIWNRSLVYLRGGAAFGNTRIVTNC 551
Query: 151 ----------------------AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
+ A G T G+G E L+ S R E
Sbjct: 552 NTGPDRGYIDYSIPAVIAQPGCGANSSKTAAGWTVGLGTEF-ALTRSWTVRAESNYFDLG 610
Query: 189 K 189
Sbjct: 611 T 611
>gi|86749852|ref|YP_486348.1| hypothetical protein RPB_2735 [Rhodopseudomonas palustris HaA2]
gi|86572880|gb|ABD07437.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 570
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 69/220 (31%), Gaps = 55/220 (25%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69
+S+ L ++QAAD R P + G Y G G
Sbjct: 8 LSAALLTPSGTSQAADLAR----------PAAPLAG---AVWTWTGFYVGAHLG-AGFGT 53
Query: 70 EEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------------VRY 101
+ + G SI+ AGYN + + G+E D + Y
Sbjct: 54 VKVDNPYGPSIYGDTIRVPKALAGLQAGYNWQVPGSPWVLGIELDASALDADGTDTCLAY 113
Query: 102 TVPVLADNIHSLHGIGGSLRIRGG--YEVSDSLLLYATVGPDV----------AQKYETG 149
+ ++ N G++ R G + L Y G V A Y
Sbjct: 114 SGQFVSANCRVREHALGTVTGRIGRVFGPQGRSLAYLKGGAAVLAGDLTMTTNAVDYLNQ 173
Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
A ++ G T G G+E GLS + EY + + +
Sbjct: 174 PAAKLDATRWGWTVGAGLEY-GLSSGWTVKAEYDYAAFGR 212
>gi|254510731|ref|ZP_05122798.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221534442|gb|EEE37430.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 228
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 18/173 (10%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97
A ++ G Y G Y + + G I GY+ + + G
Sbjct: 66 AAGPALAQSSGNWTGFYGGAQIGYADIDTNVSGVDGDGLIGGIILGYDYDLGDWVVGGGF 125
Query: 98 DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
D ++ L+ ++ R GY+V+ LLY T G A +T G
Sbjct: 126 DYDWSDVDLSSAATVESVWR--IKARAGYKVNPQGLLYGTAGYADA---DTDNLGSD--- 177
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSK-----VEGFYNTISLGVGMKF 205
G G G E ++ ++ E ++ V+ T+ + V +F
Sbjct: 178 -NGWFIGAGYE-QIVAPNISVGGELLYHEFDDFNSTGVDVDATTLQVRVAYRF 228
>gi|163849581|ref|YP_001637624.1| porin [Methylobacterium extorquens PA1]
gi|163661186|gb|ABY28553.1| porin [Methylobacterium extorquens PA1]
Length = 283
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/252 (19%), Positives = 76/252 (30%), Gaps = 73/252 (28%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ V S A +A AAD +R +P ++G YAG++A
Sbjct: 1 MLKTVLARSAAAFVSTAAVAADLPQREQTPVFAQIPA----------FTWSGFYAGIAAG 50
Query: 64 Y----------------------NGSFGEEAHHNAGGSIFA--GYNVED---SCIMYGVE 96
Y FG G ++ GYN + + + G+E
Sbjct: 51 YAFSGRQTVRTTDFTPIGQAVLAASGFGAVRSEQEGATVAGGFGYNYQFTPGTGFVAGIE 110
Query: 97 GDVRYTVPVLADNIHSLHG-------------IGGSLRIRGGYEVSDSLLLYATVGPDVA 143
D++YT + + G G++R R GY + +L+Y T G
Sbjct: 111 TDIQYTDLDSSRATSASVGGTTFFLSGRQSLNFLGTVRGRLGYAF-NRVLVYGTGGFAYG 169
Query: 144 Q-------------KYETGKAGEITPIAIGGTAGVGVEVGGLSES---------LVARLE 181
AG + G G GVE +ES ++ + E
Sbjct: 170 NVNYEINANVTSALGTIPFDAGRFNNVETGYVYGGGVEYAMPTESFLNFFSANAVIIKAE 229
Query: 182 YRASKYSKVEGF 193
Y F
Sbjct: 230 YLHYDLGSRSVF 241
>gi|296447975|ref|ZP_06889882.1| porin [Methylosinus trichosporium OB3b]
gi|296254542|gb|EFH01662.1| porin [Methylosinus trichosporium OB3b]
Length = 308
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/234 (19%), Positives = 63/234 (26%), Gaps = 74/234 (31%)
Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS------------------FGEEAH 73
H +P+IA P + G Y G + Y FG +
Sbjct: 18 HAVAADLPSIAPPPPPPPVFSWTGAYLGANGGYIWGARNGVDSYGVAVIDKDPLFGATSA 77
Query: 74 HNAG-----------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN------------ 109
G G AGYN + + GVEGDV+ T ++
Sbjct: 78 LGVGNVAAPNLNGAFGGGQAGYNYQVSPRFVIGVEGDVQGTAVQGSEGRYRLLTVPNLPR 137
Query: 110 --------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ--------------KYE 147
+ ++R R G+ V LLY T G +
Sbjct: 138 YSIGTQTQVDRNIDYLATVRGRVGFAVLPDALLYLTGGLAFGRVSQRVTQTQSVYWAGST 197
Query: 148 TGKAGEI---------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
A +G AG GVE + A+LEY V
Sbjct: 198 NFPADSDGFGFAASQFAQTRVGWAAGGGVE-WAFRGNWSAKLEYLYYDLGGVRS 250
>gi|209885046|ref|YP_002288903.1| hypothetical protein OCAR_5916 [Oligotropha carboxidovorans OM5]
gi|209873242|gb|ACI93038.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 574
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 69/217 (31%), Gaps = 46/217 (21%)
Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH 74
A C A +A VVP A+ P+ ++ G Y G G + +
Sbjct: 11 TALACLAVSALAFTNVEAREARVVPVSAS----PVLWNWTGFYLGAHLG-AGFGTSKVDN 65
Query: 75 NAGGSIF--------------AGYNVEDSC--IMYGVEGDVR------------YTVPVL 106
G SI+ GYN + + ++GVE DV Y+ +
Sbjct: 66 PYGPSIYGDTIRLPGGFAGLQGGYNWQGAGSPWVFGVEADVSAVNADGTNTCLAYSGQFV 125
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSD--SLLLYATVGPDVAQK----------YETGKAGEI 154
+ N + GS+ R G +S L Y G Y + E
Sbjct: 126 SANCRARQQAMGSITGRIGRTISPDGRTLAYIKGGTAFMSGDLSLTTNAPDYILQPSSER 185
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
G G G+E ++ + + EY + + +
Sbjct: 186 RDTRWGWMLGAGLE-HAITGAWSVKAEYAYANFGHRD 221
>gi|159185257|ref|NP_355480.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140518|gb|AAK88265.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 66/219 (30%), Gaps = 24/219 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M + ++ ++A+A +A +AD ++G Y G
Sbjct: 1 MSIIKKSLAAVTIAVAIASNAYSADLTNYNTQQSFDYGNQ--------PAFSWSGAYVGA 52
Query: 61 SALYNGSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG 117
G G + AGYN + + G E + Y N
Sbjct: 53 HGGVASPKFSPLASGRGLTGGVQAGYNFQFGSGVVGAEVEGSYLGNDARVPNGRLRERFR 112
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
G+ +++ G + D LLY T G + + G G GVE L
Sbjct: 113 GAAKLKAGVAL-DHTLLYGTAGLTTTKFKDGNGVTGPDGWKQGYLVGAGVE-QSFGGGLS 170
Query: 178 ARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205
A+ EY V + + I G+ +F
Sbjct: 171 AKFEYNYVSTGNVATTTSSGRSKTDVSDHVIKAGLNYRF 209
>gi|192291529|ref|YP_001992134.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris TIE-1]
gi|192285278|gb|ACF01659.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris TIE-1]
Length = 246
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 62/195 (31%), Gaps = 36/195 (18%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF----------------GEEAHHNAGG--SI 80
P + +D++G Y G + + S GE H +GG
Sbjct: 28 PYTKAPPIIAAAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGG 87
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDS 131
AGYN + S ++GVE + ++ S G R GY ++
Sbjct: 88 QAGYNWQISNWVFGVEAQGNWADFKGSNVSLLVVPGTTNDSKIDAFGLFTARVGYAW-NN 146
Query: 132 LLLYATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
LLY G V T + G G G+E G S + +EY
Sbjct: 147 ALLYVKGGAAVTSDKYTVYGNRTGAITDTASETRWGAAVGGGLEY-GFSPAWTFGVEYDH 205
Query: 185 SKYSKVEGFYNTISL 199
+ + T S+
Sbjct: 206 LFMGSRDITFATTSI 220
>gi|312114480|ref|YP_004012076.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311219609|gb|ADP70977.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 288
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 67/247 (27%), Gaps = 72/247 (29%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
L S++AL + + P++ + + + G Y G
Sbjct: 2 TLTKFALASTVALGTLAI-------AAQANAADIYTPSMKDAPIIVVPPTWTGFYFGGHL 54
Query: 63 LYNGSFGEEAHHN-------------------------AGGSIFAGYNVEDS-CIMYGVE 96
+ E + GG F GYN + + G+E
Sbjct: 55 GAAWTQLETRKNEYWDGYDDSDLSFATFGGKNLNDQSAFGGGQF-GYNWQTGGNFVLGIE 113
Query: 97 GDVR--------------YTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135
D+ Y + N+ S G G + R GY ++ LLY
Sbjct: 114 VDIGGLGSDNERTFLATTYNDVTFSSAYSTAVVNVKSEGGFYGDVTGRLGYAWGNT-LLY 172
Query: 136 ATVGPDVAQKYET---------------GKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
A G Q + G T G G+E L+ + ++
Sbjct: 173 AKGGFAWIQPELKVRTVVSIDDDPNGTYTSSHTYDDTLTGWTIGGGLEFL-LNPNWSVKV 231
Query: 181 EYRASKY 187
EY +
Sbjct: 232 EYLHYDF 238
>gi|146340933|ref|YP_001205981.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193739|emb|CAL77756.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 251
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 83/233 (35%), Gaps = 46/233 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L +G ++ A AAD R G++ TI +D++G Y GL
Sbjct: 1 MRRL--LLGATTSLALGLAPAIAADLPARTFTKAPGMIATI---------YDWSGFYLGL 49
Query: 61 SALYNGSFGEEAHHNAGGSIFA------------------GYNVEDSCIMYGVEGDVRYT 102
+A + ++ G + A GY + ++GVEG +
Sbjct: 50 NAGGGSARTCWTNNVTVGGVAATNAEGCHDATGALAGGQIGYRWQAGSWVFGVEGQGNWA 109
Query: 103 VPVLAD------NIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQKYETG----- 149
++ + + + G L + GY +++L Y G VA + G
Sbjct: 110 NLKGSNTSQLAPAVTNQTKVNGVGLLTGQIGYAW-NNVLWYVKGGAAVAGEKYNGLATAT 168
Query: 150 --KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
+ + G T G GVEV G +++ EY ++ I G
Sbjct: 169 GTAFDQASATRWGATVGTGVEV-GFAKNWSVGAEYEHIFMGNKNLNFSGIPAG 220
>gi|92117214|ref|YP_576943.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
gi|91800108|gb|ABE62483.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
Length = 238
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 65/204 (31%), Gaps = 38/204 (18%)
Query: 38 VPTIATNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHNAG---GSIFAGYNVED-SCI 91
T A Y P + +++ G Y G + G G + G + + +
Sbjct: 27 PYTKAPPPYTPPQAVYNWTGFYIGGHLGGAFGGDSSLSGSDGRFLGGVQGGADYQFANNW 86
Query: 92 MYGVEGDVRYTVPVLADNIHSLHGIG-------GSLRIRGGYEVSDSLLLYATVGPDV-- 142
+ G E + + I GS+ R GY LLYA G
Sbjct: 87 VLGAEAQYSWLTNNNGGAVFPGGNIVTGNDRGLGSVTGRLGYAW-GPTLLYAKGGYAFRD 145
Query: 143 AQKYETGKAGEITPIA------IGGTAGVGVEVGGLSESLVARLEYRASKYSKV------ 190
++ T AG A G T G G+E + + A++EY+ + K
Sbjct: 146 SRLGVTDAAGVPLAFATTGNRDNGYTVGAGLEY-MFAPNWSAKVEYQYYNFGKTTFAAGS 204
Query: 191 ---------EGFYNTISLGVGMKF 205
+T+ G+ +F
Sbjct: 205 PTDIVGTSFRNDDHTVKAGLNYRF 228
>gi|323137744|ref|ZP_08072820.1| porin [Methylocystis sp. ATCC 49242]
gi|322397041|gb|EFX99566.1| porin [Methylocystis sp. ATCC 49242]
Length = 506
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 69/217 (31%), Gaps = 39/217 (17%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+KL V ++L+ A AA+ + T+ Y+ F G
Sbjct: 1 MRKLAPIVVFTALSF----PAFAAEAPSEEDAPPAAPPRPLWTSFYIGFNRGFGGGVLDS 56
Query: 61 SALY--------NGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV-------- 103
+ + GY + + G+E D +++
Sbjct: 57 DVGFVSAVPGLSTATTTTNRASGFIAGGQFGYTYSFANHFVLGLESDFQWSDMRSSHQAT 116
Query: 104 -------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG------- 149
+ +IHS GS R R GY V LL Y T G Q +G
Sbjct: 117 TFATNPALITNADIHSGIDWFGSTRARAGYSV-GRLLPYVTGGVAYGQVQSSGVQFLGSG 175
Query: 150 --KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
G T +G G G+E L+ +L A+ EY
Sbjct: 176 LATTGSRTNTRVGWAMGGGIEF-ALNSNLSAKAEYLY 211
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 56/186 (30%), Gaps = 44/186 (23%)
Query: 49 IRHDFNGPYA--------------------GLSALYNGSFGEEAHHNAGGSIFAGYNVE- 87
+D+ G Y G L + G GYN +
Sbjct: 276 PSYDWTGFYVGINGGYGGGVVTGSTTFVQPGAPGLAETTTASNRTAGYVGGAQGGYNYQL 335
Query: 88 DSCIMYGVEGDVRYTVPVLA--------------DNIHSLHGIGGSLRIRGGYEVSDSLL 133
I+ GVE D +++ N + G+ R+R GY S + L
Sbjct: 336 TKNIVVGVETDAQWSDVKAQHQAATIGGPLGFVYTNTPNDVSWFGTTRLRAGYA-SGNAL 394
Query: 134 LYATVGPD-------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
Y T G +Q G + G G G L+++L R EY
Sbjct: 395 SYVTGGVAYGEVNAHGSQISGGVFGGSASQNKAGWALGGGAMY-ALTKNLSMRAEYLYVS 453
Query: 187 YSKVEG 192
+S V G
Sbjct: 454 FSGVSG 459
>gi|116254616|ref|YP_770452.1| putative outer-membrane immunogenic protein precursor [Rhizobium
leguminosarum bv. viciae 3841]
gi|115259264|emb|CAK10397.1| putative outer-membrane immunogenic protein precursor [Rhizobium
leguminosarum bv. viciae 3841]
Length = 226
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 34/226 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+++ +VGVS L +A AD VP+ + P + G YAGL
Sbjct: 14 IKRKIFSVGVSMLMACGASAADLAD----------HSVPSAPS-YDAPGTFSWAGAYAGL 62
Query: 61 SALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG 117
S ++ ++ A GYN + ++G E + Y V +
Sbjct: 63 HGGVAASKFNPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVESRFR 122
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY---ETGKAGE----ITPIAIGGTAGVGVEVG 170
G+ + + G D +Y T G + + + G G GVE
Sbjct: 123 GAAKAKAGLGF-DRTFVYGTAGVTTTEFEGHRLVSGSDKWKSGPDSWKHGYLFGGGVE-H 180
Query: 171 GLSESLVARLEYRAS-----------KYSKVEGFYNTISLGVGMKF 205
S + A++EY S+ + N I G+ +F
Sbjct: 181 AFSGGVSAKIEYNYVINNAVPTTSGGISSRSDLNDNVIEAGLNFRF 226
>gi|312113978|ref|YP_004011574.1| outer-membrane immunogenic protein precursor; secreted protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311219107|gb|ADP70475.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Rhodomicrobium vannielii ATCC 17100]
Length = 243
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 75/219 (34%), Gaps = 41/219 (18%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ V +L +A+ A D + A G + YV + ++ G Y G + Y
Sbjct: 4 KAILTVVTLTVAATGGVNATDIAKSAPGGLKDAP-------YVEVPWNWAGAYYGATIGY 56
Query: 65 NGSFGEEAH-------------HNAGGSIFA---GYNVE-DSCIMYGVEGDVRYTVPVLA 107
GS G +A ++ G + GYN + + G E D +
Sbjct: 57 -GSGGSKASVTANANDEHGVDTNDPDGVLLGGTIGYNYQIAPTWLIGAEADFSWLGLQGD 115
Query: 108 ------DNIHSLHGIGG--SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI-- 157
D + G G +LR R GY + L+Y T G ET
Sbjct: 116 QGKAVFDGHYWTGGWDGLFTLRGRLGYTM-GRTLIYGTAGYAALHTNETISGNNTNESSF 174
Query: 158 ----AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
G G GVE L+E L + EY + + + G
Sbjct: 175 GTDWRSGWVVGGGVE-HFLTERLSVKAEYLHAGFEDLTG 212
>gi|146343440|ref|YP_001208488.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146196246|emb|CAL80273.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 242
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 59/210 (28%), Gaps = 39/210 (18%)
Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS---------FGEEAHHNAGGSIFAG 83
G R YV +++ G Y G S G ++ G + AG
Sbjct: 25 GARSYPYATKAPAYVAPIYNWTGFYLGAHLGGAFSSDNNFSGLGTGNNSNGRFLGGVQAG 84
Query: 84 YNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYA 136
+ + + G EG + + + GS+ R GY LLY
Sbjct: 85 ADWQFAPTWVIGAEGQYSWLSGSVGAAFPGGYVYNNSQRGLGSITGRVGYTW-GPGLLYV 143
Query: 137 TVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G + E G T G G+E + + A+ EY+ +
Sbjct: 144 KGGYAYSDNNEKVTLAGNQVGFATSGDHRNGWTVGGGIEY-MFAPNWSAKAEYQYYNFGS 202
Query: 190 V--------------EGFYNTISLGVGMKF 205
+T GV +F
Sbjct: 203 ATFAAPAALVPTGSFTTDDHTFKAGVNYRF 232
>gi|85714675|ref|ZP_01045662.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698560|gb|EAQ36430.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 222
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 56/176 (31%), Gaps = 28/176 (15%)
Query: 51 HDFNGPYAGL----------SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV 99
+++ G Y G + G G + GY+ + ++G+E
Sbjct: 41 YNWTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEA-- 98
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
L + GS+ R GY LLY G A T G
Sbjct: 99 --NYSFLDTGSFFANRGLGSVTGRLGYTW-GPALLYVKGGYGWADSRFTNGFGGNGGRDG 155
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKV----------EGFYNTISLGVGMKF 205
T G G+E +++ ++EY+ V +TI +G+ +F
Sbjct: 156 -YTVGGGLEYL-FTQNWSGKVEYQYYDLGTVNLVAPVVANFRNDQHTIKVGLNYRF 209
>gi|323138453|ref|ZP_08073522.1| porin [Methylocystis sp. ATCC 49242]
gi|322396249|gb|EFX98781.1| porin [Methylocystis sp. ATCC 49242]
Length = 502
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 68/217 (31%), Gaps = 49/217 (22%)
Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-------------- 66
+ AA P + + P + G + G + + G
Sbjct: 8 SFAALPTIALSAQAADLPAQKSPPPAPPPVFSWTGFHLGFNRGFGGAVSEARVALAAPGL 67
Query: 67 ------SFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA------------ 107
+F + + GG I GY+ + ++ GVE D++++ +
Sbjct: 68 GGTATRTFDQASGWFVGGQI--GYDYQFENGVVLGVETDMQWSDIRSSHQATTIASNPLL 125
Query: 108 ---DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK---------AGEIT 155
+ G+ R R GY +L Y T G Q G G
Sbjct: 126 LTNADTSHSLDWFGTTRGRVGYSF-GRMLPYLTGGVAYGQVEARGAQALAAGLVSVGGAR 184
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
+G AG G++ LS L AR EY + V G
Sbjct: 185 ETNVGWAAGAGLDF-ALSPRLSARAEYLYLQLPGVSG 220
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 39/125 (31%), Gaps = 23/125 (18%)
Query: 89 SCIMYGVEGDVRYTV--------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134
+ GVE D +++ + + + G+ R R G L
Sbjct: 336 DRFVVGVETDAQWSGVQAWHQATTVGGPNGYVFTDTPNAMTWFGTTRARLGLA-RGYSLS 394
Query: 135 YATVGPD-------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
Y T G Q G +G T G G E L+ +L R +Y +
Sbjct: 395 YVTGGVAYGEITASGTQAAGALFTGAGARSQVGWTVGSGTEY-ALAPNLSLRADYLYVSF 453
Query: 188 SKVEG 192
+ V G
Sbjct: 454 AGVSG 458
>gi|85713860|ref|ZP_01044849.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698986|gb|EAQ36854.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 224
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 56/176 (31%), Gaps = 28/176 (15%)
Query: 51 HDFNGPYAGL----------SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV 99
+++ G Y G + G G + GY+ + ++G+E
Sbjct: 43 YNWTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEA-- 100
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
L + GS+ R GY LLY G A T G
Sbjct: 101 --NYSFLDTGSFFANRGLGSVTGRLGYTW-GPALLYVKGGYGWADSRFTNGFGGNGGRDG 157
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKV----------EGFYNTISLGVGMKF 205
T G G+E +++ ++EY+ V +T+ +G+ +F
Sbjct: 158 -YTVGGGLEYL-FTQNWSGKVEYQYYDLGTVNLVAPVVANFRNDQHTVKVGLNYRF 211
>gi|296445629|ref|ZP_06887584.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium
OB3b]
gi|296256874|gb|EFH03946.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium
OB3b]
Length = 225
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 22/167 (13%)
Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYNVEDS-CIMYGVEGDV 99
P + G Y G+ Y ++ + G + GYN + G+E D
Sbjct: 38 PPAFTWRGFYVGVHGGYGFGAFQDNGRSLLGEPNGWLVGVTGGYNYTFGPNFLIGLEADF 97
Query: 100 RYTVPVLAD----NIHSLHGIGG--SLRIRGGYEVSDSLLLYATVGPDV------AQKYE 147
++ + G+ +LR R G + D L+Y T G
Sbjct: 98 DFSGGKGGGSPIAGVVGSSGVDNIMTLRPRAGM-IFDRALVYVTGGFAGVVASGTVGNVY 156
Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
G G+ + G G G+E GL+ +L A+ EY + F
Sbjct: 157 NGFFGQQSQYLSGWALGAGIEY-GLAPNLSAKAEYLFTSVGGERYFE 202
>gi|170751779|ref|YP_001758039.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170658301|gb|ACB27356.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 279
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 64/220 (29%), Gaps = 58/220 (26%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
L V + +A SA AAD RRA + G Y G++A Y
Sbjct: 5 LRVTTALAGVAFAGSAFAADLPRRAAPPPVFTP---------VPVFTWTGAYFGINAGYA 55
Query: 66 ------------------------GSFGEEAHHNAGGSIFAGYNVE---DSCIMYGVEGD 98
SF + G GYN + S ++ GVE D
Sbjct: 56 FDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEAD 115
Query: 99 VRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+Y N S G++R R GY D L+Y T G
Sbjct: 116 AQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAF-DRTLVYGTGGF 174
Query: 141 DVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177
G G AG G+E ++S +
Sbjct: 175 AYGSGSADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFL 214
>gi|255264610|ref|ZP_05343952.1| putative outer membrane protein [Thalassiobium sp. R2A62]
gi|255106945|gb|EET49619.1| putative outer membrane protein [Thalassiobium sp. R2A62]
Length = 207
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 17/180 (9%)
Query: 40 TIATNRYVPIRHDFNGPY-------AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ D++G Y AG + Y+ + F G N + S ++
Sbjct: 30 PVIAIPPTSNVTDWSGSYCGLSYSSAGGTLSYSFGSPYDYVDETAIGGFCGNNWQRSNLV 89
Query: 93 YGVEGDV-RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151
YG E +V ++ N+ G LR R GY + D L+Y +G ++ G A
Sbjct: 90 YGGELNVTGGSLGHDDINVVGELGTRIELRTRVGYALGD-ALVYGFLGYGRSEITWGGNA 148
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY------SKVEGFYNTISLGVGMKF 205
+A GGT G+GV+ +++S+ A E + V N ISL +G KF
Sbjct: 149 PGEYGVA-GGTYGLGVDY-MVTDSMFASFEVSNLELKETVTTGIVTHDINVISLRIGWKF 206
>gi|218533177|ref|YP_002423993.1| porin [Methylobacterium chloromethanicum CM4]
gi|218525480|gb|ACK86065.1| porin [Methylobacterium chloromethanicum CM4]
Length = 299
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 74/302 (24%), Gaps = 114/302 (37%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG--- 66
++ L A AAD G P A D++G Y G Y+
Sbjct: 6 LALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVGGHGGYSSAAL 59
Query: 67 SFGE-----------------------------EAHHNAGGSIFAGYNVEDSCIMYGVEG 97
FG A +FAG N + ++ G E
Sbjct: 60 GFGNAFQPIVANALRYTVAEAEMNASHLLAARATHSGGASYGVFAGVNYQFEDVVVGFEA 119
Query: 98 DVRY----------------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
D Y + L+ + G++R R GY + L +
Sbjct: 120 DYTYFGQSGTTSDQIARYMITKDNFLSTVNLSGQASTKIQDYGTIRGRLGYAFGN-FLPF 178
Query: 136 ATVGPDVAQKYETGK--------------------------------------------- 150
T G + +
Sbjct: 179 VTGGLALGRATVRDTVTIQDYGYNNTTYAANQTGTTKSYIDNDGYSVFFQNNPPGSIPAP 238
Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFYNTISLGVGM 203
G G G+E ++ + + R EY+ + + + NT+ G +
Sbjct: 239 GTVHGTTKKVTVAGIAVGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAELNTVRGGAAV 297
Query: 204 KF 205
KF
Sbjct: 298 KF 299
>gi|319405308|emb|CBI78922.1| putative Hemin binding protein b [Bartonella sp. AR 15-3]
Length = 367
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 24/115 (20%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------------KYETGKAGEIT--PIA 158
G+ RIR G + ++ Y G + E A
Sbjct: 255 KQKWIGTSRIRLGLS-AGRVMPYIAGGIAYTKIQGTFAKSIKEIGKENTSASSFDSAETM 313
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------GFYNTISLGVGMKF 205
IG T G G + +++ ++ R EYR S + + + N +G+ KF
Sbjct: 314 IGYTLGGGFDF-AMTDRILLRSEYRYSDFGEKKFNKINLKYYKTNDFRVGLAYKF 367
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 32/120 (26%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF- 68
VS LA++ QAAD V VP+ + P+ + + G Y G SF
Sbjct: 3 VSILAISLTSRIQAADIV----------VPSNLKSISAPV-YSWEGFYLGGQMGSFSSFT 51
Query: 69 ------------GEEAHHNAG-------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLAD 108
+ G FAG+N + + G++ D+ ++
Sbjct: 52 TLQYNDIDKTKKWNSIDEDFSSDLSGITGGFFAGFNFDWGNRFVLGIDTDIVFSNKRNTK 111
>gi|209885358|ref|YP_002289215.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans
OM5]
gi|209873554|gb|ACI93350.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans
OM5]
Length = 173
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 52/165 (31%), Gaps = 23/165 (13%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSAL--YNGS----------FGEEAHHNAGGSIFAGYNV 86
T A V +++ G Y G + G+ G + G G N
Sbjct: 11 YTKAPPAPVAPIYNWTGLYIGAQVGGAFQGNSGFVTDNPLVTGNRDDSSFLGGGVLGANY 70
Query: 87 E-DSCIMYGVEGDVR------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
+ + G+EG+ YT D I + S+ R GY ++Y G
Sbjct: 71 QFSPNWVLGIEGEFNGLSNNRYTFTDGFDGIRVKNDWLASVTGRLGYTW-GPGMIYPKGG 129
Query: 140 PDVAQKYETGKAGEI--TPIAIGGTAGVGVEVGGLSESLVARLEY 182
+ G T G G+E + + A++EY
Sbjct: 130 VAFRDNGGIAATTPFLVSRDTSGYTVGAGLEY-MFAPAWSAKIEY 173
>gi|39936789|ref|NP_949065.1| hypothetical protein RPA3728 [Rhodopseudomonas palustris CGA009]
gi|39650646|emb|CAE29169.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 670
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 66/215 (30%), Gaps = 55/215 (25%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG---------------------SIF 81
D++G Y G + AGG +
Sbjct: 29 APEAPRAVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQ 88
Query: 82 AGYNVEDSC-IMYGVEGDVR-------YTVPVLADNIHSLHG----IGGSLRIRGGYEVS 129
AGYN + G+E D+ T L H +GG++R R GY
Sbjct: 89 AGYNWMLPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAF- 147
Query: 130 DSLLLYATVGPDVAQKYET---GKAGEITPIA----IGGTAGVGVEVGGLSESLVARLEY 182
D L Y T G + + A +G AG GV+V LS + AR EY
Sbjct: 148 DGWLPYVTAGFAWSYDRLRWPPDPSLAQQETALLWRLGWAAGAGVDVP-LSPAWSARAEY 206
Query: 183 RASKYS-------------KVEGFYNTISLGVGMK 204
A+ + + + + LG+ +
Sbjct: 207 LATGFGSGTVSFPIAGQSVSSDVLTHAVRLGLNYR 241
>gi|192292615|ref|YP_001993220.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
gi|192286364|gb|ACF02745.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
Length = 670
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 66/215 (30%), Gaps = 55/215 (25%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG---------------------SIF 81
D++G Y G + AGG +
Sbjct: 29 APEAPRAVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQ 88
Query: 82 AGYNVEDSC-IMYGVEGDVR-------YTVPVLADNIHSLHG----IGGSLRIRGGYEVS 129
AGYN + G+E D+ T L H +GG++R R GY
Sbjct: 89 AGYNWMLPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAF- 147
Query: 130 DSLLLYATVGPDVAQKYET---GKAGEITPIA----IGGTAGVGVEVGGLSESLVARLEY 182
D L Y T G + + A +G AG GV+V LS + AR EY
Sbjct: 148 DGWLPYVTAGFAWSYDRLRWPPDPSLAQQETALLWRLGWAAGAGVDVP-LSPAWSARAEY 206
Query: 183 RASKYS-------------KVEGFYNTISLGVGMK 204
A+ + + + + LG+ +
Sbjct: 207 LATGFGSGTVSFPIAGQSVSSDVLTHAVRLGLNYR 241
>gi|91978079|ref|YP_570738.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91684535|gb|ABE40837.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 235
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 32/182 (17%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSA---------LYNG----SFGEEAHHNAG--GSIFAGY 84
+ VP +++ G Y G++ Y G + + AH+ G G + G+
Sbjct: 26 PLKAAPPVPALYNWTGVYIGINGSAVLSDKRWDYFGPLLPTGDDGAHNFTGLFGGVQVGF 85
Query: 85 NVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSLLLYA 136
+ + ++GVE + + +L G + R GY + ++ LLY
Sbjct: 86 DYQVGSWVFGVEAQGDWGRARGTSDSLLFANQTNRTLIDAFGLINGRFGYAL-NNALLYV 144
Query: 137 TVGPDVAQKYETGKAGE-------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G V Q+ A + + G T G G+E SE + EY
Sbjct: 145 KGGAGVVQEKYDVFATDTGVTFTNASETRWGSTVGAGLE-LAFSEHISVAAEYNHIFLGS 203
Query: 190 VE 191
+
Sbjct: 204 RD 205
>gi|310816178|ref|YP_003964142.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308754913|gb|ADO42842.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 202
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 15/163 (9%)
Query: 52 DFNGPYAGLSALYNGSFG-----EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106
+ G YAG + Y + G E+ G ++ GY+ + + G+ + Y
Sbjct: 46 TWAGAYAGAALTYGETEGSVGGTSESIDGVGVALRGGYDWQFGSWVLGLGAEYAYNNEDG 105
Query: 107 AD-NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+ ++ R GY + D+ L Y + G + G + + G T GV
Sbjct: 106 DVFGATAERKDSAAVFARAGYAL-DTWLPYVSAGYTWSDAEVAGTSYD----LEGATYGV 160
Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
GVE ++++ EY + + V+G + LGV +F
Sbjct: 161 GVE-KLFTQNISGFAEYSFADFDDVQGVSVEGQGVKLGVNYRF 202
>gi|149914031|ref|ZP_01902563.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b]
gi|149812315|gb|EDM72146.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b]
Length = 189
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 20/178 (11%)
Query: 22 QAADPVRRAHHGGRGVVPTIATNR-------YVPIRHDFNGPYAGLSALY---NGSFGEE 71
AA + P P D+ GPY G + + +
Sbjct: 1 MAALALATGPALAGSATPPEPDPVISTPAPPPAPSSPDWTGPYVGGQIGWGNVDTNLPGV 60
Query: 72 AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
+ + G + AGY+ + + G D + L +L + ++ RGGY++ +
Sbjct: 61 SGDDVIGGLIAGYDYDFGQWVVGGGLDYDWADIGLGAGNPTLENVF-RVKARGGYKIGNG 119
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
LLY T G A +T G+ G G G E ++ ++ E ++
Sbjct: 120 -LLYGTGGWAQA---DTSTLGDDD----GYFIGAGYE-HMVTPNVSLGGEVLYHEFDN 168
>gi|27382806|ref|NP_774335.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355979|dbj|BAC52960.1| blr7695 [Bradyrhizobium japonicum USDA 110]
Length = 288
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 54/176 (30%), Gaps = 31/176 (17%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALY------------NGSFGEEAHHNAGGSIFA--G 83
T A V +D+ G Y G + + G+ +GG + G
Sbjct: 64 PYTKAPPPVVAPIYDWTGFYIGANGGWGQSHSCVDFVTALGTVASGCGDRSGGVVGGQIG 123
Query: 84 YNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135
Y + S ++G+E + + + G + G+ +S LLY
Sbjct: 124 YRWQTSQFVFGLEAQGDWADLKNTRVSLFNPTLSTTAKTDAIGLFTGQLGWAW-NSALLY 182
Query: 136 ATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
G V T GGT GVG E G + + +EY
Sbjct: 183 VKGGAAVTSNRLTIFDNTTGIGLVSADNTRWGGTLGVGFEY-GFTPNWSVGVEYDH 237
>gi|86748027|ref|YP_484523.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2]
gi|86571055|gb|ABD05612.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2]
Length = 638
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 59/221 (26%), Gaps = 45/221 (20%)
Query: 29 RAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-----------GSFGEEAHHNAG 77
A V +++ G + G S G+ + A
Sbjct: 410 EAVAAAPLYTKAAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAI 469
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVS 129
G GY+ + + GVEG + T A + G+ + GY
Sbjct: 470 GGGQIGYDYQFGKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFW 529
Query: 130 DSLLLYATVGPDVAQKYETGK--------------AGEITPIAIGGTAGVGVEVGGLSES 175
D L Y G T + G T G+G E LS++
Sbjct: 530 DRSLWYVRGGGAFGDLKVTTTCNTGPFNPLGLAGCGENASRSRAGWTIGIGSEF-ALSKN 588
Query: 176 LVARLEYRASKYS---------KVEGFYNTI--SLGVGMKF 205
R E ++ N ++GV +F
Sbjct: 589 WTVRTETNYFDMGRERYVLPTSTIDVKQNGFISTVGVNYRF 629
>gi|27380621|ref|NP_772150.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353786|dbj|BAC50775.1| outer-membrane immunogenic protein precursor [Bradyrhizobium
japonicum USDA 110]
Length = 237
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 44/201 (21%)
Query: 43 TNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHNAG-----GSIFAGYNVED-SCIMYG 94
Y P + +++ G Y G G+F ++ + G + G++ + + G
Sbjct: 33 APAYTPPQVIYNWTGFYIGGHVG--GAFAGDSSFQSSDARFLGGVQGGFDYQFAPNWVVG 90
Query: 95 VEGDVRYTVPVLADN---------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD---V 142
VE +Y+ +N + S GS+ R GY L+YA G
Sbjct: 91 VEA--QYSWLPTNNNGVTFPLGTQVTSNTDQLGSVTGRIGYTW-GPALVYAKGGYAWRNG 147
Query: 143 AQKYETGKAGEI-TPIAI---GGTAGVGVEVGGLSESLVARLEYRASKYSKV-------- 190
+ T G T G G+E + S A+ EY+ +
Sbjct: 148 GLGVNVAGVPQGFTATGNNKDGYTVGAGLEY-MFAPSWSAKAEYQYYNFGSTTFTSGPAD 206
Query: 191 ------EGFYNTISLGVGMKF 205
+T+ +GV +F
Sbjct: 207 IVGVRGREDEHTVKVGVNYRF 227
>gi|319405140|emb|CBI78746.1| Hemin binding protein D [Bartonella sp. AR 15-3]
Length = 295
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 19/110 (17%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------EITPIAIGGTAG 164
G+ R+R G+ + ++ Y G + +G T G
Sbjct: 188 KEKWTGATRVRIGFS-AGHIMPYIAAGVSYVDLKDILSVSLFEREAETVEGKKMVGYTFG 246
Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
GV+V + +++V R EYR S + K N +GV KF
Sbjct: 247 GGVDVAMI-DNVVMRAEYRYSDFGKKKFAKGEVELSYKTNDFRVGVAYKF 295
>gi|188584272|ref|YP_001927717.1| porin [Methylobacterium populi BJ001]
gi|179347770|gb|ACB83182.1| porin [Methylobacterium populi BJ001]
Length = 274
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 73/229 (31%), Gaps = 65/229 (28%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + +G++ L+ +A AAD RRA +P + G Y G+
Sbjct: 1 MRNSLILIGLTGALLS--STALAADLPRRAEPPVFTPIP----------VFAWTGAYLGI 48
Query: 61 SALYNGSFGEEAH------------------------HNAGGSIFAGYNVE---DSCIMY 93
+A Y + + GYN + + ++
Sbjct: 49 NAGYAYTESDTLRTAGIGALQANVTNDLRRAAVGLPQDGFTVGGQGGYNFQLTPGTGFVF 108
Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
G+E D +Y VL + + G++R R GY D +L+Y T
Sbjct: 109 GLEVDAQYMDLQRSRTETIFRPAFNPNVLTNVYAADLDFLGTVRGRIGYAF-DRVLVYGT 167
Query: 138 VGPDVA---------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
G AG + + G G G+E ++S +
Sbjct: 168 GGFAYGTVSQGVTFQTGAPVTYAGARSGVETGYAYGGGIEYALPTDSFL 216
>gi|27379782|ref|NP_771311.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352935|dbj|BAC49936.1| bll4671 [Bradyrhizobium japonicum USDA 110]
Length = 282
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 46/217 (21%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYNG 66
+ +++ L+ A AAD + VP + G Y G
Sbjct: 48 LVLTAALLSLATPAFAADIIA-----------PAPVKAPVPAAIFTWTGFYIGAHGGGAW 96
Query: 67 S-------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN---- 109
S + G N + ++ G+EG ++ L
Sbjct: 97 SKWTGIDPTDPTAVWTSVTASGGIVGGQIGGNYQIGNVVVGLEGTGAWSSVTLNAGGPFG 156
Query: 110 ------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET---------GKAGEI 154
+ + ++ R G D +LLYA G + +
Sbjct: 157 GGAGFTLSLKNDYIATVAGRFGVAF-DRVLLYAKGGAAFTRDKYNANNGLAGALAGSASG 215
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+ G AG GVE + R EY ++ +
Sbjct: 216 SFNRTGWLAGGGVE-WMFMPNWSVRAEYNYMGFAAIT 251
>gi|116255059|ref|YP_770894.1| putative outer membrane protein precursor [Rhizobium leguminosarum
bv. viciae 3841]
gi|115259707|emb|CAK11704.1| putative outer membrane protein precursor [Rhizobium leguminosarum
bv. viciae 3841]
Length = 216
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 23/193 (11%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
++ + V VS+L +A AD VP+ + P + G YAGL
Sbjct: 5 KRKIVFVIVSTLMARGASAADLAD----------HSVPSAPS-YDAPGTFSWAGAYAGLH 53
Query: 62 ALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGG 118
+++ ++ A GYN + ++G E + Y V G
Sbjct: 54 GGVAAPKFNPFNNDRAPAVGAQVGYNFQAGPGVFGAELEGSYLNNEVRVPGGKVESRFRG 113
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEIT------PIAIGGTAGVGVEVGG 171
+ + + G + D +Y T G + G G G GVE
Sbjct: 114 AAKAKAGLGL-DRTFIYGTAGVTTTEFEGRRPVFGSDKWKSGPESWKQGYLFGGGVE-HA 171
Query: 172 LSESLVARLEYRA 184
+ A++EY
Sbjct: 172 FPGGVSAKIEYNY 184
>gi|83308666|emb|CAJ01574.1| outer membrane protein [uncultured bacterium]
Length = 304
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 55/169 (32%), Gaps = 43/169 (25%)
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSC----IMYGVEGDV-------------------RY 101
GS H G GYN + + + G+E D+ +
Sbjct: 86 TGSISPVNHSGFIGGGQVGYNYQFNNSWSSWVAGIEADIQGVAASNSAHLVFGQAFVPGF 145
Query: 102 TVPVLADNIHSLH--GIGGSLRIRGGYEVSDSLLLYATVGPD---------VAQKYETGK 150
+ N+ S G++R R G+ + +LL Y T G + Q E
Sbjct: 146 AGSPIDQNLSSSMTGDFLGTVRGRLGFTIIPTLLFYGTGGLAYGQTDSRTSITQIVENDP 205
Query: 151 A--------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
A G I+ +G TAG G E + + ++EY V
Sbjct: 206 ALPNHYSSFGSISNSRVGWTAGGGGEWL-FAPNWSVKVEYLYYNLGSVS 253
>gi|323137952|ref|ZP_08073026.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322396671|gb|EFX99198.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 302
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 66/263 (25%), Gaps = 83/263 (31%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + + ++ + A AAD +P + P + G Y GL
Sbjct: 1 MKSIASSAVLTLSLIGG--GAFAADL----SSHKLPPLPELPAMETTP----WAGFYIGL 50
Query: 61 SALYNGSFG---------------------------------EEAHHNAGGSIFAGYNVE 87
+A + G GYN
Sbjct: 51 NAGGAWNASTAVNLLSAPVFVAPGIGEEIWAATSSFAASRALSTQAAGFIGGGQLGYNWR 110
Query: 88 -DSCIMYGVEGDVRYTVPVLADNIHSLH--------------------GIGGSLRIRGGY 126
+ GVE D++ + G++R R GY
Sbjct: 111 FSETFIAGVEADIQGVAGGANSARNVSLLPTPAAGLSYLTTLSASKRLDYLGTVRGRIGY 170
Query: 127 EVSDSLLLYATVGPDVAQKYETGK------------------AGEITPIAIGGTAGVGVE 168
V+ +LL YAT G AG + G T G G+E
Sbjct: 171 LVTPTLLAYATGGLAYGGVTARADFFQTIPNDTPGFELLAINAGRFSNTRAGWTVGGGLE 230
Query: 169 VGGLSESLVARLEYRASKYSKVE 191
S+ + EY V
Sbjct: 231 WMFSSD-WSLKAEYLYYDLGGVT 252
>gi|323137959|ref|ZP_08073033.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC
49242]
gi|322396678|gb|EFX99205.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC
49242]
Length = 837
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 44/151 (29%), Gaps = 34/151 (22%)
Query: 75 NAGGSIFAGYNVE-DSCIMYGVEGDV----RYTVPVLADNIHSLHG-------------- 115
G + G N + GVE D+ T + G
Sbjct: 642 GFIGGLQLGANWNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLN 701
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------KAGEITP-------IAIGG 161
G++R R GY + +LL+Y T G T +G
Sbjct: 702 YLGTVRGRLGYLATPTLLVYGTGGMAYGGVVSNTAIFTRRVGGTSQTQVNPVFQDTLVGW 761
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
+AG GVE L + A+++Y
Sbjct: 762 SAGGGVEWMFL-PNWSAKVDYLHYDLGNARA 791
>gi|220979417|gb|ACL97990.1| outer membrane protein B3 [Rhizobium leguminosarum bv. viciae]
Length = 216
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 67/194 (34%), Gaps = 23/194 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+++ +VGVS L +A AD VP+ + P + G YAGL
Sbjct: 4 IKRKIFSVGVSMLMACGASAADLAD----------HSVPSAPS-YDAPGTFSWAGAYAGL 52
Query: 61 SALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG 117
S ++ ++ A GYN + ++G E + Y V +
Sbjct: 53 HGGVAASKFNPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVESRFR 112
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY---ETGKAGE----ITPIAIGGTAGVGVEVG 170
G+ + + G D +Y T G + + + G G GVE
Sbjct: 113 GAAKAKAGLGF-DRTFVYGTAGVTTTEFEGHRLVSGSDKWKSGPDSWKHGYLFGGGVE-H 170
Query: 171 GLSESLVARLEYRA 184
S + A++EY
Sbjct: 171 AFSGGVSAKIEYNY 184
>gi|115524371|ref|YP_781282.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115518318|gb|ABJ06302.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris BisA53]
Length = 235
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 63/203 (31%), Gaps = 40/203 (19%)
Query: 39 PTIATNRYVPI--RHDFNGPYAGLSALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIM 92
P Y +++ G Y G + + + G + G + + + +
Sbjct: 27 PATKAPAYTAPEIVYNWTGFYIGGHVGGAFAGDDNITGSDGRFLAGVQGGADYQFARNWV 86
Query: 93 YGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
G+E +Y+ N + + GS+ R GY LLYA G
Sbjct: 87 VGIEA--QYSWLPTDGNGGLLYPGNTLVTQDNRGLGSVTGRLGYSW-GPALLYAKGGYAF 143
Query: 143 AQKYETGKAGEITPIAI------GGTAGVGVEVGGLSESLVARLEYRASKYSK------- 189
P A G + G G+E + + A++EY+ +
Sbjct: 144 RDSSIDVSNLGAQPFATSGNKKDGYSVGGGLEYL-FAPNWSAKVEYQYYNFGNTSFTGGP 202
Query: 190 -------VEGFYNTISLGVGMKF 205
V +T+ G+ +F
Sbjct: 203 PDIVGSSVRNDEHTVKAGINYRF 225
>gi|119383601|ref|YP_914657.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
gi|119373368|gb|ABL68961.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
Length = 199
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 28/196 (14%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ A S +A ++ A PV + D+ G YAGL
Sbjct: 1 MKKVGYAALASLIAGGAYAGGYVA-PVVEQPVV-------APAPVTITPESDWTGFYAGL 52
Query: 61 SALY-NGSFGE-----EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH 114
+G G + G + AGY + + G E D ++ + +
Sbjct: 53 QYGKGSGDLGNRGALADFGDYDGYGLHAGYQRDLGRFVLGGELDYN----KISPDENYDD 108
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
G LR+R G ++ L Y T+G + + G T G+G + ++E
Sbjct: 109 GDLTRLRLRAGADM-GRFLPYVTLGAA------KISVDDFSET--GLTYGLGADF-KVTE 158
Query: 175 SLVARLEYRASKYSKV 190
EY S + V
Sbjct: 159 RFTVGAEYSRSDFKDV 174
>gi|114706584|ref|ZP_01439485.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506]
gi|114537976|gb|EAU41099.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506]
Length = 243
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 27/158 (17%)
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-------------DNIH 111
+G+ E G + AGY+V+ + G D+ T ++ +
Sbjct: 66 DGTGFETTAGGGLGGVQAGYDVQLGRAVLGGVADISLTGIDADVSTRERAGGVETTNSAN 125
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-------------ITPIA 158
+ G++R R GY SD +L Y G + T E +
Sbjct: 126 TELDYLGTVRARAGYAASDRVLAYGHGGLAYGRTDTTISESERRGGVTNTQTESRKSDTK 185
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
G G G+E ++++ + EY K + ++
Sbjct: 186 YGYAVGAGLEYKA-TDNVSLQTEYGYHDLGKDRLYSDS 222
>gi|126736404|ref|ZP_01752146.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126714225|gb|EBA11094.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 211
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 24/156 (15%)
Query: 46 YVPIRHDFNGPYAGLS-----------ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94
D++G YAG SF + + S FAGY ++ + G
Sbjct: 27 PTVALADWSGAYAGAQLDVLTGDEVSLGFAAQSFEDVIETDTIISGFAGYQLQQGDFVIG 86
Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLR-----IRGGYEVSDSLLLYATVGPDVAQKYETG 149
E + V +++ G+ +R R GY++ D L+Y G ++ +
Sbjct: 87 GELSLGQANGVRFEDVD---GLDTDVRLVDVKARVGYDLGD-ALVYGVAGFSQSRLLDID 142
Query: 150 KA---GEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+ G + G G GV+ ++E EY
Sbjct: 143 EDDLEGLDLETSTGVNYGFGVDYR-VTEQFTVGAEY 177
>gi|326387856|ref|ZP_08209462.1| porin [Novosphingobium nitrogenifigens DSM 19370]
gi|326207902|gb|EGD58713.1| porin [Novosphingobium nitrogenifigens DSM 19370]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 19/173 (10%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGG------------SIFAGYNVED-SCIMYGVEG 97
FNGP+ G + + G +F G + + G +
Sbjct: 27 KTFNGPFIGAQGGWEENSVNNPSTGVGPTNLYGTGDTGTLGVFVGQDYRILKNFVIGGQA 86
Query: 98 DVRY--TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI- 154
+V + + L +R GY + D LLY G + A
Sbjct: 87 EVNFPINSHITDGTTTVDPKRSVDLSLRAGYVLRDKTLLYVRGGYSNVRASTIINAETPI 146
Query: 155 --TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ G G G+E +++ + R+EYR + S+ G ++ L +G+ +
Sbjct: 147 YVSGSQNGWMLGGGIE-QYVTKHITGRMEYRYTNLSEGAGKFDRHQLLLGVAY 198
>gi|240141692|ref|YP_002966172.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|240011669|gb|ACS42895.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
Length = 299
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 74/302 (24%), Gaps = 114/302 (37%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG--- 66
++ L A AAD G P A D++G Y G Y+
Sbjct: 6 LALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVGGHGGYSSAAL 59
Query: 67 SFGE-----------------------------EAHHNAGGSIFAGYNVEDSCIMYGVEG 97
FG A +FAG N + ++ G E
Sbjct: 60 GFGNAFQPIVATALRYSVVEAEMNASQLLAARSTHSGGASYGVFAGVNYQFEDVVVGFEA 119
Query: 98 DVRYTVPV----------------------LADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
D Y L+ + G++R R GY + LL +
Sbjct: 120 DYTYFGQSGTTSDQIARYMITKDNYLRTVDLSGQASTKIQDYGTIRGRLGYAFGN-LLPF 178
Query: 136 ATVGPDVAQKYETGK--------------------------------------------- 150
T G V +
Sbjct: 179 VTGGVAVGRATVHNTVTIQNYGYNNTIYATNQTGTTKSYIDNEGYSVFYQNNPPGSIPAP 238
Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFYNTISLGVGM 203
G G G+E ++ + + R EY+ + + + NT+ G +
Sbjct: 239 GTVHGTTKKVTVTGIAVGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAELNTVRGGAAI 297
Query: 204 KF 205
KF
Sbjct: 298 KF 299
>gi|91975493|ref|YP_568152.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris
BisB5]
gi|91681949|gb|ABE38251.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris
BisB5]
Length = 645
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 55/205 (26%), Gaps = 42/205 (20%)
Query: 22 QAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-----------GSFGE 70
A D + A + V +++ G + G S G+ +
Sbjct: 410 FAPDAIVAAPLYTK----AAKAPVLVRSAYNWTGFFIGGSFGALNGRTDWTFQPVGTRTD 465
Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRI 122
A G GY+ + + GVEG++ T A + G+
Sbjct: 466 PRFAGAIGGGQIGYDHQFGKWVVGVEGNLFATNANGARPCPNGVFFTCENNVSWMGTATA 525
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGK------------------AGEITPIAIGGTAG 164
+ GY D L Y G T + G T G
Sbjct: 526 KLGYAFWDRSLWYVRGGGAFGDLKVTTNCNTGPVVPNPAFLVVAGCGESASRNRAGWTIG 585
Query: 165 VGVEVGGLSESLVARLEYRASKYSK 189
G E LS++ R E +
Sbjct: 586 FGSEF-ALSKNWTVRAETNYFDMGR 609
>gi|86751789|ref|YP_488285.1| hypothetical protein RPB_4691 [Rhodopseudomonas palustris HaA2]
gi|86574817|gb|ABD09374.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 562
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 40/209 (19%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG- 78
++ A + A +P + + P++ + G Y G GSFG+ + + G
Sbjct: 5 ASTTAMLILAATTAAAADLPRLPLSPAAPVQWSWTGLYWGAHLG--GSFGQTSFSDPAGP 62
Query: 79 --------------SIFAGYNVEDS-CIMYGVEGDVR------------YTVPVLADNIH 111
I GYN + + + GVE DV + ++ N
Sbjct: 63 GLYGGQVRSPAALAGIQLGYNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISANCR 122
Query: 112 SLHGIGGSLRIRGGYEVSD--SLLLYATVGPD----VAQKYETGKAGEITPI---AIGGT 162
+L R G+ LLYA G G T G T
Sbjct: 123 VRQDALATLTGRAGFVTGPGGRTLLYAKAGAAFLSERLDITIGNPIGSSTESTDGRWGWT 182
Query: 163 AGVGVEVGGLSESLVARLEYRASKYSKVE 191
AG G+E L+ + + EY + + +
Sbjct: 183 AGAGIE-RALAPAWSVKFEYDYANFGSRD 210
>gi|323139010|ref|ZP_08074070.1| porin [Methylocystis sp. ATCC 49242]
gi|322395764|gb|EFX98305.1| porin [Methylocystis sp. ATCC 49242]
Length = 294
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 56/190 (29%), Gaps = 41/190 (21%)
Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRYTVPVL 106
H + AGLSA + + G GYN + + + GVE D++
Sbjct: 75 SPIHGWA---AGLSAT--SAPTSNNNSGFIGGGQIGYNWQFMNSFLVGVEADIQGVAGNS 129
Query: 107 ADNI--------------------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
S G++R R G+ + +LL+Y T G
Sbjct: 130 GSQNIFGASSDPFTGTTFATFGTRSSRLDYLGTVRGRLGWLFTPTLLVYGTGGLAYGGVS 189
Query: 147 ETG--------------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
+G TAG G E + A++EY V
Sbjct: 190 TNSSFVTSELGIGLSSVGGTTFADTRVGWTAGGGFE-WMFMPNWSAKVEYLYYDLGTVSA 248
Query: 193 FYNTISLGVG 202
+I VG
Sbjct: 249 SGASIEPVVG 258
>gi|83942577|ref|ZP_00955038.1| outer membrane protein, putative [Sulfitobacter sp. EE-36]
gi|83846670|gb|EAP84546.1| outer membrane protein, putative [Sulfitobacter sp. EE-36]
Length = 202
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 75/205 (36%), Gaps = 20/205 (9%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++ + LA +F A A + P A + + D+ G Y GL
Sbjct: 1 MKRTMKLASAAVLASTAFAGATYAGSLAEPVVEPVMTAPVPAPD----LGGDWTGFYTGL 56
Query: 61 SALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG 118
Y+ + + G AGYN + + G E D T L D G
Sbjct: 57 QLGYSDAEVDNGLEGDNGSYGFHAGYNYDFGRFVLGGELDYDKTDIDLDDAAGVTQGSID 116
Query: 119 SL---RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
S+ +I+GGY++ S L+YAT G A G+ G+G++ +
Sbjct: 117 SVARAKIKGGYDL-GSTLIYATGGYARADTSL----GDEDGAFY----GIGMDYKITEQY 167
Query: 176 LVAR--LEYRASKYSKVEGFYNTIS 198
V LE++ + V G ++
Sbjct: 168 SVGAELLEHKFDDVNGVSGDDADVT 192
>gi|27380105|ref|NP_771634.1| hypothetical protein blr4994 [Bradyrhizobium japonicum USDA 110]
gi|27353259|dbj|BAC50259.1| blr4994 [Bradyrhizobium japonicum USDA 110]
Length = 296
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 64/188 (34%), Gaps = 43/188 (22%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSAL--------------YNGSFGEEAHHNAGGSIFA- 82
T A V +D++G Y G++ GE H+ GG+I
Sbjct: 64 PYTKAPAPMVAAIYDWSGFYIGINGGGGSAHSCWDFVTPVTGTLVGEGCHNATGGTIGGQ 123
Query: 83 -GYNVEDSCIMYGVEGDVRY--------------TVPVLADNIHSLHGIGGSLRIRGGYE 127
GY + + ++G+EG + + V D S G + + GY
Sbjct: 124 VGYRWQSASWVFGLEGQGNWADFSGDNISLLFPGSALVTGDRNRSRIDSFGLITGQVGYA 183
Query: 128 VSDSLLLYATVGPD-VAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSESL 176
+S+LLY G V K++ A G T G G+E G + +
Sbjct: 184 W-NSVLLYVKGGAAVVGDKFDIYAAPGTPGAGTLLASGRDTRWGATVGAGLEF-GFAPNW 241
Query: 177 VARLEYRA 184
+EY
Sbjct: 242 SVGVEYDH 249
>gi|148255738|ref|YP_001240323.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407911|gb|ABQ36417.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 260
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 57/194 (29%), Gaps = 43/194 (22%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF-----------------GEEAHHNAGG--SIF 81
YV + G Y G + + S E H+ G
Sbjct: 32 APPPAYVTPLPSWAGFYLGANGGADWSRNCWTLNRVNGVPVVPTQSEGCHNATSGLIGGQ 91
Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDS 131
GY + + ++G+E +T ++ ++ G + GY +
Sbjct: 92 IGYRWQAASWVFGLEAQGNWTDLKSSNASSAAFAAGITNNTKTDAIGLFTGQIGYAWGN- 150
Query: 132 LLLYATVGPDVAQKYETGKA------------GEITPIAIGGTAGVGVEVGGLSESLVAR 179
+L Y G VA TG A + GGT G GVE G + +
Sbjct: 151 VLWYVKGGAAVAHNKYTGTANAAAPVAVGTLLDSASETRWGGTVGTGVEF-GFAPNWSVA 209
Query: 180 LEYRASKYSKVEGF 193
+EY +
Sbjct: 210 VEYDHLFMGSRDIT 223
>gi|316935831|ref|YP_004110813.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris DX-1]
gi|315603545|gb|ADU46080.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris DX-1]
Length = 263
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 86/277 (31%), Gaps = 86/277 (31%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ +A V +A +A AAD G ++ G Y G
Sbjct: 1 MRRVVVAATVGVMA----QTAYAADMPDYGPLRG--------ALVETARVVNWEGFYVGG 48
Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88
A Y S G+ + H G FAGYN +
Sbjct: 49 QAGYGTSDMNFTNSTSDIASNLLANTVIESQMGVSSWPVLGKTSSHGQGWGAFAGYNAQW 108
Query: 89 SCIMYGVEGD-----------------VRYTVPVLADNIHSLHGIG----GSLRIRGGYE 127
++ GVE + + Y + S I GS R+R GY
Sbjct: 109 DDVVLGVEANYMHGSFGGSAIGSMGRQITYNNVNYSATYTSSAAINVNDIGSARLRAGYA 168
Query: 128 VSDSLLLYATVGPDVAQKYETGKAG------------------EITPIAIGGTAGVGVEV 169
S L YA +G + Q A + G G+G++
Sbjct: 169 F-GSFLPYAFIGASLGQADIVRTATITGTQGGSTVMPLSATRVQNGHFIYGYAGGLGMD- 226
Query: 170 GGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205
L L R E+ K++ V+ +T+ G+G KF
Sbjct: 227 MMLYRGLFLRAEWEYLKFAAPVDTSVSTVRAGLGYKF 263
>gi|319406586|emb|CBI80228.1| Hemin binding protein E [Bartonella sp. 1-1C]
Length = 305
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 19/110 (17%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--------GKAGEITPIAIGGTAG 164
G+ R+R G+ +D ++ Y G A+ +T + +G T G
Sbjct: 198 KEKWTGATRVRIGFA-ADRIMPYIAAGVSYAELQDTLSVLVSRRNAEADEEKKMVGYTFG 256
Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
G ++ L++S + R EYR S + K N +GV KF
Sbjct: 257 GGFDI-ALAKSFIMRTEYRYSDFGKKKFAKGEVELSYKTNDFRVGVAYKF 305
>gi|170750581|ref|YP_001756841.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657103|gb|ACB26158.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 277
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 64/225 (28%), Gaps = 61/225 (27%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M KL ++ + +A AAD RRA + G Y G+
Sbjct: 1 MTKLLASLAAFTALTG---AASAADLPRRAAPPPVFTP---------VPVFTWTGAYFGI 48
Query: 61 SALYN------------------------GSFGEEAHHNAGGSIFAGYNVE---DSCIMY 93
+A Y SF + G GYN + S ++
Sbjct: 49 NAGYAFDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVI 108
Query: 94 GVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEVSDSLLLY 135
GVE D +Y N S G++R R GY D L+Y
Sbjct: 109 GVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAF-DRTLVY 167
Query: 136 ATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177
T G G G G G+E ++S +
Sbjct: 168 GTGGFAYGSGSADRSFGGYAGNDSFRTGWAVGGGIEYALPTDSFL 212
>gi|254564200|ref|YP_003071295.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|254271478|emb|CAX27493.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 299
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 74/302 (24%), Gaps = 114/302 (37%)
Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG--- 66
++ L A AAD G P A D++G Y G Y+
Sbjct: 6 LALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVGGHGGYSSAAL 59
Query: 67 SFGE-----------------------------EAHHNAGGSIFAGYNVEDSCIMYGVEG 97
FG A +FAG N + ++ G+E
Sbjct: 60 GFGNAFQPIVANALRNTVAEIEMGASHYLAARATHSGGASYGVFAGINYQFEDVVAGIEA 119
Query: 98 DVRY----------------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
D Y T L + G++R R GY + L +
Sbjct: 120 DYTYFGRSGTAFDQIARYSITKDNYLTTVDLTGQASTKIQDYGTIRGRLGYAFGN-FLPF 178
Query: 136 ATVGPDVAQKYETGK--------------------------------------------- 150
T G V +
Sbjct: 179 FTGGLAVGRATVNDTVTVQNYAYNSATYASNQTGTTRSYINNYGYSAFYQNSPPDSIPAP 238
Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFYNTISLGVGM 203
G G G+E ++ + + R EY+ + + + NT+ G +
Sbjct: 239 GTVYGTTKKVTVAGIAVGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAELNTVRGGAAI 297
Query: 204 KF 205
KF
Sbjct: 298 KF 299
>gi|312115597|ref|YP_004013193.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC
17100]
gi|311220726|gb|ADP72094.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC
17100]
Length = 254
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 70/217 (32%), Gaps = 40/217 (18%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M K +A + LA SA A D +G P + G + GL
Sbjct: 1 MNKTLIATASVAALLAMGGSALAGDL------YAKGGYKDAPVVVAEP---TWTGFHLGL 51
Query: 61 SAL------------YNGSFGEEAHHN-----AGGSIFA----GYNVEDSCIMYGVEGDV 99
Y+ GE +G +F GY+ + + G+ +
Sbjct: 52 GVGGAAVNHEIDAGLYDVRSGESKSIAGIDGISGTGVFGTVEVGYDRQYGNFVGGIFFNY 111
Query: 100 RYTVPVLADNIHSLHGIGG-------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152
+ + D H + ++ R GY V+ S L Y G + +
Sbjct: 112 DFGDDISTDVSLLGHDLASVKQTDSWTVGGRLGYLVNASTLAYVLGGYTESTFELSVPVA 171
Query: 153 --EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
G T G G+E L+ SL + EYR +++
Sbjct: 172 NFSTDDTFSGWTVGGGLET-KLTSSLSLKGEYRYTEF 207
>gi|13470603|ref|NP_102172.1| outer membrane protein-like [Mesorhizobium loti MAFF303099]
gi|14021345|dbj|BAB47958.1| outer membrane protein-like [Mesorhizobium loti MAFF303099]
Length = 430
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 40/200 (20%)
Query: 44 NRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIF---------------AGYNVED 88
+ +++ G Y G + G+ + + GG GY+ +
Sbjct: 232 ASFAAPTYNWTGFYVGGALG-AGTAVHDLGVDLGGGALDLNGIGSEGVLGEASIGYDYDF 290
Query: 89 SCIMYGVEGDVRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-- 141
+ GV+ D Y+ + +I + G R G +V++S L Y G
Sbjct: 291 GSWVAGVQLDASYSGIRSKLDIPGGSIKLDNDYGFDALARVGAKVNESTLAYVIGGYSYQ 350
Query: 142 -VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------- 191
I G T G G+E +S ++ LEYR S++ K +
Sbjct: 351 HFDLHASDPVGDIIDWNKSGFTVGGGLET-AVSSNMTVGLEYRYSQFGKKDFSSEFGAPD 409
Query: 192 ------GFYNTISLGVGMKF 205
+ T+ +G KF
Sbjct: 410 GTLTDKASFQTVRIGAKYKF 429
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 72/211 (34%), Gaps = 40/211 (18%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
FL VS++AL +AQAAD V+ G +++G Y G+ +
Sbjct: 10 FLLGAVSAVAL--MSAAQAADVVQPVEASG----------------FNWSGAYIGIGGGF 51
Query: 65 NGS-----------FGEEAHHNAGGSIFAGYNVE-DSCIMYGV-----EGDVRYTVPVLA 107
S F + G + AGY+ + G G++ ++ +
Sbjct: 52 GASVHKFSVAPIIDFNGIGGNGVFGELTAGYDYMVSDRFLLGGFIDANGGNIGPSISIPG 111
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI----TPIAIGGTA 163
+I + G + +R GY ++ L Y G G T G
Sbjct: 112 ADIDLTNSYGFDVGLRAGYLLNPDTLGYVLGGYSWQHFKLDGSGFAEGLNFTQNRSGYVL 171
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
GVG+E L + + EYR + Y
Sbjct: 172 GVGMET-VLRGNWTLKTEYRYAAYGDKSVID 201
>gi|163746512|ref|ZP_02153870.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380397|gb|EDQ04808.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45]
Length = 201
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 14/172 (8%)
Query: 29 RAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYN 85
V V + ++ G Y GL + G + AGY+
Sbjct: 28 ENTTVEAPVFTPAPMPTPVAVDGNWTGFYTGLQVGQTDIDSDSGTLDGDDTSYGFHAGYD 87
Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ + G E D T L + + +++ GY+ ++ L+YAT G A
Sbjct: 88 YDFGKFVLGGELDYDKTDIDLGTAGATADSV-ARAKVKAGYDFGNT-LVYATAGAARADT 145
Query: 146 YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197
G+ T AG+GV +++ E K+ V G + +
Sbjct: 146 SV----GDETGPF----AGLGVTY-KVTDRYTVGGEVLQHKFDDVGGTGDDL 188
>gi|220914733|ref|YP_002490041.1| porin [Methylobacterium nodulans ORS 2060]
gi|219952484|gb|ACL62874.1| porin [Methylobacterium nodulans ORS 2060]
Length = 287
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 49/173 (28%), Gaps = 49/173 (28%)
Query: 53 FNGPYAGLSALYNGSFGEEAH---------------------------HNAGGSIFAGYN 85
+ G YAG +A Y G G GYN
Sbjct: 43 WTGFYAGFNAGYGFDTGPNRGPTVIGVGPATGLVIVPTVIAFRNESNLDGFTGGGQIGYN 102
Query: 86 VED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIRGG 125
+ + ++ G+E D +Y N + G++R R G
Sbjct: 103 YQFTPGAGVVIGLEADAQYVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGRLG 162
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177
Y D L+Y T G G TAG GVE ++S +
Sbjct: 163 YAW-DRTLIYGTGGFAYGSGGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFL 214
>gi|323137911|ref|ZP_08072986.1| porin [Methylocystis sp. ATCC 49242]
gi|322396914|gb|EFX99440.1| porin [Methylocystis sp. ATCC 49242]
Length = 259
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 46/226 (20%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYA---- 58
V + ++ +A AAD R P + + G +
Sbjct: 2 TFKATVVGALASVLMIGAASAADLPSRKAPPEYIPPPPV---------FSWEGWHIGVVG 52
Query: 59 ------GLSALYNGSFGE-----EAHHNAGGSIF-----AGYNVE-DSCIMYGVEGDVRY 101
++ + FG + + G S + +GY + + + G E + Y
Sbjct: 53 GYGGGSSSTSSWIWDFGAVPAVWNVNTSRGTSGYLVGYESGYTWQFSNNFVLGYESEFSY 112
Query: 102 ------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--- 152
+ + G+ R+R GY +L Y T G + +G
Sbjct: 113 ADVRSNNTNSWFGGVSNRLEWFGAERLRFGYAF-GRILPYVTGGLAYGRVKASGTDSIGG 171
Query: 153 -----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
+ G T G G+E + + EY + G
Sbjct: 172 FLFPTNASTWQAGWTVGAGLEY-AFWDKFSIKAEYLYTSMKGPSGT 216
>gi|310816896|ref|YP_003964860.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308755631|gb|ADO43560.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 241
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 59/165 (35%), Gaps = 31/165 (18%)
Query: 53 FNGPYAGLSALYN-----------------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95
F G Y G S Y G GE +IF GY ++G
Sbjct: 48 FTGAYVGASLGYTFSEDDRVGVHTPAGTFLGDIGEFELAGPSAAIFGGYRWNSGKWVFGP 107
Query: 96 E---------GDVRYTVPVLADNIHSLH-GIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
E D+ Y P+ A + + +LR GYEV+ + L+Y +G +
Sbjct: 108 EVSVRFGDVSDDISYAGPIPAASTGTKELNWEAALRATLGYEVTPTTLVYGFLGYSAVEY 167
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
+ T G TAG+GVE L+++ R Y + Y
Sbjct: 168 DYVLNGAITLDETVSQNGLTAGLGVE-HALNDTWAVRGLYVYNDY 211
>gi|170741253|ref|YP_001769908.1| porin [Methylobacterium sp. 4-46]
gi|168195527|gb|ACA17474.1| porin [Methylobacterium sp. 4-46]
Length = 300
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 82/309 (26%), Gaps = 116/309 (37%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
++ + ++ L + A+AAD G P +++G Y G
Sbjct: 2 RIVTSTLLAGLCVCGLTPARAADLDFATLRGTSYDAPA--------PAGNWDGFYFGGHG 53
Query: 63 LYNGSF--------------------------------GEEAHHNAGGSIFAGYNVEDSC 90
+ + G + + G N +
Sbjct: 54 GWTSTSFGFGSVFQAPVANYLRQTKFESDLNASTLLHPGSMRRDSTTFGAYVGINFQLDE 113
Query: 91 IMYGVEGDV------RYTVPVLADNIHSLHGI----------------GGSLRIRGGYEV 128
+ G E D +T + I G +LR R GY+
Sbjct: 114 FVAGAELDYTHLSARGWTSDEIGRAIVGSDGWWRAVYLTGNASTRIDDYATLRARFGYD- 172
Query: 129 SDSLLLYATVGPDVAQKYETGKAG------------------------------------ 152
+ + + + T G + + + G
Sbjct: 173 AGNFMPFVTGGFAIGRAQISETIGVQPIEYDQATYKSNQSAARPAYVNYSGYSNFDQTNP 232
Query: 153 -------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NT 196
I G AG G+E ++ +++ R EY+ +++ +G NT
Sbjct: 233 GASTPSAPHLLVRSREKIVGGIAAGAGMEF-AMTANILLRAEYQFVQFNDFDGHKANINT 291
Query: 197 ISLGVGMKF 205
+ G +KF
Sbjct: 292 VRGGAALKF 300
>gi|294851522|ref|ZP_06792195.1| predicted protein [Brucella sp. NVSL 07-0026]
gi|294820111|gb|EFG37110.1| predicted protein [Brucella sp. NVSL 07-0026]
Length = 87
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 16/88 (18%)
Query: 133 LLYATVGPDVAQKYET----GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
+ Y G + G+ + G T G G++ +++++ RLEYR + Y
Sbjct: 1 MPYIAGGVAFGGIKNSLRIGGEESSKSKTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYG 59
Query: 189 KV-----------EGFYNTISLGVGMKF 205
K N I LGV KF
Sbjct: 60 KKNFGLNDLDTRGSFKTNDIRLGVAYKF 87
>gi|27379812|ref|NP_771341.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352965|dbj|BAC49966.1| blr4701 [Bradyrhizobium japonicum USDA 110]
Length = 250
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 35/179 (19%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLS--ALYNGSFGEEAH-------------HNAGGSIFA- 82
P V ++++G Y G + + + + HNA G++
Sbjct: 29 PYTKAPVAVASIYNWSGFYIGGNAGGGSSHNCWDLTAVGVAAIPVTAEGCHNATGALVGG 88
Query: 83 --GYNVEDSCIMYGVEGDVRYTVPVLAD----------NIHSLHGIGGSLRIRGGYEVSD 130
GY + S ++G+E + ++ ++ G + GY +
Sbjct: 89 QIGYRWQSSSWVFGLEAQGDWADLKGSNVSAPAALFPLVNNTKIDAIGLFTGQVGYAW-N 147
Query: 131 SLLLYATVGPDVAQKYETG-----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
++L Y G V +G GGT G G+E G + + +EY
Sbjct: 148 NVLWYVKGGAAVTHNKFSGTLAGITLDTANETRWGGTVGTGIEF-GFAPNWSVAVEYNH 205
>gi|148252448|ref|YP_001237033.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146404621|gb|ABQ33127.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 243
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 57/212 (26%), Gaps = 39/212 (18%)
Query: 31 HHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS---------FGEEAHHNAGGSIF 81
G R YV +++ G Y G S G ++ G +
Sbjct: 24 DLGARSYPYATKAPAYVAPIYNWTGFYLGAHLGGAFSSDNNFSGLATGNNSNGRFLGGVQ 83
Query: 82 AGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLL 134
G + + + G EG + + GS+ R GY LL
Sbjct: 84 VGADWQFAPTWVIGAEGQYSWLSGNVGAAFPGGFVYTNSQRGLGSITGRFGYTW-GPGLL 142
Query: 135 YATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
Y G + E G T G G+E + S A+ EY+ +
Sbjct: 143 YVKGGYAYSDNNEKVTLAGNQIGFATNGDHRNGWTVGAGIEY-MFAPSWSAKAEYQYYNF 201
Query: 188 SKV--------------EGFYNTISLGVGMKF 205
+T GV +F
Sbjct: 202 GSATFTAPAGLVPTGSFTTDDHTFKAGVNYRF 233
>gi|316936292|ref|YP_004111274.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1]
gi|315604006|gb|ADU46541.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1]
Length = 561
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 77/241 (31%), Gaps = 53/241 (21%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ + ++ A AAD G P + P++ ++ G Y G+
Sbjct: 1 MRRILVT---AAALATVISPAAAADMP--------GFPPLMPA---APVQWNWTGLYWGV 46
Query: 61 SALYNG-------------SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVR------ 100
+ G A I GYN + ++ + GVE D+
Sbjct: 47 HVGGSFGSSSFSDPAGPGLYGGNVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKG 106
Query: 101 ------YTVPVLADNIHSLHGIGGSLRIRGGYEVSD--SLLLYATVGPDVAQKYETGKAG 152
+ ++ N +L R G LLYA G + G
Sbjct: 107 TDTCMASSGLFISSNCRVRQDALATLTGRAGLVTGPGGRTLLYAKGGAAFLSERLDITTG 166
Query: 153 -------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE-GFYNTISL--GVG 202
+ G T G G+E L+ + +LEY + + + ++ L GVG
Sbjct: 167 NPLGNSTDTNDGRWGWTVGAGIE-RALAPAWSVKLEYGYADFGSRDMATPSSFRLVPGVG 225
Query: 203 M 203
Sbjct: 226 Y 226
>gi|220926460|ref|YP_002501762.1| porin [Methylobacterium nodulans ORS 2060]
gi|219951067|gb|ACL61459.1| porin [Methylobacterium nodulans ORS 2060]
Length = 246
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 77/230 (33%), Gaps = 48/230 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + + L +A AAD R VP + G YAG+
Sbjct: 2 MRSILRLGALGCACLGP--AALAADLPRH----------AAPPPLPVPPVFTWTGFYAGV 49
Query: 61 SALYNGSFGEEAHHNAGGSIFA--------------GYNVED---SCIMYGVEGDVRYTV 103
+A Y G ++ + + GYN + S + G E D++ T
Sbjct: 50 NAGYGFGSGSDSFTDPTYGTISTGGGRDGFVGGGQVGYNYQFTPGSGFVVGAEADIQGTT 109
Query: 104 PVLAD----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153
+ ++ G++R R GY V D +L+Y T G A
Sbjct: 110 FGRSRTGLVGSAPFYDVGPSLDWFGTVRGRIGYAV-DRILVYGTGGFAYGGGSLPSFAAS 168
Query: 154 ITP-----IAIGGTAGVGVEVGGLSESLVARLE--YRASKYSKVEGFYNT 196
T G AG GVE +++ L ARLE Y + Y+
Sbjct: 169 YTGPLPGTTRTGWAAGGGVEY-AITDRLSARLEGLYVNLDRGHRDTIYDA 217
>gi|319406881|emb|CBI80516.1| putative Hemin binding protein b [Bartonella sp. 1-1C]
Length = 379
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 25/116 (21%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------KYETGKAGEIT---------PI 157
G+ RIR G V ++ Y G A+ K + T I
Sbjct: 266 KRKWFGATRIRLGLSV-GRVMPYIAGGVAYAKVQGIFKKSIKIGISKETVPLSSFDSEEI 324
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYS-----KVEGFY---NTISLGVGMKF 205
G T G G + +++ ++ R EYR S + KV+ N +G+ KF
Sbjct: 325 MTGYTLGGGFDF-AVTDRILLRAEYRYSDFGAKEFKKVDLKDYNANDFRIGLAYKF 379
Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 23/91 (25%)
Query: 48 PIRHDFNGPYAGLSAL---------------------YNGSFGEEAHHNAGGSIFAGYNV 86
+ + G Y G + F E GG +AG N
Sbjct: 36 APFYSWGGFYFGGQIGSFSSSTTLQYNTLDETKKLNLSSRDFTSEFSGGTGGF-YAGVNF 94
Query: 87 EDSC-IMYGVEGDVRYTVPVLADNIHSLHGI 116
E + GV+ D+ ++ +
Sbjct: 95 EYGNRFVLGVDTDIVFSNKQNTKVFSGKDSV 125
>gi|220925103|ref|YP_002500405.1| porin [Methylobacterium nodulans ORS 2060]
gi|219949710|gb|ACL60102.1| porin [Methylobacterium nodulans ORS 2060]
Length = 287
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 65/225 (28%), Gaps = 59/225 (26%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + + + SA AAD RR + G YAG
Sbjct: 1 MKSLLKS-ATALAGVLVAGSALAADLPRRV---------APPPVFTPVPVFTWTGFYAGF 50
Query: 61 SALYNGSFGEEA---------------------------HHNAGGSIFAGYNVED---SC 90
+A Y S + + G GYN + S
Sbjct: 51 NAGYGFSTNDNNTPTVLGVGPATGLVFAPTVIAFQNRNNNDGFVGGGQVGYNYQFTPGSG 110
Query: 91 IMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIRGGYEVSDSLL 133
++ G+E D ++ N S G++R R GY D L
Sbjct: 111 VVIGLEADAQFADFGRNRNRFLATGPIAAQTVFNPAGISGLDWFGTVRGRLGYAF-DRTL 169
Query: 134 LYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177
+YAT G G TAG GVE ++S +
Sbjct: 170 VYATGGFAYGSGGGRDFGLPNRDDFQTGWTAGGGVEYALPTDSFL 214
>gi|170741476|ref|YP_001770131.1| porin [Methylobacterium sp. 4-46]
gi|168195750|gb|ACA17697.1| porin [Methylobacterium sp. 4-46]
Length = 296
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 65/232 (28%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L + + + SA AAD RRA + G YAG
Sbjct: 1 MKSLLKS-ATALAGVVIAGSAMAADLPRRAAPPPVFTP---------VPVFTWTGFYAGF 50
Query: 61 SALY-----------------------------NGSFGEEAHHNAGGSIFAGYNVED--- 88
+A Y G + + G GYN +
Sbjct: 51 NAGYGFGTSDNNNSTLIGVNAATGLVPPGTTAVLGFRNRDNNDGFVGGGQVGYNYQFTPG 110
Query: 89 SCIMYGVEGDVRYTV-----------------------PVLADNIHSLHGIGGSLRIRGG 125
+ ++ G+E D +Y V N S G++R R G
Sbjct: 111 AGVVIGIEADAQYADFGRERNRFSLVTNNPAVTGLAAQQVFNPNGLSGLDYFGTVRGRLG 170
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
Y +L+ + G T G GVE ++S +
Sbjct: 171 YAFDRTLVYATGGFAYGGGGGTSFGLPNRDDFQTGWTVGGGVEYALPTDSFL 222
>gi|170750637|ref|YP_001756897.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657159|gb|ACB26214.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 278
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 50/173 (28%), Gaps = 49/173 (28%)
Query: 53 FNGPYAGLSALYN------------------------GSFGEEAHHNAGGSIFAGYNVE- 87
+ G Y G++A Y SF + G GYN +
Sbjct: 42 WTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQI 101
Query: 88 --DSCIMYGVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYE 127
S ++ GVE D +Y N S G++R R GY
Sbjct: 102 TPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYA 161
Query: 128 VSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177
D L+Y T G G G G G+E ++S +
Sbjct: 162 F-DRTLVYGTGGFAYGSGSADRSFGGYAGNDSFRTGWAVGGGIEYALPTDSFL 213
>gi|146342779|ref|YP_001207827.1| putative outer membrane protein (OMPA-like), hemin-binding protein
[Bradyrhizobium sp. ORS278]
gi|146195585|emb|CAL79612.1| conserved hypothetical protein; putative outer membrane protein
(OMPA-like), hemin-binding protein [Bradyrhizobium sp.
ORS278]
Length = 266
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 82/270 (30%), Gaps = 90/270 (33%)
Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY------------- 64
AQAAD G T R +++G YAG+ Y
Sbjct: 5 VSVAQAADLSDLPILRGSM------TEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTST 58
Query: 65 --------------------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG------- 97
N + G+++ ++G F GYN + ++ GVE
Sbjct: 59 MTAAVLANTLIESQMQVSSWNMNLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKF 118
Query: 98 -----------------DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
D Y + ++R R GY + L YA G
Sbjct: 119 GGMTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRGRAGYAL-GCFLPYAFFGL 177
Query: 141 DVAQKYE---TGKAGEITPIAI---------------------GGTAGVGVEVGGLSESL 176
+ ++ + G +AG+GV+V L L
Sbjct: 178 ALGNADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVN-LVGGL 236
Query: 177 VARLEYRASKY-SKVEGFYNTISLGVGMKF 205
AR EY ++ S V+ NT+ G+G KF
Sbjct: 237 FARAEYEYIRFTSTVDTSVNTVRAGLGYKF 266
>gi|94497615|ref|ZP_01304184.1| membrane protein [Sphingomonas sp. SKA58]
gi|94423032|gb|EAT08064.1| membrane protein [Sphingomonas sp. SKA58]
Length = 279
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 63/226 (27%), Gaps = 68/226 (30%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-----------------GSFGEEAHHNAGGSIFA- 82
+ D+ GPY G S YN G + + G + F+
Sbjct: 19 VPAMAQDSGAVDWTGPYVGGSFGYNWQKSDGGEHLRFDTDADGDYNDVVTTTTGANAFSP 78
Query: 83 -----------------------------GYNVEDSCIMYGVEGDVR--YTVPVLAD--- 108
GY+++ + GV + Y + +
Sbjct: 79 GTCGGAARGPTPASGCNDDKDAIAWMGHVGYDMQFGSFVAGVVAEAGKAYVDDKVTEFST 138
Query: 109 -----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI---- 159
+ G+LR R GY ++ Y T G A+
Sbjct: 139 TPAFYTMRRKIDWNGNLRARLGYTTPSGIMPYITGGLAYAKVKNNFTTSNGANSFTENNR 198
Query: 160 -----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
G T G GVE +S++ Y ++Y V+ + + G
Sbjct: 199 SEDGWGWTMGGGVEA-KVSDNFSIGARYLWTRY-NVDDYRVDVGAG 242
>gi|83953797|ref|ZP_00962518.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83841742|gb|EAP80911.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 198
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 71/195 (36%), Gaps = 18/195 (9%)
Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSALYNGSFGE 70
+ A +A A V P + P + D+ G Y GL Y+ + +
Sbjct: 4 ASAAVLASTAFAG-ATYAGSLAEPVVEPVMTAPVPAPDLGGDWTGFYTGLQLGYSDAEVD 62
Query: 71 EAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL---RIRGG 125
G AGYN + + G E D T L D G S+ +I+GG
Sbjct: 63 NGLEGDNGSYGFHAGYNYDFGRFVLGGELDYDKTDIDLNDAAGVTQGSIDSVARAKIKGG 122
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR--LEYR 183
Y++ S L+YAT G A G+ GVG++ + V LE++
Sbjct: 123 YDL-GSTLIYATGGYARAD----TTMGDEDGAFY----GVGMDYKITEQYSVGAELLEHK 173
Query: 184 ASKYSKVEGFYNTIS 198
+ S V G ++
Sbjct: 174 FNDVSGVSGNDADVT 188
>gi|170747833|ref|YP_001754093.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654355|gb|ACB23410.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 276
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 51/171 (29%), Gaps = 47/171 (27%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAG----------------------GSIFAGYNVED-- 88
+ G Y G++A Y ++ G G GYN +
Sbjct: 42 WTGAYFGINAGYAFDASSNNTNSFGVPAPYGNGTTAFFSQRNQEGFTGGGQVGYNFQFTP 101
Query: 89 -SCIMYGVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEVS 129
S I+ GVE D +Y + N S G++R R GY
Sbjct: 102 GSGIVVGVEADAQYLDFGRSRNNAFLVGPLAPGYYVTDPRGLSSLDFFGTVRGRIGYAF- 160
Query: 130 DSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
D +L Y T G G G G G+E ++S +
Sbjct: 161 DRVLFYGTGGFAYGSGSADRSFGGFAGNDSFRTGYAVGGGIEYALPTDSFL 211
>gi|312113967|ref|YP_004011563.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311219096|gb|ADP70464.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 294
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 57/210 (27%), Gaps = 63/210 (30%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSAL---------------YNGSFGEEAHHNAGG----SI 80
+ P + G Y G + S + + GG I
Sbjct: 30 PASYKDIAPPPPLWTGFYVGAHLGGGWTDFDLGRNSYYYWPTSTTYDRYDYNGGLSGTGI 89
Query: 81 FAG----YNVEDSC---IMYGVEGDVRYTVPVLADNIH-------------------SLH 114
F G YN + +YG+E D+ + I+ +
Sbjct: 90 FGGLTIGYNWQFGQCCNYVYGIELDIGGWRDDASKTIYIDDDRRGLDPDASTRIRFTNKG 149
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPD----------------VAQKYETGKAGEITPIA 158
G G + R GY ++ L+YA G Y+ +
Sbjct: 150 GFYGDITGRIGYAAGNT-LIYAKGGFAWLNNSFRVGVLRENGATGYNYDWSSTTDNGNTL 208
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYS 188
G T G G+E + + + EY +
Sbjct: 209 AGWTVGGGLEY-KWNYNWSVKAEYLYFNFG 237
>gi|15420210|gb|AAK97315.1|AF321116_1 Pap31 [Bartonella henselae phage 60457]
Length = 221
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 77/214 (35%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------------HNAGGSIFAG 83
+A + G Y G S E G I+AG
Sbjct: 9 EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAG 68
Query: 84 YNVEDSC-IMYGVEGDVRYTV--------------------------------------- 103
N++ ++ GVE D +
Sbjct: 69 SNMDLGNNMILGVETDAVWADREDAKTFSAGAIGEDKLEKFKASLKNANADVAKDKKIDD 128
Query: 104 ----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAG- 152
D++ G+ R+R G+ +D ++ Y G V+ T A
Sbjct: 129 IVKEDKHTDSLALKEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADD 188
Query: 153 ---------EITPIAIGGTAGVGVEVGGLSESLV 177
+ T +G T G GV+ ++++++
Sbjct: 189 AEIASAQLFDKTKTLVGFTLGGGVDF-AMTDNVL 221
>gi|85715155|ref|ZP_01046139.1| putative outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698070|gb|EAQ35943.1| putative outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 236
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 61/202 (30%), Gaps = 37/202 (18%)
Query: 39 PTIATNRYVPIR---HDFNGPYAGLSALYNGSFGEEAHHN-AGGSIFAGYNVED-SCIMY 93
P Y P + +++ G Y G G G + G + + + +
Sbjct: 27 PYTKAPTYTPPQQAVYNWTGFYVGGHLGGAFGGGLGGSDGRFLGGVQGGADYQFANQWVL 86
Query: 94 GVEGD----VRYTVPVLADNIHSLHGIG---GSLRIRGGYEVSDSLLLYATVGPD---VA 143
GVE Y V + G GS+ R GY V LLYA G A
Sbjct: 87 GVEAQYSWLANYRGDVAFPGGSVVTGGNSGLGSVTGRLGY-VWGPTLLYAKGGYAFRDGA 145
Query: 144 QKYETGKAGEITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSKV-------- 190
A G T G G+E + + A+ EY+ + K
Sbjct: 146 LGVTNAAGVPQAFTATGNRDSGYTVGAGLEY-MFAPNWSAKAEYQYYNFGKTTFGAGSPA 204
Query: 191 -------EGFYNTISLGVGMKF 205
+T+ GV +F
Sbjct: 205 DVVGASFRNDEHTVKAGVNYRF 226
>gi|170738855|ref|YP_001767510.1| porin [Methylobacterium sp. 4-46]
gi|168193129|gb|ACA15076.1| porin [Methylobacterium sp. 4-46]
Length = 279
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 58/214 (27%), Gaps = 63/214 (29%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY--- 64
+ + LA+A A AAD RR VP + G G + Y
Sbjct: 6 LSSALLAIAVAGPACAADLPRRVQPPSFTPVP----------VFTWTGFSVGGNVGYAFT 55
Query: 65 -----------------------NGSFGEEAHHNAGGSIFAGYNVED---SCIMYGVEGD 98
F + G + G N + S ++ GVE D
Sbjct: 56 TRESRNRNAAFLIDDRAIGTVGGTFGFSNRGQNGFTGGLQVGANYQMTPGSGVVVGVEAD 115
Query: 99 VRY--------------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138
+Y + G+ R R GY D L+YAT
Sbjct: 116 AQYLDAGRRRSGVLAGPNTVLNPNAIFFDPRATAGLEYFGTARGRLGYAF-DRTLVYATG 174
Query: 139 GPDVAQKYETGKAG--EITPIAIGGTAGVGVEVG 170
G G + + G T G GVE
Sbjct: 175 GFAYGGGSARRFFGATDNAQMRTGWTVG-GVEYA 207
>gi|87118661|ref|ZP_01074560.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|87118664|ref|ZP_01074563.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|86166295|gb|EAQ67561.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|86166298|gb|EAQ67564.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
Length = 258
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 61/206 (29%)
Query: 52 DFNGPYAGLSAL-------------YNGSFGEEAH-----------------HNAGGSIF 81
++ G Y G++ Y+G F + ++ GS+
Sbjct: 29 NWEGLYTGIAIGISSSTASPSTEVEYSGYFNDNSNGSDRDQLDPILQREIEGDTTSGSLL 88
Query: 82 AGYNVEDSCIMYGVEGDV--------------RYTVPVLADN----IHSLHGIGGSLRIR 123
GY+ + +YG+E D+ Y A N SLR +
Sbjct: 89 LGYHFQKGKFVYGLEADLTFAEFSESESEGPTDYDTTAGASNFTTVTEIKTDYMFSLRPK 148
Query: 124 GGYEVSDSLLLYATVGPDVA-----------QKYETGKAGEITPIAIGGTAGVGVEVGGL 172
GY V D+ L++ + GP ++ + E ++G +A +G++ +
Sbjct: 149 VGY-VKDNFLMHISAGPVISEFTTTHSYTDTHGSGASLSFEDKDSSVGLSANIGIDYL-I 206
Query: 173 SESLVARLEYRASKYSKVEGFYNTIS 198
S L R +Y +S + ++
Sbjct: 207 SNGLSIRADYTYLHFSDILDGSGDVN 232
>gi|170738817|ref|YP_001767472.1| porin [Methylobacterium sp. 4-46]
gi|168193091|gb|ACA15038.1| porin [Methylobacterium sp. 4-46]
Length = 302
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 50/203 (24%), Gaps = 62/203 (30%)
Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYN---------------------------- 65
R V P + + G YAG +A Y
Sbjct: 24 PRRVAPPVIAPV---PVFTWTGFYAGFNAGYGFDASSTNPDVIVLTRDPRVVAGPAGSAL 80
Query: 66 --GSFGEEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIHS-------- 112
G G+ G GYN + + ++ G+E D +Y N S
Sbjct: 81 AIGWTGDRNTEGFSGGGQIGYNYQFTPGAGVVVGIEADAQYVDFGRNRNAFSFAIPNQPG 140
Query: 113 ------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154
G++R R GY L
Sbjct: 141 AQFNGANGLRLFDPRGLSGLDYFGTVRGRLGYAFDRVLFYGTGGFAYGGGGGTNFGLPNT 200
Query: 155 TPIAIGGTAGVGVEVGGLSESLV 177
G TAG G+E ++S +
Sbjct: 201 DDFQTGWTAGGGIEYALPTDSFL 223
>gi|27382516|ref|NP_774045.1| hypothetical protein bll7405 [Bradyrhizobium japonicum USDA 110]
gi|27355688|dbj|BAC52670.1| bll7405 [Bradyrhizobium japonicum USDA 110]
Length = 298
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/310 (18%), Positives = 90/310 (29%), Gaps = 117/310 (37%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L+L V S +A AAD G T+ H ++G Y G+
Sbjct: 1 MRRLWLVAAV----FGSVSAAHAADMPDLPVLRGGF------TDGLSKTSHRWDGAYVGV 50
Query: 61 SALYNGSFGEEAHH------------------------------NAGGSIFAGYNVEDSC 90
+ Y + + + F G N +
Sbjct: 51 NGGYTADATDFSQSVVGLTNFIFRDSVLQQPTANWSLMNKTNTQSTNFGAFVGRNWQWYD 110
Query: 91 IMYGVEGDVRY--TVPVLADNIHSLHGIGG-----------------------------S 119
+ G+EG Y + L +SL + +
Sbjct: 111 AILGLEGTYSYFNNLSTLTSGTNSLTIVNPPGDAHAANVTDNYDVTLTGTAAAKVKDMIT 170
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETG------------------------------ 149
LR R G++ D + YA +G V + +
Sbjct: 171 LRGRVGWDGGD-FMPYAFMGAAVGRMDVSRSVTSIVDLRQDVTNTIVVGGATLTTTTFGA 229
Query: 150 ----KAGEITPI-------AIGGTAGVGVEVGGLSESLVARLEYRASKYS---KVEGFYN 195
A + A+G TAG+GVE + + L AR+EY K+S N
Sbjct: 230 PQAVPAQSQSQTQRRTNAFAVGWTAGLGVEYC-IWDGLFARVEYEYVKFSPVMNTSVTLN 288
Query: 196 TISLGVGMKF 205
+G+G KF
Sbjct: 289 NARVGLGYKF 298
>gi|83951536|ref|ZP_00960268.1| possible outer membrane protein [Roseovarius nubinhibens ISM]
gi|83836542|gb|EAP75839.1| possible outer membrane protein [Roseovarius nubinhibens ISM]
Length = 221
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 13/148 (8%)
Query: 52 DFNGPYAGLSALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109
D+ G Y G Y S G + G I AGY+ + + G D + L
Sbjct: 72 DWTGFYGGAQLGYGDVSSNGALNGDDVIGGISAGYDYDLGSWVLGGGLDYDFADINLGGG 131
Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
+ + LR GY+V + L+Y T G A +T G G G G E
Sbjct: 132 TNLENVFRAKLRA--GYKVGNG-LIYGTGGYAQA---DTNTTGSED----GYFVGAGYE- 180
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTI 197
+S+++ E ++ V G +
Sbjct: 181 HMVSQNISVGGEALYHEFENVGGTTTDV 208
>gi|323138620|ref|ZP_08073687.1| porin [Methylocystis sp. ATCC 49242]
gi|322396108|gb|EFX98642.1| porin [Methylocystis sp. ATCC 49242]
Length = 305
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 48/161 (29%), Gaps = 41/161 (25%)
Query: 71 EAHHNAGGSIFAGYNVEDS-CIMYGVEGDV----RYTVPVLADNIHSLHGIG-------- 117
G GYN + + G+E D+ I + G
Sbjct: 96 TNTSGFIGGGQIGYNWQFGGSFLAGIEADIQGVAGSNSNSTVTTIATGAGFPANPTMTTM 155
Query: 118 ---------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA----------------- 151
G++R R G+ + +LL+Y T G
Sbjct: 156 TASRRLDYIGTVRGRLGWLFTPTLLVYGTGGLAYGGVTSNVSLVGAETPAAGPNNGVWFS 215
Query: 152 -GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
G + +G TAG GVE + + A++EY +V
Sbjct: 216 NGAFSDTRVGWTAGGGVEWMFM-PNWSAKVEYLYYDLGRVT 255
>gi|15420182|gb|AAK97313.1|AF308171_1 Pap31 [Bartonella quintana phage]
Length = 228
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 70/240 (29%), Gaps = 87/240 (36%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72
+AL S +AQAAD + A + G Y G G+F +
Sbjct: 2 IALISASAAQAADVIATHE----------AAPVITTPNFSWTGFYIGGQI---GNFTSDN 48
Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV--------- 103
G I+AG N++ ++ GVE D +
Sbjct: 49 KIKGLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWADCEATKTSAI 108
Query: 104 -----------------------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134
++D+ G+ R R G+ D ++
Sbjct: 109 RTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIGFSAFDRVMP 168
Query: 135 YATVGPDVAQ---------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
Y G A+ K G + T + +G T GV+V ++ +++ R
Sbjct: 169 YFAGGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMMVGFTVSGGVDV-AMTGNVLLR 227
>gi|220923245|ref|YP_002498547.1| porin [Methylobacterium nodulans ORS 2060]
gi|219947852|gb|ACL58244.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 52/173 (30%), Gaps = 49/173 (28%)
Query: 53 FNGPYAGLSALYNGSFGEEA---------------------------HHNAGGSIFAGYN 85
+ G YAG +A Y S + + G GYN
Sbjct: 41 WTGFYAGFNAGYGFSTNDNNTPTVLGVGPATGLVFAPTVIAFQNRNNNDGFVGGGQVGYN 100
Query: 86 VED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIRGG 125
+ S ++ G+E D ++ N S G++R R G
Sbjct: 101 YQFTPGSGVVIGLEADAQFADFGRNRNRFLATGPIAAQTVFNPAGISGLDWFGTVRGRLG 160
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177
Y D L+YAT G G TAG GVE ++S +
Sbjct: 161 YAF-DRTLVYATGGFAYGSGGGRDFGLPNRDDFQTGWTAGGGVEYALPTDSFL 212
>gi|170742457|ref|YP_001771112.1| porin [Methylobacterium sp. 4-46]
gi|168196731|gb|ACA18678.1| porin [Methylobacterium sp. 4-46]
Length = 294
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 48/180 (26%), Gaps = 55/180 (30%)
Query: 53 FNGPYAGLSALY-----------------------------NGSFGEEAHHNAGGSIFAG 83
+ G YAG +A Y G + + G G
Sbjct: 41 WTGFYAGFNAGYGFGTSDNNNSTLIGVNAATGLVPPGTTAVLGFRNRDNNDGFVGGGQVG 100
Query: 84 YNVED---SCIMYGVEGDVRYTV-----------------------PVLADNIHSLHGIG 117
YN + + + G+E D +Y V N S
Sbjct: 101 YNYQFTPGAGFVIGIEADAQYADFGRERNRFSLVTNNPAVTGLAAQQVFNPNGLSGLDYF 160
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
G++R R GY +L+ + G T G GVE ++S +
Sbjct: 161 GTVRGRLGYAFDRTLVYATGGFAYGGGGGTSFGLPNRDDFQTGWTVGGGVEYALPTDSFL 220
>gi|75675529|ref|YP_317950.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74420399|gb|ABA04598.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 241
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 61/202 (30%), Gaps = 36/202 (17%)
Query: 38 VPTIATNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHN-AGGSIFAGYNVED-SCIMY 93
T A Y P + +++ G Y G G + G + + + +
Sbjct: 27 PYTKAPVPYTPPQAVYNWTGFYIGGHLGGAFGGDLGGSDGRFLGGVQGGADYQFANNWVL 86
Query: 94 GVEGD----VRYTVPVLADNIHSLHGIG---GSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
G+E Y V + G GS+ R GY LLYA G
Sbjct: 87 GIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSVTGRLGYSW-GPTLLYAKGGYAFRDGA 145
Query: 147 --ETGKAGEITPI------AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-------- 190
T AG G T G G+E + + A+ EY+ + +
Sbjct: 146 LGVTDAAGAPQAFTTTGNRNSGYTVGAGLEY-MFAPNWSAKAEYQYFNFGRTTFGAGSPA 204
Query: 191 -------EGFYNTISLGVGMKF 205
+T+ GV +F
Sbjct: 205 DVVGASFRNDEHTVKAGVNYRF 226
>gi|89052836|ref|YP_508287.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1]
gi|88862385|gb|ABD53262.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1]
Length = 206
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 24/191 (12%)
Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH--------HNAGGSIFAGY 84
GG + HD+ G YAG + + +FAGY
Sbjct: 20 GGVVDPAPLDPVIISQPDHDWTGFYAGAQLDLVANAETTLEPFGQLMSFNGELAGLFAGY 79
Query: 85 NVEDSCIMYGVEGDV---RYTVPVLADNI---HSLHGIGGSLRI--RGGYEVSDSLLLYA 136
+ I+ G E D Y V +A NI + LR GY++ D L YA
Sbjct: 80 RYDFGDIVLGGEIDYMRGTYDVDEIAPNILLLSPEVDVE-LLRAGIEVGYDLGD-FLPYA 137
Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE-GFYN 195
T G + G GE + G AG+G + +SE++ E ++ + G +
Sbjct: 138 TAGYA-HLTLDYGGFGEDSG--DGWFAGIGADYR-VSENVTVGAELLHHQFEFNDFGLQH 193
Query: 196 TI-SLGVGMKF 205
+ ++G+ + F
Sbjct: 194 ELTTVGINVAF 204
>gi|192293155|ref|YP_001993760.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
gi|192286904|gb|ACF03285.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
Length = 263
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 77/259 (29%), Gaps = 82/259 (31%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----------- 67
+A AAD G P ++ G Y G Y S
Sbjct: 15 QTAYAADMPDYGPLRG--------ALVETPRVINWEGFYVGGQGGYGTSDMDFSNSTSGI 66
Query: 68 ---------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD-------- 98
G+ + H G FAGYN + ++ GVE +
Sbjct: 67 ASNLLVNTVIENQMSVSSWPVLGKASSHGQGWGAFAGYNAQWDDVVLGVEANYMHGSFGG 126
Query: 99 ---------VRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ Y S I GS R+R GY S L YA +G + Q
Sbjct: 127 GATGSMGRQIDYNNVNYRAIYTSSAAINVNDIGSARLRAGYAF-GSFLPYAFIGASLGQA 185
Query: 146 YETGKAG------------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
A + G G+G++V L L R E+ K+
Sbjct: 186 DIVRTATITGTQGGVPFTPLSATQVQNGHFIYGYAGGLGMDV-MLYRGLFLRAEWEYLKF 244
Query: 188 SK-VEGFYNTISLGVGMKF 205
+ ++ +T+ G+G KF
Sbjct: 245 AAPIDTSVSTVRAGLGYKF 263
>gi|146340935|ref|YP_001205983.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193741|emb|CAL77758.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 242
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 58/172 (33%), Gaps = 28/172 (16%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF---------GEEAHHNAGGSI--FAGYNVE 87
P + +D++G Y G++ Y S E H+ GG++ GY +
Sbjct: 29 PYTKAPPAIVAINDWSGFYLGINGGYGSSRNCWTLVNGPAEGCHNATGGTVGGQFGYRWQ 88
Query: 88 DSCIMYGVEGDVRYTVPVLA--------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
+++G+E + D + G + GY D+ LLYA G
Sbjct: 89 MGQVVFGLEAQGNWADLTGNNVTPVFAPDRNRTKLTAFGLFTGQIGYSFGDT-LLYAKGG 147
Query: 140 PDVAQKYETGKAGEITPIAI-------GGTAGVGVEVGGLSESLVARLEYRA 184
V +G I + G + G GVE + S EY
Sbjct: 148 AAVTDTRYEIFSGVINTVLAATTVHKWGASVGAGVEY-AFAPSWSVGFEYDH 198
>gi|118581633|ref|YP_902883.1| OmpA domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118504343|gb|ABL00826.1| OmpA domain protein transmembrane region-containing protein
[Pelobacter propionicus DSM 2379]
Length = 230
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 64/204 (31%), Gaps = 41/204 (20%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGE--------EAHHNAGGSIFAG-------- 83
+ + H++ G YAG++ Y + +A H+ G + G
Sbjct: 17 AVPSLAADNAPHNWTGFYAGINGGYGWGETQWDYVGSTGKADHHINGGLIGGTMGANLQF 76
Query: 84 --YNVEDSCIMYGVEGDVRYTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLL 134
Y ++ GVE D + S ++R R G D L +
Sbjct: 77 FAYQGGIPAVVGGVESDFDWADLGDDGPCPNPRFRAKSSIDALATVRGRLGLAF-DRLFI 135
Query: 135 YATVGPDVAQKYET-------------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
+ T G VA+ G GVG E + ++L ++E
Sbjct: 136 FGTGGLAVAKTDVETVDTWGTSVPPSGTAKNGEGKWKTGYVVGVGAEY-AVWKNLSFKVE 194
Query: 182 YRASKYSKVE-GFYNTISLGVGMK 204
Y+ + N I + G++
Sbjct: 195 YQYYDLGRSTYRVDNDIPVKAGVR 218
>gi|323139376|ref|ZP_08074427.1| porin [Methylocystis sp. ATCC 49242]
gi|322395369|gb|EFX97919.1| porin [Methylocystis sp. ATCC 49242]
Length = 293
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 59/224 (26%), Gaps = 70/224 (31%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH---------------------- 74
+P+ +P + G Y GL+A S
Sbjct: 19 DLPSSKGPATLPPPPLWTGFYLGLNAGGAWSDNNSVQTATFPIFDAIPAGYGTTSAILGT 78
Query: 75 --------NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIG-------- 117
G GY+ + + GVE D++ + +
Sbjct: 79 FSAPANASGFIGGGQIGYDYQFGGAFVAGVEADIQGVASSDGSSSVAGAAFNPVVLGGST 138
Query: 118 --------------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------------- 149
G+ R R GY V+ +LL++ + G
Sbjct: 139 ASQLATVGKSLDYLGTARGRLGYLVTPTLLVFGSSGLAYGGVSANTSIFQSYTPVAGATN 198
Query: 150 --KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+G + G TAG G+E + + A+ EY V
Sbjct: 199 IFASGSYSGARAGWTAGGGLEWMFV-PNWSAKAEYLYYDLGNVT 241
>gi|84499800|ref|ZP_00998088.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597]
gi|84392944|gb|EAQ05155.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597]
Length = 194
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 73/201 (36%), Gaps = 22/201 (10%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M ++ + S++ + + SA A +A P D++GPY G
Sbjct: 1 MSRIKTFIIGSAVVVTAGASAAYAGSPTQAQPEPVVAQPVTPVVAGT----DWSGPYYGA 56
Query: 61 SALY-NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119
S + + G + F GY+ + + G E ++Y + D + G
Sbjct: 57 SLGFGSWDLGGASGEGRNEGAFLGYDYDFGNYVAGGE--LQY---IGNDVTVGGTALNGM 111
Query: 120 LR--IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
R + GY+ + +LLY T G A G AGVG++ +
Sbjct: 112 ARLKGKLGYD-AGPVLLYGTAGYAWADSSAGDGD--------GYVAGVGMDYQ-FDNGVA 161
Query: 178 ARLEYRASKYSKVEGFYNTIS 198
EY +++S NT++
Sbjct: 162 VGAEYLYNEFSDFANTGNTLT 182
>gi|307294323|ref|ZP_07574167.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
gi|306880474|gb|EFN11691.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
Length = 217
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 80/232 (34%), Gaps = 42/232 (18%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ A ++ A+AS AQ +P + +D G AG
Sbjct: 1 MRKILAATLLTGAAVASPALAQEPNPTFTGPR------------VEAILGYDRTG--AGS 46
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS-------- 112
S + +++ + AGY+V + GVEG+ + + +
Sbjct: 47 SVDNDNDRDDQSIDGLLYGVGAGYDVNLGSAVIGVEGEYTDSTAKSSRTDFTDQFGFGRV 106
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIAI---GGTAGVGVE 168
G + R G S + L+Y G + G + T G G GVE
Sbjct: 107 KQGRDLYVGARAGILASPNTLVYVKGGYTNTKLDVLAGDTNQETDTNFKLDGWRIGGGVE 166
Query: 169 VGGLSESLVARLEYRASKYSK---------------VEGFYNTISLGVGMKF 205
++ + A+LEYR SKY ++ + + VG +F
Sbjct: 167 -RAINANSFAKLEYRYSKYEDAHIDFANGASSDEFGIDTDRHQVVASVGWRF 217
>gi|148255737|ref|YP_001240322.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407910|gb|ABQ36416.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 251
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 69/229 (30%), Gaps = 46/229 (20%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL-- 63
L +G ++ A AAD R + +D++G Y G +A
Sbjct: 4 LLLGATTSLALGIAPAIAADLPARTFTK---------APAMIATIYDWSGFYLGFNAGGG 54
Query: 64 -----------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106
N +A G GY + ++GVEG +
Sbjct: 55 SARTCWTNQVTIAGVAATNAEGCHDATGALAGG-QVGYRWQTGGWVFGVEGQGNWANLKG 113
Query: 107 ADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------KA 151
+ G+ G L + GY +++L Y G V + +G
Sbjct: 114 RNASQLAPGVTNQTKINGVGLLTGQIGYAW-NNVLWYVKGGAAVTGEKYSGLATATGTPF 172
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
+ + G G GVEV G + + EY ++ + G
Sbjct: 173 DQASATRWGAAVGTGVEV-GFANNWSIAAEYEHLFMGNRTLTFSGVPGG 220
>gi|319403669|emb|CBI77254.1| Hemin binding protein E [Bartonella rochalimae ATCC BAA-1498]
Length = 306
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 19/110 (17%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--------GKAGEITPIAIGGTAG 164
G+ R+R G+ +D ++ Y G + +T + +G T G
Sbjct: 199 KEKWAGATRVRIGFA-ADRIMPYIAAGVSYTELQDTLSVLVSRRNAEVDEEKKMVGYTFG 257
Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205
G ++ +++S + R EYR S + K N +GV KF
Sbjct: 258 GGFDI-AIAKSFIMRTEYRYSDFGKKKFAKGEVELSYKTNDFRVGVAYKF 306
>gi|323139111|ref|ZP_08074169.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC
49242]
gi|322395675|gb|EFX98218.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC
49242]
Length = 837
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 54/203 (26%), Gaps = 65/203 (32%)
Query: 52 DFNGPYAGLSALYNGSFGEEAHH-----------------------------NAGGSIFA 82
+ Y GL+ G++ A + G +
Sbjct: 592 SWTDVYVGLNGG--GAWSSPASNVQVVGVGPAPASLPVAFSAAPIDTGNHLAGFIGGLQL 649
Query: 83 GYNVE-DSCIMYGVEGDV----RYTVPVLADNIHSLHG--------------IGGSLRIR 123
G N + GVE D+ T + G G++R R
Sbjct: 650 GANWNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLNYLGTVRGR 709
Query: 124 GGYEVSDSLLLYATVGPDVAQKYETG-------KAGEITP-------IAIGGTAGVGVEV 169
GY + +L++Y T G T +G +AG GVE
Sbjct: 710 LGYLATPTLVVYGTGGMAYGGVVSNTAIFTRRIGGTSQTQVNPVFQDTLVGWSAGGGVEW 769
Query: 170 GGLSESLVARLEYRASKYSKVEG 192
L + A+++Y
Sbjct: 770 MFL-PNWSAKVDYLHYDLGNARA 791
>gi|84515617|ref|ZP_01002979.1| possible outer membrane protein [Loktanella vestfoldensis SKA53]
gi|84510900|gb|EAQ07355.1| possible outer membrane protein [Loktanella vestfoldensis SKA53]
Length = 205
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
+++ A F A V PT + D+ G YAG Y G
Sbjct: 10 TAMLAAPFAVAAGMSAAGGMAQPVETVAPTPVAPAPMMASTDWTGFYAGGQLGYADVTGS 69
Query: 71 EAHHNAGG---SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYE 127
+ G + GY + ++ G E D + L I ++ R GY+
Sbjct: 70 GTTADVDGAIYGVHGGYMYDLGSVVLGGEVDYDLSSIDNVAGTADLDDIM-RVKARVGYD 128
Query: 128 VSDSLLLYATVGPDVAQK 145
+ + L Y T G A
Sbjct: 129 -AGAFLPYVTGGVVRANT 145
>gi|294011267|ref|YP_003544727.1| putative outer membrane protein [Sphingobium japonicum UT26S]
gi|292674597|dbj|BAI96115.1| putative outer membrane protein [Sphingobium japonicum UT26S]
Length = 217
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 69/201 (34%), Gaps = 27/201 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M K+ A ++ A++S AQ +P + +D G AG
Sbjct: 1 MHKILAATLLTGAAVSSPALAQDVNPTFTGPR------------VEAILGYDHTG--AGS 46
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI--------HS 112
S + +++ + AGY+V + GVEG+ + +
Sbjct: 47 SVDNDNDRDDQSIDGLLYGVGAGYDVNLGSAVVGVEGEFTDSTAKSGRSDPTDQFGFGRV 106
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE---TGKAGEITPIAI-GGTAGVGVE 168
G + R G S + L+Y G + T + G G GVE
Sbjct: 107 KQGRDLYVGARAGILASPNTLVYVKGGYTNTKLDVLAGNTNVETDTNFKLDGWRIGAGVE 166
Query: 169 VGGLSESLVARLEYRASKYSK 189
++ + A+LEYR SKY
Sbjct: 167 -RAINANTFAKLEYRYSKYED 186
>gi|323139008|ref|ZP_08074068.1| porin [Methylocystis sp. ATCC 49242]
gi|322395762|gb|EFX98303.1| porin [Methylocystis sp. ATCC 49242]
Length = 300
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 71/262 (27%), Gaps = 84/262 (32%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ V V + L + SA AAD R + G Y GL
Sbjct: 1 MKTRHFCVVVMTAVLMT-ASAVAADLPSRKDDPLPAPP-----------PPMWTGFYVGL 48
Query: 61 SALYNGSFGEEAHH---------NAGGSIFAG-----------------------YNVE- 87
+A S A+ G + YN
Sbjct: 49 NAGGTWSNSNSANVASAPFWTLPGLNGDVLGASAISASAYNPANAGGFIGGGQIGYNWRI 108
Query: 88 DSCIMYGVEGDVRYTVPVLADNIHSLH----------------------GIGGSLRIRGG 125
+ G+E D++ + G++R R G
Sbjct: 109 AGSFVTGIEADIQGIAGNGGAGSSANVAAIAGALVPSHVATVVGTSKSLDYLGTVRSRIG 168
Query: 126 YEVSDSLLLYATVGPDVAQKYET----------------GKAGEITPIAIGGTAGVGVEV 169
Y + +LL+Y T G + G G + +G TAG G+E
Sbjct: 169 YLATPTLLIYGTGGLAYGGVSSSATISQSASFIDTAVPWGSTGAFSDTRVGWTAGGGIEW 228
Query: 170 GGLSESLVARLEYRASKYSKVE 191
+S + A++EY V
Sbjct: 229 MFMS-NWSAKVEYLYYDLGSVT 249
>gi|170749780|ref|YP_001756040.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656302|gb|ACB25357.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 299
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 68 FGEEAHHNAGGSIFAGYNVE---DSCIMYGVEGDVRY-----------------TVPVLA 107
+ ++ G GYN + S + G E D +Y +
Sbjct: 94 YSNDSREGFSGGGQIGYNWQLTPGSGAVIGFEADAQYLDFGRRARFATNAAAINPGFIPV 153
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAIG 160
+ + G++R R GY D L+YAT G A+ AG G
Sbjct: 154 NGTLNTIDFFGTVRGRLGYAF-DRTLVYATGGFAYATGTDDGARVGLQNFAGRRNDFKTG 212
Query: 161 GTAGVGVEVGGLSESLV 177
T G GVE ++S +
Sbjct: 213 WTVGGGVEYALPTDSFL 229
>gi|39937872|ref|NP_950148.1| hypothetical protein RPA4814 [Rhodopseudomonas palustris CGA009]
gi|39651732|emb|CAE30254.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 561
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 71/221 (32%), Gaps = 48/221 (21%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65
+ V V++LA A AAD R P + P+ ++ G Y G +
Sbjct: 4 ILVTVATLATV-ISPAAAADMPR---------FPPLMPV--APVSWNWTGLYWGAHVGGS 51
Query: 66 G-------------SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRY---------- 101
G A I GYN + ++ + GVE D+
Sbjct: 52 FGSSSFSDPAGPGLYGGSVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKGTNTCM 111
Query: 102 --TVPVLADNIHSLHGIGGSLRIRGGYEVSD--SLLLYATVGPD-------VAQKYETGK 150
+ ++ N +L R G+ LLYA G +A Y G
Sbjct: 112 ASSGLFISSNCRVRQDALATLTGRAGFVTGPGGRTLLYAKGGAAYLSERLDIAVGYPLGN 171
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
G T G G+E L+ + +LEY + + +
Sbjct: 172 LTAANDGRWGWTVGAGIE-RALAPAWSVKLEYNYADFGSRD 211
>gi|218532905|ref|YP_002423721.1| porin [Methylobacterium chloromethanicum CM4]
gi|218525208|gb|ACK85793.1| porin [Methylobacterium chloromethanicum CM4]
Length = 274
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 73/250 (29%), Gaps = 74/250 (29%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + G++ + L+ +A AAD RRA +P + G Y G
Sbjct: 1 MRNSLILSGLAGILLSG--TALAADLPRRAEAPVFTPIP----------VFAWTGAYFGT 48
Query: 61 SALYNGSFGEEA------------------------HHNAGGSIFAGYNVE---DSCIMY 93
+ Y + + AGYN + + ++
Sbjct: 49 NGGYAYTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGAGFVF 108
Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
G E D +Y VL + + G++R R GY D +L+Y T
Sbjct: 109 GFETDAQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAF-DRVLVYGT 167
Query: 138 VGPDVAQKYE---------TGKAGEITPIAIGGTAGVGVEVGGLSES---------LVAR 179
G AG + + G G G+E + S + +
Sbjct: 168 GGFAYGTTTLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVK 227
Query: 180 LEYRASKYSK 189
EY
Sbjct: 228 AEYLRYDLGS 237
>gi|91978859|ref|YP_571518.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5]
gi|91685315|gb|ABE41617.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5]
Length = 559
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 42/192 (21%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG---------------SIF 81
+P + P+ ++ G Y G GSFG + + G I
Sbjct: 22 DLPRLPPA--APVLWNWTGLYWGAHLG--GSFGASSFSDPAGPGIYGGNVRSPAAMAGIQ 77
Query: 82 AGYNVE-DSCIMYGVEGDVR------------YTVPVLADNIHSLHGIGGSLRIRGGYEV 128
GYN + ++ + GVE D+ + V++ N ++ R G
Sbjct: 78 LGYNYQPNANWLVGVEADLSALNGNGTNSCMVSSGLVISANCRVRQDAMATVTGRAGLVT 137
Query: 129 SD--SLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEVGGLSESLVAR 179
LLYA G + G + + G TAG G+E L+ + +
Sbjct: 138 GPGGRTLLYAKGGAAFLSERIDITVGNPLRSSTDNSDGRWGWTAGAGIE-QALAPAWSVK 196
Query: 180 LEYRASKYSKVE 191
EY + + +
Sbjct: 197 FEYDYANFGSSD 208
>gi|254560231|ref|YP_003067326.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|254267509|emb|CAX23351.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 289
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 69/228 (30%), Gaps = 63/228 (27%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + G++ + L+ +A AAD RRA + G YAG
Sbjct: 1 MRNSLILAGLTGILLSG--TALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGF 49
Query: 61 SALYNGSFGEE-----------------------------AHHNAGGSIFAGYNVED--- 88
+A Y ++ ++ G GYN +
Sbjct: 50 NAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPG 109
Query: 89 SCIMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131
S ++ GVE D +Y V S G++R R GY D
Sbjct: 110 SGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DR 168
Query: 132 LLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
L+Y T G G G AG G+E ++S +
Sbjct: 169 TLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 216
>gi|115524922|ref|YP_781833.1| hypothetical protein RPE_2916 [Rhodopseudomonas palustris BisA53]
gi|115518869|gb|ABJ06853.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 578
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 65/247 (26%), Gaps = 77/247 (31%)
Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALY---------------------------- 64
G V A+ + P+ + G Y G
Sbjct: 324 GDVTPVAAAASVKAPPVAVHWTGAYVGGHLGAGFGPKHWSDPLGSSMALVDPGPPDYAVG 383
Query: 65 -------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
G G + GYNV+ + G E + + I+S G G
Sbjct: 384 TPRGLNMAGFGKSTPMAGGLGGLQIGYNVQIDNTVLGFEVEAALADLKGSHTIYSGIGGG 443
Query: 118 ---------GSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGK------------AGEI 154
G+ R GY + D L+Y G V +
Sbjct: 444 QAEAHTKALGTFAGRLGYAL-DRSLIYVKAGGAWAVTDHTLNTSSVYGNVQGLDCCGDTV 502
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-----------------VEGFYNTI 197
+ G G G+E ++ + A EY + ++ ++T+
Sbjct: 503 SSSRFGWVVGAGIEY-AVNRTWSATFEYDYMDFGTQSIRFPTNAGLGLPPAAIDQAFHTV 561
Query: 198 SLGVGMK 204
+GV K
Sbjct: 562 KMGVNYK 568
>gi|163850612|ref|YP_001638655.1| porin [Methylobacterium extorquens PA1]
gi|218529335|ref|YP_002420151.1| porin [Methylobacterium chloromethanicum CM4]
gi|240137660|ref|YP_002962131.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|163662217|gb|ABY29584.1| porin [Methylobacterium extorquens PA1]
gi|218521638|gb|ACK82223.1| porin [Methylobacterium chloromethanicum CM4]
gi|240007628|gb|ACS38854.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
Length = 289
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 69/228 (30%), Gaps = 63/228 (27%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + G++ + L+ +A AAD RRA + G YAG
Sbjct: 1 MRNSLILAGLTGILLSG--TALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGF 49
Query: 61 SALYNGSFGEE-----------------------------AHHNAGGSIFAGYNVED--- 88
+A Y ++ ++ G GYN +
Sbjct: 50 NAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPG 109
Query: 89 SCIMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131
S ++ GVE D +Y V S G++R R GY D
Sbjct: 110 SGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DR 168
Query: 132 LLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
L+Y T G G G AG G+E ++S +
Sbjct: 169 TLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 216
>gi|163854231|ref|YP_001642274.1| porin [Methylobacterium extorquens PA1]
gi|163665836|gb|ABY33203.1| porin [Methylobacterium extorquens PA1]
Length = 313
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/321 (14%), Positives = 85/321 (26%), Gaps = 124/321 (38%)
Query: 1 MQKLFLAVG-VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59
M+ + + ++ L A AAD G P A D++G Y G
Sbjct: 1 MRTTTMRIATLALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVG 54
Query: 60 LSALYNG--------------------------------SFGEEAHHNAGGSIFAGYNVE 87
Y+ SF + H FA YN++
Sbjct: 55 GHGGYSSASMGFTNVFSKPYSQYFRARDIETEFGISSLLSFASQRVHGITYGAFASYNIQ 114
Query: 88 DSCIMYGVEGDV------RYTVPVLADNIHSLHGI----------------GGSLRIRGG 125
++G+E D + ++ + + + + G++R R G
Sbjct: 115 LDDAVFGIEVDYTSFSKSGMSYSEISRFVTTKNNMFETVNLRGFSRTELEDFGTIRGRAG 174
Query: 126 YEVSDSLLLYATVGPDVAQ--------------------KYETGKAGEITPIAIGGTAG- 164
Y S L + T G + + Y+T G G
Sbjct: 175 YAF-GSFLPFVTAGLAIGRATILDQPEVQNYGYDATAAAAYQTNPKAGAPVTHHGYANGN 233
Query: 165 -------------------------------------VGVEVGGLSESLVARLEYRASKY 187
G+E ++ + + R EY+ +
Sbjct: 234 TAFDPSAPQDPQKSIPDGFYQIPAKPKSKAMAGVALGAGLEY-AITPNFLLRGEYQYVLF 292
Query: 188 SKVEGFY---NTISLGVGMKF 205
+G NT+ G +KF
Sbjct: 293 DDFDGHKINVNTVRGGAAIKF 313
>gi|260460927|ref|ZP_05809177.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259033504|gb|EEW34765.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 255
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 41/188 (21%)
Query: 49 IRHDFNGPYAGLSALY-------------NGSFG-----------EEAHHNAGGSIFAGY 84
+D++G Y G NG F + G I AG
Sbjct: 36 SAYDWSGFYVGGHIGVADGDITATDMTEPNGGFFTELVPAGTEGFDFNKAGVAGGIHAGA 95
Query: 85 NVEDSCIMYGVEGDVRYTVPVL---------ADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
+ + G E T +D ++ R GY D +L+Y
Sbjct: 96 QWQWGQFVLGGEATWTATGIRKTITSPYYPDSDTETGKISNYATIVGRVGYAF-DRVLIY 154
Query: 136 ATVGPDVA----QKYETGKAGE--ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
A G + + G G G++ L+ +L ++Y
Sbjct: 155 AKAGYAGGKVDFRARDNDALVSYEKNEWQNGYALGAGIDY-ALTNNLSLGVDYTHIDLGH 213
Query: 190 VEGFYNTI 197
+ +
Sbjct: 214 KTSTGDNV 221
>gi|188582250|ref|YP_001925695.1| porin [Methylobacterium populi BJ001]
gi|179345748|gb|ACB81160.1| porin [Methylobacterium populi BJ001]
Length = 290
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 66/224 (29%), Gaps = 61/224 (27%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
FL G + +A SA AAD RRA + G YAG +A Y
Sbjct: 4 FLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGFNAGY 54
Query: 65 NGSFGEE-----------------------------AHHNAGGSIFAGYNVED---SCIM 92
++ ++ G GYN + S ++
Sbjct: 55 GFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVV 114
Query: 93 YGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
G+E D +Y V S G++R R GY D L+Y
Sbjct: 115 IGIEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DRTLVY 173
Query: 136 ATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
T G G G AG G+E ++S +
Sbjct: 174 GTGGFAYGSGGGREFGTGVSSDDFQTGWAAGGGIEYALPTDSFL 217
>gi|148257935|ref|YP_001242520.1| hypothetical protein BBta_6718 [Bradyrhizobium sp. BTAi1]
gi|146410108|gb|ABQ38614.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 550
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 13/131 (9%)
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG------SLRIRGGYE 127
+ G + G + + + G++ + + + + + +R GY
Sbjct: 381 GDVIGGVQLGCDYQIDRFVLGIQAMADLGIINASTAVAPQLTLNARTSNLYTATVRAGYL 440
Query: 128 VSDSLLLYATVGPDVAQKYET----GKAGEITPIAI--GGTAGVGVEVGGLSESLVARLE 181
V+ +LLYA G + T + G T G GVE + + A E
Sbjct: 441 VTPEVLLYARGGAAWTRTSVTAVNAANGQSASAAFNRSGWTVGAGVE-WMFARNWSAFAE 499
Query: 182 YRASKYSKVEG 192
Y + + V G
Sbjct: 500 YDYADFGTVTG 510
>gi|156739544|gb|ABU93432.1| Omp25 [Brucella abortus]
Length = 49
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
+ ++ Y T G +Q + + +G TAG G+E L+++++
Sbjct: 3 NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 49
>gi|148254831|ref|YP_001239416.1| hypothetical protein BBta_3415 [Bradyrhizobium sp. BTAi1]
gi|146407004|gb|ABQ35510.1| putative outer membrane protein of unknown function [Bradyrhizobium
sp. BTAi1]
Length = 680
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 74/239 (30%), Gaps = 69/239 (28%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+++ L V SLALA AA + GP+ G
Sbjct: 4 MKRIGLTSAVLSLALAIPGPTDAA-----------------PIRSAEADIQAWTGPFLGG 46
Query: 61 SALYNGSFGEEAHHNAGG-----------------------SIFAGYNVEDSC-IMYGVE 96
Y G + NA + AGYN ++ GVE
Sbjct: 47 HFGYVGGASSWSASNAVTTVSGSTGVFNSYDVFKGTGSYLFGLQAGYNWTLPSRLVLGVE 106
Query: 97 GDVRYTVPVLADNIHSLHGIG-----------GSLRIRGGYEVSDSLLLYATVG------ 139
DV V + + G G+ R R GY D LLYAT G
Sbjct: 107 ADVSTPNTVAGERTVTSASAGTASYRETVLAMGTARARLGYAF-DHWLLYATGGFAWSYD 165
Query: 140 ------PDVAQKYETGKAGEITPIA---IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ AG + +G AG+G E+ ++ A+ E+ AS++
Sbjct: 166 RLERTQLAGLPLVGSAVAGTVDTALTWRLGWVAGLGAELP-IAPHWTAKAEFLASEFGS 223
>gi|170748188|ref|YP_001754448.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
gi|170654710|gb|ACB23765.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
Length = 571
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 67/224 (29%), Gaps = 65/224 (29%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-------------- 64
+A AAD RR +P AT + G +AGL A Y
Sbjct: 16 QTAMAADLPRR-------ALPPAATAV---PIFSWTGAHAGLFAGYGTLDRATQFVCTGP 65
Query: 65 NGSFG----------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSL 113
+G G + + G GY+ + + + G D ++T D
Sbjct: 66 DGQPGARNCPVIPSKRASDGSFVGGAEVGYDWQVNSGFVAGAAADYQFTRLWGYDRREGA 125
Query: 114 HGIGG-------------------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-- 152
G +LR R G+ V D L+YAT G
Sbjct: 126 FPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAV-DRTLVYATGGLAAGTVRTDNNLSLA 184
Query: 153 -------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ +G AG G+E SE L A++E
Sbjct: 185 GFPLFDRRQGAVRLGYVAGAGIE-HAFSEHLSAKVEGLYYDLGS 227
>gi|114798934|ref|YP_759743.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444]
gi|114739108|gb|ABI77233.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444]
Length = 292
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 67/237 (28%), Gaps = 54/237 (22%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL--- 60
L A + + F + A P + RG+V + + G +G
Sbjct: 23 LSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGSVAPDFDYDANLNEGGPSGGVAE 82
Query: 61 ----SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN------- 109
+A++ FG G + AGYN + G E D D+
Sbjct: 83 GSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALGFEADFTGLGSNGGDDGAVQGLT 142
Query: 110 ----------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY------- 146
+ S + R+R G V+D L+Y T G V
Sbjct: 143 ASNPAFGDAVFGTDLRVRSSMDYLATTRLRAGV-VTDRFLVYGTGGAAVGNPEHQVDFSA 201
Query: 147 ---------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
+G G TAG G E ++++ + EY
Sbjct: 202 GLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEF-AFTDNMTLKAEYLYYDLG 257
>gi|163853964|ref|YP_001642007.1| porin [Methylobacterium extorquens PA1]
gi|240141418|ref|YP_002965898.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|163665569|gb|ABY32936.1| porin [Methylobacterium extorquens PA1]
gi|240011395|gb|ACS42621.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
Length = 274
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 81/265 (30%), Gaps = 75/265 (28%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + G++ + L+ +A AAD RRA +P + G Y G
Sbjct: 1 MRNSLILSGLAGILLSG--TALAADLPRRAEAPVFTPIP----------VFAWTGAYFGP 48
Query: 61 SALYNGSFGEEA------------------------HHNAGGSIFAGYNVE---DSCIMY 93
+ Y + + AGYN + + ++
Sbjct: 49 NGGYAYTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVF 108
Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
G E D +Y VL + + G++R R GY D +L+Y T
Sbjct: 109 GFETDAQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAF-DRVLVYGT 167
Query: 138 VGPDVAQKYETGK---------AGEITPIAIGGTAGVGVEVGGLSES---------LVAR 179
G AG + + G G G+E + S + +
Sbjct: 168 GGFAYGTTTLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVK 227
Query: 180 LEY-RASKYSKVEGFYNTISLGVGM 203
EY R S+ +T GVG
Sbjct: 228 AEYLRYDLGSRTVLIRSTGGPGVGY 252
>gi|319403868|emb|CBI77454.1| putative Hemin binding protein b [Bartonella rochalimae ATCC
BAA-1498]
Length = 356
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 27/118 (22%)
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPD------VAQKYETGKAGEIT----------- 155
G+ R+R G + ++ Y G ++ K A + T
Sbjct: 241 KRKWLGATRMRLGLS-AGRVMPYIAGGIAYAKVQFISSKTVNIGASKNTVPMSSLDSAEV 299
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----KVEGFY---NTISLGVGMKF 205
+ +G T G G + +++ ++ R EYR S + KV+ Y N +G+ KF
Sbjct: 300 EVMVGYTLGGGFDF-AMTDRILLRAEYRYSDFGAEKFKKVDLKYYKVNDFRIGLAYKF 356
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 21/95 (22%)
Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAG-------------------GSIFAGYNVE 87
+ ++G Y G S H+N G +AG N E
Sbjct: 20 ASPFYSWDGFYLGGQVGSFSSSMSLLHNNTDKTDERNFKDVFSSEVSGITGGFYAGVNFE 79
Query: 88 -DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
+ + GV+ D+ ++ A+ + +R
Sbjct: 80 YSNRFVLGVDTDIVFS-NKKAEKVFVDEKFENLVR 113
>gi|159044248|ref|YP_001533042.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12]
gi|157912008|gb|ABV93441.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12]
Length = 198
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 67/191 (35%), Gaps = 19/191 (9%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
F V +L LA F + A + + P D+ G Y G Y
Sbjct: 6 FSPVVALALPLALFGAPSLAGSLEDPVVEPVPMAPAPVVV----SGRDWTGGYVGAQIGY 61
Query: 65 NGSFGEEA---HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
+ G + AGY+ + + G + Y + + SL + L+
Sbjct: 62 GDVGTNASGVDGDGLIGGLIAGYDYDFGSYVLG--AGIDYDIADIDLGPASLEDVL-RLK 118
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
+R G+E + L+YAT G A G G AG GVE LS++L E
Sbjct: 119 LRAGFE-AGPSLIYATGGYARAGT---DNLGSDD----GWFAGAGVEYP-LSQNLSLAGE 169
Query: 182 YRASKYSKVEG 192
++ +G
Sbjct: 170 VLYHEFDDFDG 180
>gi|163852300|ref|YP_001640343.1| porin [Methylobacterium extorquens PA1]
gi|218531058|ref|YP_002421874.1| porin [Methylobacterium chloromethanicum CM4]
gi|240139636|ref|YP_002964112.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254562046|ref|YP_003069141.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|163663905|gb|ABY31272.1| porin [Methylobacterium extorquens PA1]
gi|218523361|gb|ACK83946.1| porin [Methylobacterium chloromethanicum CM4]
gi|240009609|gb|ACS40835.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254269324|emb|CAX25290.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 290
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/224 (20%), Positives = 66/224 (29%), Gaps = 61/224 (27%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
FL G + +A SA AAD RRA + G YAG +A Y
Sbjct: 4 FLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGFNAGY 54
Query: 65 NGSFGEE-----------------------------AHHNAGGSIFAGYNVED---SCIM 92
++ ++ G GYN + S ++
Sbjct: 55 GFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVV 114
Query: 93 YGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
GVE D +Y V S G++R R GY D L+Y
Sbjct: 115 IGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DRTLVY 173
Query: 136 ATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
T G G G AG G+E ++S +
Sbjct: 174 GTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 217
>gi|254563933|ref|YP_003071028.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|254271211|emb|CAX27223.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 274
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 81/265 (30%), Gaps = 75/265 (28%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + G++ + L+ +A AAD RRA +P + G Y G
Sbjct: 1 MRNSLILSGLAGILLSG--TALAADLPRRAEALVFTPIP----------VFAWTGAYFGP 48
Query: 61 SALYNGSFGEEA------------------------HHNAGGSIFAGYNVE---DSCIMY 93
+ Y + + AGYN + + ++
Sbjct: 49 NGGYAYTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVF 108
Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
G E D +Y VL + + G++R R GY D +L+Y T
Sbjct: 109 GFETDAQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAF-DRVLVYGT 167
Query: 138 VGPDVAQKYETGK---------AGEITPIAIGGTAGVGVEVGGLSES---------LVAR 179
G AG + + G G G+E + S + +
Sbjct: 168 GGFAYGTTTLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVK 227
Query: 180 LEY-RASKYSKVEGFYNTISLGVGM 203
EY R S+ +T GVG
Sbjct: 228 AEYLRYDLGSRTVLIRSTGGPGVGY 252
>gi|89070001|ref|ZP_01157333.1| possible outer membrane protein [Oceanicola granulosus HTCC2516]
gi|89044449|gb|EAR50580.1| possible outer membrane protein [Oceanicola granulosus HTCC2516]
Length = 200
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 11/162 (6%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG---YNVEDSCIMYGV 95
P A D++G Y G+ Y + G+ G+++ G Y + I+ G
Sbjct: 34 PAPAPAPVTMATRDWSGAYGGVQLGYGQTDGDVFAEEEEGALYGGFVGYQRDFGSIVAGA 93
Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
E D T + D + ++R GY+ + + L YAT G +A +A
Sbjct: 94 ELDYLGT-DITNDATGTDIDSLARAKLRVGYD-AGNFLPYATGGYAMANTSGGLEADAD- 150
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197
G GVG + +++ + E +++ +G +
Sbjct: 151 ----GYFYGVGADY-MVTDRIAVGGEITKNEFEDFDGSGDDF 187
>gi|188584563|ref|YP_001928008.1| outer membrane insertion C-terminal signal [Methylobacterium populi
BJ001]
gi|179348061|gb|ACB83473.1| outer membrane insertion C-terminal signal [Methylobacterium populi
BJ001]
Length = 299
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 76/311 (24%), Gaps = 118/311 (37%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ LA+ S LA AAD G A D++G Y G
Sbjct: 1 MRFATLALLTSVLA----TPVLAADLDYGVLRGSDDDYLPPA------PVVDWSGFYVGG 50
Query: 61 SALYNG---SFGEE-----------------------------AHHNAGGSIFAGYNVED 88
Y+ FG ++AG N +
Sbjct: 51 HGGYSSAALGFGNAFQSIVANALRYTAAEEEMKASQFLAARGIHASGTSYGVYAGVNYQF 110
Query: 89 SCIMYGVEGDVRY----------------------TVPVLADNIHSLHGIGGSLRIRGGY 126
++ G+E D Y LA + G++R R GY
Sbjct: 111 DDVVVGLEADYTYFGKTGAAFDQITRVMTTANGYRNTVALAGEASTEIEDYGTIRGRIGY 170
Query: 127 EVSDSLLLYATVGPDVAQKYETGKAG---------------------------------- 152
+ L + T G V +
Sbjct: 171 GFGN-FLPFVTGGLAVGRAVVNDTVAIQNYAYDEAAYKANQTGGPTTYVNHFGYQIFDQK 229
Query: 153 ---------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFY 194
G G G+E ++ + + R EY+ + + +
Sbjct: 230 SPPGSIPDYPTVHGITKKVTVTGVALGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAEL 288
Query: 195 NTISLGVGMKF 205
NT+ G +KF
Sbjct: 289 NTVRGGAAIKF 299
>gi|255264827|ref|ZP_05344169.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255107162|gb|EET49836.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 203
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 10/163 (6%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG--- 59
+ S+L L + + A + V Y D+ G YAG
Sbjct: 1 MMKFVSVTSALVLGATTPSFAGTLEQAEIDPMVETVTMAPAPTY---GRDWTGGYAGIQL 57
Query: 60 --LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
+ + A + AGY + + G E D T + + +
Sbjct: 58 GLGQVDVDPDGADLNGDGALYGVHAGYMYDLGRYVLGGELDYDLT-EIESTELAGKVDSV 116
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
L+ R GY+ + ++L Y T G +T G G
Sbjct: 117 LRLKGRVGYD-AGAILPYMTAGFAQTDASDTALGGVDDGYFFG 158
>gi|296447726|ref|ZP_06889642.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium
OB3b]
gi|296254758|gb|EFH01869.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium
OB3b]
Length = 840
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 30/139 (21%)
Query: 75 NAGGSIFAGYNVEDSCIMYGVEGDV----RYTVPVLADNIHSLH----------GIGGSL 120
G + AG N + + ++ G+E D+ T I G++
Sbjct: 652 GFIGGLQAGINQQAAGVLMGLEADLHGVSGNTDTRWRMGIKDAISTYASRTTTLNYLGTI 711
Query: 121 RIRGGYEVSDSLLLYATVGPDVA--------------QKYETGKAGEITPIAIGGTAGVG 166
R R GY + +L +Y T G + +G T G G
Sbjct: 712 RGRLGYLATPTLAIYGTGGLAYGGVISAGIISSQRVNGGALSFNFPAFQDSLLGWTVGAG 771
Query: 167 VEVGGLSESLVARLEY-RA 184
VE LS +++Y R
Sbjct: 772 VE-WALSPDWSVKIDYLRY 789
>gi|323138506|ref|ZP_08073575.1| porin [Methylocystis sp. ATCC 49242]
gi|322396302|gb|EFX98834.1| porin [Methylocystis sp. ATCC 49242]
Length = 300
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 52/208 (25%), Gaps = 68/208 (32%)
Query: 52 DFNGPYAGLSALYNGSFGEEAH-------------------------------HNAGGSI 80
+ G Y GL+A A+ G
Sbjct: 40 TWTGFYVGLNAGGTWGQSNSANLSSFALFNDPLWFQGNAFASSAWGAVPTSNASGFIGGG 99
Query: 81 FAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG--------------------GS 119
GYN + + GVE D++ + + G+
Sbjct: 100 QIGYNWQFGGSFLTGVEADIQGIAASSGRSSVTGVAFNALTGAMAMTTTDVSKRLDYLGT 159
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETG---------------KAGEITPIAIGGTAG 164
+R R GY V+ +LL Y T G + +G TAG
Sbjct: 160 VRGRLGYLVTPTLLAYGTGGLAYGGVGLNASQFSFDTGAFFGAGIGNTTFSNTLVGWTAG 219
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEG 192
GVE + A+ EY
Sbjct: 220 GGVEWMFM-PGWSAKGEYLYYDLGSTTN 246
>gi|146278175|ref|YP_001168334.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC
17025]
gi|145556416|gb|ABP71029.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC
17025]
Length = 197
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 68/194 (35%), Gaps = 20/194 (10%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA---HHNA 76
A A P+ A +V + V D++G Y G Y E + + A
Sbjct: 16 PAFAGGPITVAP---EPIVEPMPAPVVVAPVTDWSGFYVGGQLGYGDVGTEISGLDGNGA 72
Query: 77 GGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYA 136
G + AGY + + G E + Y + + + +L++ G ++ LLYA
Sbjct: 73 IGGVHAGYRYDFGRAVVGAE--IAYDMTNIDIGDSAELDNVATLKLMAGGKI-GRGLLYA 129
Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA-----RLEYRASKYSKVE 191
T G A + G G+G + L++ R E+ + +
Sbjct: 130 TAGGTWADVTSDAGDPDD-----GYVYGIGYDY-MLNDRWSVGAELLRHEWDTFDDAGTD 183
Query: 192 GFYNTISLGVGMKF 205
T+ VG +F
Sbjct: 184 ADATTLQAKVGFRF 197
>gi|254485896|ref|ZP_05099101.1| outer membrane protein, putative [Roseobacter sp. GAI101]
gi|214042765|gb|EEB83403.1| outer membrane protein, putative [Roseobacter sp. GAI101]
Length = 198
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 22/200 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++ + +A ++F + A + + P N D+ G Y GL
Sbjct: 1 MKRTMKFATAALVASSAFAGSAFAGSLSEPVVEPVMMEPVPVVNT----GGDWTGFYTGL 56
Query: 61 SALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG 118
Y + G G AGYN + + G E D T L + ++ +
Sbjct: 57 QLGYADADGPGNLDGDNGSYGFHAGYNYDFGRFVAGAELDYDKTDIDLNNGAATIDSV-A 115
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG----TAGVGVEVGGLSE 174
+++GGY+ + +LYAT G A + G I + T VG E+
Sbjct: 116 RAKVKGGYDFGN-YMLYATGGYAQADTTLGDEDGAFYGIGMTYRVSETYSVGAEL----- 169
Query: 175 SLVARLEYRASKYSKVEGFY 194
LE+R S V G
Sbjct: 170 -----LEHRFSDVGGVSGSD 184
>gi|220921616|ref|YP_002496917.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946222|gb|ACL56614.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 48/175 (27%), Gaps = 49/175 (28%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAH---------------------------HNAGGSIFAG 83
+ G YAG +A Y G G
Sbjct: 39 FTWTGFYAGFNAGYGFDVSSNNGPTVLGVGPATGLVFAPTVIAFRNQNNLDGFVGGGQVG 98
Query: 84 YNVED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIR 123
YN + + + G+E D ++ N + G++R R
Sbjct: 99 YNYQFTPGAGFVIGLEADAQFADFGRNRNRFIATGPIAAQTVFNPAGIAGLDWFGTVRGR 158
Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177
GY V D +L Y T G G TAG GVE ++S +
Sbjct: 159 LGYAV-DRVLFYGTGGFAYGGGGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFL 212
>gi|163736518|ref|ZP_02143937.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis
BS107]
gi|161390388|gb|EDQ14738.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis
BS107]
Length = 194
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 54/174 (31%), Gaps = 18/174 (10%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ V ++++A A A A + PT D+ G Y G
Sbjct: 1 MTRIVSMAAIAAALSTPAFAGNL----EEPVVAPAPTAPPVVVANDGGDWTGAYIGGQIG 56
Query: 64 YNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
+ + + + AGYN + + G E D T L + + +R
Sbjct: 57 QLDADTSNGLSGDDVSYGVHAGYNYDFGRFVLGGEIDYDATDVDLGGGAAT---VDSVMR 113
Query: 122 IRG--GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG------GTAGVGV 167
+ GY+ +L Y T G + GE I + T G V
Sbjct: 114 GKVKAGYDF-GPVLAYVTGGVAQVDTSVGDETGEFYGIGVAYRVTDQWTVGGEV 166
>gi|39937375|ref|NP_949651.1| hypothetical protein RPA4315 [Rhodopseudomonas palustris CGA009]
gi|39651233|emb|CAE29756.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 275
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 76/258 (29%), Gaps = 81/258 (31%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----------- 67
+A AAD G P ++ G Y G Y S
Sbjct: 28 QTAYAADMPDYGPLRG--------ALVETPRVINWEGFYVGGQGGYGTSDMDFTNSTQGI 79
Query: 68 ---------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV------- 99
G+ + H G F GYN + ++ G+E +
Sbjct: 80 VSNLLVNTAVQGALGVSSWPVLGKSSSHGQGWGGFVGYNAQWDDVVLGIEANYMHGNFGG 139
Query: 100 ----RYTVPVLADNIHSLHGIG----------GSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ + ++ G GS R+R GY S L YA G + Q
Sbjct: 140 STSGSMARQISSGGVNYGAIYGASAGINVHDVGSARLRAGYAF-GSFLPYAFGGVALGQA 198
Query: 146 YETGKAG-----------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
A + + G + GVG++ L L R E+ K++
Sbjct: 199 DIVQSASVIGTDAGGTWVLSGSQVQNSHFIYGYSGGVGMD-MMLYRGLFVRAEWEYQKFA 257
Query: 189 K-VEGFYNTISLGVGMKF 205
+ +T+ G+G KF
Sbjct: 258 APINTAVSTVRGGIGYKF 275
>gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 326
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 13/171 (7%)
Query: 47 VPIRHDFNGPYAGLSALYNGS-------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
++ N Y G A ++ + + + G +F GY+ D + G +
Sbjct: 19 QAAENNTNNFYIGAKAGWSKYQDACLYGYTKCEEDSLGYGLFVGYDFTDWFAIEGGVTNH 78
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIA 158
+ I L + GY ++D++ LY VG G+ + +
Sbjct: 79 NEVNSSYQNYDVEALAISSDLSTKFGYRLTDNVQLYTKVGISYQHINKTMSDLGDFSGSS 138
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA----SKYSKVEGFYNTISLGVGMKF 205
GG +G++ L + R EY+ + ++ + S+G+ +F
Sbjct: 139 FGGLVAMGIDY-KLDNNWSLRGEYQFIDGIGDDTSLKADLHFTSVGIKYRF 188
>gi|296447762|ref|ZP_06889677.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
gi|296254739|gb|EFH01851.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
Length = 732
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 51/173 (29%), Gaps = 32/173 (18%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNI 110
+G +H AG SI A GY+ I+YGVE D Y + A +
Sbjct: 59 SGGRLEGFGADAFGLAAPSHDRAGASIGAQIGYDWRKGEIVYGVETDFNYLGLRRAATGL 118
Query: 111 HSLHGIGG----------------SLRIRGGYEVSDSLLLYATVGPDVAQ---------- 144
+ G SLR R G L+Y T G
Sbjct: 119 FAAPSSFGLGGYALTADESSNSFMSLRGRLGRAY-GPWLVYGTGGVAAGGWRGASNLARL 177
Query: 145 -KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
A + G GV+ L + ARLEY + Y T
Sbjct: 178 PSLALYSAPLSQSSRMKYAIGAGVQ-RALGDHWSARLEYLYLNQQSQKQLYET 229
>gi|319784137|ref|YP_004143613.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170025|gb|ADV13563.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 255
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 41/188 (21%)
Query: 49 IRHDFNGPYAGLSALY-------------NGSFGEE-----------AHHNAGGSIFAGY 84
+D++G Y G NG F + G I AG
Sbjct: 36 SAYDWSGLYVGGHLGVANGDITATDMTEPNGGFFTDLVPAGTEGFDFNKAGVAGGIHAGA 95
Query: 85 NVEDSCIMYGVEGDVRYTVPVL---------ADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
+ + G E T +D + ++ R GY D +L+Y
Sbjct: 96 QWQWGQFILGGEATWTATGIRKTITSPYFPDSDTETAKISNYATVVGRVGYAF-DRVLIY 154
Query: 136 ATVGPDVAQKYETGKAGE------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
A G + + + G G G++ L+ +L ++Y
Sbjct: 155 AKAGYAGGKVDFRARDNDALVTYEKNEWQNGYALGAGIDY-ALTNNLSLGVDYTHVDLGH 213
Query: 190 VEGFYNTI 197
+ +
Sbjct: 214 KTSTGDNV 221
>gi|260459523|ref|ZP_05807778.1| outer membrane protein-like protein [Mesorhizobium opportunistum
WSM2075]
gi|259035077|gb|EEW36333.1| outer membrane protein-like protein [Mesorhizobium opportunistum
WSM2075]
Length = 436
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 39/200 (19%)
Query: 44 NRYVPIRHDFNGPYAGLSALYNGS--------FGEEAHHNAGG-SIFA----GYNVEDSC 90
+ +++ G Y G S G + GG F GY+ +
Sbjct: 237 AAFETPAYNWTGFYIGGGLGAGASVHQIEIPPLGGAKFNGLGGEGAFGELNVGYDQDFGS 296
Query: 91 IMYGVEGDVRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD---V 142
+ GV D RY+ + +I+ G + R G ++++S L YA G
Sbjct: 297 WVAGVMVDARYSGMTSKLDLGVGSINVDTDYGFDVLGRVGMKMNESTLAYALAGYSWQHF 356
Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG---------- 192
+ G + G G+E +S ++ LEYR S++++ +
Sbjct: 357 DLNASDPVGDIADWGSSGFSVGAGLET-AVSSNMTIGLEYRYSQFAEKDLSFLLGSGAPD 415
Query: 193 -------FYNTISLGVGMKF 205
++T+ LG KF
Sbjct: 416 GLVTTTPSFHTVRLGAKYKF 435
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 62/201 (30%), Gaps = 38/201 (18%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68
VS AL +A AAD V+ G +++G Y G +
Sbjct: 14 AVSVFAL--MSAAHAADVVQPVEASG----------------FNWSGLYVGFGVGAGANV 55
Query: 69 GEEAHH------------NAGGSIFAGYNVE-DSCIMYGV-----EGDVRYTVPVLADNI 110
+ G + AGY+ + G GD++ + +
Sbjct: 56 HKLGSDFIPISLNGIGGEGVYGELTAGYDYMVSPRFLLGGLLDVHVGDIKTKIDAAGFDA 115
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEV 169
G +R GY + + L Y G + AG G G G+E
Sbjct: 116 SIQETYGFDAGLRVGYLFTPNTLGYVLGGYSWQKYKLDSNAGFGFDWDQSGYFVGGGIET 175
Query: 170 GGLSESLVARLEYRASKYSKV 190
++ + + EYR +++
Sbjct: 176 -AINSNWTIKTEYRYTRFGTK 195
>gi|310639322|ref|YP_003944081.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308752898|gb|ADO44042.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 261
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 30/224 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAG 59
+ + + +A+F ++ +A + P + + P + G Y G
Sbjct: 17 LSTFKWISIMRYICIAAFLASTSAIAANAGGLSTPVMEPPVIMVQPTPMPAPSWQGAYVG 76
Query: 60 LSALY---------------NGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEGDV-- 99
+ Y G+ + A G +I GY+ + + ++G+ G+
Sbjct: 77 ANVNYGDLSVDSTGVLETALQGAGFDTTVATADGVNYAIRGGYDWQFNNWLFGLGGEYSF 136
Query: 100 -RYTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151
Y + D +I + +R GY S S Y VG A T
Sbjct: 137 GSYDGGLSGDLVTALGTDIDLSIDSVATAYLRAGYAFSQSTAAYLLVGYTWATAEATLGG 196
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
+ + G+GVE + + EY + + + +
Sbjct: 197 TTYSEDYEAASYGLGVE-HRFNRAWSVYGEYVYTDFGDINPTND 239
>gi|289209494|ref|YP_003461560.1| OmpA domain protein transmembrane region-containing protein
[Thioalkalivibrio sp. K90mix]
gi|288945125|gb|ADC72824.1| OmpA domain protein transmembrane region-containing protein
[Thioalkalivibrio sp. K90mix]
Length = 215
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 62/191 (32%), Gaps = 36/191 (18%)
Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHNAGG-----------SIFAGYNVEDSCIMY-GVE- 96
F+G Y G + G + + GG + G+ +Y GVE
Sbjct: 26 ASPFHGSYVGGQLGWVGYDIDYREADDGGISGLSASGLTGGVMTGWGTVLDNGLYLGVEF 85
Query: 97 ----GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------KY 146
D TV + + + R G V+DS+LLY G ++ +
Sbjct: 86 DAQTEDADLTVRIDDAELGVDSKYSYGITGRLGTTVNDSVLLYGLAGYQRSRFDYRLTET 145
Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV------------EGFY 194
+ + G GVGVE L L R EY + Y +
Sbjct: 146 DEDLSLRFKDSINGARIGVGVEYQ-LDNRLFMRAEYSYTFYESERYRIEDEFTLRFDPDA 204
Query: 195 NTISLGVGMKF 205
+LG+G +F
Sbjct: 205 QRFTLGLGYRF 215
>gi|192293657|ref|YP_001994262.1| hypothetical protein Rpal_5301 [Rhodopseudomonas palustris TIE-1]
gi|192287406|gb|ACF03787.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 561
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 63/191 (32%), Gaps = 37/191 (19%)
Query: 37 VVPTIATNRYV-PIRHDFNGPYAGLSALYNG-------------SFGEEAHHNAGGSIFA 82
+P V P+ ++ G Y G + G A I
Sbjct: 22 DMPRFPPLMPVAPVSWNWTGLYWGAHVGGSFGSSSFSDPAGPALYGGSVRSPAALAGIQI 81
Query: 83 GYNVE-DSCIMYGVEGDVRY------------TVPVLADNIHSLHGIGGSLRIRGGYEVS 129
GYN + ++ + GVE D+ + ++ N +L R G+
Sbjct: 82 GYNYQPNANWLIGVEADLSSMNAKGTNTCMASSGLFISSNCRVRQDALATLTGRAGFVAG 141
Query: 130 D--SLLLYATVGPD-------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
LLYA G +A Y G + ++ G T G G+E L+ + +L
Sbjct: 142 PGGRTLLYAKGGAAFLSERLDIAVGYPLGNSTDVNDGRWGWTVGAGIE-RALAPAWSVKL 200
Query: 181 EYRASKYSKVE 191
EY + + +
Sbjct: 201 EYNYADFGSRD 211
>gi|296445959|ref|ZP_06887909.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256477|gb|EFH03554.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 292
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 36/172 (20%)
Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSL 113
GP SA G GYN + + G+E D++ + +S
Sbjct: 74 GPNLATSAALATGSYPSDDARFLGGGQIGYNFQASPSFVLGLEADIQGVAGSRSTAKNSG 133
Query: 114 HGIG--------------------GSLRIRGGYEVSDSLLLYATVGPDVAQKYET----- 148
GI G++R R G+ + +LLLYAT G + T
Sbjct: 134 LGIPAGFLGVVASDTTTTKRLDYLGTMRGRVGFLAAPTLLLYATGGLAYGEVGSTVTIGQ 193
Query: 149 ---------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
G G + + +G TAG G+E L+ +LEY V
Sbjct: 194 ANLPFAPSFGSFGGYSDLRVGWTAGGGLEWL-LAPKWSVKLEYLYYDLGSVT 244
>gi|85374383|ref|YP_458445.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594]
gi|84787466|gb|ABC63648.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594]
Length = 223
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 81/233 (34%), Gaps = 45/233 (19%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+A+ ++ A+A+ A A + G V ++ AG S
Sbjct: 4 AVALILAGTAMATASPALAQTVQNDSPFTGAR----------VQAVTGYDNIKAGSSVDD 53
Query: 65 NGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYT--VPVLADNIHSLHGIGGS 119
+G+ + G I+ GY+V+ ++ G E + ++ + G G
Sbjct: 54 DGNPNNDQSAE--GVIYGAAVGYDVDLGPVVIGPEAEFAWSTADTDFDNGDFEGFGFGNV 111
Query: 120 -------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG----EITPIAIGGTAGVGVE 168
L R G ++ D L Y G A+ G + G G G+E
Sbjct: 112 SADRDLYLGARVGAKIGDQALAYVKGGYTNAKLNIRSNDGTTKFDTDYDLDGYRVGGGLE 171
Query: 169 VGGLSESLVARLEYRASKYS----------------KVEGFYNTISLGVGMKF 205
++ ++ EYR S YS V+ + +S+G+G++F
Sbjct: 172 Y-AINRNMFVNAEYRYSNYSRAEVDFDGTLPDSDRFDVDLDRHQVSVGLGVRF 223
>gi|299134299|ref|ZP_07027492.1| porin [Afipia sp. 1NLS2]
gi|298591046|gb|EFI51248.1| porin [Afipia sp. 1NLS2]
Length = 275
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 69/238 (28%), Gaps = 86/238 (36%)
Query: 52 DFNGPYAGLSALYNGS---------------------------------FGEEAHHNAGG 78
++ G YAG A Y + G+ H +
Sbjct: 40 NWQGFYAGGQAGYGSADMNFSSSNSAMIAQLLANTNIENEMNVSSWPLLGGKTNTHQSQV 99
Query: 79 SIFAGYNVEDSCIMYGVEG------------------------DVRYTVPVLADNIHSLH 114
F GYN + ++ GVE D Y + + +
Sbjct: 100 GGFVGYNSQWDDVVLGVEANYMHGTFSGASVSAPVSRGMLLTSDSLYHIVTVNSSKSISI 159
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-------------------------YETG 149
G++R R GY + + Y G + + +
Sbjct: 160 SDMGTIRARAGYVWGN-FMPYVFGGAALGRGNIYSAVSVSDQKGADSAAAQAATPVTLSA 218
Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK--VEGFYNTISLGVGMKF 205
G + G TAG+G EV ++ AR E+ ++ + NT+ G+G KF
Sbjct: 219 SDGISGKMLYGYTAGLGTEVMLF-GNVFARAEWEYIRFVNAGADVNINTVRGGLGYKF 275
>gi|169825359|ref|YP_001691252.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
gi|168199281|gb|ACA21227.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
Length = 583
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 62/222 (27%), Gaps = 63/222 (28%)
Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH----- 74
+A AAD + P +A V + GPYAG+ Y GS E
Sbjct: 20 AASAADLPQLTP-------PMMAFAPLVTPSFTWTGPYAGVFFGY-GSLDESGTGRCIGP 71
Query: 75 ---------------NAGGSIFAGYNVED---SCIMYGVEGDV------RYTVPVLADNI 110
+ GYN++ S ++ G D Y +L +
Sbjct: 72 RCVRLPALSPGARAADLSAGSEVGYNLQASPGSGLVIGAAVDYQTTRLRGYGESILVREV 131
Query: 111 HSLHGIG------------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA------- 151
G++R + GY D L +Y T G
Sbjct: 132 DENSDFAAFYHLGQRLDTFGAVRGKAGYAF-DRLFVYGTGGLAYGYVRIDVGTALTVGDR 190
Query: 152 -----GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
G + +G AG G E +S L + E
Sbjct: 191 QFAAQGLTSGFRLGYAAGGGAEY-AISPHLSVKAEGLYYDLG 231
>gi|148252997|ref|YP_001237582.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1]
gi|146405170|gb|ABQ33676.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1]
Length = 665
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 74/236 (31%), Gaps = 75/236 (31%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALY-------------------NGSFGEEAHHNAGGS--- 79
A + Y +D+ G Y G A +GSFG + +
Sbjct: 3 AQSPYTSTVYDWTGWYIGAHAGALRGSSSWTATPLGPGGPPVSGSFGLPLNFDFMAGTGT 62
Query: 80 ----IFAGYNVEDSC-IMYGVEGDVR---------YTVPVLADNIHSLHG---------I 116
+ GYN +M G+EGDV Y+V I G
Sbjct: 63 YVLGLQGGYNYVLPSRVMLGIEGDVSVPNSDVVVPYSVRGGQTVISPAIGQVTYSEAVIH 122
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI---------------AIGG 161
GS+R R GY D LLY T G T +G
Sbjct: 123 YGSVRGRVGYAF-DHFLLYGTGGFAWTYDQLTRSQDASPVTGSFVPAGTLETKLLWRLGW 181
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMK 204
AG+GVE+ ++ + A+ E+ + + + + ++ +G+ K
Sbjct: 182 VAGIGVEIP-ITGNWSAKAEFLETGFGRRGAFFAASIDAFRSDFATQSVRVGLNYK 236
>gi|311280058|ref|YP_003942289.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1]
gi|308749253|gb|ADO49005.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1]
Length = 234
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 47/183 (25%)
Query: 53 FNGPYAGLSALYNGSFGEEAH---------------HNAGGSIFAGYNVE-DSCIMYGVE 96
F+G Y G + Y + + G I AG+ + D+ I+ GVE
Sbjct: 25 FDGWYVGGNFGYGSGTNHDVYVVPGNAEASGTPRDIDGTIGGIQAGHYWQLDNNIVLGVE 84
Query: 97 GDVRYTVPVLADNIHSLHGIGG-----------SLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ ++ I + I +L + GY + + L+Y T G VA
Sbjct: 85 T--GWQAANISGGISNAESISEYYDQIEINQAFNLNFKAGYAIEN-WLIYTTAGLTVASM 141
Query: 146 Y----------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+G G GVE + S A LEY+ + +
Sbjct: 142 DYARGCYSDPTTTIKDCLDPYDATADGTRVGYNVGAGVE-WKFNNSFSAALEYKYTDLGE 200
Query: 190 VEG 192
+
Sbjct: 201 SDA 203
>gi|148258433|ref|YP_001243018.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146410606|gb|ABQ39112.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
Length = 193
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 63/195 (32%), Gaps = 39/195 (20%)
Query: 46 YVPIRHDFNGPYAGLSAL-----YNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDV 99
+ + G Y G +G+FG E+ G + G + + + G EG
Sbjct: 3 QISPVRSWTGLYVGGHLGGEFSGASGAFGRESR--FLGGLQFGADYQFAPNWVLGAEGQY 60
Query: 100 RYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYATVGPDVAQKY--ETGKA 151
+ + + G L R GY LLY G + +A
Sbjct: 61 SWLAGNGQTSSLGRRELTRDRNGIGGLTGRLGYTWGAG-LLYVKGGYAYQDRSYGVRSRA 119
Query: 152 GEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKV---------------- 190
G A+ G T G G+E + + +LEY+ +
Sbjct: 120 GAPVAFAVRDNKSGYTVGAGLEY-MFAPNWSTKLEYQYYDFGTARFVAPSPGRLVRNGTF 178
Query: 191 EGFYNTISLGVGMKF 205
+ +T+S+GV +F
Sbjct: 179 DSTLHTVSVGVNYRF 193
>gi|188583655|ref|YP_001927100.1| porin [Methylobacterium populi BJ001]
gi|179347153|gb|ACB82565.1| porin [Methylobacterium populi BJ001]
Length = 288
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 51/177 (28%), Gaps = 52/177 (29%)
Query: 52 DFNGPYAGLSALYNGSFGEE-----------------------------AHHNAGGSIFA 82
+ G YAG +A Y ++ ++ G
Sbjct: 40 TWTGFYAGFNAGYGFGTQDDRAPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQI 99
Query: 83 GYNVED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRI 122
GYN + S + GVE D +Y N S G++R
Sbjct: 100 GYNYQFTPGSGFVIGVEADAQYADFGRNRNRFVSTSPLAAQQVFNPAGLSGLDFFGTVRG 159
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
R GY D L+Y T G G G AG GVE ++S +
Sbjct: 160 RLGYAF-DRTLVYGTGGFAYGSGGGREFGTGVSSDDFQTGWVAGGGVEYALPTDSFL 215
>gi|220924333|ref|YP_002499635.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060]
gi|219948940|gb|ACL59332.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060]
Length = 494
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 39/141 (27%)
Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAG--LSALYNGSFGEEAHHNAGGS---------- 79
+P A + D++G Y G L + +G GG
Sbjct: 20 ASRAADLPAQAAPIPAFVVQDWSGFYVGSHLGGVVSGRGERRVVSGDGGGLIPAGFGGRG 79
Query: 80 ------------------IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
+ AGYN + + G+E D+ PV + GS+R
Sbjct: 80 GRTGIAIGRIEGRTVFQGVHAGYNWQQGSAVAGIEADLASLGPV--------DDLLGSVR 131
Query: 122 IRGGYEVSDSLLLYATVGPDV 142
R G+ SD LL+Y T G +
Sbjct: 132 GRLGFG-SDRLLIYGTGGLAI 151
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 38/131 (29%), Gaps = 44/131 (33%)
Query: 52 DFNGPYAGLSALYNGSFGEEAHHNAG---------------------------------- 77
+ G Y G + +
Sbjct: 265 SWAGAYVGGHLGALHTLSGRTFGSTALAGGEPGGAGQRGIDGGGGGGGAVAFAGLARSPA 324
Query: 78 --GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
G GYN +++ ++YG EGDV + H G++R R G+ + L+Y
Sbjct: 325 ILGGAHLGYNWQNAALVYGAEGDVSVSAADS-------HRYLGTIRGRLGWS-GGATLVY 376
Query: 136 ATVGPDVAQKY 146
AT G A
Sbjct: 377 ATAGVAFAGNE 387
>gi|170747715|ref|YP_001753975.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654237|gb|ACB23292.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 276
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 51/172 (29%), Gaps = 48/172 (27%)
Query: 53 FNGPYAGLSALYN-----------------------GSFGEEAHHNAGGSIFAGYNVE-- 87
+ G Y G++A Y SF + + G GYN +
Sbjct: 41 WTGAYFGINAGYAFDASSRTNNTFAVPFPYAAPGTVASFRDRSQDGFSGGAQIGYNWQIT 100
Query: 88 -DSCIMYGVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEV 128
S ++ G E D +Y N S G++R R GY
Sbjct: 101 PGSGVVIGFEADAQYLDFGRNRNNAFISGAVAPGYYVTDPRGLSSLDYFGTVRGRLGYAF 160
Query: 129 SDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177
D L+YAT G G G G G+E ++S +
Sbjct: 161 -DRTLVYATGGFAYGSGSADRSFGGYAGNDSFRTGYAVGGGIEYALPTDSFL 211
>gi|119385805|ref|YP_916860.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
gi|119376400|gb|ABL71164.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
Length = 203
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 20/167 (11%)
Query: 51 HDFNGPYAGLSALYNGSF--GEEAHHNAGG--SIFAGYNVE-DSCIMYGVEGDVRYTVPV 105
+ + G YAG+ Y+ + GG I AGYN + + ++ G E ++
Sbjct: 45 NTWTGFYAGMQMSYSDFSVNRDGVDDATGGVYGIHAGYNHQLHNNMVIGGEITFDHS--- 101
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
ADN ++R + GY ++ L+Y G + +A + G G+
Sbjct: 102 SADNDVWQVERLMTVRAKVGYA-HNNWLVYGLAGYAHVRTEGADRAHGKSG---GAVFGI 157
Query: 166 GVEVGGLSESLVARLE---YRASKYS----KVEGFYNTISLGVGMKF 205
G + +S+ + YR S + +E ++ V +F
Sbjct: 158 GADY-AVSDKWLVGGSWEGYRFSDFKNDPDNMEVDGGSVRFRVSYRF 203
>gi|296446346|ref|ZP_06888291.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Methylosinus trichosporium OB3b]
gi|296256119|gb|EFH03201.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Methylosinus trichosporium OB3b]
Length = 247
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 53/194 (27%), Gaps = 41/194 (21%)
Query: 53 FNGPYAGLSALYNG----SFGEEAHHNAGGSIFAG---------------------YNVE 87
+ G Y G + Y + G G AG YN +
Sbjct: 40 WTGFYLGANVGYGWLDNYTRGNSITGWNGAGWVAGAPNVADNGSSNGGVVGGGQVGYNYQ 99
Query: 88 -DSCIMYGVEGDVRYTVPVLAD----NIHSLHGIGGSLRIRGGYEVSDS-LLLYATVGPD 141
+ GVE D++ G++R R G + LL+Y T G
Sbjct: 100 FHPAWVVGVEADMQAANIGDNGPSFLGTTRAVDWFGTVRARIGTTLFSPELLIYGTGGFA 159
Query: 142 VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--GFYN---- 195
G G + + A++EY + + GF N
Sbjct: 160 YGDVRLKHALLGTLGQTGTGWTAGGGLEWLFAPNWSAKVEYLYTDIGSSDWGGFNNFEQR 219
Query: 196 ----TISLGVGMKF 205
++ GV F
Sbjct: 220 VHVQSVRAGVNYHF 233
>gi|163853839|ref|YP_001641882.1| porin [Methylobacterium extorquens PA1]
gi|218532784|ref|YP_002423600.1| porin [Methylobacterium chloromethanicum CM4]
gi|240141293|ref|YP_002965773.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254563802|ref|YP_003070897.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|163665444|gb|ABY32811.1| porin [Methylobacterium extorquens PA1]
gi|218525087|gb|ACK85672.1| porin [Methylobacterium chloromethanicum CM4]
gi|240011270|gb|ACS42496.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254271080|emb|CAX27087.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 296
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 51/197 (25%), Gaps = 60/197 (30%)
Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYN-----------------------------GSFG 69
+ P + G YAG +A Y G
Sbjct: 27 AAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNGAAPVVGVNSLTGLVRPGQTAVIAFGG 86
Query: 70 EEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRY-----------------------TV 103
G GYN + S ++ G+E D +Y
Sbjct: 87 NSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYVDFGRDRNQFAVANSNPAFPGVAAQ 146
Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA---GEITPIAIG 160
V N S G++R R GY D +L Y T G G
Sbjct: 147 QVFNPNGLSSLDFFGTVRGRLGYAF-DRVLFYGTGGFAYGAGGGRQFGLPNSSSDDFRTG 205
Query: 161 GTAGVGVEVGGLSESLV 177
AG GVE ++S +
Sbjct: 206 YAAGGGVEYALPTDSFL 222
>gi|94497477|ref|ZP_01304047.1| outer membrane protein-like [Sphingomonas sp. SKA58]
gi|94423108|gb|EAT08139.1| outer membrane protein-like [Sphingomonas sp. SKA58]
Length = 217
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 81/234 (34%), Gaps = 46/234 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+KL +A ++ + + A P G P + + +D G AG
Sbjct: 1 MRKLMVATLLAGVGV--------ATPALAQDVGSTFTGPRV----EAILGYDHVG--AGS 46
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
N +++ I AGY+V + GVEG+ +T + + L G
Sbjct: 47 DVDNNNGRDDQSIDGLLYGIGAGYDVNLGSAVVGVEGE--WTDSTAKSDRYDLTDQFGFG 104
Query: 121 R----------IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI----GGTAGVG 166
R R G + + L+Y G ++ + T G G G
Sbjct: 105 RVSQGRDLYIGARAGILANPATLVYVKGGYTNSKLNILAGNTDETTDRSFKLDGWRIGAG 164
Query: 167 VEVGGLSESLVARLEYRASKYS---------------KVEGFYNTISLGVGMKF 205
VE ++ + A+LEYR S Y+ V+ + + VG +F
Sbjct: 165 VE-RAINTNTFAKLEYRYSNYTDAHIDYMDGATSADFDVDTDRHQVVASVGWRF 217
>gi|87199458|ref|YP_496715.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM
12444]
gi|87135139|gb|ABD25881.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM
12444]
Length = 223
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 43/199 (21%)
Query: 49 IRHDFNGPYAGLSALYNGSF---------GEEAHHNAGGSIFAG---YNVEDS-CIMYGV 95
F+G +A Y+ + + + G + G Y++ ++ G
Sbjct: 26 PAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTNLVAGA 85
Query: 96 EGDVRYTVPVLADNIHSLHGIGGS---------LRIRGGYEVSDSLLLYATVGPDVAQKY 146
E ++ + +N + + R GY +S S ++Y G A+
Sbjct: 86 EAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYN 145
Query: 147 ETGKAGE----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------- 189
G G A G G GVE + E+ +LEY+ + YSK
Sbjct: 146 LQGTDGTTNLRQRLDADGYRVGAGVE-QKVGENAFVKLEYKYANYSKGEFDFNGDTPDSS 204
Query: 190 ---VEGFYNTISLGVGMKF 205
++ ++I+ GVG++F
Sbjct: 205 RFNLDTDRHSITAGVGVRF 223
>gi|148555915|ref|YP_001263497.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1]
gi|148501105|gb|ABQ69359.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1]
Length = 172
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 52 DFNGPYAGLSALYNGSFGEEA-----HHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPV 105
DF GPY G + G A G + FAGYN+ GVE ++
Sbjct: 22 DFAGPYVGGGVTLDNVQGSGALEGVGFSGVGATAFAGYNLPVGASTFAGVEANIDLN-TA 80
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
A I + G G + R GY+++DS LYA G + G +G + G
Sbjct: 81 DAGGIEAKWGWG--VGARFGYKLNDSTALYARAGYARGKIEVLGSSGWGDGVRY----GA 134
Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
G+E +++S+ R E+ + Y + N +LG+ F
Sbjct: 135 GLETR-VTDSVSLRAEFTQTNYES-DIINNQGTLGIVFGF 172
>gi|296446925|ref|ZP_06888861.1| porin [Methylosinus trichosporium OB3b]
gi|296255600|gb|EFH02691.1| porin [Methylosinus trichosporium OB3b]
Length = 429
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 56/181 (30%), Gaps = 30/181 (16%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHNAGGSIFAGYNVE-DSCIMY 93
PT+ G G + +G+F + G + GY+ + +
Sbjct: 218 PPTLPPFEGGGPSF---GVLVGTAVG-DGAFADPVPMQGAGFLGGLRLGYDFKLTPRFLV 273
Query: 94 GVEGDVRYTVPVLADNIHSLH------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
G E D +Y + + G G+ R R GY V D +Y T G
Sbjct: 274 GFETDSQYRSDLGGGSNSHGSISGVRGGYLGTFRGRLGY-VIDRWTVYGTGGLAYGHILA 332
Query: 148 --------------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
T + + G T G GV+ L+ L R EY ++
Sbjct: 333 PRTFSGSNLINSIPTTGVSQSYQLVPGWTVGAGVQF-ALAPGLSLRAEYLYTQLQHSNPT 391
Query: 194 Y 194
Y
Sbjct: 392 Y 392
>gi|170726262|ref|YP_001760288.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811609|gb|ACA86193.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 184
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 18/178 (10%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
I + V +D +G Y G S E++ + G + GYN D +G+E ++
Sbjct: 13 AIFASSNVAAANDHSGFYVGGSLGQLKVKTEDSDNGLGFGAYGGYNFND---WFGLEANM 69
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIA 158
+ + + G + + Y+++D+ +Y VG G +
Sbjct: 70 YLSGDLGGNGYDLGAGTF-AFTPKFTYQINDTFAVYGKVGIASMAVVYRPDRGIDEDFTG 128
Query: 159 IGGTAGVGVEVGGLSESLVARL-----------EYRASKYSKVEGFYNTISLGVGMKF 205
G GVGV ++E+L RL EY S+ V+ + +LG+ +F
Sbjct: 129 FGWVYGVGVNAS-ITENLNIRLGYDIVKGDLDSEYSFSE-QNVDTDISNFALGMHYQF 184
>gi|319783372|ref|YP_004142848.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169260|gb|ADV12798.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 400
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 53/172 (30%), Gaps = 21/172 (12%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGS----------FGEEAHHNAGGSIFAGYNVE-DSCI 91
+++G Y G+ + S F + G + AGY+
Sbjct: 2 QPVEEAAGFNWSGAYVGIGGGFGASVHKFSVPGLDFNGLGGNGVFGELTAGYDYMVSERF 61
Query: 92 MYGVEGDVRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
+ G D + + ++ + G + +R GY ++ + L Y G
Sbjct: 62 LLGGFIDANLSNIGPSLSIAGGDVDLTNSYGFDVGLRAGYLLNPNTLGYVLGGYTWQHFK 121
Query: 147 ETGKAGEI----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
G + G GVG+E L + + EYR + Y
Sbjct: 122 LDGSGAADGLEFSQNRSGYVLGVGMET-VLRGNWTLKTEYRYADYGDKSVLD 172
Score = 52.0 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 64/194 (32%), Gaps = 35/194 (18%)
Query: 47 VPIRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG-SIFA----GYNVEDSCI 91
+D+ G YAG + G + GG +F GY+ +
Sbjct: 206 AAPTYDWTGFYAGGALGAGTMVHDLNLNLGLGASGELNGIGGEGVFGEASVGYDHDFGSW 265
Query: 92 MYGVEGDVRYTVPVLADN-----IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
+ GV+ D RY+ + I G R G +V++S L Y G
Sbjct: 266 VAGVQLDARYSGIQTKLDLGPVSIKGDADYGFDALARIGAKVNESTLAYVLGGYSWQHFD 325
Query: 147 ETGKA-GEITPIAIGGTAGVGVEVG----GLSESLVARLEYRASKYSKVEGFY------- 194
+A G + + G +S ++ LEYR S+Y K +
Sbjct: 326 LHAEAPGGGSADIYDWGSSGFSIGGGLETAVSSNMTVGLEYRYSQYQKEDFGSGGILEDT 385
Query: 195 ---NTISLGVGMKF 205
T+ LG KF
Sbjct: 386 PSFQTVRLGAKYKF 399
>gi|299134642|ref|ZP_07027834.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298590452|gb|EFI50655.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 486
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------------GSIFAGYNVE-DSC 90
V ++ G Y Y ++ G G++ GY+ +
Sbjct: 33 VAPVSNWTGFYVTGGFGYGLMSSDQHSTTGGAATSVDTRTGGRGYFGTVGLGYDYQLTPA 92
Query: 91 IMYGVEGDVRYTVPVLADNIHSLHGIGG--------SLRIRGGYEVSDSLLLYATVGPDV 142
+ GV GD ++ + GI G S R GY V+ ++L Y G
Sbjct: 93 WVVGVFGDAQWGDIRGDLIDITTPGISGRLKNDAAYSAGARLGYLVAPNVLSYVNAGYSY 152
Query: 143 AQKYETGKAGE----ITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGF 193
Q + + G G GVE G + + EYR ++Y +
Sbjct: 153 GQFKGSTFSDGVTAIDKSHRDGWFIGGGVENDLNFFGIKAPGWFMKTEYRVTEYDRKNSL 212
Query: 194 YNTISLGVGMKF 205
YN S G G+ F
Sbjct: 213 YNDGS-GNGIAF 223
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 42/186 (22%)
Query: 49 IRHDFNGPY----------------AGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCI 91
+++ G Y L+ NG G++ GY+ + +
Sbjct: 260 AAYNWTGFYLAGGGGYGLMSSDQHTVDLATGANGLDTRAGGRGYFGTVGGGYDWQINPTW 319
Query: 92 MYGVEGDVRYTVPVLADNIHS------------LHGIGGSLRIRGGYEVSDSLLLYATV- 138
+ GV GD ++ + + + + R GY +S + L Y V
Sbjct: 320 VVGVFGDAQFGDIRGSLADATGGGLGAGVTGRLKNDTNYAAGARLGYLISPNALSYVNVG 379
Query: 139 -------GPDVAQKYETGKAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASK 186
G + G G GVE G S + EYR ++
Sbjct: 380 YSHADFKGVALTNATGAAVGSTGKSHRDGWFLGGGVENSLNIFGISSPGWFMKTEYRVAE 439
Query: 187 YSKVEG 192
Y +
Sbjct: 440 YDRKTS 445
>gi|21111442|gb|AAM39773.1| membrane protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66572140|gb|AAY47550.1| membrane protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 377
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 29/171 (16%)
Query: 55 GPYAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS- 112
G G +A + G + A + AGY+ + +YGV + YT L D++ +
Sbjct: 175 GFCGGAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAE--YTRNDLRDSVSAF 232
Query: 113 -----------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKA 151
+LR R GY L Y T G +
Sbjct: 233 STTPALYTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFDHSFASSNTANSFT 292
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
G A G AG+G++ LS+ + +EY ++ + + +G G
Sbjct: 293 GSGGDSANGYQAGIGLQ-RRLSDHVSVGVEYLFTRLQDEDT---RVRVGPG 339
>gi|240142350|ref|YP_002966860.1| putative porin [Methylobacterium extorquens AM1]
gi|240012294|gb|ACS43519.1| putative porin [Methylobacterium extorquens AM1]
Length = 293
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 50/181 (27%), Gaps = 54/181 (29%)
Query: 50 RHDFNGPYAGLSALYNGSFGEEAH-----------------------------HNAGGSI 80
+ G +AG +A Y ++ G
Sbjct: 40 VFTWTGFFAGFNAGYGFGTSDDRGPITAAVPGTYGVFSNPGPQVIAFAGQRSADGFVGGG 99
Query: 81 FAGYNVED---SCIMYGVEGDVRYTV------------------PVLADNIHSLHGIGGS 119
GYN + S ++ GVE D +Y N + G+
Sbjct: 100 QIGYNYQFTPGSGVVVGVEADAQYVDFGSDRNRFVATSPLAPGAVAFNPNTLTGLDYFGT 159
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESL 176
+R R GY D L+YAT G G T G GVE ++S
Sbjct: 160 VRGRLGYAF-DRTLVYATGGFAYGSGGGRDFGLPNFTRDEFQTGWTVGGGVEYALPTDSF 218
Query: 177 V 177
+
Sbjct: 219 L 219
>gi|259415944|ref|ZP_05739864.1| putative outer membrane protein [Silicibacter sp. TrichCH4B]
gi|259347383|gb|EEW59160.1| putative outer membrane protein [Silicibacter sp. TrichCH4B]
Length = 198
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 22/165 (13%)
Query: 52 DFNGPYAG-----LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106
D+ G Y G A + + + GYN + + G E + Y
Sbjct: 45 DWTGFYGGLQYGQGEADLSLGGASASEDFDAFGVHGGYNHDFGRYVLGGE--LMYNDI-- 100
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
+ G SLR R G ++ + Y T G + +I+ G T GVG
Sbjct: 101 -SGDNGGDGDLTSLRARAGMDL-GRFMPYVTAGV--SHLSLASGGADISE--NGFTYGVG 154
Query: 167 VEVGGLSESLVARLEYRASKYSK------VEGFYNTISLGVGMKF 205
E +SE LEY S +S + + + L +F
Sbjct: 155 AEYL-VSERFSVGLEYTKSDFSDAGGVAGADLDTDKVQLRASYRF 198
>gi|163853385|ref|YP_001641428.1| porin [Methylobacterium extorquens PA1]
gi|218532243|ref|YP_002423059.1| porin [Methylobacterium chloromethanicum CM4]
gi|240140802|ref|YP_002965282.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|254563312|ref|YP_003070407.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|163664990|gb|ABY32357.1| porin [Methylobacterium extorquens PA1]
gi|218524546|gb|ACK85131.1| porin [Methylobacterium chloromethanicum CM4]
gi|240010779|gb|ACS42005.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|254270590|emb|CAX26593.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 288
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 52/177 (29%), Gaps = 52/177 (29%)
Query: 52 DFNGPYAGLSALYNGSFGEE-----------------------------AHHNAGGSIFA 82
+ G YAG +A Y ++ ++ G
Sbjct: 40 TWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQI 99
Query: 83 GYNVED---SCIMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRI 122
GYN + S ++ GVE D +Y V S G++R
Sbjct: 100 GYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRG 159
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177
R GY D L+Y T G G G AG G+E ++S +
Sbjct: 160 RLGYAF-DRTLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 215
>gi|157377581|ref|YP_001476181.1| outer membrane protein, putative [Shewanella sediminis HAW-EB3]
gi|157319955|gb|ABV39053.1| outer membrane protein, putative [Shewanella sediminis HAW-EB3]
Length = 182
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 55 GPYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
G Y G + + G G I+ GYN DS +G+E + T ++ +
Sbjct: 26 GFYLGGQVNHTSVEDNIGTLDESAIGLGIYGGYNFNDS---FGIETSIFLTDSLVDEMDL 82
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+ + S IR + +DS+ Y G V + Y + G G GV+V
Sbjct: 83 RIAAVTISPVIR--HAFTDSVTGYLKAGLVVNKTYSNDDGVDEDYRGTGWLFGAGVDVT- 139
Query: 172 LSESLVARLEYRAS----KYSKVEGFYNTISL---GVGMKF 205
L+ESL R+ Y S +YS++E +Y ISL GVG+ +
Sbjct: 140 LTESLALRVSYEMSETEPEYSELENYYADISLKQFGVGLHY 180
>gi|296446779|ref|ZP_06888717.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296255654|gb|EFH02743.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 312
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 52/201 (25%), Gaps = 50/201 (24%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSAL----YNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYG 94
T Y +D+ G+ Y G GYN V + ++G
Sbjct: 59 TSEARTYGYSVYDWASGALGMPFGFSSPYVSGLASLQQDGFIGGAQIGYNHVGPAGFLFG 118
Query: 95 VEGDVRYTVPVLAD----------------------NIHSLHGIGGSLRIRGGYEVSDSL 132
VE D + + ++ + G GS+R R GY + +L
Sbjct: 119 VETDFDGSTLRGSGASNGFASQVDAHGLLHLQAGRADVRAGLGWLGSVRGRFGYFFNPAL 178
Query: 133 LLYATVGPDVAQKYET----------------------GKAGEITPIAIGGTAGVGVEVG 170
L Y T G + + G +G AG G E
Sbjct: 179 LFYGTGGLAYGGTFGSISTLGFHWHPQDPIGHPDNPVLPAWGSFDAARVGWIAGGGFEWS 238
Query: 171 GLSESLVARLEYRASKYSKVE 191
+ + E
Sbjct: 239 -FAPQWSVKTEALYYDLGSRR 258
>gi|92117608|ref|YP_577337.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis
X14]
gi|91800502|gb|ABE62877.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis
X14]
Length = 251
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 29/182 (15%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALY--NGSFGEEAHHNAGG---------SIFAGYNVE 87
P + +D++G Y G + + + S + AGG GY +
Sbjct: 30 PYTKAPPMIAAIYDWSGFYVGANGGWGSSRSCWDLTAPVAGGCHDATGGTIGGQIGYRWQ 89
Query: 88 DSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
+ +++G+E + + HS G + GY D+ LLY G
Sbjct: 90 SNNLVFGLEAQGNWADLNGRNVSIDFSRFTNHSRLDAFGLFTGQIGYSW-DATLLYVKGG 148
Query: 140 PDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
V A + GG GVG+E G + + EY
Sbjct: 149 AAVTSNRYRSVDNVSGLQAADSVNDTRWGGVVGVGLEY-GFAPNWSLGFEYDHIFMGNSS 207
Query: 192 GF 193
Sbjct: 208 HT 209
>gi|27380285|ref|NP_771814.1| hypothetical protein blr5174 [Bradyrhizobium japonicum USDA 110]
gi|27353449|dbj|BAC50439.1| blr5174 [Bradyrhizobium japonicum USDA 110]
Length = 256
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 54/195 (27%), Gaps = 35/195 (17%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--------------G 83
T A V +D+ G Y G + + S G G++ G
Sbjct: 29 PYTKAPPPIVAPIYDWTGFYIGANGGWGQSRGCVDFVTLAGTVAGGCASRSGGLVGGQIG 88
Query: 84 YNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135
Y + + + G+E + + G + G+ + S LLY
Sbjct: 89 YRWQTNQFVLGLEAQGDWADIKNTRVSLIDPLLSTTGKTDGIGLFTAQLGWAWNAS-LLY 147
Query: 136 ATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188
G V + GG GVG E G + + +EY
Sbjct: 148 VKGGAAVTHNRLDVFNNLTGVGLDSASHTRWGGALGVGWEY-GFAPNWSVGVEYDHLWMG 206
Query: 189 KVEGFYNTISLGVGM 203
N G G+
Sbjct: 207 N----DNRTFAGAGV 217
>gi|296445166|ref|ZP_06887126.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium
OB3b]
gi|296257340|gb|EFH04407.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium
OB3b]
Length = 467
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 62/196 (31%), Gaps = 18/196 (9%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-----------SFGEEAH 73
D + + + G + G + +F
Sbjct: 58 DVTGSIPMAASAPLVGVDAAHAALSAPLWTGFHVGATIGSGWAITPLAIPNAATFSGVGM 117
Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPVLADNIHSLHGIGGSLRIRGGYEVSD 130
G + AG++ ++ G+ D + + ++ +LR R G S+
Sbjct: 118 SGVAGGVTAGFDYRFGSVVAGIAADGNLKSTSAYLSGVDVTFREAASWALRGRLGGLASE 177
Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAI-GGTAGVGVEVGGLSESLVARLEYRASKYS- 188
L+YAT G A T G+ + G GVGVE L+ L R EY S +
Sbjct: 178 DTLVYATAGVTQAITKLTYPTGDSDDVRYTGAIFGVGVETR-LAAGLYGRAEYLQSLFGQ 236
Query: 189 -KVEGFYNTISLGVGM 203
+G L G+
Sbjct: 237 RNFDGGRYNARLESGV 252
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 59/182 (32%), Gaps = 24/182 (13%)
Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALY----------NGSFGEEAHHNAGGSIFA 82
G +P + G + G Y + + G
Sbjct: 265 GDWSGLPVGLAAASSTQPESWTGAHIGAHGGYAFGSTKLTSGSWTGDGVGGAGGVGGALL 324
Query: 83 GYNVEDSCIMYGVEGD---------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLL 133
GY+ + + GVE D T+ + N + S+R R G + S L
Sbjct: 325 GYDYQWGRSVLGVEIDGSGGGARSTASVTLRRFSANAQIAYDWDYSIRARAG-RLFGSTL 383
Query: 134 LYATVGPDVAQKYETG---KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
L+ TVG T E + + G G GVE L+ L ARLEY S Y K
Sbjct: 384 LFGTVGWTQTYGRLTTAGLGGIETSHLFSGVQLGGGVET-MLTTHLGARLEYLHSFYDKY 442
Query: 191 EG 192
G
Sbjct: 443 AG 444
>gi|323139417|ref|ZP_08074467.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322395349|gb|EFX97900.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 304
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 49/177 (27%), Gaps = 43/177 (24%)
Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHS---- 112
A + G G + G GY + I+ GVE D++ + +
Sbjct: 79 AAAALGATGVLGASGNGGFIGGGQIGYTWQFHRNIVAGVEADIQGIASGVGGGSLTTTVP 138
Query: 113 -------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG---- 149
G++R R GY S +LLLY T G
Sbjct: 139 VMLPAAPFPSANTVMSASRSLDYLGTVRGRIGYLFSPTLLLYGTGGLAYGGVSLNVTGLQ 198
Query: 150 --------------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
+ +G +AG G+E + A+ EY V
Sbjct: 199 SFTLGTPGFITTGFGGSSFSDTRVGWSAGGGLE-WMFWPNWSAKAEYLYYDLGSVRT 254
>gi|310815861|ref|YP_003963825.1| putative outer-membrane immunogenic protein precursor
[Ketogulonicigenium vulgare Y25]
gi|308754596|gb|ADO42525.1| putative outer-membrane immunogenic protein precursor
[Ketogulonicigenium vulgare Y25]
Length = 220
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 79/208 (37%), Gaps = 41/208 (19%)
Query: 36 GVVPTIATNRYVP------IRHDFNGPYAG-------LSALYNGSFGEEAH--------- 73
G +P A ++VP F+G Y G S NG G++A
Sbjct: 16 GTLPMAAAAQHVPRIVVMTPSVGFSGGYVGFGLNRDSGSIDMNGETGDQAQQLLGTRSLG 75
Query: 74 --HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV-------LADNIHSLHGIGGSLRIRG 124
G ++ AGY+ ++GV G++ + ++D G + +R
Sbjct: 76 EPSGLGLNLRAGYDWRTGNTIFGVWGEIAQSWAKDDVVIPAVSDTWSVGFGTSTAAMLRL 135
Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
GY++ +++Y+ G +G + + G + GVG+E S + LE+
Sbjct: 136 GYDMGG-VMVYSNAGYRWTDVELETFSGAYSDRSGGISYGVGIETE-FSHHMSGYLEF-H 192
Query: 185 SKYSKV-------EGFYNTISLGVGMKF 205
KV + NT +LGV KF
Sbjct: 193 RNTGKVDIEGLTADLSLNTFTLGVNYKF 220
>gi|188584143|ref|YP_001927588.1| porin [Methylobacterium populi BJ001]
gi|179347641|gb|ACB83053.1| porin [Methylobacterium populi BJ001]
Length = 302
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 56/207 (27%), Gaps = 68/207 (32%)
Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---------------------- 71
R P + T + G YAG +A Y +
Sbjct: 24 PRRAAPPVFTPV---PVFTWTGFYAGFNAGYGFGVEDSLAPTQVVTIDRRVVGGPVGAIA 80
Query: 72 --------AHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIHS-------- 112
G GYN + S ++ G+E D +Y +
Sbjct: 81 GFAFDNGGRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYADLGGRFGRNGLCGTGGIA 140
Query: 113 ----------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150
G++R R GY D +L Y T G + G+
Sbjct: 141 CAVTPGAFVQPGVTLINPTGLQGLDFFGTVRGRIGYAF-DRVLFYGTGGFAYG-SFGGGR 198
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLV 177
A + G AG GVE ++S +
Sbjct: 199 AVDTDDFKTGYAAGGGVEYALPTDSFL 225
>gi|114809812|gb|ABI81409.1| bacteria phage-associated hemin-binding membrane protein Pap31
[Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 62/186 (33%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63
S +AL S +AQAAD V V P ++ P + G Y G
Sbjct: 2 SVIALISTSAAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56
Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112
N FG++ G I+AG N+E ++ GVE D + + +
Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDTKTLSTK 116
Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133
G+ R R G+ ++ ++
Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176
Query: 134 LYATVG 139
Y G
Sbjct: 177 PYVAGG 182
>gi|89054446|ref|YP_509897.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88863995|gb|ABD54872.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 207
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 16/153 (10%)
Query: 51 HDFNGPYAGLSALYNGSFGEEA-------HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103
+D++G Y G+ Y + A A +F GY + ++ G E D+
Sbjct: 44 YDWSGFYGGVQLEYGDVTADTAAGVEAATGDGALYGLFGGYRYDLGNVVVGAELDLNLAD 103
Query: 104 PVLADNIHSLHGIGGSLR---IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
L D + G S+ GY+ + LLY TVG A T G G
Sbjct: 104 IDLDDPTGATIGSLDSVHRLGAEVGYD-AGPALLYGTVGVAQA----TATLGAADLQDNG 158
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193
G G++ +++ + E ++ +G
Sbjct: 159 YFYGAGIDYL-VTDQITVGAEVLQHEFDDFDGT 190
>gi|296282661|ref|ZP_06860659.1| outer membrane protein-like [Citromicrobium bathyomarinum JL354]
Length = 222
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 42/201 (20%)
Query: 46 YVPIRHDFNGPYAGLSALYN---------GSFGEEAHHNAGGSIFA---GYNVEDSCIMY 93
V F+G + Y+ + +A G I+ GY+V+ I+
Sbjct: 23 QVDPDSPFSGFRIQGTTGYDQITAGSSVDDDGNDNNDQSAEGVIYGATIGYDVDLGNIVI 82
Query: 94 GVEGDVRYT--VPVLADNIHSLHGIGGS-------LRIRGGYEVSDSLLLYATVGPDVAQ 144
G E ++ + + G G + R G + + +++ YA G A+
Sbjct: 83 GPEAELTGSTADTDYENGDFEGFGFGNVSAGRDVYVGARIGVKANPNMMFYAKGGYTNAK 142
Query: 145 KYETGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------------ 188
G + G G G+E +++ +EYR S YS
Sbjct: 143 LNVRSNDGTTEFDTDYDLDGYRVGGGLEY-AFGKNMFTNIEYRYSNYSDANVDFNGTLPD 201
Query: 189 ----KVEGFYNTISLGVGMKF 205
V+ + +++G+G++F
Sbjct: 202 TDQFDVDTDRHQVTVGLGVRF 222
>gi|217971469|ref|YP_002356220.1| OmpA domain-containing protein transmembrane region-containing
protein [Shewanella baltica OS223]
gi|217496604|gb|ACK44797.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS223]
Length = 187
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
+D G Y G + G++ + G + GYN +G+E ++ T +
Sbjct: 24 NDTTGFYVGGALNKVTLDGDDVTDSRSGTGLGAYGGYNF---NEWFGLEANLFATGDLGN 80
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167
++ + G S + ++D +YA G ++ G T G GV
Sbjct: 81 KDVDASAG-ALSFTPKFTAHINDIFSVYAKAGVATMLVKFESNGQKLDFTGFGWTYGAGV 139
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISL 199
++E L R+ Y + K++ N++ L
Sbjct: 140 NA-AVTEHLNIRVSYDVTT-GKLDADNNSLGL 169
>gi|27379810|ref|NP_771339.1| outer-membrane protein [Bradyrhizobium japonicum USDA 110]
gi|27352963|dbj|BAC49964.1| blr4699 [Bradyrhizobium japonicum USDA 110]
Length = 259
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 60/205 (29%), Gaps = 38/205 (18%)
Query: 15 LASFCSAQAADPVRRAHHGGRGVVP-TIATNRYVPIRHDFNGPYAG--LSALYNGSFGEE 71
L A A A P T A V +D++G Y G +
Sbjct: 5 LIGAIGAVALSLSAPASAADLAARPYTKAPPPMVAAIYDWSGFYIGINGGGGSAHKCWDF 64
Query: 72 AHHNAGGSIFAG--------------YNVEDSCIMYGVEGDVRYTVPVLADNIH------ 111
G I G Y + + ++G+EG + DN+
Sbjct: 65 VTPVTGVLIGEGCHNATGGTVGGQVGYRWQSANWVFGLEGQGNWA-DFSGDNVSTTFIGT 123
Query: 112 -----SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKA---GEITPIAI 159
S G + GY +++L Y G V + Y+
Sbjct: 124 GLRDRSKINAFGLFTGQVGYAW-NNVLFYVKGGGAVVSDRYRGYDVITGLEFDRANETRW 182
Query: 160 GGTAGVGVEVGGLSESLVARLEYRA 184
GGT G G+E G + + +EY
Sbjct: 183 GGTVGAGLEF-GFAPNWTVGVEYDH 206
>gi|66934583|gb|AAY58302.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 62/186 (33%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63
S +AL S +AQAAD V V P ++ P + G Y G
Sbjct: 2 SVIALISTSTAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56
Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112
N FG++ G I+ G N+E ++ GVE D + + +
Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDTKTLSTK 116
Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133
G+ R R G+ ++ ++
Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGGDEKFVVGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176
Query: 134 LYATVG 139
Y G
Sbjct: 177 PYVAGG 182
>gi|209886818|ref|YP_002290675.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
gi|209875014|gb|ACI94810.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
Length = 660
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 72/229 (31%), Gaps = 75/229 (32%)
Query: 49 IRHDFNGPYAG-------------------LSALYNGSFGEEAHHNAGGS-------IFA 82
+D+NG YAG + +GSF + + G +
Sbjct: 5 ALYDWNGWYAGVHVGAIRGLSNWSAIPPGAGAPGLSGSFDLPFNFDFIGGTGNYVAGLQG 64
Query: 83 GYNVEDSC-IMYGVEGDVRY--TVPVLADNIHSLHGIG----------------GSLRIR 123
GYN M G E D+ + + + ++ + GS R R
Sbjct: 65 GYNHVFPSRAMLGFESDISFPNSDVQVPFSVRGSQTVSSPLTGQVTYGEAVIHYGSARAR 124
Query: 124 GGYEVSDSLLLYATVGPD-----VAQKYETGKAGEITPI----------AIGGTAGVGVE 168
GY D LLY T G V + G + +G AG G+E
Sbjct: 125 AGYAF-DHFLLYGTGGLAWSYDQVTRTQVDGVSVGGAATPGTVDTRLLWRLGWAAGAGIE 183
Query: 169 VGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMK 204
+ L+ + A+ EY A+ + + +I LG+ +
Sbjct: 184 IP-LAANWTAKAEYLATGFGHKGMRFTGASEAFNSDLTMQSIRLGLNYR 231
>gi|170741349|ref|YP_001770004.1| porin [Methylobacterium sp. 4-46]
gi|168195623|gb|ACA17570.1| porin [Methylobacterium sp. 4-46]
Length = 255
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 76/223 (34%), Gaps = 60/223 (26%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS--ALYN 65
LA+ + AQAAD RRA VPT + G Y G + L +
Sbjct: 5 AASGLLAVLAATGAQAADLPRRAAPPVVAPVPT----------FTWTGAYFGANVAGLVD 54
Query: 66 GSF---------GEEAHHNAGGSIFA---GYNVE---DSCIMYGVEGDVRYTVPV----- 105
G+F G + +AGG + GYN + ++ + G+EGD+ Y+
Sbjct: 55 GNFLLRSLAPLPGAASRPSAGGFVAGGTVGYNYQFAPENGFVAGLEGDIGYSGVRHTGII 114
Query: 106 ------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI----- 154
A+ ++R R GY +L+YAT G + G A
Sbjct: 115 AAAGLGTANGRLQTDTYHATIRGRIGYAW-GPVLVYATGGWAFTEFNAEGVAATQRFGLG 173
Query: 155 ---------------TPIAIGGTAGVGVEVGGLSESLVARLEY 182
+ G T G GV ++ + EY
Sbjct: 174 AGRPFVGAFAGPVRRSIPLDGYTVGGGV-AYKITPDWSLKAEY 215
>gi|212633150|ref|YP_002309675.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3]
gi|212554634|gb|ACJ27088.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3]
Length = 184
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 14/161 (8%)
Query: 55 GPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113
G YAG ++ + + GYN +G+EG + T + + +
Sbjct: 28 GAYAGGQIGAFSADLEGGSESGQSYGAYGGYNF---NEWFGLEGALYLTNDFIDEGEATA 84
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+ + S + + ++D+ LY VG A +I +G T G GV ++
Sbjct: 85 NALSFSAAPKFTWVINDTFSLYGKVGIASAAIVIESALPDIDYTGVGLTYGAGVNA-AIT 143
Query: 174 ESLVARLEYRAS---------KYSKVEGFYNTISLGVGMKF 205
E L RL Y + ++ ++LG+ +F
Sbjct: 144 EKLTVRLGYDFMSATLESDDFDLPDADVEFSNVTLGMHYQF 184
>gi|46251212|gb|AAS84577.1| truncated Omp25b [Brucella canis]
Length = 120
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDS-CI 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90
Query: 92 MYGVEGDVRYTV 103
+ GV+GD+ Y
Sbjct: 91 VLGVDGDITYND 102
>gi|310816897|ref|YP_003964861.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308755632|gb|ADO43561.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 237
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 56/186 (30%), Gaps = 28/186 (15%)
Query: 40 TIATNRYVPIR--HDFNGPYAGLSALY------------------NGSFGEEAHHNAGGS 79
V + F G Y GL + G G+
Sbjct: 33 EAPVVIPVAPVLTNRFAGGYVGLGYGHVVSSDDRVGMVDQTTNLLTGVLGDLDLEGGAAI 92
Query: 80 IFAGYNVEDSCIMYG----VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
+ AGY + ++YG V G S +LR GY V+ SLLLY
Sbjct: 93 LQAGYRWANGNLVYGPTLRVRGGGIDAELTGTSTGSSTVNWEAALRGNLGYTVTPSLLLY 152
Query: 136 ATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
VG A+ T G AG+G E L+++ EY + Y
Sbjct: 153 GFVGYTYAEVEYDVAGAINVAETVNFGGVNAGLGAEY-ALNDNWSLFGEYEYAGYEGKNL 211
Query: 193 FYNTIS 198
I+
Sbjct: 212 VDPAIN 217
>gi|254693693|ref|ZP_05155521.1| porin [Brucella abortus bv. 3 str. Tulya]
Length = 81
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 16/74 (21%)
Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------------- 191
+ G AG GV+ +++++ RLEYR + Y +
Sbjct: 9 IESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNK 67
Query: 192 GFYNTISLGVGMKF 205
+ I LGV KF
Sbjct: 68 FKTHDIRLGVAYKF 81
>gi|161347191|gb|ABX65299.1| 31 kDa bacteriophage-associated heme binding protein [Bartonella
vinsonii subsp. berkhoffii]
Length = 182
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 62/186 (33%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63
S +AL S +AQAAD V V P ++ P + G Y G
Sbjct: 2 SVIALISTSTAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVK 56
Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112
N FG++ G I+ G N+E ++ GVE D + + +
Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDTKTLSTK 116
Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133
G+ R R G+ ++ ++
Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176
Query: 134 LYATVG 139
Y G
Sbjct: 177 PYFAGG 182
>gi|126735153|ref|ZP_01750899.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2]
gi|126715708|gb|EBA12573.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2]
Length = 230
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 60/190 (31%), Gaps = 32/190 (16%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSA--------LYNGSFGEEAHHNAGG--------SI 80
V+ T D++G Y G + ++ + G
Sbjct: 15 VIAASPTALVADQPFDWSGTYGGFNLDLADPILSGIQDCCADDPGDDPGNLDPSAVALGG 74
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLAD-------NIHSLHGIG--GSLRIRGGYEVSDS 131
G+N+ + +YGVEG Y V + S I GSLR R G D+
Sbjct: 75 HFGFNIVQNQWVYGVEGAFFYGGLVDSQLSQSEPIANESDIDINGIGSLRGRIGRIAGDA 134
Query: 132 LLL------YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
++ YA + G G G G+++ L+E+ AR+ Y
Sbjct: 135 MVFGILGASYADATYTMRDPDAANSKGSADLSGWGYMIGAGIDLP-LTENTSARVSYERH 193
Query: 186 KYSKVEGFYN 195
+ +
Sbjct: 194 IFDTRVATDD 203
>gi|220922032|ref|YP_002497333.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946638|gb|ACL57030.1| porin [Methylobacterium nodulans ORS 2060]
Length = 294
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 49/183 (26%), Gaps = 57/183 (31%)
Query: 51 HDFNGPYAGLSALYN-----------------------------GSFGEEAHHNAGGSIF 81
+ G YAG + Y G G
Sbjct: 40 FTWTGFYAGFNVGYGFDASDNRGPTVIGVGPATGLVPPGATAVIAFTGNRNLEGFVGGGQ 99
Query: 82 AGYNVED---SCIMYGVEGDVRYTV-----------------------PVLADNIHSLHG 115
GYN + S ++ G+E D ++ V N +
Sbjct: 100 VGYNYQFTPGSGVVVGIEADAQFADFGRDRNRFIVATNPAALGGVAAQQVFNPNGLAGLD 159
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSE 174
G++R R GY D +L Y T G G TAG G+E ++
Sbjct: 160 WFGTVRGRLGYAF-DRVLFYGTGGFAYGGGGGRDFGLPNRDDFQTGWTAGGGIEYALPTD 218
Query: 175 SLV 177
S +
Sbjct: 219 SFL 221
>gi|51320045|gb|AAU00343.1| Pap31 [Bartonella phage CO-04-1]
Length = 186
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 54/184 (29%), Gaps = 62/184 (33%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--------- 63
+AL S +AQAAD V V P ++ P + G Y G
Sbjct: 2 IALISTSAAQAADIVIPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVEIT 56
Query: 64 ----YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS--- 112
N FG++ G I+AG N+E ++ GVE D + + +
Sbjct: 57 DSGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDTKTLSTKEL 116
Query: 113 -------------------------------------LHGIGGSLRIRGGYEVSDSLLLY 135
G+ R R G+ ++ ++ Y
Sbjct: 117 EGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIMPY 176
Query: 136 ATVG 139
G
Sbjct: 177 FAGG 180
>gi|92116695|ref|YP_576424.1| hypothetical protein Nham_1117 [Nitrobacter hamburgensis X14]
gi|91799589|gb|ABE61964.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 274
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 96/286 (33%), Gaps = 93/286 (32%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L LA ++ + A AAD G ++ + +R + G Y G
Sbjct: 1 MRRLLLA----AVMCGTAHGAYAADMPDLPILRGSL------SDGFGTVRTVWQGYYVGG 50
Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88
A S G+ + G F GYN +
Sbjct: 51 QAGVGESDMNFTGATRNVAARLLSGTAIENSGQVSSWPLGGKASVRGDGWGGFVGYNSQW 110
Query: 89 SCIMYGVEGD---------------------VRYTVPVLADNIHSLHGIG-GSLRIRGGY 126
++ GVE + + YT V + ++ G+LR R GY
Sbjct: 111 DDVVIGVEANYMHGKFGGSRSDSMSRFFTDSLGYTDGVTYQSTATMSISDMGTLRARAGY 170
Query: 127 EVSDSLLLYATVGPDVAQKY--------------------------ETGKAGEITPIAIG 160
V + L Y G + Q +G G+ + + G
Sbjct: 171 -VVGAFLPYMFGGVALGQADIVRSAHIFGTQVNPAAAPGFTNVPFNVSGTDGKYSHLIYG 229
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKY-SKVEGFYNTISLGVGMKF 205
+AGVG++V L L AR+E+ ++ S ++ NT+ GVG KF
Sbjct: 230 YSAGVGLDVN-LIGGLFARVEWEYIRFTSSIDTNVNTVRAGVGYKF 274
>gi|260574728|ref|ZP_05842731.1| putative outer membrane protein [Rhodobacter sp. SW2]
gi|259023145|gb|EEW26438.1| putative outer membrane protein [Rhodobacter sp. SW2]
Length = 213
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 71/204 (34%), Gaps = 28/204 (13%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--------YNGSFGE 70
+AQA PV A V T+ D++G YAGL N
Sbjct: 21 TAAQAGGPVVVAEEPQLAYVQTVQQ-----PTADWSGFYAGLGYGVSSGDIDFTNPDVAN 75
Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130
+ S F GY V+ ++YG E L+ + GY ++
Sbjct: 76 KLDDGHAASAFVGYLVQRDALVYGAELAYTGLDKNTVTGFADEIDQTIDLKGKVGYA-AN 134
Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY--- 187
L Y +G VA G P + G+G++ +++ + LEY A
Sbjct: 135 RALFYGVLGYSVA--SFDTAGGSWDPAGVNY--GLGMDYL-VTDRMTVGLEYLARDLTGD 189
Query: 188 ------SKVEGFYNTISLGVGMKF 205
+ + +T+SL VG +F
Sbjct: 190 NPDGLGQQAKIDLDTVSLRVGFQF 213
>gi|296447763|ref|ZP_06889678.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
gi|296254740|gb|EFH01852.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
Length = 723
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 66/228 (28%), Gaps = 76/228 (33%)
Query: 48 PIRHDFNGPYAGLSAL-----YNGSFGEEAHH-------------NAGGSIFA---GYNV 86
P + G + G+ A +G E A + G F GY+
Sbjct: 26 PPIFSWAGLHLGVDAGVGLPVASGGRVEAAAGLSPTAHALIAPGRDRAGVSFGARIGYDW 85
Query: 87 EDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGG----------------SLRIRGGYEVS 129
+ +YG+E ++ + + D + + G G S+R R GY
Sbjct: 86 QKGPWVYGLESELNFLDLRRGDDGVFAGFGALGAATRRLTTQENGQYVASVRGRLGYAFG 145
Query: 130 DSL----------------LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+L LL T G A + G GVE L
Sbjct: 146 RTLVYAAAGVAAGGWRGASLLTVTPGVAGP-----FFAPVSDSSRMKFVIGAGVE-QALF 199
Query: 174 ESLVARLEYRA----------SKYSKV------EGFYNTISLGVGMKF 205
+ ARLEY YS + + LG+ +F
Sbjct: 200 DRWSARLEYTYVNQQLQIRHFDDYSSSAFDVRQRSEAHLLRLGLDYRF 247
>gi|255262225|ref|ZP_05341567.1| outer membrane protein [Thalassiobium sp. R2A62]
gi|255104560|gb|EET47234.1| outer membrane protein [Thalassiobium sp. R2A62]
Length = 194
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 21/187 (11%)
Query: 27 VRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL-----SALYNGSFGEEAHHNAGGSI- 80
+ + VP +A+ D+ G YAGL + + GSI
Sbjct: 2 AQAGNLEEVIDVPPVASIVTPAEVSDWTGFYAGLQFDAVAGKTERDSLSSFKADLEGSIV 61
Query: 81 --FAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG------IGGSLRIRGGYEVSDSL 132
F GY + G E D+ G I +LR G +
Sbjct: 62 SGFVGYRWAVGRYIVGAELDIALNGDGRMIYTEGGLGPERPYDINSALRFGGEFGGELGG 121
Query: 133 LL-YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
L Y +G + + + G G+G + +++S++ +E + +++
Sbjct: 122 GLAYMGLGFTMLDVKLDSEFDDQ-----GYYVGIGYDY-FVTDSIMVGVEINYHDFGELD 175
Query: 192 GFYNTIS 198
G + ++
Sbjct: 176 GASDRVT 182
>gi|188580104|ref|YP_001923549.1| porin [Methylobacterium populi BJ001]
gi|179343602|gb|ACB79014.1| porin [Methylobacterium populi BJ001]
Length = 254
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 54/171 (31%), Gaps = 34/171 (19%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--------------GYNVE---DSCIMY 93
+ G Y G +A Y G + +A GYN + S +
Sbjct: 50 FTWTGFYVGANAGYGFRGGSSRYSDATYGTVTESGGKGGFVGGGQIGYNYQITPGSGWVL 109
Query: 94 GVEGDVRYTVPVLAD----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
G E D++ T + G+LR R GY D L+Y T G
Sbjct: 110 GAEADLQATGFGRRGDGTVGATPYYGVAPSLDWYGTLRGRVGYAF-DRWLVYGTGGFAYG 168
Query: 144 QKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ A +G AG G+E L++ + ++E K
Sbjct: 169 GGSRSPYASAYPYTLPDTTRLGYAAGAGIEY-ALTDHVSVKVEGLYVDLGK 218
>gi|87199324|ref|YP_496581.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM
12444]
gi|87135005|gb|ABD25747.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM
12444]
Length = 185
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 54 NGPYAGLSALYN--GSFGEEAH---HNAGGSIFAGYNVEDSCIMY-GVEGDVRYTVPVLA 107
G Y G+ ++ S G++ + GG++FAGYN + + +Y GVE + +
Sbjct: 24 AGAYVGVGVTHDNLASSGDDEGVGINGVGGTVFAGYNFDLTSSVYAGVEANFDLATAKIG 83
Query: 108 DN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
D+ + + + GGS G+ SDS LY VG + T E + A G G
Sbjct: 84 DDTDSLEADYAFGGS--ALLGFRPSDSTALYGRVGYQRGRGTLTVDGTEYSDSADGLRLG 141
Query: 165 VGVEVGGLSESLVARLEYRASKY 187
+G++ L+E L R+EY + Y
Sbjct: 142 LGLQAD-LTEKLGVRVEYNHTHY 163
>gi|146338464|ref|YP_001203512.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278]
gi|146191270|emb|CAL75275.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278]
Length = 549
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 13/135 (9%)
Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG------SLRIR 123
+ G + G + + + G++ ++ + + + +R
Sbjct: 376 SSNGSDVVGGLQLGCDYQLDRFVVGIQAMADLGNINVSGPLAPGLTLNTRTSNLYTATVR 435
Query: 124 GGYEVSDSLLLYATVGPDVAQ---KYETGKAGEITPIAI---GGTAGVGVEVGGLSESLV 177
GY V+ +L Y G + G+ +A G T G GVE + +
Sbjct: 436 AGYLVTPEILAYVRGGAAWTRTTVGVANTATGQSASVAFNRSGWTVGAGVE-WMFARNWS 494
Query: 178 ARLEYRASKYSKVEG 192
A EY + + G
Sbjct: 495 AFAEYDYADFGTATG 509
>gi|113968601|ref|YP_732394.1| OmpA domain-containing protein [Shewanella sp. MR-4]
gi|114049252|ref|YP_739802.1| OmpA domain-containing protein [Shewanella sp. MR-7]
gi|113883285|gb|ABI37337.1| OmpA domain protein transmembrane region-containing protein
[Shewanella sp. MR-4]
gi|113890694|gb|ABI44745.1| OmpA domain protein transmembrane region-containing protein
[Shewanella sp. MR-7]
Length = 185
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 17/177 (9%)
Query: 41 IATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
D G Y G + +++ G ++ GYN +G+E +
Sbjct: 14 ALVAGQASAATDNTGFYVGGALNRVTVDAFDDSETGTGFGVYGGYNF---NEWFGLEANF 70
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
T + ++ G + + +++D YA VG G +
Sbjct: 71 FATADLGDSDVDISAG-ALTFTPKFTLQINDMFSAYAKVGVASMAVNVDGLGFDEDFTGF 129
Query: 160 GGTAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205
G T GVGV ++E L RL Y ++ +++GV +F
Sbjct: 130 GWTYGVGVNA-AVTEHLNVRLSYDITTGDLDADHSYLNMKDIDTDMKQLAIGVHYQF 185
>gi|126734487|ref|ZP_01750234.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126717353|gb|EBA14217.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 175
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 17/163 (10%)
Query: 50 RHDFNGPYAGLSALYNG----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105
D+ GPYAG + E IFAGYNV++ I+YG E D T
Sbjct: 21 AQDWTGPYAGFQIGGSDIDVDGAAELTGDGPSYGIFAGYNVQNGAIVYGGEIDYDVTEYE 80
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+A L+ R G E+ L Y T G A + G+ G GV
Sbjct: 81 IAGGAQ-EVDSTTRLKGRIGTELGGG-LAYGTAGVVWA---TSPGLGDD----NGYLVGV 131
Query: 166 GVEVGGLSESLVARLE---YRASKYSKVEGFYNTISLGVGMKF 205
G ++ +++++ E + Y+ + + + F
Sbjct: 132 GYDLP-VTQNMTVGAEILQHEFEDYNDTDLDVGVTTFKARVSF 173
>gi|218532663|ref|YP_002423479.1| porin [Methylobacterium chloromethanicum CM4]
gi|218524966|gb|ACK85551.1| porin [Methylobacterium chloromethanicum CM4]
Length = 243
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 52/172 (30%), Gaps = 34/172 (19%)
Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHNAGGSI--------------FAGYNVE---DSCIM 92
+ G Y G +A Y ++ +A GYN + S +
Sbjct: 38 VFTWTGFYVGANAGYGFRGSSSSYTDATYGTVIESGGKGGFVGGGQIGYNYQLTSGSGWV 97
Query: 93 YGVEGDV-RYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
G E D T D + G++R R GY D L+Y T G
Sbjct: 98 LGAEADFQGMTFGRRGDGTIGTTPYHGVAPSLDWFGTVRGRLGYAF-DRWLVYGTGGFAY 156
Query: 143 AQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ A +G G GVE L+E + ++E K
Sbjct: 157 GGGSASPYATSYPYTLPDTTRLGYAVGGGVEY-ALTEHISVKVEGLYVDLGK 207
>gi|85715495|ref|ZP_01046476.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A]
gi|85697690|gb|EAQ35566.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A]
Length = 257
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 55/188 (29%), Gaps = 34/188 (18%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSF--------------GEEAHHNAGG--SIF 81
T A + +D++G Y G + + S E H GG
Sbjct: 30 TYTKAPPPMMAAIYDWSGFYIGANGGWGSSRNCWNFTTPAGAFVANEGCHDATGGTAGGQ 89
Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSLL 133
GY + + ++G+E + S G G + GY D+ L
Sbjct: 90 IGYRWQSTNWVFGLEAQGNWADLSGRRASLAFPAFTNDSHLGAFGLFTGQIGYAW-DATL 148
Query: 134 LYATVGPDVAQKYETGKA--------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
LY G V A ++ G T GVG+E G + + EY
Sbjct: 149 LYVKGGAAVTSNRYRSLATLTGAQVTNDVNNSRWGATVGVGLEY-GFAPNWSLAFEYDHI 207
Query: 186 KYSKVEGF 193
Sbjct: 208 FMGNSRTT 215
>gi|170747711|ref|YP_001753971.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654233|gb|ACB23288.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 48/183 (26%), Gaps = 59/183 (32%)
Query: 53 FNGPYAGLSALYNGS----------------------------FGEEAHHNAGGSIFAGY 84
+ G Y G++A Y + G GY
Sbjct: 41 WTGFYVGVNAGYGFDANSRNTTSYALPGGSLINSPGTAGVVSVSNRNNNDGFSGGAQIGY 100
Query: 85 NVED---SCIMYGVEGDVRY------------------------TVPVLADNIHSLHGIG 117
N + S ++ G E D +Y P +
Sbjct: 101 NYQFTPGSGVVIGFEADAQYVDFARRANATQNYSFLGFPGVAFSNPPAFVATSGNGLDYF 160
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI---TPIAIGGTAGVGVEVGGLSE 174
G++R R GY D L+Y T G + G AG GVE ++
Sbjct: 161 GTVRGRLGYAF-DRTLVYGTGGFAYGSGQDDQNFAGNRFRDSFRTGWAAGGGVEYALPTD 219
Query: 175 SLV 177
S +
Sbjct: 220 SFL 222
>gi|66934588|gb|AAY58303.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 62/186 (33%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63
S +AL S +AQAAD V V P ++ P + G Y G
Sbjct: 2 SVIALISTSAAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56
Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112
N FG++ G ++ G N++ ++ GVE D + + +
Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGVYTGSNIDLGNNLILGVETDAVWADRGDTKTLSTK 116
Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133
G+ R R G+ ++ ++
Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176
Query: 134 LYATVG 139
Y G
Sbjct: 177 PYVAGG 182
>gi|170747433|ref|YP_001753693.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170653955|gb|ACB23010.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 41/138 (29%), Gaps = 31/138 (22%)
Query: 70 EEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIHSLHGIGGS------- 119
+ G GYN + S ++ G E D +Y N + GG+
Sbjct: 86 RSNNDGFSGGAQIGYNYQFTPGSGVVIGFEADAQYVDFARRANATQNYAFGGAPGIAFAA 145
Query: 120 -----------------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI---TPIAI 159
+R R GY D L+Y T G +
Sbjct: 146 PRAFVATSGNGLDYFGTVRGRLGYAF-DRTLVYGTGGFAYGSGQDDQNFAGNRFRDSFRT 204
Query: 160 GGTAGVGVEVGGLSESLV 177
G AG G+E ++S +
Sbjct: 205 GWAAGGGIEYALPTDSFL 222
>gi|70931144|gb|AAZ15807.1| heme-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 54/186 (29%), Gaps = 62/186 (33%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63
S +AL S +AQAAD V V P ++ P + G Y G
Sbjct: 2 SVIALISTSTAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56
Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112
N FG++ G I+ G N+E +M GVE D + + +
Sbjct: 57 IADSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLMLGVETDAVWADRGDTKTLSTK 116
Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133
G+ R R G+ ++ ++
Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGGDEKFVVGDTGSYSFTYKEKWSGATRARTGFAAANCIM 176
Query: 134 LYATVG 139
Y G
Sbjct: 177 PYVAGG 182
>gi|24375951|ref|NP_719994.1| outer membrane protein, putative [Shewanella oneidensis MR-1]
gi|24350939|gb|AAN57438.1|AE015879_8 outer membrane protein, putative [Shewanella oneidensis MR-1]
Length = 188
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 7/157 (4%)
Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
D G Y G + ++A G ++ GYN +G+E ++
Sbjct: 16 VAGQALAATDTTGFYVGGALNRVTVDVLDDAETGTGFGVYGGYNF---NEWFGLEANLFA 72
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161
T + ++ G + + +++D YA VG G + G
Sbjct: 73 TGDLGDKDVDISAG-ALTFTPKFTLQINDMFSAYAKVGVASMAMNVDGDGFDEDFTGFGW 131
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTIS 198
T GVGV ++E L RL Y + ++ ++ ++
Sbjct: 132 TYGVGVNA-AVTERLNVRLSYDVTS-GDLDADHHYVN 166
>gi|21106560|gb|AAM35363.1| membrane protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 474
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 33/173 (19%)
Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
G G +A + + GG+ + GY+ + +YGV + YT + D++
Sbjct: 272 GFCGGAAAG--RTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAE--YTRNDVRDSVS 327
Query: 112 S------------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETG 149
+ +LR R GY L Y T G +
Sbjct: 328 AFSTTPAFYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANS 387
Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
A G AG+G++ LS+ + +EY ++ + + +G G
Sbjct: 388 FTSSGGDSADGYQAGIGLQ-RRLSDKVSVGVEYLFTRLQDDDT---RVRVGPG 436
>gi|12620578|gb|AAG60854.1|AF322012_159 ID352 [Bradyrhizobium japonicum]
Length = 620
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 55/227 (24%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L +G +++A+A+ ++ A + GR +P P +++G Y G
Sbjct: 57 MRSRVLFLGAATMAIATTGTSMA--------NLGREALP--------PSVWNWSGGYIGG 100
Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVEDSCIMYGVEGD--------- 98
+ + GYN +++ +YG+E D
Sbjct: 101 HVGGGYGRTSFTNPFGPPIYGDVVDIPSFVAGGQIGYNWQNNSWVYGLELDASAAVASGS 160
Query: 99 ---VRYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSLLLYATVGPD----VAQKYETG 149
+ + +++ N ++ + + R GY L Y G
Sbjct: 161 NTCLAASDLIVSANCNAAPNLFATGTGRIGYAFGSLGQTLAYLKAGAAWQNNRGDIVNNF 220
Query: 150 KAGE--ITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ G+ +GG G+GVE L+ S +EY +
Sbjct: 221 EGGDLPQEKTHFDYGQVGGVIGLGVE-QALTPSWSVNVEYDYLHFGG 266
>gi|170745396|ref|YP_001766853.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
gi|170658997|gb|ACB28051.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
Length = 577
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 61/222 (27%), Gaps = 63/222 (28%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH------------------------ 74
P N VP + G YAGL Y GS
Sbjct: 25 PIARLNYPVPPIFSWTGAYAGLFTGY-GSLDSNTKFICTAPGRQAGAPECPILPSRRASD 83
Query: 75 -NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHG-IGGSL----------- 120
+ G GYN + ++ G D ++T + GS+
Sbjct: 84 ASFIGGGEVGYNWQTPSGLVAGAAADYQFTRLWGYGRQEGDFKTVDGSVFFDSVAHSGQR 143
Query: 121 -------RIRGGYEVSDSLLLYATVGPDVAQKYETG---------------KAGEITPIA 158
R + G+ V D +Y T G V G +
Sbjct: 144 LDDLATFRGKIGFSV-DQTFIYVTGGLAVGHVRIDNNLNLSIKPDAAPAAAFDGRGGAVR 202
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
+G AG+G+E SE L A++E + S G
Sbjct: 203 LGYVAGMGIE-HAFSERLSAKVEGLYYNLGSRAVVPDQTSGG 243
>gi|46251216|gb|AAS84579.1| truncated Omp25b [Brucella pinnipedialis]
Length = 102
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDS-CI 91
V +NG Y G Y + + G ++AGYN +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90
Query: 92 MYGVEGDVRYTV 103
+ GV+GD+ Y
Sbjct: 91 VLGVDGDITYND 102
>gi|149184388|ref|ZP_01862706.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
gi|148831708|gb|EDL50141.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
Length = 200
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 30/165 (18%)
Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI---------HSLHGIGGSL 120
+++ + AGY+ + ++ G+E + + ++ + G L
Sbjct: 37 DQSIDGLAYGVGAGYDFDAGGVVLGLEAEYVGSTAETEYDMGDFEDIGVGNVETGRDLYL 96
Query: 121 RIRGGYEVSDSLLLYATVGPD-VAQKYETGKAGEITPIAI---GGTAGVGVEVGGLSESL 176
R G + +D LL+YA G + + + G G G+E LS +
Sbjct: 97 GARVGVKANDDLLVYAKGGYTNATYNFRNNDGTNEYEVDLDTDGFRVGGGLEY-ALSGNT 155
Query: 177 VARLEYRASKYS----------------KVEGFYNTISLGVGMKF 205
A++EYR S YS ++ + + G GM+F
Sbjct: 156 FAKVEYRYSNYSDAELDFEGDAPDVAVPDIDLDRHQVMAGFGMRF 200
>gi|100913602|gb|ABF69692.1| Pap31 hemin-binding protein [Bartonella henselae]
Length = 181
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 52/189 (27%), Gaps = 69/189 (36%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
S +AL S +AQAAD + V +A + G Y G S E
Sbjct: 2 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVGNFSSKVE 52
Query: 71 EAH----------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTV---------- 103
G I+AG N++ ++ GVE D +
Sbjct: 53 ITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAE 112
Query: 104 ---------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130
D++ G+ R+R G+ +D
Sbjct: 113 AIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAAD 172
Query: 131 SLLLYATVG 139
++ Y G
Sbjct: 173 RIMPYVAGG 181
>gi|146341078|ref|YP_001206126.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193884|emb|CAL77901.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
Length = 259
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 67/226 (29%), Gaps = 44/226 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG- 59
M+ LF A A+ + AAD + T A + +D+ G Y G
Sbjct: 2 MKTLFGAAAGLGAMAAATST-FAADLP------VKKGPYTKAPPAVMATVYDWGGFYVGF 54
Query: 60 -LSALYNGSFGEEAHH------------------NAGGSIFAGYNVEDSCIMYGVEGDVR 100
+ + A GY + + ++GVE
Sbjct: 55 NAGGGSSRDCWNLVSNAGVAVNPAANREGCSGGGGAAVGGQIGYRYQMANWVFGVEAQGD 114
Query: 101 YTVPVLADNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATVGPD-VAQKYETGKA 151
+ + L + R + GY D++L+Y G V +Y+T
Sbjct: 115 WANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAF-DNILVYFKGGAAVVGDRYDTFTT 173
Query: 152 GEI------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
G GGT G G+E G + + +EY
Sbjct: 174 GTNVMLDRANTTRWGGTVGAGLEY-GFAPNWSVGIEYDHIFLGNKN 218
>gi|212633149|ref|YP_002309674.1| outer membrane protein [Shewanella piezotolerans WP3]
gi|212554633|gb|ACJ27087.1| Outer membrane protein, putative [Shewanella piezotolerans WP3]
Length = 184
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 14/173 (8%)
Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
+ Y D G Y G ++ ++ + GYN +G+EG +
Sbjct: 16 ASAYASAETDRVGAYVGGQIGAFSADVEGDSESGQSYGAYGGYNF---NEWFGLEGTIYL 72
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161
T + + S++ S+ + ++D+ LY +G ++ G
Sbjct: 73 TNDFVDNEYASVNAASFSVAPKFTLVLNDTFSLYGKIGLASVAVVTDTFIRDVDYQGFGL 132
Query: 162 TAGVGVEVGGLSESLVARLEYRAS-------KYS--KVEGFYNTISLGVGMKF 205
T G GV +++ L RL Y + + ++ + ++LG+ +F
Sbjct: 133 TVGAGVNA-AVTDKLNIRLGYDFTSAELDSDDFGAQDIDMDLSNVTLGMHYQF 184
>gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12]
gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12]
Length = 335
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 24/179 (13%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
D + Y G + + +++ FAGY + + D
Sbjct: 11 EASKVQDDSFFYLGAKGGWINYQNACEAQAVDCDANDSAWGGFAGYQFHRNWAVETGYND 70
Query: 99 VRYTVPV------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152
V L + I ++ G SL+ ++++L L+ G +G
Sbjct: 71 FGQAGAVYPESGLLNEYIGTMKGWEFSLKGNL--PLTENLDLFGKAGTLRWDGENSGPFS 128
Query: 153 EITPIAIGGT--AGVGVEVGGLSESLVARLEYRASKYSKVE----GFYNTISLGVGMKF 205
+ G + G+G+E L+ S VAR+EY+ + + SLG+ +F
Sbjct: 129 YDSD--DGWSPMVGIGLEY-KLTPSWVARVEYQYFDSVGSDKLGGSNMHFTSLGLSYRF 184
>gi|170745394|ref|YP_001766851.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170658995|gb|ACB28049.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 49/183 (26%), Gaps = 59/183 (32%)
Query: 53 FNGPYAGLSALYNGSFG----------------------------EEAHHNAGGSIFAGY 84
+ G Y G++A Y +++ G GY
Sbjct: 41 WTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVVSVNNRSSNNGFSGGAQIGY 100
Query: 85 NVE---DSCIMYGVEGDVRYTVPVLADN------------------------IHSLHGIG 117
N + S I+ G E D +Y N +
Sbjct: 101 NWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLAGTPGFAFSAPRAYVATSGNGLDYF 160
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ R R GY D L+Y T G + + G G G+E ++
Sbjct: 161 GTARGRLGYAF-DRTLVYGTGGYAYGSGQDDQNFAGRNFRSSFRNGYAVGGGIEYALPTD 219
Query: 175 SLV 177
S +
Sbjct: 220 SFL 222
>gi|27376983|ref|NP_768512.1| hypothetical protein bll1872 [Bradyrhizobium japonicum USDA 110]
gi|27350125|dbj|BAC47137.1| bll1872 [Bradyrhizobium japonicum USDA 110]
Length = 602
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 55/227 (24%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L +G +++A+A+ ++ A + GR +P P +++G Y G
Sbjct: 39 MRSRVLFLGAATMAIATTGTSMA--------NLGREALP--------PSVWNWSGGYIGG 82
Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVEDSCIMYGVEGD--------- 98
+ + GYN +++ +YG+E D
Sbjct: 83 HVGGGYGRTSFTNPFGPPIYGDVVDIPSFVAGGQIGYNWQNNSWVYGLELDASAAVASGS 142
Query: 99 ---VRYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSLLLYATVGPD----VAQKYETG 149
+ + +++ N ++ + + R GY L Y G
Sbjct: 143 NTCLAASDLIVSANCNAAPNLFATGTGRIGYAFGSLGQTLAYLKAGAAWQNNRGDIVNNF 202
Query: 150 KAGE--ITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ G+ +GG G+GVE L+ S +EY +
Sbjct: 203 EGGDLPQEKTHFDYGQVGGVIGLGVE-QALTPSWSVNVEYDYLHFGG 248
>gi|94495792|ref|ZP_01302371.1| outer membrane protein-like [Sphingomonas sp. SKA58]
gi|94424484|gb|EAT09506.1| outer membrane protein-like [Sphingomonas sp. SKA58]
Length = 169
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH 111
F GP AG++ Y+ GE+ + AGY++ I+ GVE + V +
Sbjct: 27 FTGPRAGVTMGYDKIGGED---GFAYGVTAGYDLALAPRIVGGVEVSLG-DTTVDDSGLD 82
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
I SLR GY V+ +L + VG + G + + G G+E
Sbjct: 83 VSRDIAASLRA--GYVVTPRVLAFGKVGYASTRFEFDGDGAGLEGVRYG----GGLEFAA 136
Query: 172 LSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ + EY+ ++Y + G + +GVG +F
Sbjct: 137 -TPNTYISAEYQRTEYEQNVGGRDAAMVGVGFRF 169
>gi|294677984|ref|YP_003578599.1| hypothetical protein RCAP_rcc02462 [Rhodobacter capsulatus SB 1003]
gi|294476804|gb|ADE86192.1| membrane protein, putative [Rhodobacter capsulatus SB 1003]
Length = 209
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 78/222 (35%), Gaps = 30/222 (13%)
Query: 1 MQKLFLA-VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59
M+KL +A V ++SLA + V PT+A ++G YAG
Sbjct: 1 MKKLSVAIVAMASLAAPALAGGLTPPVVESE--------PTVAATPAPAPVQAWDGFYAG 52
Query: 60 LSALYNGSFGEEAHHNAGG--------SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
++ G +F GYN++ ++YG E + T L D
Sbjct: 53 ITGGSVTGGGASYAPGGAAFGMGRGSYGVFGGYNLQSGALVYGGEIAAQATDFNL-DGAP 111
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
L+ R G L YA VG G+ A G G+GV+
Sbjct: 112 GKFDNMIDLKARAGMAY-GKALPYAFVGYSRGDWK--NGDGQTNGAADGMNYGLGVDY-A 167
Query: 172 LSESLVARLEYR----ASKYS----KVEGFYNTISLGVGMKF 205
+++ E ++ + V+ +NT+ + G +F
Sbjct: 168 VNDKWSVGAELMRRELSTDFDGSARSVDTNFNTVQVRAGFRF 209
>gi|85704834|ref|ZP_01035935.1| possible outer membrane protein [Roseovarius sp. 217]
gi|85670652|gb|EAQ25512.1| possible outer membrane protein [Roseovarius sp. 217]
Length = 209
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 20/179 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--------D 52
M+ L + ++LA+A+ +A+ + P + + +
Sbjct: 1 MRPLLPLLATTTLAVAAPATAETPPTAFQQPVLITFDAPNDTPTASLSTQSRPTLSSSAN 60
Query: 53 FNGPYAGLSALYNGSFGEEAHHN--AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
+ G Y G + + ++ G + GY+ + + G D +
Sbjct: 61 WTGFYIGGQLGVGVVDSDISSNDEDFIGGVTFGYDHDFGRWVLGGALDYDFADINAGPGT 120
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
+++RGG ++ + LLY G +T AG G G G E
Sbjct: 121 SIEEIFR--VKLRGGPKIGNG-LLYGAAGWA---NADTDTAGRDD----GWFIGAGYEY 169
>gi|209885401|ref|YP_002289258.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209873597|gb|ACI93393.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 225
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 46/165 (27%)
Query: 68 FGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHS-----------LHG 115
+ H A G GYN + + G+EGD + + +
Sbjct: 23 WPTGTHSGALGGFQIGYNYQVRPDWVIGLEGDFQLADIGGSGSTSHIVPGVATSASQTVR 82
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPD-----------------VAQKYETGK-------- 150
G++R R G+ +++LL+YAT G + ++
Sbjct: 83 SFGTIRARLGHVAAENLLVYATGGFAFAKINSSARFDVEPGTSGSGIFDINGVRYTSLCG 142
Query: 151 --------AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
AG +A G T G G E L + EY +++
Sbjct: 143 GPNPNVCYAGSSRGMAPGWTIGGGFEY-ALGPRWSLKGEYLYARF 186
>gi|332701600|ref|ZP_08421688.1| putative outer-membrane protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551749|gb|EGJ48793.1| putative outer-membrane protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 217
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 57/173 (32%), Gaps = 28/173 (16%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSAL---------YNG---SFGEEAHH-NAGGSIFAGY 84
+P +A P F+G Y G Y+G F ++A ++ G
Sbjct: 16 LPVMAHAGSTP----FDGFYIGAKVGNESYQIDVEYDGPSNDFEDDADDSGFVAGVYLGN 71
Query: 85 NVEDSCIMY-GVEGDV---RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140
+ Y G E D N L+ R G ++D LLY G
Sbjct: 72 GRAIKDVFYLGWEVDAMTHNMEGSFSGGNESLDMNWSLGLKARLGGVIADRNLLYGLAGV 131
Query: 141 DVAQKYETGKAG------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
A G + P+ G T G G E +++ L+AR E + Y
Sbjct: 132 RFASFDYRNDTGYILDDEDENPVLPGFTLGGGYEF-AITDHLIARAEVTYTAY 183
>gi|329905096|ref|ZP_08274021.1| hypothetical protein IMCC9480_2393 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547723|gb|EGF32502.1| hypothetical protein IMCC9480_2393 [Oxalobacteraceae bacterium
IMCC9480]
Length = 199
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 20/185 (10%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGS---------FGEEAHHNAGGSIFAGYNVE-DS 89
+F G AG++A Y + +G + GS+ Y +
Sbjct: 16 APQAFAQTAQSRNFEGFSAGINANYAKTRATARFGNQYGSTDDTSTNGSVQGAYGFALND 75
Query: 90 CIMYGVEGDVRYTVPVLA--DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
+ GV + + + S+ + GY ++++ L+Y + +
Sbjct: 76 KFVMGVGATAGFGDLDAGSFNGVSVKAKDMYSIYVEPGYRMTNTTLVYGKLSYQRMKGEL 135
Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLG 200
+G + G GVGV +S + E Y +E ++G
Sbjct: 136 SGAGTSTSDTFDGYGIGVGV-RSMISNKFYVQAELSELDYGSESVRGIEIEPKQTVGTIG 194
Query: 201 VGMKF 205
VG KF
Sbjct: 195 VGYKF 199
>gi|159042840|ref|YP_001531634.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12]
gi|157910600|gb|ABV92033.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12]
Length = 216
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 17/209 (8%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY---- 64
+ A + + + V P + P + G Y G Y
Sbjct: 13 MFRTATAFGLVLAASTGSLYAGNPEPAPVAPVMVAPVPAPAPF-WAGGYIGAQLGYAYGD 71
Query: 65 ----NGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIGGS 119
G++ G + AGY + G E + + ++
Sbjct: 72 FDIDAAIDGDDNDDGFIGGLTAGYLFDVGSGWYVGPEVQYDWADLEITEDGGDTASFDEI 131
Query: 120 LRIR--GGYEVSDSLLLYATVGPD-VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
R++ G E+ + LLY T G + I G+G + + ++
Sbjct: 132 ARLKLIVGREIGNG-LLYGTAGIAYGSLDSAGDVFDGIDGSDTNWLLGLGYDYR-VGDNW 189
Query: 177 VARLEYRASKYSKVEGFYNTISLGVGMKF 205
EY + V+ NT+ + +F
Sbjct: 190 TVGGEYMYHSFDDVDL--NTLHIKAAYRF 216
>gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565]
gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 345
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 16/157 (10%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105
Y + ++ Y G+ + G E + G +F GY + + G+E Y
Sbjct: 28 YGGAKLGWSNFY-GIDESNALTLGNETNDALGAGVFGGYQINKN---LGLELGYDYLGNY 83
Query: 106 LADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158
D + ++ + G+ V+D+L LY VG +
Sbjct: 84 KYDATTAAGAFSDEVKAQLAQLTLKLGFPVTDNLDLYGRVGGGYGWADTKSDVYKDDSRF 143
Query: 159 IGGTAGV-GVEVGGLSESLVARLEYRASK-YSKVEGF 193
+ G G E + ARLEY+ + Y +
Sbjct: 144 V--MVGALGAEYAFNLD-WAARLEYQYTTPYGSRDDT 177
>gi|323137766|ref|ZP_08072842.1| porin [Methylocystis sp. ATCC 49242]
gi|322397063|gb|EFX99588.1| porin [Methylocystis sp. ATCC 49242]
Length = 337
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 56/194 (28%), Gaps = 62/194 (31%)
Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV---------RYTV-- 103
Y GL A +G+ + GG GYN + I+ GVE D+ YT
Sbjct: 86 GYGGLMAANSGNASLNQNGFIGGG-QIGYNYQWSPTIVIGVEADMQGSAIRGSGGYTGVG 144
Query: 104 ------------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
V I + G++R R GY V+ +LL++ T G
Sbjct: 145 QDLYSMGRMMLMPHGTRNSVGGGTIQAGLDWFGTVRGRVGYLVTPTLLVFGTGGLTYGGA 204
Query: 146 YETG------------------------------KAGEITPIAIGGTAGVGVEVGGLSES 175
+ G +G + +G AG G E +
Sbjct: 205 WANGNYTSTSAWCGTPTDACYGGMITTPYSQIAVGSGRTSSTLVGWNAGGGFE-WMFMPN 263
Query: 176 LVARLEYRASKYSK 189
+ E
Sbjct: 264 WSLKAEAFYYDLGS 277
>gi|90425585|ref|YP_533955.1| hypothetical protein RPC_4110 [Rhodopseudomonas palustris BisB18]
gi|90107599|gb|ABD89636.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 274
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 81/285 (28%), Gaps = 101/285 (35%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
V V ++ L A AAD G + ++ G Y G A Y S
Sbjct: 4 VVVGAMLLTVAQEAYAADMPFLRGSVLDGPSRVV----------NWEGFYIGGQASYGTS 53
Query: 68 --------------------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGV 95
G+++ H G F GYN + + ++ G+
Sbjct: 54 DMNFTDATRGLAEQAMTNTLVNSAMQVSDWPTLGKQSAHGQGYGGFVGYNWQWTDVVLGL 113
Query: 96 EGDVRYTVPVL-----------------ADNIHSLHGIG----------GSLRIRGGYEV 128
E Y +D+++ G GS R R G+ V
Sbjct: 114 EA--NYIHGKFDGSDSNVANPMTRCMGLSDSLYHCAGYRSAASIVINDLGSARARAGWSV 171
Query: 129 SDSLLLYATVGPDVAQKYETGKAGEITP---------------------------IAIGG 161
S L Y G + Q A G
Sbjct: 172 -GSFLPYMFGGVSLGQADIVRSASIRDTLYTASPALGGTYVGYNQFDRAKVQNGHFIYGY 230
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205
G+GV++ L R E+ K++ V+ +T+ GVG KF
Sbjct: 231 GGGLGVDMMVF-GGLFVRAEWEYLKFAAPVDTSVSTVRAGVGYKF 274
>gi|209886118|ref|YP_002289974.1| hypothetical protein OCAR_7002 [Oligotropha carboxidovorans OM5]
gi|209874314|gb|ACI94110.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 493
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%)
Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAG-----------------GSIFAGYNVE-DS 89
+++ G Y Y ++ + G+I GY+ + +
Sbjct: 270 SPAYNWTGFYLAGGGGYGMFSADQRSVDTTTGAITGIDTRNGGRGYFGTIAGGYDWQINP 329
Query: 90 CIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATV--- 138
+ GV GD ++ + + G+ G L+ +R GY ++ + L Y
Sbjct: 330 TWVVGVFGDAQF-GDIRGSLSDAGLGVTGRLKNDTNYAAGVRVGYLIAPNALSYVNGGYS 388
Query: 139 -----GPDVAQKYETGKAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYS 188
G + + G G GVE G + + EYR ++YS
Sbjct: 389 HADFKGVTLTDETGLAVGSTGKSHRDGWFIGGGVENDLNFFGINAPGWFMKTEYRVAEYS 448
Query: 189 KVEG 192
+
Sbjct: 449 RKTS 452
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 45/234 (19%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S +A +A AAD R V ++ G Y
Sbjct: 14 MKKILLGSVALIALGSAANAADLSARYTKAPV-----------VAPVSNWTGFYVSGGFG 62
Query: 64 YNGSFGEEAHHNAG---------------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLA 107
Y ++ +G G++ GY+ + + GV GD ++ +
Sbjct: 63 YGIMEADQHATTSGVASVVDTRMGGRGYFGTVGVGYDYQITPSWVVGVFGDAQW-GDIRG 121
Query: 108 DNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI-- 157
+ +GI L+ R GY V+ ++L Y VG A T ++ I
Sbjct: 122 SLMDLNNGITARLKNDAAYAAGARLGYLVAPNVLSYVNVGYSYASFKGTTFDDGVSTIGK 181
Query: 158 --AIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204
G G GVE G + + EYR ++Y++ Y G+ K
Sbjct: 182 SHRDGWFIGGGVENDLNFFGINAPGWFMKTEYRVAEYNRRNSVYAGDIDGIAFK 235
>gi|114320656|ref|YP_742339.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227050|gb|ABI56849.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 218
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 14/161 (8%)
Query: 44 NRYVPIRHDFNGPYAGLSALYNGSFGEEAHHN----------AGGSIFAGYNVEDSCIMY 93
+ F+G Y G + G + + G + +
Sbjct: 34 PATALANNAFHGVYLGGQIGWAGYDTDIETDGDSIKGLAASGVSSGVLLGTGTVNDGWYF 93
Query: 94 GVEGDVRYTVPVLADNIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQKYET-GK 150
G +G+ + + + S + R G +SD +LLY G +
Sbjct: 94 GFQGNFLLNNADASLGTDADLDVEESYGIDARLGRVISDRVLLYGLAGWQRTNAELSVAG 153
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
+ G G GVE +++ R+EY + Y +
Sbjct: 154 VDKDDKDFDGFRFGAGVE-MATQDNVFFRIEYTQTVYGSED 193
>gi|163749836|ref|ZP_02157081.1| outer membrane protein, putative [Shewanella benthica KT99]
gi|161330350|gb|EDQ01329.1| outer membrane protein, putative [Shewanella benthica KT99]
Length = 183
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 22/165 (13%)
Query: 55 GPYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
G Y G + G G ++ GYN DS +G+E + T + +
Sbjct: 27 GFYLGGQVNNTAIEDNIGTFDESAIGFGVYGGYNFNDS---FGIEASIFATDSFVDEMDF 83
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+ + S +R + +DS+ Y G V + Y + + G G GV+V
Sbjct: 84 RMAAMTISPVVR--HAFTDSVTAYLKAGLVVNRTYSDDDDVDESYQGTGWLFGAGVDVT- 140
Query: 172 LSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205
L++SL R+ Y R ++ + + G+ +F
Sbjct: 141 LTQSLALRVFYEISETAPESDERDDDFADISLVQYGV--GLHYRF 183
>gi|296446617|ref|ZP_06888558.1| porin [Methylosinus trichosporium OB3b]
gi|296255845|gb|EFH02931.1| porin [Methylosinus trichosporium OB3b]
Length = 723
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 47/162 (29%), Gaps = 43/162 (26%)
Query: 65 NGSFGEEAHHNAGGSIFAGYNVED---SCIMYGVEGD---------------VRYTVPVL 106
NGS G + GYN I+ G E D V +
Sbjct: 84 NGSIDGNDGGAFLGGVQIGYNFRFDHLGGIIAGFEADLQGVAQGREMRGVSSVSRNILTR 143
Query: 107 ADNIHSLHG------IGGSLRIRGGYEVSDSLLLYATVGPDVAQ---------------- 144
D++ + G++R R G V ++L+Y T G
Sbjct: 144 GDSLINTVDGGGALQFLGTVRARLGLLVDPTVLVYGTGGLAFGGVSYKFGLNSLYANAAG 203
Query: 145 --KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
A + G TAG GVE + S + EY
Sbjct: 204 APAQNASAALDNLTTRSGWTAGAGVE-WMFAPSWSLKGEYLY 244
>gi|220924420|ref|YP_002499722.1| porin [Methylobacterium nodulans ORS 2060]
gi|219949027|gb|ACL59419.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 74/294 (25%), Gaps = 115/294 (39%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------- 69
A+AAD GG P +++G Y G + +
Sbjct: 2 GVTPARAADLDFGTLRGGSYDTPA--------PVGNWDGFYVGGHGGWTSTSFGFGNVFQ 53
Query: 70 -------------------------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR---- 100
+ +AG N + + G E D
Sbjct: 54 APVANYFRLTTYEANLSASTLLRAQDARRDGTSFGAYAGVNFQFDEFVAGAELDYTHLGV 113
Query: 101 -----------------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
+ L + ++R R GY+ + + + Y T G +
Sbjct: 114 TGSTTDAIARQKVTDGYWQALSLVGEAKTRLDDYATIRARFGYD-AGNFMPYVTGGFAIG 172
Query: 144 QKYET-----------------------------GKAGEITPIAI--------------- 159
+ T P +
Sbjct: 173 RAQITDTVTIQARGYDQATYNSNQATGATAYVNRDGYRSFDPTNVSRSVVADPDVVQRTR 232
Query: 160 -----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
G AG G+E L+ +++ R EY+ +++ +G NT+ G +KF
Sbjct: 233 EKIVGGIAAGAGMEF-ALTANILLRAEYQFVQFNDFDGHKANINTVRGGASVKF 285
>gi|144898146|emb|CAM75010.1| outer membrane protein Omp31 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 256
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 53/206 (25%), Gaps = 54/206 (26%)
Query: 45 RYVPIRHDFNGPYAGL-------------SALYNGSF--GEEAHHNAGG----------- 78
D++G Y G + Y + G
Sbjct: 23 AQSAPTVDWSGFYIGGLVGATNSQTQAKTTVGYQKYLNATDARQMAQAGDSDLSQWQPSV 82
Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH----------------GIGGSLRI 122
+ GY + ++ G+E + + +LR
Sbjct: 83 GLVGGYGKQFGHVLLGLEASANSIYLNDERTVSENYVSTPASRFILRQSVRADWMATLRP 142
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAGVGVEVGGL 172
R G+ D+ L Y T G V Q T I G + G G E L
Sbjct: 143 RLGWA-EDNWLGYVTGGLSVTQLQLDTLFVDNAFSGYSKSSDTKIRTGWSLGFGGEY-AL 200
Query: 173 SESLVARLEYRASKYSKVEGFYNTIS 198
S R EY + + ++ T S
Sbjct: 201 SGGWALRGEYLYTNFGALKSMSETTS 226
>gi|148555704|ref|YP_001263286.1| opacity protein and related surface antigens-like protein
[Sphingomonas wittichii RW1]
gi|148500894|gb|ABQ69148.1| Opacity protein and related surface antigens-like protein
[Sphingomonas wittichii RW1]
Length = 188
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 54/167 (32%), Gaps = 18/167 (10%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112
F GP ++ + AGY+ + + GVE + + I S
Sbjct: 26 FTGPRVEGIVGWDRVSNNGHDDAVTYGLGAGYDFQMGGAVLGVEAEA--SDSSAKSCIGS 83
Query: 113 LHGIGGSLRIRGGYEV----------SDSLLLYATVGPDVAQKYETGKAGE----ITPIA 158
L + G ++ LLYA G A+ T G +
Sbjct: 84 ATAADPRLCAKAGRDLYVGGRVGTVVGGKALLYAKAGYTNARAKATLDDGTTVLRDSGNY 143
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
G G GVE L + + EYR S Y + N + G G +F
Sbjct: 144 DGVRVGAGVEY-ALGTNAYVKAEYRYSNYEQ-GFSRNQVVGGFGFRF 188
>gi|300021628|ref|YP_003754239.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523449|gb|ADJ21918.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC
51888]
Length = 500
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 46/223 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + ++ ++L + +A A G G + A P ++G Y G
Sbjct: 1 MKLVLGSLSAAALLCSMASAAYA--------DGPFGSLKDTAPVIEQP---TWSGVYFGA 49
Query: 61 SALYNGSFGEE---------------AHHNAGG--SIFAGYNVEDSC-IMYGVEGDVRYT 102
Y + + H GG S+ G + + + G+ GD+ +
Sbjct: 50 GWGYGHNRSKNNYRDSSGDADSSSSRTEHADGGLVSLLYGADRQIGDRFVVGIFGDIDLS 109
Query: 103 VPVLADNIHSLH---GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
+ ++ R G+ ++ L++AT G A ++ +I P +
Sbjct: 110 DITRGNRDEHNALEIDRAWAIGARAGFLLNSRTLIFATAGYTQAH-FDNDGWWDIDPPSS 168
Query: 160 GGTA--GVGVEVGG-----------LSESLVARLEYRASKYSK 189
GT G G G L+++ R E R S ++
Sbjct: 169 PGTTLRGRGSRTFGGYFVGGGVETRLTDNFFLRGEVRYSDFAG 211
>gi|294010892|ref|YP_003544352.1| putative outer membrane protein [Sphingobium japonicum UT26S]
gi|292674222|dbj|BAI95740.1| putative outer membrane protein [Sphingobium japonicum UT26S]
Length = 171
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 9/154 (5%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH 111
F GP AG++ Y+ + + GY++ + +G E + L +
Sbjct: 26 FTGPRAGVTLGYDKF---DGNDGFAYGASTGYDIAITPNVTFGPEVAFSDSTTSLGAGVE 82
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+ S+R GY ++ +L + VG + + + G G G+E
Sbjct: 83 VSRDLSASVR--LGYILNPKVLAFGKVGYANTRVEASNSNSGGS--FEGVRYGGGLEF-A 137
Query: 172 LSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
++ + EY+ S+Y G + +G+G +F
Sbjct: 138 VTGNTYISAEYQRSEYEDGIGGRDAGVVGIGFRF 171
>gi|209886273|ref|YP_002290130.1| hypothetical protein OCAR_7161 [Oligotropha carboxidovorans OM5]
gi|209874469|gb|ACI94265.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 277
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 76/275 (27%), Gaps = 100/275 (36%)
Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----------- 67
+A AAD G Y ++ G Y G A Y +
Sbjct: 15 QAAHAADMPDYYALRG--------PVGYGTGVVNWQGFYVGGQAAYGSADMNFANSTGSL 66
Query: 68 ---------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106
G E+ H G F GYN + ++ GVE YT
Sbjct: 67 ISRQLQYASIEQSAQVSQWPILGRESQHGHGFGGFVGYNSQWDDVVLGVEA--SYTHGNF 124
Query: 107 ADNIHSLHGI-----------------------------GGSLRIRGGYEVSDSLLLYAT 137
+ GSLR+R GY ++ L Y
Sbjct: 125 NGSASGSLNYVFADIITTPAPGYTDDITYSGTSRFKITDTGSLRVRAGYAW-NNFLPYVF 183
Query: 138 VGPDVAQKYETGKA--------------------------GEITPIAIGGTAGVGVEVGG 171
G + + A + G AG+GV++
Sbjct: 184 GGVSLGRADVARTAVISGTQTNPGAAPPNDVLNVYLAKSEAQGGRFIYGYAAGLGVDMML 243
Query: 172 LSESLVARLEYRASKY-SKVEGFYNTISLGVGMKF 205
+L R+E+ KY ++ NT +G+G KF
Sbjct: 244 F-GNLFGRVEWEYLKYAGPIDTSINTGRVGLGYKF 277
>gi|46205164|ref|ZP_00048920.2| COG3637: Opacity protein and related surface antigens
[Magnetospirillum magnetotacticum MS-1]
Length = 313
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 45/138 (32%), Gaps = 35/138 (25%)
Query: 92 MYGVEGDVRYTVPVLADN-----------------IHSLHGIGGSLRIRGGYEVSDSLLL 134
MYG+E D+ + I + GS R R GY ++ L+
Sbjct: 1 MYGLEADLAGSNLKRGVRSDVQGFGYEAIDPPFALIREKTDLFGSARARLGYAFGNN-LI 59
Query: 135 YATVGPDVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
YAT+G A + +G T G GV+ + L L+YR
Sbjct: 60 YATLGLSGANGRVLATYPDLAGGATATAARDVSYLGFTLGAGVQF-AVDPHLSLGLDYRY 118
Query: 185 SKYSKVEGFYNTISLGVG 202
S + G+G
Sbjct: 119 SDLGESR------RFGLG 130
>gi|254513426|ref|ZP_05125491.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221532430|gb|EEE35426.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 185
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 19/148 (12%)
Query: 46 YVPIRHDFNGPYAGLSALYNGS--------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97
D+NG Y G S N + EA + +F GY V++ ++G E
Sbjct: 17 PTHALADWNGAYVGFSLGTNTTNELSSNVTGSFEADSSTALGVFGGYTVQNDDFVFGGEV 76
Query: 98 DVRYTVPV--LADNIHSLHGIG-GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154
T + D G L+ R GY V +++L Y G + ETG
Sbjct: 77 AFLRTPDLEFEVDGREVTFDFGIFDLKGRAGY-VVNNILFYGVAGFSRISEQETGDH--- 132
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEY 182
A G GVG + L + V +EY
Sbjct: 133 ---ANGFNFGVGADYN-LGNNFVIGIEY 156
>gi|302381465|ref|YP_003817288.1| porin [Brevundimonas subvibrioides ATCC 15264]
gi|302192093|gb|ADK99664.1| porin [Brevundimonas subvibrioides ATCC 15264]
Length = 277
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 52/155 (33%), Gaps = 28/155 (18%)
Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG------------ 117
+E + G GY+ + + G G+ Y+ D++ S
Sbjct: 92 DEDSNGVEGGGRIGYDFQFGNFVVGAVGE--YSGVDAEDSVTSYSTTPAYYVSERNLNNL 149
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVA---------QKYETGKAGEITPIAIGGTAGVGVE 168
+LR R GY L+YAT G T A A G AG G+E
Sbjct: 150 AALRARVGYAY-GPALVYATGGVATGEMTNRFYSSNGQNTFTATTDDDQADGYQAGGGIE 208
Query: 169 VGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
L+ L EY + +E + +G G+
Sbjct: 209 Y-ALAPHLSVTGEYIYT---SLEASDFNVRVGRGI 239
>gi|85704833|ref|ZP_01035934.1| possible outer membrane protein [Roseovarius sp. 217]
gi|85670651|gb|EAQ25511.1| possible outer membrane protein [Roseovarius sp. 217]
Length = 197
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 15/154 (9%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGV 95
P ++ G Y G Y + S G + AGY+ + + G
Sbjct: 34 ATPVAPPAPTSPNWTGFYGGGQIGYGDVDTSAAGVEGDGLIGGVIAGYDYDFGNNWVVGA 93
Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
D + L + R GY++ + LLY T G A G
Sbjct: 94 GLDYDFADIDLGGAASLEEVFR--AKARAGYKIGNG-LLYGTGGYAWADTDTFGDDDG-- 148
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G G E ++E++ E ++
Sbjct: 149 -----YFVGAGYE-HMVTENVSLGGEVLYHQFDD 176
>gi|325915202|ref|ZP_08177525.1| opacity protein [Xanthomonas vesicatoria ATCC 35937]
gi|325538562|gb|EGD10235.1| opacity protein [Xanthomonas vesicatoria ATCC 35937]
Length = 279
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 27/166 (16%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112
A + + GG+ + GY+ + +YGV + + + S
Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDIRDSVSAFSTTPA 139
Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156
+LR R GY + L Y T G + G
Sbjct: 140 LYTFTRQLNRTAALRGRIGYAFGQQGNYLAYFTAGVARGEFDHSFASSNTANSFTGSGGD 199
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
A G AGVG++ LS+ + +EY ++ + + +G+G
Sbjct: 200 SADGYQAGVGLQ-RRLSDHVSVGVEYLFTRLQDEDT---RVRVGLG 241
>gi|148255878|ref|YP_001240463.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146408051|gb|ABQ36557.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 257
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 61/226 (26%), Gaps = 44/226 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ LF A + AA A + T A V +D++G Y G
Sbjct: 2 MKTLFGAT-------VGLGAIAAATSALAADLQMKKGPYTKAPPAVVATVYDWSGFYVGF 54
Query: 61 SAL--------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR 100
+A G A GY + + ++GVE
Sbjct: 55 NAGGGSSRDCWNLVQNANVVVNPALNREGCSGGGGAAVGGQVGYRYQMANWVFGVEAQGD 114
Query: 101 YTVPVLADNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATVGPDVAQKYETGKA- 151
+ + L + R + GY D++L Y G V
Sbjct: 115 WANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAF-DNILGYIKGGAAVVGDRYDTFTT 173
Query: 152 ------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191
GGT G G+E G + + +EY
Sbjct: 174 NTNVMLDRANTTRWGGTIGAGLEY-GFAPNWSVGVEYDHIFLGNKN 218
>gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 369
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 79/229 (34%), Gaps = 57/229 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51
Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ + G + G F GY V G E + Y P D
Sbjct: 52 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 166
Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
G+E ++ + RLEY+ + + + + +S+GV +F
Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 214
>gi|56552387|ref|YP_163226.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753934|ref|YP_003226827.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543961|gb|AAV90115.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258553297|gb|ACV76243.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 267
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 36/228 (15%)
Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71
+ A Q A V + V P T + + + GL + +
Sbjct: 41 TSASDGSAPVQDAPVVAQDTVAQPAVQPVPLTPDPNEVANHSGIKFRGLRVEGDIGWTRA 100
Query: 72 AHHNAGGSIFAGYN-------VEDSCIMYGVEG-----------DVRYTVPVLADNIHSL 113
++ G GY V D+ ++GVEG + + + + +
Sbjct: 101 QANHTTGRNNMGYGGTLGVDAVVDNFFVFGVEGSYWNPSKMWEKNAGNNIAIGSQGNNIG 160
Query: 114 HGIGG-SLR---------IRGGYEVSDSLLLYATVGPDVA--QKYETGKAGEITPIAIGG 161
G S R +R G+ + LL+Y G + AG T +G
Sbjct: 161 QVGNGYSARKMFQEWDATLRMGFLPTKDLLIYMAGGYASGKQRNLYMNGAGAPTSKYVGW 220
Query: 162 T----AGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ G G+E ++++ +YR +++ + +LG G +F
Sbjct: 221 SNGYSVGGGIEYS-ITKNFFMNAQYRWTQFGNHTS-RSRATLGFGFRF 266
>gi|77747747|ref|NP_635849.2| membrane protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|77761086|ref|YP_241570.2| membrane protein [Xanthomonas campestris pv. campestris str. 8004]
gi|188989886|ref|YP_001901896.1| putative outer membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|167731646|emb|CAP49824.1| putative outer membrane protein [Xanthomonas campestris pv.
campestris]
Length = 279
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 56/169 (33%), Gaps = 25/169 (14%)
Query: 55 GPYAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS- 112
G G +A + G + A + AGY+ + +YGV + + + S
Sbjct: 77 GFCGGAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAEYTRNDLRDSVSAFST 136
Query: 113 ---------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGE 153
+LR R GY L Y T G + G
Sbjct: 137 TPALYTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFDHSFASSNTANSFTGS 196
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
A G AG+G++ LS+ + +EY ++ + + +G G
Sbjct: 197 GGDSANGYQAGIGLQ-RRLSDHVSVGVEYLFTRLQDEDT---RVRVGPG 241
>gi|323135881|ref|ZP_08070964.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322398972|gb|EFY01491.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 283
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 57/194 (29%), Gaps = 56/194 (28%)
Query: 51 HDFNGPYAGLSALYNGSFG--------------------EEAHHNAGGSIFAGYNVE-DS 89
+ G Y G++ Y+ + G + G GYN +
Sbjct: 40 FTWTGLYGGVNIGYSFNAGGAGWGYFADPLLLSGATWTANPSAQGVIGGGQIGYNYQYSP 99
Query: 90 CIMYGVEGDV---------------RYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSL 132
++ G E D+ + + A N + G++R R G + +L
Sbjct: 100 WLVIGAEADIQAADINSQQNNWMPSNWFGGLAALNTNKYVDWFGTVRGRLGLVMPSYPNL 159
Query: 133 LLYATVGPDVAQK-----------------YETGKAGEITPIAIGGTAGVGVEVGGLS-E 174
++Y T G + G TAG GVE ++
Sbjct: 160 MVYGTAGFAYGYVSNTVSVANYPFAAFPVPFAQTGQTTSGNTNTGWTAGGGVEWTPMAFP 219
Query: 175 SLVARLEYRASKYS 188
+ ++EY +
Sbjct: 220 AWSLKVEYLYTDLG 233
>gi|332187217|ref|ZP_08388956.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17]
gi|332012638|gb|EGI54704.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17]
Length = 200
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 23/175 (13%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNA--GGSIFA---GYNVEDSCIMYGVEGDV-------- 99
F G Y+ + N+ G ++ GY++ ++ G EG++
Sbjct: 27 FTGFRVEGLIGYDSLNDRQGKDNSSSDGVLYGAGIGYDIPAGPVILGAEGEITGSSSDTR 86
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEIT 155
V V D G R GY +S L Y G A + G +
Sbjct: 87 SNNVTVPGDQFRLGAGRDLYAGARVGYMISPVALGYVKAGYTNAKFDARYTNAGVTNVNS 146
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF-----YNTISLGVGMKF 205
G G G+E +S + + EYR S Y +++G + + G+G++F
Sbjct: 147 QEVGGYRLGAGLEY-AISPNTFVKGEYRYSHYDELDGVGINPNRHQLLAGLGLRF 200
>gi|46203394|ref|ZP_00051591.2| hypothetical protein Magn03005785 [Magnetospirillum magnetotacticum
MS-1]
Length = 299
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 42/136 (30%), Gaps = 29/136 (21%)
Query: 70 EEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIH--------------- 111
++ G GYN + S + GVE D +Y N +
Sbjct: 91 RNSNEGFVGGGQIGYNYQFTPGSGFVIGVEADAQYADFGRNRNRYAFATTTGTGGIIPGT 150
Query: 112 --------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--GKAGEITPIAIGG 161
S G++R R GY D L+Y T G G G
Sbjct: 151 LVYNPSGLSGLDYFGTVRGRLGYAF-DRTLVYGTGGFAYGSGGGREFGTGVSSNDFQTGW 209
Query: 162 TAGVGVEVGGLSESLV 177
AG G+E ++S +
Sbjct: 210 AAGGGIEYALPTDSFL 225
>gi|148253080|ref|YP_001237665.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405253|gb|ABQ33759.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 258
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 62/201 (30%), Gaps = 42/201 (20%)
Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL-------YNGSF-- 68
+ AD R ++ P +D++G Y G++ ++ +F
Sbjct: 14 ASPSFGADQTERVYYNYSRPKPVFE------PNYDWSGFYVGVNVGGGKAHACWDDAFSF 67
Query: 69 ----------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--------NI 110
G + A AGY + + + GVE + ++
Sbjct: 68 GVLNSPAISEGCHSTSGAIAGGQAGYRWQSAFAVLGVEAQGDWANLRGSNISQLDPTLTN 127
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------KAGEITPIAIGGTA 163
++ G + G + +L Y G + G + GGT
Sbjct: 128 RTITDAIGLFTGQAGAAWQN-VLWYIKGGAAITNDKYDGLITGTSVLNDRASGTRWGGTI 186
Query: 164 GVGVEVGGLSESLVARLEYRA 184
G G+E+ G + + +EY
Sbjct: 187 GTGIEI-GFAPNWSVGIEYDH 206
>gi|163743239|ref|ZP_02150620.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
gi|161383427|gb|EDQ07815.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
Length = 194
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 55/174 (31%), Gaps = 18/174 (10%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ V ++++A A A A + P + N D+ G Y G
Sbjct: 1 MTRIVSMAAIAAALSTPAFAGNLEEPVVAPAPAAPPVVVAND----GGDWTGAYIGGQIG 56
Query: 64 YNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
+ + + + AGYN + + G E D T L + + +R
Sbjct: 57 QLDADTSNGLSGDDVSYGVHAGYNYDFGRFVLGGEIDYDATDVDLGGGAAT---VDSVMR 113
Query: 122 IRG--GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG------GTAGVGV 167
+ GY+ +L Y T G + GE I + T G V
Sbjct: 114 GKVKAGYDF-GPVLAYVTGGVAQVDTSVGDETGEFYGIGVAYRVTDQWTVGGEV 166
>gi|260431608|ref|ZP_05785579.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415436|gb|EEX08695.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 179
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 13/145 (8%)
Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
D+ G Y G Y + + G I GY+ + + G D ++ L+
Sbjct: 28 DWTGFYGGAQIGYADIDTNLSGVDGDGVIGGIILGYDYDLGDWVVGGGFDYDWSDIDLSG 87
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
L+ R GY+V+ LLY G A G G G G E
Sbjct: 88 AATVEDVWR--LKARAGYKVNPQGLLYGVAGYAEAGT---DTLGSDD----GWFVGAGYE 138
Query: 169 VGGLSESLVARLEYRASKYSKVEGF 193
++ ++ E ++
Sbjct: 139 -QIVAPNVSIAGEVLYHEFDDFNST 162
>gi|170749700|ref|YP_001755960.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656222|gb|ACB25277.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 287
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 48/183 (26%), Gaps = 59/183 (32%)
Query: 53 FNGPYAGLSALY----------------------------NGSFGEEAHHNAGGSIFAGY 84
+ G Y G++A Y ++ G GY
Sbjct: 40 WTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVVSVNNRSNNNGFSGGAQIGY 99
Query: 85 NVE---DSCIMYGVEGDVRYTVPVLADN------------------------IHSLHGIG 117
N + S I+ G E D +Y N +
Sbjct: 100 NWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLTGTPGFAFSAPRAYVATSGNGLDYF 159
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGVEVGGLSE 174
G+ R R GY D L+Y T G + + G G GVE ++
Sbjct: 160 GTARGRLGYAF-DRTLVYGTGGYAYGSGQDDQTFAGRNFRSSFRNGYAVGGGVEYALPTD 218
Query: 175 SLV 177
S +
Sbjct: 219 SFL 221
>gi|254437354|ref|ZP_05050848.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307]
gi|198252800|gb|EDY77114.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307]
Length = 197
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 18/194 (9%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+F A ++L ++ ++ A + + + D+ G Y G S
Sbjct: 1 MFFAATTTALTMSVASASFAGNLSEPIIAPSPAAMAAPVYSTGT----DWTGFYVGGSLG 56
Query: 64 YNGSFGEEA----HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119
Y +++ A I AGY+ + + G E ++ V
Sbjct: 57 YAEGSEDDSTVFEDDGATYGIHAGYDYDFGNFVLGAELELS-GFDVSDGGNDIDSVSRAK 115
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
LR GY+ + + L Y TVG + G + GVG++ L++ +
Sbjct: 116 LRA--GYD-AGAFLPYLTVGVA---SLDIGGGLDANDTGSFY--GVGMDY-MLNDRIRLG 166
Query: 180 LEYRASKYSKVEGF 193
E ++ +
Sbjct: 167 GEVLQHEFGNFDNT 180
>gi|254475346|ref|ZP_05088732.1| putative outer membrane protein [Ruegeria sp. R11]
gi|214029589|gb|EEB70424.1| putative outer membrane protein [Ruegeria sp. R11]
Length = 190
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 54/181 (29%), Gaps = 22/181 (12%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ V ++++A A A A + V + T D+ G Y G
Sbjct: 1 MTRIVSMAAIAAALSTPAFAGNLEEPVVEPVPAPVTVVQTGT------DWTGAYIGGQIG 54
Query: 64 YNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
+ + + I AGYN + + G E D T L + R
Sbjct: 55 QLDADTSNGLSGDDVSYGIHAGYNYDFGQFVLGGELDYDATDTDLGGAT-----VDSVAR 109
Query: 122 IRG--GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG------GTAGVGVEVGGLS 173
+ GYE +L Y T G + GE I + T G +
Sbjct: 110 AKVKAGYEF-GPVLAYVTGGVAQVDTSVGDETGEFYGIGMAYRVNEQWTVGGEILEHDFD 168
Query: 174 E 174
+
Sbjct: 169 D 169
>gi|39936343|ref|NP_948619.1| heme receptor [Rhodopseudomonas palustris CGA009]
gi|39650198|emb|CAE28721.1| possible heme receptor [Rhodopseudomonas palustris CGA009]
Length = 1191
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 45/149 (30%)
Query: 45 RYVPIRHDFNGPYAGLSALYN----------------GSFGEEAHHNAGG----SIFAGY 84
+++G +AG++ YN G EA + G + AGY
Sbjct: 935 APSAAVANWSGFHAGVNTAYNSAKFGGAMTALDGSADGHAANEAPNQQVGALSFGLHAGY 994
Query: 85 NVEDSC-IMYGVEGDVRYTVPVLADNIHSLHG------------------------IGGS 119
+ + + + G+E DV T + + G +
Sbjct: 995 DYQFASRFIVGIEADVAKTDIGASQVTFASEGVACNCANNLARMRQLEAVQQSEIKWLST 1054
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYET 148
+R R GY V+D L+L+A+ G ++ E+
Sbjct: 1055 VRGRLGYAVNDRLMLFASGGVAFMRQDES 1083
>gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 358
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 67/204 (32%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 40
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 41 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNTPGGASYKDHDTGVSPV 155
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
G+E ++ + RLEY+ +
Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTN 178
>gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 358
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 79/229 (34%), Gaps = 57/229 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40
Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ + G + G F GY V G E + Y P D
Sbjct: 41 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155
Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
G+E ++ + RLEY+ + + + + +S+GV +F
Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 203
>gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
Length = 344
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 32/193 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++LF + A+++ S AA R Y G+
Sbjct: 1 MKRLFTVLLC---AISTITSYYAAANSREEVETSI---------------------YVGI 36
Query: 61 SALYNGSFGEEAHH-------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113
A Y+ + G + + + G +F GY++ + D+ T ++
Sbjct: 37 RAGYSYNEGSCSSNHLKCDKSDTGYGLFIGYDINPRWAIETSFNDIGDTTATYSNAHLDG 96
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+ ++ Y + +L LY VG G+ + + G G+E+ +S
Sbjct: 97 DLSQIDISVKYAYPIYQNLSLYGKVGAAYWDAKAKGQNVSFSDTGVSPLLGAGLELI-IS 155
Query: 174 ESLVARLEYRASK 186
E R+EY+
Sbjct: 156 EHWKGRIEYQYID 168
>gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 369
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51
Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ + G + G F GY V G E + Y P D
Sbjct: 52 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGT 162
N + + G L + GY ++D L +Y +G A G T +
Sbjct: 107 NTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPV 166
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
G+E ++ + RLEY+ +
Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTN 189
>gi|148253343|ref|YP_001237928.1| hypothetical protein BBta_1819 [Bradyrhizobium sp. BTAi1]
gi|146405516|gb|ABQ34022.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 302
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/305 (17%), Positives = 81/305 (26%), Gaps = 112/305 (36%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L +AV V +AQAAD G T R +++G Y G
Sbjct: 10 MRSLVMAVSV----FGMVSAAQAADMPDLPVLRGGL------TEGLNGARANWDGYYVGG 59
Query: 61 SALYNGSFGEEAHH------------------------------NAGGSIFAGYNVEDSC 90
Y S + + + ++ G N +
Sbjct: 60 QFGYGTSDMDFSRSAASLTNFIFRNSVLQTPTSTWSVLNKNHVQGSSFGVYVGRNFQWED 119
Query: 91 IMYGVEGDVRY-TVPVLADNIHSLHGI---GG---------------------------S 119
++G+E + Y V + I G +
Sbjct: 120 TVWGIEVNYNYMNRMVSSSGSSMALNIVNPSGETVAANETRTYSTSVQAAAALQIKDVVT 179
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI------------------------- 154
LR R G+ +D+ L Y G V + + A
Sbjct: 180 LRGRVGWA-ADNFLPYVFGGLAVGRMETSRVATTNVYLTDTFVNQTTGAIISQTGPSYLP 238
Query: 155 -----------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG---FYNTISLG 200
G T G+G E L AR E+ K+ V+ N+ G
Sbjct: 239 SVSRTYGESRTNSFVGGWTGGLGFEYMMW-GGLFARGEWEYVKFMTVKDTAVTLNSFRAG 297
Query: 201 VGMKF 205
VG KF
Sbjct: 298 VGYKF 302
>gi|323138214|ref|ZP_08073286.1| porin [Methylocystis sp. ATCC 49242]
gi|322396466|gb|EFX98995.1| porin [Methylocystis sp. ATCC 49242]
Length = 259
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 46/183 (25%)
Query: 51 HDFNGPYAGLSAL---------------YNGSFG---------EEAHHNAGGSIFAGYNV 86
+ G Y G++ + G ++ G + AGYN
Sbjct: 39 FSWTGFYGGVNIGGSWLDRYNYDAWGPAWTGFGWINATQIAATNFSNAGVSGGVQAGYNY 98
Query: 87 EDSCI-MYGVEGDVRYTVPVLADNIHSLHGIG------------------GSLRIRGGYE 127
+ + GVE D + T + A +++ G+G G++R R G
Sbjct: 99 QLWSWLVAGVEADFQGT-SIGASGVNNGWGLGFAGLPVLWGGASRGVDYFGTVRGRLGVT 157
Query: 128 VSD--SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
+ L+Y T G + G G + ++EY +
Sbjct: 158 LPGWQQFLVYGTGGFAYGEIRINNGWLGNLRAVGTGWTVGGGVEWAFMPNWSTKVEYLYT 217
Query: 186 KYS 188
Sbjct: 218 SIG 220
>gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 369
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 52 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 166
Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
G+E ++ + RLEY+ + + + + +S+GV +F
Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 214
>gi|170750729|ref|YP_001756989.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657251|gb|ACB26306.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 314
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 64/227 (28%), Gaps = 66/227 (29%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + + + L L +A+AAD G D++G Y G
Sbjct: 1 MRTVTFPLL-AVLGLCGVNTARAADLDYDYLRGADYDPVPAPVV-------DWSGVYVGG 52
Query: 61 S------------------ALYNGSFGEEAHH--------------NAGGSIFAGYNVED 88
A Y E+ A FAG+NV+
Sbjct: 53 HGGFTSGGLSQRNAMQSTLANYFAYSTVESEFSVSKMLSLPGTRTRGASFGAFAGFNVQF 112
Query: 89 SCIMYGVEGDVRYTVPVL----------------------ADNIHSLHGIGGSLRIRGGY 126
I+ G+E D +T + ++ G++R R GY
Sbjct: 113 DGIVLGIEADYTHTDQNSWSTNGINRIMTTAAGNSESVNLSGTSNTRIEDYGTIRGRAGY 172
Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+ LL Y T G + + + G +A L+
Sbjct: 173 AFGN-LLPYVTAGAAIGRVTINDTV---SVQNYGYSATTYAANQALT 215
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 10/90 (11%)
Query: 125 GYEVSDSLLLYATVGPDVAQKYETG------KAGEITPIAIGGTAGVGVEVGGLSESLVA 178
GY + P A T G G G+E ++ +++
Sbjct: 226 GYASFNPNFPLNNSTPAGQGAQTVPYAPTPLTANARTKTIGGVALGFGLEY-AITPNILV 284
Query: 179 RLEY---RASKYSKVEGFYNTISLGVGMKF 205
R EY R ++ NT+ G +KF
Sbjct: 285 RGEYQYVRFQDFNGHNAQLNTVRGGAAVKF 314
>gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 350
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDFYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + G+E ++ + RLEY+ +
Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170
>gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073]
gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073]
Length = 379
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 28 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 61
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 62 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 116
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 117 NINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 176
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 177 FAGGVEY-AITPEIATRLEYQWTN 199
>gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39]
gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605]
gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39]
gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605]
Length = 374
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 57 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 111
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 112 NINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 171
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 172 FAGGVEY-AITPEIATRLEYQWTN 194
>gi|170743796|ref|YP_001772451.1| PE-PGRS family protein [Methylobacterium sp. 4-46]
gi|168198070|gb|ACA20017.1| PE-PGRS family protein [Methylobacterium sp. 4-46]
Length = 502
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137
G + G N + + ++YG E D+ + H + GSLR R G+ + LLLY T
Sbjct: 336 GGLHLGANAQSARLVYGAEADI-------DAGTDANHRVLGSLRGRLGWVLDRDLLLYGT 388
Query: 138 VGPDVAQ 144
G +A+
Sbjct: 389 AGLGLAR 395
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 40/121 (33%), Gaps = 39/121 (32%)
Query: 52 DFNGPYAGLSAL-----------YNGSFGEEAHHNAGG-------------------SIF 81
D++G Y G +G G GG +
Sbjct: 34 DWSGFYLGAQTGGFATGQGRRTFVSGDGGGLTPTVFGGRGGRTGIVAGTVEGRTIFEGVH 93
Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
AGYN + ++ GVEGD+ P+ + SLR R G + L+Y T G
Sbjct: 94 AGYNWQRGDLVGGVEGDLSAAGPL--------DDVLASLRGRVGVA-TGRALVYGTAGLG 144
Query: 142 V 142
+
Sbjct: 145 I 145
>gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627]
gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627]
Length = 358
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 66/196 (33%), Gaps = 35/196 (17%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA Y + ++ +
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQFHDTG 51
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGI 116
N G + G F GY V G E + Y P DNI+ +
Sbjct: 52 FIDNN---GPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDNINGAYKA 103
Query: 117 GG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGTAGVGVEVG 170
G L + GY ++D L +Y +G A G + + GVE
Sbjct: 104 QGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPVFAGGVEY- 162
Query: 171 GLSESLVARLEYRASK 186
++ + RLEY+ +
Sbjct: 163 AITPEIATRLEYQWTN 178
>gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane major heat-modifiable protein; AltName:
Full=Outer membrane protein 33K; Flags: Precursor
gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 350
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + G+E ++ + RLEY+ +
Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170
>gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1]
gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591]
gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1]
gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591]
Length = 374
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 77/229 (33%), Gaps = 57/229 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 57 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 111
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 112 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 171
Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
GVE ++ + RLEY+ + + + + +SLGV +F
Sbjct: 172 FAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRF 219
>gi|114763049|ref|ZP_01442479.1| possible outer membrane protein [Pelagibaca bermudensis HTCC2601]
gi|114544373|gb|EAU47381.1| possible outer membrane protein [Roseovarius sp. HTCC2601]
Length = 199
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 16/163 (9%)
Query: 52 DFNGPYAGLSALYNG----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
D+ GP G+ Y +E A + A Y+ + + G V Y +
Sbjct: 44 DWTGPSVGVQLGYGYADPDGPEDETSDGAVYGLNAYYDHDFGNWIAG--AGVEYEGADID 101
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167
+ R GY++ + ++Y G A T + G GVG
Sbjct: 102 LGEAGDLESMARVGGRVGYDL-GTTMVYGQGGYARA---MTDGGSLDAGDSNGYYVGVGA 157
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFY-----NTISLGVGMKF 205
E +++++ + + +++S + T ++G+ +F
Sbjct: 158 ETY-VADNVTLSGDVKYNEFSDFDDDDLEIGATTATVGLNYRF 199
>gi|170729161|ref|YP_001763187.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169814508|gb|ACA89092.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 182
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 16/161 (9%)
Query: 55 GPYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
G Y G A + G G ++ GYN DS +G+E T + +
Sbjct: 26 GFYLGGQANQTSLEDNIGVLDESAKGLGVYGGYNFNDS---FGIEAGFFATDSFVDEVDV 82
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+ S IR + +DS+ Y G + + Y + + G G GV+V
Sbjct: 83 RMAAFSLSPVIR--HAFTDSVTGYLKAGLVLNRIYSDDDEVDESYQGTGWLFGAGVDVT- 139
Query: 172 LSESLVARLEYRASKY----SKVEGFYNTISL---GVGMKF 205
++ESL R+ Y ++ S+++ +Y ISL G+G+ +
Sbjct: 140 ITESLALRVFYEINETEPENSELDNYYADISLVQYGIGLHY 180
>gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 369
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 52 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGT 162
NI+ + G L + GY ++D L +Y +G A G T +
Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPV 166
Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
G+E ++ + RLEY+ + + + + +S+GV +F
Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 214
>gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 358
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40
Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ + G + G F GY V G E + Y P D
Sbjct: 41 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGT 162
N + + G L + GY ++D L +Y +G A G T +
Sbjct: 96 NTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPV 155
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
G+E ++ + RLEY+ +
Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTN 178
>gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 326
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 21/161 (13%)
Query: 57 YAGLSALYNG---------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
Y G A + S + N G +FAGY V + +E +
Sbjct: 27 YVGARAGASHITNMDDAVTSVTKLEDTNFAGGVFAGYQVTP---WFALETGYTHLGNAEL 83
Query: 108 DNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG--TAG 164
DN + G+ L + Y +SDS+ ++A G G + G TAG
Sbjct: 84 DNKQGSYEAQGADLVTKFSYAISDSVDIFAKAGAFYYDWNAIGSGVSNSD--NGWSPTAG 141
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
G+E +++++ RLEY+ Y+ V G G+G+ F
Sbjct: 142 AGIEY-FINKNVSTRLEYQY--YNDVAGPDIHF-AGLGLAF 178
>gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9]
gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9]
Length = 374
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 57 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 111
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 112 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 171
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 172 FAGGVEY-AITPEIATRLEYQWTN 194
>gi|115526159|ref|YP_783070.1| hypothetical protein RPE_4165 [Rhodopseudomonas palustris BisA53]
gi|115520106|gb|ABJ08090.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 263
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 78/271 (28%), Gaps = 82/271 (30%)
Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66
+ +++AL +AQ A+ G ++ G Y G A Y
Sbjct: 3 GLAGAAVALGLGLAAQGAEAADMPFLRGALFDGPRRHV-------NWEGFYVGGHAGYGT 55
Query: 67 SFGEEAH--------------------------------HNAGGSIFAGYNVEDSCIMYG 94
S + H G F GYN + ++ G
Sbjct: 56 SDMNFTNATEGVVAKLLDNTVVESLLGVSSWPVLDKRSAHGHGYGGFVGYNAQWDSVVLG 115
Query: 95 VEGD----------------------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSL 132
+E + + Y + ++ + GS R+R GY
Sbjct: 116 IEANYLHGNFGGATTGSMARELISGGINYGATNTSSASINVRDV-GSARLRAGYAWKG-F 173
Query: 133 LLYATVGPDVAQK-----------------YETGKAGEITPIAIGGTAGVGVEVGGLSES 175
L Y G + Q + + G GVG++ L
Sbjct: 174 LPYMFGGVSLGQADIIRAATIRGRDAGGTWVLSAAQAQHGHFIYGYAGGVGID-MMLVGG 232
Query: 176 LVARLEYRASKYSK-VEGFYNTISLGVGMKF 205
L R E+ K++ V+ +T+ G+G KF
Sbjct: 233 LFLRAEWEYLKFAAPVDTSVSTVRAGLGYKF 263
>gi|86748435|ref|YP_484931.1| hypothetical protein RPB_1310 [Rhodopseudomonas palustris HaA2]
gi|86571463|gb|ABD06020.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 265
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 42/177 (23%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV----------RYTVPVLAD---------N 109
G+ + G F GYN + ++ G+E + Y + + N
Sbjct: 91 GKSSSRGQGWGGFVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRIFSTGGVTYDVDYN 150
Query: 110 IHSLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA---------------- 151
+ + GS R+R G+ + S L YA G + Q A
Sbjct: 151 AAASIKVNDVGSARLRAGWAI-GSFLPYAFGGVALGQADIVRTARISGTQGGTAFTPLVS 209
Query: 152 --GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205
+ + G + G+GV+ L L R E+ K++ + +T+ GVG KF
Sbjct: 210 NLVQNSHFIYGYSGGLGVD-MMLYRGLFVRAEWEYQKFAAPINTAVSTVRAGVGYKF 265
>gi|209966189|ref|YP_002299104.1| outer membrane protein, putative [Rhodospirillum centenum SW]
gi|209959655|gb|ACJ00292.1| outer membrane protein, putative [Rhodospirillum centenum SW]
Length = 219
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 61/190 (32%), Gaps = 37/190 (19%)
Query: 53 FNGPYAGLSALYN-------------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
F+GPY G Y + G+ + +AGY + + G+E +
Sbjct: 30 FDGPYIGAFFAYADLDVDARATVGSVTTTGDGSGDGWTFGAYAGYGMSLGPVYAGLEAEY 89
Query: 100 RYTV---PVLADNIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE- 153
V A NI + S + R G V D +L+Y G Q G
Sbjct: 90 GLNGSSIGVRAGNIRTSFDAQDSYGVSARLGTVVMDRILVYGRFGRQWTQFDVKNTLGTV 149
Query: 154 ---ITPIAIGGTAGVGVEVG----GLSESLVARLEYRASKYSKVEGF-----------YN 195
G G GVE G ++++ RLEY Y + +
Sbjct: 150 AIGSDDRLDGWRYGGGVEYALAGPGKGDNMLVRLEYSYFDYDDLATTAQLASTAAQVDES 209
Query: 196 TISLGVGMKF 205
I +G +F
Sbjct: 210 QIRVGFAYRF 219
>gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 358
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 41 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155
Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
G+E ++ + RLEY+ + + + + +S+GV +F
Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 203
>gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 358
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 41 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155
Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
G+E ++ + RLEY+ + + + + +S+GV +F
Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 203
>gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9]
Length = 369
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 52 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 166
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 167 FAGGVEY-AITPEIATRLEYQWTN 189
>gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5]
gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5]
Length = 358
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135
Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G T + GVE ++ + RLEY+ +
Sbjct: 136 KSNVPGGASTKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178
>gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor
gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 350
Score = 52.0 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DN + + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G T + G+E ++ + RLEY+ +
Sbjct: 128 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170
>gi|103486581|ref|YP_616142.1| membrane protein [Sphingopyxis alaskensis RB2256]
gi|98976658|gb|ABF52809.1| membrane protein [Sphingopyxis alaskensis RB2256]
Length = 277
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 22/138 (15%)
Query: 83 GYNVEDSCIMYG--VEGD--------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSL 132
GY+ + G VEG ++ + + + R+R GY
Sbjct: 107 GYDKRMGNFVLGAVVEGGHSVARDSVSGFSTTPASYTMSREADYQANARLRAGYTPGGGA 166
Query: 133 LLYATVGPDVAQ--------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
L Y T G A+ A A G T G G E ++ ++ LEY
Sbjct: 167 LFYVTGGGAYARLDNRFTTTNTANSFADNGKTNAWGYTVGGGAE-LMVTNNIGIGLEYLY 225
Query: 185 SKYSKVEGFYNTISLGVG 202
+ + +++G G
Sbjct: 226 TDVKDKDY---VVNVGPG 240
>gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86]
Length = 358
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178
>gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 350
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + G+E ++ + RLEY+ +
Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170
>gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 350
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + G+E ++ + RLEY+ +
Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170
>gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 355
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGG--- 125
+ +F GYNV + +EG YT + D H+L + G
Sbjct: 63 RDDFAAGLFMGYNVTP---WFAIEG--GYTWLGEATLKGDEHHNLGKVEQQAIDLVGKFT 117
Query: 126 YEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183
Y+ +D + LY VG + G + I TAG+G E +++L AR EY+
Sbjct: 118 YQATDKVDLYTKVGGAWQFTRAKVEGVGSDRDDSLIA-TAGLGAEYH-FTDNLSARAEYQ 175
Query: 184 A 184
Sbjct: 176 Y 176
>gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1]
gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1]
Length = 358
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 195 LSLGVSYRF 203
>gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1]
gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1]
Length = 358
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178
>gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1]
gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1]
Length = 342
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 26/182 (14%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIM 92
Y+P + + YAG + GS++ GY V
Sbjct: 19 ASEPPSYLPFQSYW---YAGAGLGQGHYSNGSNPQSYDSVRDRFAGSVYLGYQVNPY--- 72
Query: 93 YGVEGDVRYTVPVLADNIHSLHGIGGS-----LRIRGGYEVSDSLLLYATVGPDVAQKYE 147
+ ++ Y A + I G L R GY ++ SL Y VG +
Sbjct: 73 --LAPELSYQFLGSAYANYEQGQISGDFQQVVLAARFGYPLTTSLYPYVKVGGAGWFG-D 129
Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----YNTISLGVGM 203
+ + GVE + L RLE++ + + ++ +LG+
Sbjct: 130 SEGLRSGSERGFSPIVAAGVEY-AFTPRLSGRLEHQYTDSLGADSIGYTDHHLTTLGLSW 188
Query: 204 KF 205
+F
Sbjct: 189 RF 190
>gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1]
Length = 358
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178
>gi|192292069|ref|YP_001992674.1| TonB-dependent heme/hemoglobin receptor family protein
[Rhodopseudomonas palustris TIE-1]
gi|192285818|gb|ACF02199.1| TonB-dependent heme/hemoglobin receptor family protein
[Rhodopseudomonas palustris TIE-1]
Length = 1186
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 47/163 (28%)
Query: 33 GGRGVVPTIATNRYVP--IRHDFNGPYAGLSALYNGSFGEEAHHNAGG------------ 78
G V P T + P D++G +AG++ YN + A G
Sbjct: 916 GSETVTPGSLTRLFAPSTAVADWSGFHAGVNTAYNSAKFGGAMTALDGSADSHAANEAPN 975
Query: 79 --------SIFAGYNVEDSC-IMYGVEGDVRYT------------------------VPV 105
+ AGY+ + + + G+E D+ T +
Sbjct: 976 QQVGALSFGLHAGYDYQFANRFIVGIEADIAKTEIGAPQVTFAAEGVACNCANNLARMRQ 1035
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
S ++R R GY V+D L+L+A+ G ++ E+
Sbjct: 1036 FEAVQQSEIKWLSTVRGRLGYAVNDRLMLFASGGVAFMRQDES 1078
>gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli]
gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli]
gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli]
gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli]
gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli]
gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178
>gi|126735685|ref|ZP_01751430.1| possible outer membrane protein [Roseobacter sp. CCS2]
gi|126714872|gb|EBA11738.1| possible outer membrane protein [Roseobacter sp. CCS2]
Length = 205
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 40/124 (32%), Gaps = 13/124 (10%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHH---NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
D+ G YAG Y + + AGY + + G E D+ T
Sbjct: 50 SDWTGFYAGAQLGYGVVEADALSDDGEDLTYGAHAGYLYDFGSWVLGGELDLDGTEISQD 109
Query: 108 DNIHSLHGIGGSLRI--RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+ R R GY+ D L Y T G Q + GG AG+
Sbjct: 110 -----GIDVDTVTRAKLRLGYDAGD-FLPYITGGVA--QLRTSSDDDTFDGDDTGGFAGL 161
Query: 166 GVEV 169
G+E
Sbjct: 162 GLEY 165
>gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1]
Length = 358
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178
>gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7]
gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7]
Length = 358
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 195 LSLGVSYRF 203
>gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli]
gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli]
gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 195 LSLGVSYRF 203
>gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 339
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 51 HDFNGPYAGLSAL------YNGSFGEEAHH---NAGGSIFAGYNVEDSCIMYGVEGDVRY 101
+D+ Y GL Y S GE + N GG +F GYN D + +EG Y
Sbjct: 25 NDW---YTGLRLGATDYTDYKISGGESSSAIDANIGGGLFLGYNFVD---WFALEGGYTY 78
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161
+ + H + L + + +D+L L+ G K + A + A
Sbjct: 79 LGELETSEKITNHALE--LVGKFTLQATDNLDLFVKAG-AFGYKTDADSANDDGFNA--- 132
Query: 162 TAGVGVEVGGLSESLVARLEYRA 184
TAG G E ++++ RLEY+
Sbjct: 133 TAGFGAEY-FFNDNVSTRLEYQY 154
>gi|325919158|ref|ZP_08181215.1| opacity protein [Xanthomonas gardneri ATCC 19865]
gi|325550365|gb|EGD21162.1| opacity protein [Xanthomonas gardneri ATCC 19865]
Length = 279
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 53/166 (31%), Gaps = 27/166 (16%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112
A + + GG+ + GY+ + +YGV + + + S
Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDLRDSVSAFSTTPA 139
Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156
+LR R GY L Y T G +
Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGEQGDFLAYFTAGVARGEFDHSFSSSNTANSFTSSGGD 199
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
A G AGVG++ LS+++ +EY ++ + + +G G
Sbjct: 200 SADGYQAGVGLQ-RRLSDNVSVGVEYLFTRLEDEDT---RVRVGPG 241
>gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017]
Length = 356
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 195 LSLGVSYRF 203
>gi|27375114|ref|NP_766643.1| hypothetical protein blr0003 [Bradyrhizobium japonicum USDA 110]
gi|27348250|dbj|BAC45268.1| blr0003 [Bradyrhizobium japonicum USDA 110]
Length = 197
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 19/133 (14%)
Query: 69 GEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI--------GG 118
G HH GG++ GY + + ++G+E + ++ + G+ G
Sbjct: 14 GMGRHHATGGTVGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFG 73
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-------GEITPIAIGGTAGVGVEVGG 171
+ GY +++LLY G V + + GGT G G+E G
Sbjct: 74 LFTGQVGYAW-NNVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEF-G 131
Query: 172 LSESLVARLEYRA 184
+ + +EY
Sbjct: 132 FAPNWSIGVEYDH 144
>gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15]
gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1]
Length = 350
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 358
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 51/204 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 41 KLGWSQYHDTGFINNDGPTDENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162
NI+ + G L + GY ++D L +Y +G A G + +
Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
G+E ++ + RLEY+ +
Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTN 178
>gi|312115901|ref|YP_004013497.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221030|gb|ADP72398.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 266
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 53/161 (32%), Gaps = 34/161 (21%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ L V + +A SA AAD + G P + G Y G
Sbjct: 1 MKKILLGV---ASFVALSSSAFAADL----YKGSLKDAPVYEAPA------IWTGLYVGA 47
Query: 61 SALYNG------------SFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVL 106
Y + G GG + GYN + I+ GV D+
Sbjct: 48 HGGYAWDSIDFPGTPSHANGGAPRPDLEGGFVGGQIGYNYQFDKIVVGVVADISAANLEK 107
Query: 107 AD------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
+ N + G++R GY +L YATVG
Sbjct: 108 TERDGNYLNETTSIDKFGTVRAILGYSF-GKVLPYATVGYG 147
>gi|218530922|ref|YP_002421738.1| porin [Methylobacterium chloromethanicum CM4]
gi|218523225|gb|ACK83810.1| porin [Methylobacterium chloromethanicum CM4]
Length = 285
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 66/247 (26%), Gaps = 62/247 (25%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSA 62
+ A+ + A +A AAD RR + P + G YAGL
Sbjct: 1 MIRALLLGGTAALVSTAALAADLPRRE----------APPIAFAPVPVFTWTGFYAGLHT 50
Query: 63 LYN--------------------------GSFGEEAHHNAGGSIFAGYNVED---SCIMY 93
Y S E + GYN + +
Sbjct: 51 GYAFTDNPNIQTRGNDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNHQFTPGGGFVA 110
Query: 94 GVEGDVRYTVPVLADNIHSL--------------HGIGGSLRIRGGYEVSDSLLLYATVG 139
G+ D + + G++ + GY D +Y T G
Sbjct: 111 GLAFDATWLDLDKRTGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAF-DRFFVYGTGG 169
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199
+ T G G ++ + +EY V+ F N S+
Sbjct: 170 LAFGHVSYGADFFNPGATVLQYT-GGGRKIFETGYNYGGGIEYAI----PVDSFLNYFSV 224
Query: 200 G--VGMK 204
G +G+K
Sbjct: 225 GRWLGIK 231
>gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042]
Length = 350
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 128 KSNVPGGVSTKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
Length = 350
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 187 LSLGVSYRF 195
>gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354]
gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354]
Length = 350
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|86553066|gb|ABC72124.2| heme-binding phage-associated protein [Bartonella henselae phage
60457]
Length = 171
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 32/121 (26%)
Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72
+AL S +AQAAD + V +A + G Y G G+F +
Sbjct: 1 IALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48
Query: 73 H-------------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS 112
G I+AG N++ ++ GVE D + A +
Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSA 108
Query: 113 L 113
Sbjct: 109 K 109
>gi|302383863|ref|YP_003819686.1| membrane protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194491|gb|ADL02063.1| membrane protein [Brevundimonas subvibrioides ATCC 15264]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 27/183 (14%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGD 98
T + F+ + N + + G F AGY+ + ++ G+ D
Sbjct: 59 DTVNTTAPANAFSPGFCDGRPQGNNAGAGCRDDDDGSGEFGARAGYDFQTGPVVVGIVAD 118
Query: 99 VRYTVPVLADNIHSLHGIGGS----------LRIRGGYEVSDSLLLYATVGPDVAQKYET 148
P + + S + R R G L Y T G AQ +
Sbjct: 119 FSKVNPQDSVSAFSTTPANYAFKREVQHLFGARFRLGLAY-GRYLPYVTGGYASAQIEDK 177
Query: 149 GKAG---------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199
+ A G G G+E ++ + LEY + ++ T+
Sbjct: 178 YSTSNTANSFTPTTQSQDADGYQLGGGIETR-VTSNFSVGLEYLYTD---IDADPLTVRT 233
Query: 200 GVG 202
G G
Sbjct: 234 GPG 236
>gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972]
Length = 350
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli
M863]
gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli
TW10509]
gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v]
Length = 350
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88]
Length = 350
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|88062407|gb|ABD38964.1| Pap31 [Bartonella quintana]
Length = 175
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 51/187 (27%), Gaps = 71/187 (37%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
S +AL S +AQAAD + A + G Y G G+F
Sbjct: 2 SVIALISASAAQAADVIATHE----------AAPVITTPNFSWTGFYIGGQI---GNFTS 48
Query: 71 EAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV------- 103
+ G I+AG N++ ++ GVE D +
Sbjct: 49 DNKIKGLGKETSIFTKGLTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWADCEATKTS 108
Query: 104 -------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSDSL 132
++D+ G+ R R G+ D +
Sbjct: 109 AIRTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIGFSAFDRV 168
Query: 133 LLYATVG 139
+ Y G
Sbjct: 169 MPYFAGG 175
>gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A]
gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271]
gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli]
gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A]
gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271]
Length = 350
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 187 LSLGVSYRF 195
>gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 360
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 73/218 (33%), Gaps = 33/218 (15%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA Y + ++ Y +
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGAKLGWS-QYHDI 50
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYN------VEDSCIMYGVEGDVRYTVPVLADNIHSLH 114
+ G G F GY E G YT +
Sbjct: 51 GNNQINNAGPTHESQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGYTDETHNNGAFKAQ 110
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLS 173
G+ L + GY ++D L +Y +G V + G + + GVE ++
Sbjct: 111 GVQ--LTAKLGYPITDDLDVYTRLGGMVWRADAKNNTGFKDHDTGVSPVFAGGVEY-AIT 167
Query: 174 ESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
+ RLEY+ + + V G + +S+GV +F
Sbjct: 168 PEIATRLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 205
>gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401]
gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401]
Length = 348
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 187 LSLGVSYRF 195
>gi|89052837|ref|YP_508288.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1]
gi|88862386|gb|ABD53263.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1]
Length = 196
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 15/146 (10%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSAL--------YNGSFGEEAH-HNAGGSIFAGYNVE 87
P A + + G + G+ ++ + G E+ G + G+ +
Sbjct: 14 ASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAPGIESELDGMSGGVQIGFRRQ 73
Query: 88 DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS---LRIRGGYEVSDSLLLYATVGPDVAQ 144
+ +YG E + PV+ + + L + GY++ L Y T+G
Sbjct: 74 TNAFVYGGEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDL-GRFLPYGTLGVARMT 132
Query: 145 KYETGKAGEITPIAIGGTAGVGVEVG 170
+T G+ + G AG+GVE
Sbjct: 133 FQDTVGFGDTSSF--GTFAGLGVEYQ 156
>gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301]
gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227]
gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str.
2457T]
gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301]
gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227]
gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70]
gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71]
gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671]
gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71]
gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6]
gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218]
gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272]
gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304]
gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227]
Length = 348
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196
G + + GVE ++ + RLEY+ + + + +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186
Query: 197 ISLGVGMKF 205
+SLGV +F
Sbjct: 187 LSLGVSYRF 195
>gi|163852164|ref|YP_001640207.1| porin [Methylobacterium extorquens PA1]
gi|240139496|ref|YP_002963971.1| putative outer membrane protein [Methylobacterium extorquens AM1]
gi|254561910|ref|YP_003069005.1| outer membrane protein [Methylobacterium extorquens DM4]
gi|163663769|gb|ABY31136.1| porin [Methylobacterium extorquens PA1]
gi|240009468|gb|ACS40694.1| putative outer membrane protein [Methylobacterium extorquens AM1]
gi|254269188|emb|CAX25154.1| putative outer membrane protein [Methylobacterium extorquens DM4]
Length = 285
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 66/247 (26%), Gaps = 62/247 (25%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSA 62
+ A+ + A +A AAD RR + P + G YAGL
Sbjct: 1 MIRALLLGGTAALVSTAALAADLPRRE----------APPIAFAPVPVFTWTGFYAGLHT 50
Query: 63 LYN--------------------------GSFGEEAHHNAGGSIFAGYNVED---SCIMY 93
Y S E + GYN + +
Sbjct: 51 GYAFTDNPNIQTRGNDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNHQFTPGGGFVA 110
Query: 94 GVEGDVRYTVPVLADNIHSL--------------HGIGGSLRIRGGYEVSDSLLLYATVG 139
G+ D + + G++ + GY D +Y T G
Sbjct: 111 GLAFDATWLDLDKRTGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAF-DRFFVYGTGG 169
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199
+ T G G ++ + +EY V+ F N S+
Sbjct: 170 LAFGHVSYGADFFNPGATVLQYT-GGGRKIFETGYNYGGGIEYAI----PVDSFLNYFSV 224
Query: 200 G--VGMK 204
G +G+K
Sbjct: 225 GRWLGIK 231
>gi|115524901|ref|YP_781812.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisA53]
gi|115518848|gb|ABJ06832.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisA53]
Length = 250
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 31/155 (20%)
Query: 48 PIRHDFNGPYAGLSALYNGS--------------FGEEAHHNAGG--SIFAGYNVEDSCI 91
+D++G Y G + + S E H +GG GY + S +
Sbjct: 34 APVYDWSGFYLGGNGGWGSSRKCWDFVDAAGSFLTSEGCHDASGGTAGGQLGYRWQASNL 93
Query: 92 MYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
++GVE + ++ + G+ + G ++L+ G +
Sbjct: 94 VFGVEAQGNWADFNGSNVSIAFPTVVNATKVDSFGTFTGQIGNAWGNTLVYLKAGGAVTS 153
Query: 144 Q---KYETGKAGEITPI----AIGGTAGVGVEVGG 171
Y T +I+ G G+GVE G
Sbjct: 154 DRYTGYLTSNGVQISDTVKDNRWGAVVGLGVEYGF 188
>gi|261213963|ref|ZP_05928244.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915570|gb|EEX82431.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 62
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 16/63 (25%)
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTISLGVG 202
G AG GV+ +++++ RLEYR + Y + + I LGV
Sbjct: 1 MTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVA 59
Query: 203 MKF 205
KF
Sbjct: 60 YKF 62
>gi|75675759|ref|YP_318180.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi
Nb-255]
gi|74420629|gb|ABA04828.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi
Nb-255]
Length = 258
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 54/187 (28%), Gaps = 34/187 (18%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF--------------GEEAHHNAGG--SIFA 82
T A + +D++G Y G + + S E H+ GG
Sbjct: 32 YTKAPPPMMAAIYDWSGFYIGANGGWGSSRNCWDFTTPAGVFVANEGCHNATGGTAGGQI 91
Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLL 134
GY + + ++G+E + + +S G + GY D+ LL
Sbjct: 92 GYRWQATNWLFGLEAQGNWADLSGRNVSLAFPAFTNNSNLNAFGLFTGQIGYAW-DATLL 150
Query: 135 YATVGPDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
Y G V + G GVG+E G + + EY
Sbjct: 151 YVKGGAAVTSNRYRSLVTATGVQATDSVNNNRWGAVVGVGLEY-GFAPNWSLAFEYDHIF 209
Query: 187 YSKVEGF 193
Sbjct: 210 MGNSRHT 216
>gi|213419602|ref|ZP_03352668.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 287
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G + G F GY V
Sbjct: 40 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 93
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DN + + G L + GY ++D L +Y +G A
Sbjct: 94 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 151
Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G T + G+E ++ + RLEY+ +
Sbjct: 152 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 194
>gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 371
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 78/231 (33%), Gaps = 59/231 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ G + G F GY V G E + Y P D
Sbjct: 52 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAG----EITPIAIG 160
NI+ + G L + GY ++D L +Y +G K G + +
Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGPGGASNKDHDTGVS 166
Query: 161 GTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
G+E ++ + RLEY+ + + + + +S+GV +F
Sbjct: 167 PVFAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 216
>gi|293395760|ref|ZP_06640042.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291421697|gb|EFE94944.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 352
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 35/194 (18%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFG-----------------EEAHHNAGGSIFA 82
+ + Y G ++ F + N G +FA
Sbjct: 15 AVTPAFAAADTGTW---YGGAKLGWSHYFDASADKDFSDNLDHATDFDFNKDNTTGGVFA 71
Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYAT 137
GY + VEG Y + + + + G + + + Y ++D+ LY
Sbjct: 72 GYQI---NSWLAVEGGYDYLGNMQINGNNGVAGAKLASQGLQLSMKASYGLTDNWDLYGR 128
Query: 138 VGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VE 191
G + + A VG E +++ R+EY+ S V
Sbjct: 129 AGAMAYRAETEHAGHSAFETGVRPLAAVGTEY-AFNDNWAGRVEYQWVSNVGNVNQIGVS 187
Query: 192 GFYNTISLGVGMKF 205
++++ GV +F
Sbjct: 188 ADVSSLTAGVVYRF 201
>gi|27381635|ref|NP_773164.1| hypothetical protein bll6524 [Bradyrhizobium japonicum USDA 110]
gi|27354803|dbj|BAC51789.1| bll6524 [Bradyrhizobium japonicum USDA 110]
Length = 271
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 31/163 (19%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--------------GYNVEDSCIMYGVE 96
++++G Y G + + S G G++ GY + + + G+E
Sbjct: 59 YNWSGFYIGANGGWGQSHGCVDFVTPAGTVAGGCADRSGGLAGGQIGYRWQTNQFVLGLE 118
Query: 97 GDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
+ + G + G+ + S L Y G V +
Sbjct: 119 AQGDWAEIKNTRVSLIDPLISTTGKTDAIGLFTAQLGWAWNAS-LFYVKGGAAVTRNRFD 177
Query: 149 -------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
GG GVG E G + + A +EY
Sbjct: 178 IFNNVTGVGLASAGHTRWGGALGVGWEY-GFAPNWSAGIEYDH 219
>gi|77463270|ref|YP_352774.1| outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77387688|gb|ABA78873.1| possible outer membrane protein [Rhodobacter sphaeroides 2.4.1]
Length = 200
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
D++G Y G Y + + + + A G + AGY + + G E T L
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
S +L++ G ++ LLYAT G A G G G+G +
Sbjct: 105 IPDSELDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159
Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205
+++ E R + S V+ T+ VG +F
Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200
>gi|126462144|ref|YP_001043258.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC
17029]
gi|126103808|gb|ABN76486.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC
17029]
Length = 200
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
D++G Y G Y + + + + A G + AGY + + G E T L
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
S +L++ G ++ LLYAT G A G G G+G +
Sbjct: 105 IADSELDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159
Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205
+++ E R + S V+ T+ VG +F
Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200
>gi|332558148|ref|ZP_08412470.1| outer membrane protein [Rhodobacter sphaeroides WS8N]
gi|332275860|gb|EGJ21175.1| outer membrane protein [Rhodobacter sphaeroides WS8N]
Length = 200
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
D++G Y G Y + + + + A G + AGY + + G E T L
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
S +L++ G ++ LLYAT G A G G G+G +
Sbjct: 105 IADSEVDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159
Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205
+++ E R + S V+ T+ VG +F
Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200
>gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
Length = 389
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 82/225 (36%), Gaps = 43/225 (19%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY-AG 59
+K+ ++ALA F + AQAA Y + ++G +
Sbjct: 39 RKMKNTAIALAVALAGFATLAQAA---------------PRDNTWYAGAKVGWSGYHDTL 83
Query: 60 LSALYNGSF-GEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHS 112
++ Y G G G F GY + G+E G + Y+ V +
Sbjct: 84 MNHTYKGVGDGSTRKDQLGAGAFLGYQINQ---YLGLEMGYDWFGRMHYSGDVKNGAFKA 140
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV------G 166
HG+ L + Y V + L +Y +G + + TG G+ GV G
Sbjct: 141 -HGVQ--LAAKLSYPVLEDLDVYTRLGGMLWRADSTGNLGDPRKKIRDYDIGVSPVAAVG 197
Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNT------ISLGVGMKF 205
+E L+++ V RL+Y+ E T +SLGV +F
Sbjct: 198 LEY-ALTQNWVTRLDYQFVNNMGDEATLGTRPDNTNLSLGVAYRF 241
>gi|221639135|ref|YP_002525397.1| outer membrane protein [Rhodobacter sphaeroides KD131]
gi|221159916|gb|ACM00896.1| outer membrane protein [Rhodobacter sphaeroides KD131]
Length = 200
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
D++G Y G Y + + + + A G + AGY + + G E T L
Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
S +L++ G ++ LLYAT G A G G G+G +
Sbjct: 105 IPDSEVDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159
Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205
+++ E R + S V+ T+ VG +F
Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200
>gi|213580658|ref|ZP_03362484.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 296
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G + G F GY V
Sbjct: 40 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 93
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DN + + G L + GY ++D L +Y +G A
Sbjct: 94 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 151
Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G T + G+E ++ + RLEY+ +
Sbjct: 152 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 194
>gi|332561456|ref|ZP_08415769.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N]
gi|332273958|gb|EGJ19276.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N]
Length = 160
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 16/167 (9%)
Query: 47 VPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103
D++G Y G Y N + A G + AGY + + G E +
Sbjct: 2 AAPVTDWSGFYVGGQLGYGDINTDIDGYDGNGAIGGVHAGYRYDFGRAVVGAELAYDISN 61
Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163
+ D L + +L++ G ++ LLYATVG A + G
Sbjct: 62 IEIGDADDELDNL-ATLKLMAGGKI-GRGLLYATVGGTWADVSSDAGDPDD-----GYVY 114
Query: 164 GVGVEVGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205
G+G + L++ E R + + + T+ VG +F
Sbjct: 115 GIGYD-HMLNDRWSIGAELLRHTWDSFDDAGTDADATTLQAKVGFRF 160
>gi|170694344|ref|ZP_02885498.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
gi|170140767|gb|EDT08941.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
Length = 172
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 55/174 (31%), Gaps = 30/174 (17%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94
A F GPY G N G+F + +H+ AGYN + + G
Sbjct: 20 PCAQAAPQAGASQFAGPYVGFKLGVNNSDASGAFNKASHNTVFPGFTAGYNFDVQRFVVG 79
Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154
E + GI + G + + Y G G+
Sbjct: 80 AEA---FADLHHGSTTFKDAGID----AKFGMPF-NQFMPYIRAG----------FTGDD 121
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
G+GV+ +E + A E+ + S +G N+ ++GV F
Sbjct: 122 PDTRFHW--GLGVDY-KFAEHVSAVAEWT-TDSSHHDGTKRTNNSFTVGVQYHF 171
>gi|323138001|ref|ZP_08073075.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
gi|322396720|gb|EFX99247.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
Length = 702
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 47/188 (25%), Gaps = 59/188 (31%)
Query: 50 RHDFNGPYAGLSAL---------------------YNGSFGEEAHHNAGGSIFAGYNVED 88
++ G Y G S Y+ GYN +D
Sbjct: 25 VFNWVGMYLGASLGAAFPLHGGERLQAGSGFGSPVYDLYPAGATRPGVTVGAQVGYNWQD 84
Query: 89 SCIMYGVEGDVRYTVPVLADNIH-------------------SLHGIGGSLRIRGGYEVS 129
++G E D+ N S S+R R G+
Sbjct: 85 GPWVWGFETDLSLLDGRRGPNGLFASSDAYAPGLPVYTLHPGSSANYFASIRGRVGFAY- 143
Query: 130 DSLLLYATV---------------GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
D LLY T G D + + + G G E ++
Sbjct: 144 DRALLYLTGGVAAGGARGPETLTLGADGPDAIFEAPWSQSS--RMKYVFGAGFEY-AFAD 200
Query: 175 SLVARLEY 182
+ AR EY
Sbjct: 201 NWSARAEY 208
>gi|90424260|ref|YP_532630.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisB18]
gi|90106274|gb|ABD88311.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisB18]
Length = 251
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 31/155 (20%)
Query: 48 PIRHDFNGPYAGLSALYNGSF--------------GEEAHHNAGG--SIFAGYNVEDSCI 91
+ ++G Y G + + S E H GG GY + + +
Sbjct: 34 APVYGWSGFYLGGNGGWGSSRKCWDFVNAAGSFLSSEGCHDATGGTAGGQVGYRWQAANM 93
Query: 92 MYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
++GVE + ++ + G + G ++L+ G +
Sbjct: 94 VFGVEAQGNWADFNGSNISVAFPTVVNATKVDSFGLFTGQIGNAWGNTLVYLKAGGAVTS 153
Query: 144 QKY-------ETGKAGEITPIAIGGTAGVGVEVGG 171
+Y + + G G+GVE G
Sbjct: 154 DRYTGYLTSNGVQISDAVKDTRWGAVVGLGVEYGF 188
>gi|300023262|ref|YP_003755873.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525083|gb|ADJ23552.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC
51888]
Length = 240
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 27/149 (18%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR------------YTVPVLADNIHSLH-- 114
+ + N G + N + GV D Y N+
Sbjct: 59 TDSSSTNWNGGLTVAANWRLQNAVIGVAVDYDPFGSTQGLGCLYYWSDGGQSNVFVSDVQ 118
Query: 115 --------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITPIAIGGT 162
S + G+ VS + +Y G V++ + ++ G T
Sbjct: 119 SGRCTRDVAWSASFVGKIGWLVSPTTWVYGLGGWTVSRVEQNFEKSFNLEQVHATLDGAT 178
Query: 163 AGVGVEVGGLSESLVARLEYRASKYSKVE 191
G G+E L+E+ +E R +K + VE
Sbjct: 179 FGGGIEYR-LTENWHVNVELRYTKLNTVE 206
>gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC
35316]
gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316]
Length = 358
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 78/220 (35%), Gaps = 39/220 (17%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA Y + ++ +
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGGKLGWSQFH--D 49
Query: 61 SALYNGSF---GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSL 113
+ YN S G G F GY V G E + Y P DN++
Sbjct: 50 TGWYNSSLNNDGPTHESQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDNVNGA 104
Query: 114 HGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGVEVGG 171
G L + GY V+D L +Y +G V + + AG+ + GVE
Sbjct: 105 FKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSNSIAGDDHDTGVSPVFAGGVE-WA 163
Query: 172 LSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205
++ + RLEY+ + V +S+GV +F
Sbjct: 164 MTRDIATRLEYQWVNNIGDGATVGVRPDNGMLSVGVSYRF 203
>gi|157376762|ref|YP_001475362.1| OmpA domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157319136|gb|ABV38234.1| OmpA domain protein transmembrane region-containing protein
[Shewanella sediminis HAW-EB3]
Length = 184
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 6/135 (4%)
Query: 49 IRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
+D G Y G S ++ G + GYN +G+E ++ + +
Sbjct: 22 AANDHTGFYVGGSLGQLKLKAGDSESGVGIGAYGGYNF---NEWFGLEANMFVSGDLGDS 78
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGV 167
G + + Y++ D+ +Y VG G GVGV
Sbjct: 79 RTDLGAGTF-AFTPKFTYQIDDTFSVYGKVGIASMAVVARPDYLRNEDFTGFGWAYGVGV 137
Query: 168 EVGGLSESLVARLEY 182
+E+L RL Y
Sbjct: 138 NASM-TENLNIRLGY 151
>gi|77404769|ref|YP_345342.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77390419|gb|ABA81601.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1]
Length = 250
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 71/209 (33%), Gaps = 48/209 (22%)
Query: 32 HGGRGVVPTIATNRYVPIR--HDFNGPYAGLSALY-----NGSFGEEAHHNAGGSIF--- 81
GG VVP A + +D++G + G Y + S + G++
Sbjct: 23 AGGPIVVPMEAPVTALAPSGTYDWSGFWIGGGLGYGSTNYDISGDADLAEGQSGALELPD 82
Query: 82 -----------AGYNV----------EDSCIMYGVEGDVRYTVPV-----LADNIHSLHG 115
AGY + ++ D ++ + +I
Sbjct: 83 LGGQGGLLSLEAGYAYALAPRWILAGQLDYAFGNIDNDADLSLDGELSLDASYDIKVKSM 142
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-------ETGKAGEITPIAIGGTAGVGVE 168
+ G+ R GY SD+ ++Y G A+ T + + G T G G+E
Sbjct: 143 MAGT--ARLGYLPSDTTMIYGLAGLTRAKFEADYSVSGVTSGGYDFSDT--GLTIGAGME 198
Query: 169 VGGLSESLVARLEYRASKYSKVEGFYNTI 197
L+E + +LEYR +K+ F +
Sbjct: 199 TR-LTEKIGLKLEYRYTKFDDYTIFDGNV 226
>gi|91978374|ref|YP_571033.1| hypothetical protein RPD_3911 [Rhodopseudomonas palustris BisB5]
gi|91684830|gb|ABE41132.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 264
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 60/177 (33%), Gaps = 42/177 (23%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV----------RYTVPVLADNI-------- 110
G + G F GYN + ++ G+E + Y + + N
Sbjct: 90 GTTSSRGQGYGGFVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRMFSSNNVPYDVDYT 149
Query: 111 -HSLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------------- 152
+ + GS R+R G+ S L YA G + Q A
Sbjct: 150 ASASIKVNDVGSARLRAGWAF-GSFLPYAFGGVALGQADIIRTAMISGTQNGVRFTPLVS 208
Query: 153 ---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205
+ G + G+G++ + L R E+ K++ + +T+ GVG KF
Sbjct: 209 NQIQNGHFIYGYSGGLGID-MMVYRGLFVRAEWEYQKFAAPINTAVSTVRAGVGYKF 264
>gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a]
Length = 327
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 63/183 (34%), Gaps = 33/183 (18%)
Query: 47 VPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
P + + Y G ++ G + G F GY V G E
Sbjct: 1 APKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE-- 52
Query: 99 VRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKA 151
+ Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 53 MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPG 112
Query: 152 G---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVG 202
G + + GVE ++ + RLEY+ + + + + +SLGV
Sbjct: 113 GASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVS 171
Query: 203 MKF 205
+F
Sbjct: 172 YRF 174
>gi|289809683|ref|ZP_06540312.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 264
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 24/148 (16%)
Query: 57 YAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----P 104
YAG ++ + G + G F GY V G E + Y P
Sbjct: 5 YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMP 59
Query: 105 VLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IA 158
DN + + G L + GY ++D L +Y +G A G T
Sbjct: 60 YKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTG 119
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASK 186
+ G+E ++ + RLEY+ +
Sbjct: 120 VSPVFAGGIEY-AITPEIATRLEYQWTN 146
>gi|7188820|gb|AAF37888.1|AF234270_1 outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 249
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + G+E ++ + RLEY+ +
Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170
>gi|126668019|ref|ZP_01738983.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17]
gi|126627529|gb|EAZ98162.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17]
Length = 211
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 29/190 (15%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNA----------GGSIFAGYNVEDSCI 91
A G Y G +N + E + N+ G+ FAGY +
Sbjct: 19 APMASAAPTVTATGFYLGAQTGWNDTTLEGSSSNSLVEGNSASGVSGAAFAGYQAKIPNG 78
Query: 92 MYGVEGDVRYTVPVLADNIHSL-----HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ-- 144
+ +E + + + + + R G +++ S Y VG
Sbjct: 79 ILAIEVNAGASSAEFEKTETAARQLITSDMSYGISARLGTDIARSTQFYGLVGYQSTDFE 138
Query: 145 --KYETGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS-----KYSKVEGF 193
++ + + + G + G G++ ++++L R+++ + + ++
Sbjct: 139 LTLEDSTPGSVANFKDSKSSAGASIGFGIQAQ-ITDALAMRVQWTRTLHDEKTFGDLKLD 197
Query: 194 YNTISLGVGM 203
+T + +G+
Sbjct: 198 PSTSQVSIGV 207
>gi|170750855|ref|YP_001757115.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans
JCM 2831]
gi|170657377|gb|ACB26432.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans
JCM 2831]
Length = 210
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 69/194 (35%), Gaps = 17/194 (8%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
++L + + + L AA + G + + G YA LS
Sbjct: 11 RRLAAGLVLGACWLP--AGPAAAQALFWPSIGFAPLPSFAWPQMPEDAYGRWTGSYARLS 68
Query: 62 ALYNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRY------TVPVLADNIHSL 113
Y S +G ++ G ++ I+YG+ G Y + +
Sbjct: 69 TGYAVSTSRHFGSYSGPTVGFEGGRMWQEGPILYGISGGFDYLAGLGGNLTPGYGRLAYS 128
Query: 114 HGIGGSLRIRGGYEVSDSLLLYA-TVGPDVAQKYETGKAG-----EITPIAIGGTAGVGV 167
+ GSL ++ G V+ +L+YA T + Q G IA+ AGVGV
Sbjct: 129 NDFAGSLEVKVGTLVAPDVLVYAKTGALALHQTLRVGPTPGSLPFTRQDIAVRPVAGVGV 188
Query: 168 EVGGLSESLVARLE 181
E +++ L +E
Sbjct: 189 E-WAVTDRLSLAVE 201
>gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 362
Score = 49.3 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 77/220 (35%), Gaps = 39/220 (17%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA Y + ++ +
Sbjct: 10 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGGKLGWSQFH--D 52
Query: 61 SALYNGSF---GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSL 113
+ YN G + G F GY V G E + Y P D ++
Sbjct: 53 TGWYNDDLNNNGPTHNSQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDKVNGA 107
Query: 114 HGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGVEVGG 171
G L + GY ++D L +Y +G + + + AG+ + GVE
Sbjct: 108 FKAQGVQLTAKLGYPITDDLDIYTRLGGMIWRADSSNSIAGDNHDTGVSPLVAGGVE-WA 166
Query: 172 LSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205
++ + RLEY+ + V +SLGV +F
Sbjct: 167 ITRDIATRLEYQWVNNIGDAGTVGVRPDNGMLSLGVSYRF 206
>gi|146342734|ref|YP_001207782.1| hypothetical protein BRADO5904 [Bradyrhizobium sp. ORS278]
gi|146195540|emb|CAL79567.1| hypothetical protein with a putative signal peptide; putative
pertactin (N-terminal) and outer-membrane immunogenic
protein (C-terminal) [Bradyrhizobium sp. ORS278]
Length = 603
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 49/184 (26%), Gaps = 58/184 (31%)
Query: 78 GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNI----------------HSLHGIGGSL 120
G GYN + ++GVEGD+ A + S
Sbjct: 413 GGGQVGYNYQFAGSWVFGVEGDIGAANIHGARTVGNQAFGAGLTSAYFVAEDKTNWVASA 472
Query: 121 RIRGGYEVSDSLLLYATVGPD-------------------------VAQKYETGKAGEIT 155
R GY + L Y G + +G I+
Sbjct: 473 TARLGYGL-GRTLWYVKGGAAFEDGRTTATCYNPNGVAIGSVCNNAAGVVFASGTGFGIS 531
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------------NTISLGV 201
+G T G G E L + A+ EY + + + + +G+
Sbjct: 532 NTRVGWTIGYGTEFD-LGRNWSAKAEYDYLSFGRYRALSSDGTTTLSAKADSISQVKIGL 590
Query: 202 GMKF 205
+F
Sbjct: 591 NYRF 594
>gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032]
gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032]
Length = 355
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 74/223 (33%), Gaps = 51/223 (22%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + YAG
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGG 40
Query: 61 SALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108
++ + G G F GY V G E + Y P D
Sbjct: 41 KLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVG 166
++ G L + GY V+D L +Y +G V + + G+ + G
Sbjct: 96 TVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSSNIGGDDHDTGVSPVFAGG 155
Query: 167 VEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
VE ++ + RLEY+ V + L VG+ +
Sbjct: 156 VE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVGVSY 197
>gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103]
gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103]
Length = 367
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 75/227 (33%), Gaps = 47/227 (20%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----G 55
+K+ ++ALA F + AQAA Y + ++ G
Sbjct: 9 RKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQYHDTG 53
Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIH 111
Y Y + G G FAGY + G E + Y P + ++
Sbjct: 54 YY---GNGYQNNDGPTHESQLGAGAFAGY---QANPYLGFE--LGYDWLGRMPNKGNQVN 105
Query: 112 SLHGIGG-SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAG---EITPIAIGGTAG 164
G L + Y ++D L +Y +G + G + A
Sbjct: 106 GAFKAQGIQLAAKLSYPIADDLDIYTRLGGMVWRADSTQQNLATGTRISDHDTGVSPLAA 165
Query: 165 VGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
VGVE L+++ RL+Y+ V + +SLGV +F
Sbjct: 166 VGVEY-ALTKNWATRLDYQWVNNIGDAQTVGARPDNGMLSLGVSYRF 211
>gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894]
gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894]
Length = 358
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 27/183 (14%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G G F GY V
Sbjct: 27 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPY 80
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
G E + Y P D ++ G L + GY V+D L +Y +G V +
Sbjct: 81 VGFE--MGYDWLGRMPYKGDTVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADS 138
Query: 148 TGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVG 202
+ G+ + GVE ++ + RLEY+ V + L VG
Sbjct: 139 SSNIGGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVG 197
Query: 203 MKF 205
+ +
Sbjct: 198 VSY 200
>gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 356
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 75/217 (34%), Gaps = 35/217 (16%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA Y + ++ +
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQFHDIG 51
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGI 116
+ + + G G F GY V G E + Y P +
Sbjct: 52 NNRIDNN-GPTHESQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGSEQNGAFKA 105
Query: 117 GG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSE 174
G L + GY ++D L +Y +G V + G + + GVE ++
Sbjct: 106 QGVQLTAKLGYPITDDLDVYTRLGGMVWRADAKNNDGFKDHDTGVSPVFAGGVEY-AITP 164
Query: 175 SLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
+ RLEY+ + + V G + +S+GV +F
Sbjct: 165 EIATRLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 201
>gi|77748528|ref|NP_640827.2| membrane protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 279
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 27/166 (16%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112
A + + GG+ + GY+ + +YGV + + + S
Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSVSAFSTTPA 139
Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156
+LR R GY L Y T G +
Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANSFTSSGGD 199
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
A G AG+G++ LS+ + +EY ++ + + +G G
Sbjct: 200 SADGYQAGIGLQ-RRLSDKVSVGVEYLFTRLQDDDT---RVRVGPG 241
>gi|149201160|ref|ZP_01878135.1| possible outer membrane protein [Roseovarius sp. TM1035]
gi|149145493|gb|EDM33519.1| possible outer membrane protein [Roseovarius sp. TM1035]
Length = 197
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 15/142 (10%)
Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLA 107
++ G YAG Y + G + AGY+ + + G+ D + L
Sbjct: 46 NWTGFYAGGQLGYGDVDTGAAGVDGDGLIGGLIAGYDYDYGNNWVVGLGLDYDFADIDLG 105
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167
++ R GY+V + LLY T G A +T G+ G G G
Sbjct: 106 AAASLEDVFR--IKSRLGYKVGNG-LLYGTGGYAWA---DTDTLGDD----NGYFFGAGY 155
Query: 168 EVGGLSESLVARLEYRASKYSK 189
E +S++L E K+
Sbjct: 156 E-HMISQNLSLGGEVLYHKFEN 176
>gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 352
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 16/138 (11%)
Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHS 112
YA + GS + +F GYNV + +EG YT + D H
Sbjct: 46 YAAGTYGNPGSEYRIDRDDFAAGLFMGYNVTP---WFAIEG--GYTWLGEVTLKGDKYHD 100
Query: 113 LHGIGGSLRIRGG---YEVSDSLLLYATVG--PDVAQKYETGK-AGEITPIAIGGTAGVG 166
+ G Y+ +D + LY VG + ++ TAG+G
Sbjct: 101 QGKVEQQAIDLVGKFTYQATDKVDLYTKVGGAWQFTRSKGLPGQTTTDRDDSLIATAGLG 160
Query: 167 VEVGGLSESLVARLEYRA 184
E +++L AR EY+
Sbjct: 161 AEYH-FTDNLSARAEYQY 177
>gi|90414598|ref|ZP_01222571.1| hypothetical protein P3TCK_14434 [Photobacterium profundum 3TCK]
gi|90324314|gb|EAS40883.1| hypothetical protein P3TCK_14434 [Photobacterium profundum 3TCK]
Length = 182
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 28/184 (15%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGD 98
TIA+ P +G Y G N + + G + AGYN + I+ GVEG+
Sbjct: 9 TIASLLSAPALASKDGFYIGTDLGSNRL--DSESFDTGIGLVAGYNFQITQQIVIGVEGE 66
Query: 99 VRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYETGKA 151
R D + + G L+ + Y +D+ YA + E K
Sbjct: 67 YR---SYGKDKVTIIDGWSAELKAHSFGINVKPKYYFNDNF--YAGAQLGLHSVKEEFKE 121
Query: 152 G--------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS--KVEGFYNTISLGV 201
+ + G + ++++ + Y+A V+ Y+T +G
Sbjct: 122 DILGDVEKFSDSDTGLSYGLEAGYD---FNQNVTIKAGYKAISVEPLGVDSDYSTFYIGA 178
Query: 202 GMKF 205
KF
Sbjct: 179 NYKF 182
>gi|332188913|ref|ZP_08390616.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17]
gi|332011053|gb|EGI53155.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17]
Length = 285
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 20/128 (15%)
Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHS----------LHGIGGSLRIRGGYEVSDSL 132
G + + I+YGV G+ + + + S S R R GY ++
Sbjct: 114 GLDHQAGNIVYGVVGEFGKSEITDSVSAFSTTPAWYTMTRSIDWEASARGRLGYA-ANKT 172
Query: 133 LLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
L Y T G A+ A G G G+E + + +EY
Sbjct: 173 LFYGTFGAGYARINREFATSNGANAFAISGDRNQFGFLGGGGIE-QKIGRNFSIGMEYMY 231
Query: 185 SKYSKVEG 192
+Y +
Sbjct: 232 HQYRDDDT 239
>gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 27/183 (14%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
G E + Y P D ++ G L + GY V+D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGDTVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADS 127
Query: 148 TGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVG 202
+ G+ + GVE ++ + RLEY+ V + L VG
Sbjct: 128 SSNIGGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVG 186
Query: 203 MKF 205
+ +
Sbjct: 187 VSY 189
>gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 355
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 15/142 (10%)
Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR-----IRGGYE 127
+ GG F GY + +S +G+E + T A + + G + + Y
Sbjct: 74 RTDLGGGFFVGYQINES---WGIE--LGKTFLGAAKAEYFSRKVTGDMETIDLFGKYTYG 128
Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA--- 184
++D + G E T + G G + L++ + +LEY+
Sbjct: 129 LTDRFGFFGKAGLANWNGKTKSDYVETTTFGHDLSVGFGAQY-ALNKRWLTQLEYQYINS 187
Query: 185 -SKYSKVEGFYNTISLGVGMKF 205
+ E Y+ +S+G+ +F
Sbjct: 188 IGDDTVGESDYHLMSIGIIYRF 209
>gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 326
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 33/167 (19%)
Query: 57 YAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
Y G A + S E N G +FAGY V + +E +
Sbjct: 27 YIGARAGASFLTNMDDAVTSVSEIQDTNFTGGVFAGYQVTP---WFALETGYTHLGNAKL 83
Query: 108 DNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAIG 160
DN + G+ L + Y +SD++ ++A G + G
Sbjct: 84 DNKQGSYEAQGADLVTKFSYAISDNVDIFAKAGAFYYDWNAIGSGVIKSD--------NG 135
Query: 161 G--TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
TAG G+E +++S RLEY+ Y+ V G G+G+ F
Sbjct: 136 WSSTAGAGLEY-FINKSFSTRLEYQY--YNDVAGPDIHF-AGLGLAF 178
>gi|119387700|ref|YP_918734.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222]
gi|119378275|gb|ABL73038.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222]
Length = 416
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 37/164 (22%)
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119
A + +FAGY + + + G+E N +L +GG+
Sbjct: 271 EAWTEQLTDSFSEDGNSYGLFAGYRRQWQNNFVGGIEVHYGRN----GSNRFNLAELGGT 326
Query: 120 LRI---------RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
++ + GY + L Y VG + T +G++
Sbjct: 327 VQFGKDTYGAELQAGYAIK-RALPYIAVGYA--NILDQDAM----------TVSLGLDY- 372
Query: 171 GLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205
+++ L+ +Y + G N +SL +KF
Sbjct: 373 AVTDRLIVGAKYTHYDIGDISGIDSIHRFEGDGNMVSLRAAIKF 416
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSAL 63
+ +AL + A P + + P I+ V + GPY G
Sbjct: 1 MSNRIALILAATTFLASPAFSGGYVAPVIQPQISPVVEVARPAFSWTGPYVGAYIG 56
>gi|148255369|ref|YP_001239954.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146407542|gb|ABQ36048.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 262
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 67/235 (28%), Gaps = 53/235 (22%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+KL LAV + +A AAD R P P+ + G Y
Sbjct: 1 MKKLLLAVTAMAAMTG---TASAADLAAR---------PYTKAPIAAPLAPSWTGFYIFG 48
Query: 61 SALYNGSFGEEAHHNAG------------------GSIFAGYNVE-DSCIMYGVEGDVRY 101
+ ++ G++ AGY+ + + + G D ++
Sbjct: 49 GGGGGLWNADTTINSTATGAALIGLNQKQGGEGWFGTVGAGYDWQVNPTWVIGAFADGQF 108
Query: 102 TVPVLADNIHS-------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----- 149
+ ++ R GY V+ ++L Y G + T
Sbjct: 109 GSIKGTIQDQGALIAGNIKNDYSWAVGGRVGYLVAPNVLSYVNAGYSSSHWKGTTLLSTV 168
Query: 150 -----KAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGFY 194
G G GVE G + + EYR++ Y +
Sbjct: 169 TGGASGLHTDGFDRSGWFIGGGVENNLNIFGISAPGWFMKTEYRSAFYDRKNISE 223
>gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280]
gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280]
Length = 370
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 57 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 169
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 170 GGVEY-AITPEIATRLEYQWTN 190
>gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 359
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 71/216 (32%), Gaps = 31/216 (14%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY-AG 59
QK+ ++ALA F + AQAA Y + ++ + G
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGGKLGWSQFHDTG 51
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG- 118
N + G G F GY V G E + + +
Sbjct: 52 WYNSANNNDGPTHESQLGAGAFGGYQV---NPYVGFEMGYDWLGRMPYKGNETNGAFKAQ 108
Query: 119 --SLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIAIGGTAGVGVEVGGLSES 175
L + GY V+D L +Y +G V + AG+ + GVE ++
Sbjct: 109 GVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSNSNAGDDHDTGVSPVFAGGVE-WAMTRD 167
Query: 176 LVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205
+ RLEY+ + V +S+GV +F
Sbjct: 168 IATRLEYQWVNNIGDGATVGVRPDNGMLSVGVSYRF 203
>gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89]
gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89]
gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
Length = 375
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 28 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 61
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 62 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 116
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 117 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 174
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 175 GGVEY-AITPEIATRLEYQWTN 195
>gi|294627228|ref|ZP_06705815.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294667706|ref|ZP_06732918.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292598467|gb|EFF42617.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292602546|gb|EFF45985.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 279
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 27/166 (16%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112
A + + GG+ + GY+ + +YGV + + + S
Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSVSAFSTTPA 139
Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156
+LR R GY L Y T G +
Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANSFTSSGGD 199
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
A G AG+G++ LS+ + +EY ++ + + +G G
Sbjct: 200 SADGYQAGIGLQ-RRLSDKVSVGVEYLFTRLQDDDT---RVRVGPG 241
>gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 27/183 (14%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
G E + Y P D ++ G L + GY V+D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGDTVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADS 127
Query: 148 TGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVG 202
+ AG+ + GVE ++ + RLEY+ V + L VG
Sbjct: 128 SSNIAGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVG 186
Query: 203 MKF 205
+ +
Sbjct: 187 VSY 189
>gi|154252136|ref|YP_001412960.1| OmpA domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154156086|gb|ABS63303.1| OmpA domain protein transmembrane region-containing protein
[Parvibaculum lavamentivorans DS-1]
Length = 184
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 26/202 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + + +AL A AA G + P G Y G
Sbjct: 8 MKTALRTICAAGVALGLAGFASAASAQETETRGNIYN-----QTHFQP------GLYVGG 56
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ S ++ G AG+ + + G D+ + + S G+
Sbjct: 57 GLGWGWSDDDDDWTWKG---IAGWRLNQYLAVQGFYADL---TDITVAGVSSDVDTFGA- 109
Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
+ + VSD++ +Y G Y+ +G T AG GV+ LS+++ R
Sbjct: 110 ELLASFPVSDTMAIYGKGGL---HNYDEVGSGRDTS----WLAGAGVDF-ALSDNMSLRT 161
Query: 181 EYRASKYSKVEGFYNTISLGVG 202
E+ + ++ + G
Sbjct: 162 EWTHYDLDSDDVDEASVQIVFG 183
>gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C]
Length = 365
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 52 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 164
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185
>gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101]
gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101]
Length = 365
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 52 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 164
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185
>gi|241761569|ref|ZP_04759656.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373877|gb|EER63410.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 270
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 43/233 (18%)
Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71
+ A Q A V + V P T + + + GL + +
Sbjct: 41 TSASDGSAPVQDAPVVAQDTVAQPAVQPVPLTPDPNEVANHSGIKFRGLRVEGDIGWTRA 100
Query: 72 AHHNAGGSIFAGYN-------VEDSCIMYGVEG-----------DVRYTVPVLADNIHSL 113
++ G GY V D+ ++GVEG + + + + +
Sbjct: 101 QANHTTGRNNMGYGGTLGVDAVVDNFFVFGVEGSYWNPSKMWEKNAGNNIALGSQGNNIG 160
Query: 114 H-------------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI--- 157
+LR G+ + LL+Y G ++ G
Sbjct: 161 QIGTDSYSARKMFQEWDATLR--MGFLPTKDLLIYMAGGYASGKQRNVSVNGAGVAAPNS 218
Query: 158 -----AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ G + G G+E ++++ +YR +++ + +LG G +F
Sbjct: 219 KYVGWSNGYSVGGGIEYS-ITKNFFMNAQYRWTQFGNHTS-RSRATLGFGFRF 269
>gi|329851836|ref|ZP_08266517.1| membrane protein [Asticcacaulis biprosthecum C19]
gi|328839685|gb|EGF89258.1| membrane protein [Asticcacaulis biprosthecum C19]
Length = 278
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 61/205 (29%), Gaps = 66/205 (32%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYN----------------GSFGEEAHHNAGGSIF---- 81
A D+ GPY G++A + G++G+ + AG + F
Sbjct: 17 AAGAPAAWSQDWAGPYVGVAAGMSNIADDNETVEFDTNLDGAYGDTVNTFAGANAFSPGF 76
Query: 82 --------------------------AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG 115
AGY+ + ++GV G+V + S
Sbjct: 77 CTGAANGRTPGEGCAKQREEAGIGLRAGYDWQVGNWVFGVVGEVTNANFEDSVTAFSTTP 136
Query: 116 IG----------GSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPI 157
+LR + GY + D +Y T G A
Sbjct: 137 ANYVFTRDIENINALRGKAGYVMGD-WQVYLTAGYAQADIERTFRTSNALNSFTATDGDD 195
Query: 158 AIGGTAGVGVEVGGLSESLVARLEY 182
+ G G+G+E +S + +EY
Sbjct: 196 SDGYQVGLGIE-QRISGRWIGGIEY 219
>gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 348
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 30/176 (17%)
Query: 57 YAGLSALYNGSFGEEAH-----------------HNAGGSIFAGYNVEDSCIMYGVE--- 96
YAG ++ F A N GG +F GY + + G
Sbjct: 29 YAGGKFGWSHYFDTSASQQTGANGNKYGDVGFDSDNVGGGVFTGYQITPWLAVEGGYDYL 88
Query: 97 GDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
G++++ A G+ SL+ Y ++D+ LY G + K
Sbjct: 89 GNMQFNGKNGASGSQMKSQGLQLSLKA--SYGLTDNWDLYGRAGAMGYRAESDIKGNNRF 146
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205
+ VG E +++ R+EY+ S V ++++ G+ +F
Sbjct: 147 DTGVRPVVAVGTEY-AFNKNWAGRVEYQWVSNVGNENQIGVSSDVSSVTAGLSYRF 201
>gi|209886341|ref|YP_002290198.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5]
gi|209874537|gb|ACI94333.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5]
Length = 113
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT------PIAIGGTAGVGVEVGGLS 173
+R + G+ V+ LL+YAT G A T + T + G G G EV
Sbjct: 1 MRGKAGFAVNPQLLIYATGGAAFAGTRATDTFIDGTHDITAKATSSGWVVGAGGEVKLAR 60
Query: 174 ESLVARLEYRASKYSKVEGFYNTISLGVG 202
+ EY + + +++ L G
Sbjct: 61 QVSFG-FEYLYADFGNKSYAFDSSHLSGG 88
>gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638]
gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein
[Enterobacter sp. 638]
Length = 351
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 65/189 (34%), Gaps = 33/189 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN------------GSFGEEAHHNAGGSIFAGYNVED 88
+ P + + YAG ++ + G G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGWYNSSLNNDGPTHESQLGAGAFGGYQV-- 70
Query: 89 SCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVA 143
G E + Y P DN++ G L + GY V+D L +Y +G V
Sbjct: 71 -NPYVGFE--MGYDWLGRMPYKGDNVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVW 127
Query: 144 QKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNT 196
+ + AG+ + GVE ++ + RLEY+ + V
Sbjct: 128 RADSSNSIAGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDGNTVGVRPDNGM 186
Query: 197 ISLGVGMKF 205
+S+GV +F
Sbjct: 187 LSVGVSYRF 195
>gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736]
gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736]
Length = 370
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 57 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 169
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 170 GGVEY-AITPEIATRLEYQWTN 190
>gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1]
gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1]
Length = 370
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 57 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 169
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 170 GGVEY-AITPEIATRLEYQWTN 190
>gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1]
gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1]
Length = 353
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+K+ ++ALA F + AQAA P + + Y G
Sbjct: 6 KKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 39
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 40 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 94
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 95 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 152
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 153 GGVEY-AITPEIATRLEYQWTN 173
>gi|254466120|ref|ZP_05079531.1| putative outer membrane protein [Rhodobacterales bacterium Y4I]
gi|206687028|gb|EDZ47510.1| putative outer membrane protein [Rhodobacterales bacterium Y4I]
Length = 180
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 11/156 (7%)
Query: 52 DFNGPYAGLSALYNG--SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109
D+ G Y G + + +A I AGYN + + G E D T L
Sbjct: 32 DWTGFYLGGQIGQLDVDATNGASGDDAAYGIHAGYNYDFGRFVLGGELDYDTTDVDLGGG 91
Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
++ GY+ + +L Y T G A + GE + + +
Sbjct: 92 ATVDSVARAKVKA--GYDFGN-VLAYVTGGVAEADSSLGSETGEFYGVGLAYQV---TDQ 145
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ + LE+ + + S+ + F
Sbjct: 146 WQIGGEV---LEHEFDDFGNSGVGADATSVSLRASF 178
>gi|220922127|ref|YP_002497428.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946733|gb|ACL57125.1| porin [Methylobacterium nodulans ORS 2060]
Length = 284
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 53/180 (29%), Gaps = 54/180 (30%)
Query: 53 FNGPYAGLSALYNGS---------------------------FGEEAHHNAGGSIFAGYN 85
+ G YAGL Y + F E G F GYN
Sbjct: 42 WTGFYAGLHTDYVFTDRTRITTVGNTAVNAAAVAGLVRAPRIFTEVDGFANIGGGF-GYN 100
Query: 86 VED---SCIMYGVEGDVRYTV------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130
+ S ++ GV+ D +T PV G G+L R GY D
Sbjct: 101 YQFTPGSGVVVGVQADWAWTDLEKNRGYLSPTVPVFGSAYRQGLGWLGTLVGRAGYAF-D 159
Query: 131 SLLLYATVGPDVAQ----------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
+Y G G+IT G G G+E +S +ARL
Sbjct: 160 RFFVYGLGGLAYGDVTTGATFFNPGGVVAYTGQITDFRTGFAYGGGIEYAIPDDSFLARL 219
>gi|312115944|ref|YP_004013540.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC
17100]
gi|311221073|gb|ADP72441.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC
17100]
Length = 292
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 54/162 (33%)
Query: 46 YVPIRHDFNGPYAGLSAL-------------------------------------YNGSF 68
V + G Y G + + +
Sbjct: 37 EVIPVQTWTGFYLGGNVGGAFVDNNNKNRWDDGEGPWHNVWEKVDHKWTEVPVSDVDHFW 96
Query: 69 GEEAHHN--AGGSIFAGYNVED--SCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRG 124
G +++ G + AG+N + S ++ G E D ++ V S R +
Sbjct: 97 GNRNNNDSQFIGGVQAGFNWQRVGSPLVVGFEVDADFSDNV---------DYLVSARGKL 147
Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
G+ + +LLYAT G K G G T+G G
Sbjct: 148 GFGFQN-VLLYATGGGAWIGLNNDNKFGYDDT---GWTSGWG 185
>gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146]
Length = 365
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 52 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 164
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185
>gi|307295040|ref|ZP_07574882.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
gi|306879514|gb|EFN10732.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
Length = 170
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 10/154 (6%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH 111
F GP AG+ Y+ G + + GY++ I +G E V
Sbjct: 26 FTGPRAGVIGGYDKLGG---NDGFTYGVSTGYDLAVTPNITFGPEVSFS-DTTVGGGGAE 81
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+ S+R GY V+ +L + VG + + + G G G+E
Sbjct: 82 ISRDLAASVR--LGYVVNPRVLAFGKVGYANTRIEASNSNTGAS--FEGVRYGGGIEF-A 136
Query: 172 LSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
++ S EY+ S+Y G + +G+G +F
Sbjct: 137 VTGSTYISAEYQRSEYEDGIGGRDAGVVGIGFRF 170
>gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739]
gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B]
gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736]
gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli ATCC 8739]
gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101]
gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89]
gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW
07815]
Length = 365
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 52 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 164
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185
>gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895]
gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 31/215 (14%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA Y + ++ +
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQFHDVG 51
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS- 119
+ + + G G F GY V G E + +
Sbjct: 52 NNQIDNN-GPTHESQLGAGAFGGYQV---NPYVGFEMGYDWLGRMPYKGNTQNGAFKAQG 107
Query: 120 --LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSESL 176
L + GY ++D L +Y +G V + G + + GVE ++ +
Sbjct: 108 VQLTAKLGYPITDDLDVYTRLGGMVWRADAQNNTGFKDHDTGVSPVFAGGVEY-AVTRDI 166
Query: 177 VARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
RLEY+ + + V G + +S+GV +F
Sbjct: 167 ATRLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 201
>gi|170740663|ref|YP_001769318.1| porin [Methylobacterium sp. 4-46]
gi|168194937|gb|ACA16884.1| porin [Methylobacterium sp. 4-46]
Length = 284
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 50/193 (25%), Gaps = 56/193 (29%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALY----------------------------NGSFGEE 71
+ G YAGL Y +
Sbjct: 29 APPPVFAAVPVFTWTGFYAGLHTDYVFTERQRITTVGNTAFNQANVAALLRTPTTFAEVD 88
Query: 72 AHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNI------------HSLHGI 116
N GG I GYN + + ++ GV+ DV +T
Sbjct: 89 GFANVGGGI--GYNYQFTPGNGLVVGVQADVSWTAIEKNRGYLSPTVPVLVSTYKHSLNY 146
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQ----------KYETGKAGEITPIAIGGTAGVG 166
G++ R GY D ++ G G + + G G G
Sbjct: 147 LGTVVGRAGYAF-DRFFVFGLGGFAFGDVTTGANFYNGGLALAYTGRTSDVQTGYAYGGG 205
Query: 167 VEVGGLSESLVAR 179
+E ++S +A+
Sbjct: 206 IEYAIPADSFLAK 218
>gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3]
gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1]
Length = 354
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 40
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 41 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 95
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164
+ + + G+ L + GY ++D L +Y +G V + G+ +
Sbjct: 96 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 153
Query: 165 VGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 154 GGVEY-AITPEIATRLEYQWTN 174
>gi|213027149|ref|ZP_03341596.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 236
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + YAG ++ + G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DN + + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127
Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G T + G+E ++ + RLEY+ +
Sbjct: 128 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170
>gi|269963248|ref|ZP_06177582.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832053|gb|EEZ86178.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 185
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 16/160 (10%)
Query: 51 HDFNGPYAGLSALYNGS-----FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV-RYTVP 104
D +G Y G N F + + I GY + VE Y
Sbjct: 22 QDVSGFYLGGGVGNNTFSDDNPFTKVDDNGTAFKIIGGYQF---NRIVAVEAQYTNYGDF 78
Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
+ D + L S+ GY + L +AT G E G
Sbjct: 79 KIVDTAYDLGASNVSVAANIGYSFINGLRPFATFGLGYMSVDIPTTDNEDDLSLR---IG 135
Query: 165 VGVEVGGLS-ESLVARLEYRASKYS---KVEGFYNTISLG 200
G+E + E++ R+ Y ++ K + +G
Sbjct: 136 AGLEYTPIQLENITFRVAYEMDHFTVKPKGSSLDTDVQIG 175
>gi|27377196|ref|NP_768725.1| hypothetical protein bll2085 [Bradyrhizobium japonicum USDA 110]
gi|12620785|gb|AAG61061.1|AF322013_180 ID877 [Bradyrhizobium japonicum]
gi|27350339|dbj|BAC47350.1| bll2085 [Bradyrhizobium japonicum USDA 110]
Length = 417
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 51/159 (32%), Gaps = 23/159 (14%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRR----AHHGGRGVVPTIATNRYVPIRHDFNGP 56
M+ L +G +++AL + +A AAD A R F+ P
Sbjct: 1 MRPGVLLLGATTIALVANGAANAADLEPEVKLPAAVWNWSGGYIGGHVGGGYGRTSFSNP 60
Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY------------TVP 104
Y + G GYN + + ++GVE DV +
Sbjct: 61 Y-----GPSIYGGIVDTPTFLAGGQIGYNWQKNGWVFGVELDVSGAVSDGTNTCLASSGF 115
Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPD 141
V++ N + I + R GY S L Y G
Sbjct: 116 VVSANCKAGPNIFATATGRVGYTFGASGGTLAYLKGGAA 154
>gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3]
gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3]
Length = 383
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 65/207 (31%), Gaps = 9/207 (4%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ SS+ A A H T N + + G Y +
Sbjct: 44 IKKQALFSSVLFLLAVPAYA-QVENSTSHEFSDYSDTRQNNAHAYVGLRGGGTYFEGACS 102
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIR 123
NGS + + G ++ GY + G S +G L
Sbjct: 103 SNGSECND--NTFGYGLYGGYQFISWFALEGAVTHYGTPDASYGLKNISAEVLGSELTGV 160
Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKAGEI-TPIAIGGTAGVGVEVGGLSESLVARLEY 182
Y++S+S YA VG + G T G + +GV+ +S++ R EY
Sbjct: 161 FSYDLSESFDAYARVGVAYQNIEKNSTGGSELTSNEWGMLSALGVDYR-VSQNWSLRGEY 219
Query: 183 RASK-YSKVEGFY---NTISLGVGMKF 205
+ E + +SLG+ F
Sbjct: 220 QFIDGIGNSELMKSDMHFLSLGLTYHF 246
>gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli]
Length = 354
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 134 DTKSNFDGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174
>gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74]
Length = 346
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NTY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|329851300|ref|ZP_08266057.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19]
gi|328840146|gb|EGF89718.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19]
Length = 231
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 38/177 (21%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNG----------SFGEEA-----HHNAGGSIF 81
V +A + D +G G+ A Y FG++ G +
Sbjct: 15 SVSALALAGAPAMADDLSGTRIGVHAGYLWGDLEPTSGFDDFGDDHIEGYETDAEVGGVE 74
Query: 82 AGYNVEDSCIMYGVEG------------------DVRYTVPVLADNIHSLHGIGGSLRIR 123
++ +D ++G+ D + S R
Sbjct: 75 LRHDWQDGDTVFGLYASWTGTNAEGGTTIEKTTVDSEGVNISTDHGFDTNLAWLASAGGR 134
Query: 124 GGYEVSDSLLLYATVGPDVAQKYE----TGKAGEITPIAIGGTAGVGVEVGGLSESL 176
G ++ + L+YA VG + G + + A G AGVG++ +++
Sbjct: 135 VGTVINGNTLIYAQVGAASGRLKITETGDGAGAKRSVTAYGYAAGVGIDYQ-ITDRW 190
>gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3]
Length = 354
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174
>gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3]
gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1125]
Length = 354
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 133
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174
>gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536]
gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206]
gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536]
gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82]
gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206]
Length = 346
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNFDGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 331
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 20/139 (14%)
Query: 66 GSFGEEAHHNAGGSIFAGYNVE-----DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ + ++ G IF GYN + ++ Y E V I L
Sbjct: 48 WTPDNQDQNDLAGGIFLGYNYKPWLAVETGYTYLGEAQFGNNRSVEQQGID--------L 99
Query: 121 RIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178
+ ++ +DSL ++A G A + T G GVE ++++ A
Sbjct: 100 VGKFTWQATDSLDVFAKAGGFYYFADGKGEFNTSHDRGLIP--TTGAGVEY-FFNKNVSA 156
Query: 179 RLEYRASKYSKVEGFYNTI 197
RLEY+ Y ++ + +
Sbjct: 157 RLEYQY--YHDIDLKDSGV 173
>gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197]
gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197]
Length = 350
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 31/166 (18%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVA 143
G E + Y + + + G+ L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 144 QKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 126 DTKANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1]
gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1]
Length = 354
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174
>gi|7188822|gb|AAF37889.1|AF234271_1 outer membrane protein A [Shigella flexneri]
Length = 246
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145
G E + Y P DNI+ + G L + GY ++D L +Y +G A
Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127
Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G + + GVE ++ + RLEY+ +
Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170
>gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143]
gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299]
gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143]
gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299]
Length = 346
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNFDGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|27379465|ref|NP_770994.1| hypothetical protein bll4354 [Bradyrhizobium japonicum USDA 110]
gi|27352617|dbj|BAC49619.1| bll4354 [Bradyrhizobium japonicum USDA 110]
Length = 279
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 72/233 (30%), Gaps = 52/233 (22%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ LA+ + S AAD R P + P+ ++ G Y
Sbjct: 20 MKKILLALTAVAAMTGSAS---AADLAAR---------PYVKAPMAAPVA-NWTGFYIFG 66
Query: 61 SALYNGSFGEEAHHNAG-----------------GSIFAGYNVE-DSCIMYGVEGD---- 98
S +++ + G++ GY+ + + GV D
Sbjct: 67 GGGGGLSNADQSVVDTVTGTPLTITQRQGGSGWFGTVGLGYDWQFSGTWVAGVFADGQFG 126
Query: 99 -VRYTVPVLADNIHSLHGIGGSLRI--RGGYEVSDSLLLYATVGPDVAQ---------KY 146
+R T+ I + S R G+ V+ ++L Y G A
Sbjct: 127 SIRATIQDPIFGITGNQKLEDSWAAGVRLGWLVAPNVLSYVNGGYSGAHFGQTNFTDLAG 186
Query: 147 ETGKAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGFY 194
A + G G GVE G S + EYR++ Y+
Sbjct: 187 VPVGAHLASYNRNGWFIGGGVENSLNIFGITSPGWFMKTEYRSAFYNAKTQTE 239
>gi|238752400|ref|ZP_04613878.1| Opacity protein and surface antigens-like protein [Yersinia rohdei
ATCC 43380]
gi|238709441|gb|EEQ01681.1| Opacity protein and surface antigens-like protein [Yersinia rohdei
ATCC 43380]
Length = 227
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 25/149 (16%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119
GEE H+ GS+ AGY + + EG+ Y ++ S
Sbjct: 58 GEEKHNFYNGSLAAGYQFGNG---WRTEGE--YVFKKKSEYTSGSSIFATSYNHHKVDVQ 112
Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169
L + Y + + +Y T+G +A+ +G G E T + + G GV
Sbjct: 113 RLMLNVYRDYALGYDISIYGTLGLGLAKVESSGWQGNTSRQYTENTQTNLAYSVGAGVSY 172
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTIS 198
+ +L L YR VE YN +
Sbjct: 173 -AVMNNLSIDLGYRYVDMGNVESGYNNFT 200
>gi|146343090|ref|YP_001208138.1| hypothetical protein BRADO6285 [Bradyrhizobium sp. ORS278]
gi|146195896|emb|CAL79923.1| Putative outer membrane protein [Bradyrhizobium sp. ORS278]
Length = 267
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 16/93 (17%)
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------------EITP 156
L R GY V D L YA G A + G E
Sbjct: 137 KIKTDFITDLTARAGYAV-DHWLFYAKGGVAWASTKYSVTGGFTNAGANPAIAFDFEGLS 195
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ G TAG GVE + AR EY +
Sbjct: 196 VRTGWTAGAGVEWAFAQD-WSARFEYDYYDFGT 227
>gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii]
Length = 346
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2]
Length = 354
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 77
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174
>gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88]
gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218]
gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88]
gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034]
gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli
H252]
gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli
H263]
Length = 346
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933]
gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai]
gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046]
gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. W3110]
gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS]
gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11]
gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989]
gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606]
gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359]
gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000]
gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966]
gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70]
gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str.
EDL933]
gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli]
gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12
substr. W3110]
gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai]
gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei]
gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046]
gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS]
gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli]
gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli]
gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli]
gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli]
gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli]
gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11]
gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989]
gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)]
gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str.
REL606]
gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)]
gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7
str. TW14359]
gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli DH1]
gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70]
gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W]
gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli DH1]
gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687]
gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905]
gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61]
gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14]
gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010]
gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68]
gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180]
gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357]
gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1520]
gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli
E482]
gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli
H120]
gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli
H489]
gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli
TA007]
gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1167]
Length = 346
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|197116786|ref|YP_002137213.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086146|gb|ACH37417.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 459
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 34/207 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K V V +L L F + A V PY
Sbjct: 1 MKKYLQLVLVPALLLGLFTQSYA----------------------EVKPESFSVSPYV-- 36
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLHGIGG 118
A Y+ E + GYN +G+E + Y T I + +
Sbjct: 37 -AGYSFFGRERLETGPAVGLRGGYNFTSH---FGMEAVLTYISTEGKDGSGIGDVDALNY 92
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178
L + + ++L+ Y +G + GE+ A G GV+ L++++
Sbjct: 93 HLDMLYHFMPENTLVPYLAMGY-GGHWRDYEGDGEVNRSAFNY--GGGVKY-FLTDAMAL 148
Query: 179 RLEYRASKYSKVEGFYNTISLGVGMKF 205
R + R + ++ + G+G+ F
Sbjct: 149 RGDVRHIIMKDRDETFHDLEYGLGVDF 175
>gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69]
gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6
str. E2348/69]
Length = 346
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407]
Length = 346
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQATPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431]
Length = 346
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y +A+ + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVANGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026]
gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302]
gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli]
gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026]
gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302]
Length = 346
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
EC1212]
gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B]
gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G]
Length = 337
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 7 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 60
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 61 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 116
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 117 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 157
>gi|119470321|ref|ZP_01613080.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Alteromonadales bacterium TW-7]
gi|119446493|gb|EAW27768.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Alteromonadales bacterium TW-7]
Length = 187
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 13/138 (9%)
Query: 57 YAGLSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112
Y G+ E++ ++ + GY VE + Y +I S
Sbjct: 32 YTGIGYGQYSFEFEDSENDTDFDDDAQMLKGYVGTQFNEYLSVE--LAYQNFDEVSDIDS 89
Query: 113 LHGIGG-SLRIRGGYEVSDSLLLYATVGPDV--AQKYETGKAGEITPIAIGGTA--GVGV 167
I G SL R G +++S +YA G A + G ++ GG A G G+
Sbjct: 90 KAEIDGVSLAARLGIPLTESFSVYAKGGWLEWDADIKQELPVGSVSTSQDGGDAFYGAGL 149
Query: 168 EVGGLSESLVARLEY-RA 184
E S ++ RLEY R
Sbjct: 150 EF-AFSSNVQMRLEYERY 166
>gi|310816635|ref|YP_003964599.1| heme receptor [Ketogulonicigenium vulgare Y25]
gi|308755370|gb|ADO43299.1| heme receptor [Ketogulonicigenium vulgare Y25]
Length = 1183
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 56/200 (28%), Gaps = 60/200 (30%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSI--------------------FAGYNVEDSC 90
D+ G +AGL +N + + + GS GYN + +
Sbjct: 900 RDWAGWHAGLFTGFNSTENDTSFTALDGSTNSITANEGFVADFNGALVGGQVGYNWQFAN 959
Query: 91 -IMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDSL 132
++ GV+G+ LA H +L +R GY S+
Sbjct: 960 GLILGVQGEFSRPDQRADIEILSNEGTLAGTANLAAGYHQQIDWNAALNLRAGYAFSNDF 1019
Query: 133 LLYATVGPDV---------------------AQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+Y G EI G G G E
Sbjct: 1020 NMYGLAGVARQEETWFRDSYTADYASRYMPNGNGTTFAGLEEIDVSRNGINIGFGAEY-A 1078
Query: 172 LSESLVARLEYRASKYSKVE 191
L+++ ++ + + K E
Sbjct: 1079 LNDNWSIWGQFNRTFFRKTE 1098
>gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum]
Length = 319
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 22/159 (13%)
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG 118
+ + G + G F GY V G E + Y P DNI+ + G
Sbjct: 18 GFIHNDGPTDENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDNINGAYKAQG 72
Query: 119 -SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGL 172
L + GY ++D L +Y +G A G + + G+E +
Sbjct: 73 VQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPVFAGGIEY-AI 131
Query: 173 SESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
+ + RLEY+ + + + + +S+GV +F
Sbjct: 132 TPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 170
>gi|54302322|ref|YP_132315.1| outer membrane protein OmpA [Photobacterium profundum SS9]
gi|46915744|emb|CAG22515.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
SS9]
Length = 324
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI 116
Y+GLS + + + GG F GYN+ + G + D G+
Sbjct: 37 YSGLSI--DSRSSDIDKEDWGGGAFLGYNIVPWFAVEGGYTYLGEMDFKADDASIEQQGL 94
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG--GTAGVGVEVGGLSE 174
L + + V++S+ L+A G Y T +G I+ G GTAGVG E ++
Sbjct: 95 D--LVGKFTWNVTNSIDLFAKAG---GFYYFTDGSGAISGSDDGIIGTAGVGAEY-FFNK 148
Query: 175 SLVARLEYR-ASKYSKVEGFYNTISLGV 201
+L ARLEY+ + + ++T G+
Sbjct: 149 NLSARLEYQYYNDLELKDASWDTHFYGI 176
>gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 352
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 16/135 (11%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119
+ Y + +F GYNV + +EG YT + + H G
Sbjct: 47 ANGTYGSGAEGVDRDDFAAGVFMGYNVTP---WFAIEG--GYTWLGEVTSKYDEHHDSGK 101
Query: 120 LR-------IRGGYEVSDSLLLYATVG--PDVAQKYETGK-AGEITPIAIGGTAGVGVEV 169
+ + Y+ +D + LY VG + ++ TAG+G E
Sbjct: 102 IEQQAIDLVGKFTYQATDKVDLYTKVGGAWQFTRAKGLPGQTATDRDDSLIATAGLGAEY 161
Query: 170 GGLSESLVARLEYRA 184
+++L AR EY+
Sbjct: 162 H-FTDNLSARAEYQY 175
>gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a]
gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a]
Length = 346
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
Length = 356
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 68/220 (30%), Gaps = 40/220 (18%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57
+ ++ALA F + AQAA Y + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQYHDTGYY 45
Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
Y + G G F GY + G E + + +
Sbjct: 46 ---GHGYENNDGPTHESQLGAGAFVGY---QANPYLGFEMGYDWLGRMPNKGNVTNGAFK 99
Query: 118 G---SLRIRGGYEVSDSLLLYATVG-----PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
L + Y ++D L +Y +G D Q +T + A VGVE
Sbjct: 100 AQGVQLAAKLSYPINDDLDVYTRLGGMVWRADATQTNQTTGRISDHDTGVSPLAAVGVEY 159
Query: 170 GGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
L+++ RL+Y+ V + L VG+ +
Sbjct: 160 -ALTQNWATRLDYQWVNNIGDAQTVGARPDNGMLSVGVSY 198
>gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
Length = 327
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 53 FNGPYAGLSALYNGSFG----EEAHHNAGGSIFAGYNVEDSCIM--YGVEGDVRYTVPVL 106
+ G G + Y+ G + + GG +F GYN I+ + VEG Y
Sbjct: 27 YAGARVGGT-SYSDFSGLGPAQIDKEDWGGGVFLGYN-----IVPWFAVEGGYTYLGEAD 80
Query: 107 ADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
++ G L + + V++S+ L+A G +G IG TAGV
Sbjct: 81 IKGTNTSIEQQGIDLVGKFTWNVTNSIDLFAKAGGFYYFADSSGPIDVSDDGIIG-TAGV 139
Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197
G E +++L ARLEY+ Y VE + I
Sbjct: 140 GAEY-FFNKNLSARLEYQY--YHDVELKDSGI 168
>gi|46203688|ref|ZP_00051145.2| COG0124: Histidyl-tRNA synthetase [Magnetospirillum magnetotacticum
MS-1]
Length = 284
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 49/194 (25%), Gaps = 57/194 (29%)
Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYNGS-----FGEEAHHNAGGSIFA----------- 82
+ P + G YAGL Y + G++ A
Sbjct: 27 EAPPIAFAPVPVFTWTGFYAGLHTGYAFTDNQNIRTSGNDLFTAGNVTAGRRPASLKSEV 86
Query: 83 ----------GYNVED---SCIMYGVEGDVRYTVPVLADNIHS--------------LHG 115
GYNV+ S + GV DV + +
Sbjct: 87 DGFSKIGGGFGYNVQFTPGSGFVAGVALDVTWLDLDKHTGFYGTPNPVVGNASVYTQNID 146
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVA------------QKYETGKAGEITPIAIGGTA 163
G++ + GY D L+Y T G G G
Sbjct: 147 FLGTVNGKLGYAF-DRFLVYGTGGLAFGYVGYGADFYNPNATVLQYTGGARKIFETGYNY 205
Query: 164 GVGVEVGGLSESLV 177
G G+E ++S +
Sbjct: 206 GGGIEYAIPADSFL 219
>gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli]
Length = 346
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVKNGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|84386140|ref|ZP_00989169.1| hypothetical protein V12B01_18141 [Vibrio splendidus 12B01]
gi|84378910|gb|EAP95764.1| hypothetical protein V12B01_18141 [Vibrio splendidus 12B01]
Length = 198
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 43/132 (32%), Gaps = 12/132 (9%)
Query: 55 GPYAGLSAL-YNGSFGEEA----HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109
G Y G Y GS + A G +++ GY + GVE + Y N
Sbjct: 33 GAYVGGGLSAYQGSDADGAPNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKN 87
Query: 110 IHSLHG-IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
S+ GY +++ + G AG G GVGVE
Sbjct: 88 STDKLSPTSISVSANVGYTFDNTIRPFVLAGLSSVDLNANSGAGYNDDSGTGFHFGVGVE 147
Query: 169 VGGLSESLVARL 180
+ E L RL
Sbjct: 148 YTPV-EHLTLRL 158
>gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75]
gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75]
Length = 346
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVKNGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469]
gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC
35469]
Length = 375
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 62/232 (26%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 57 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAI 159
+ + + G+ L + GY ++D L +Y +G A TG++ + +
Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDTGV 169
Query: 160 GGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
GVE ++ + RLEY+ + + + + +SLGV +F
Sbjct: 170 SPVFAGGVE-WAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRF 220
>gi|332704398|ref|ZP_08424486.1| OmpA domain protein transmembrane region-containing protein
[Desulfovibrio africanus str. Walvis Bay]
gi|332554547|gb|EGJ51591.1| OmpA domain protein transmembrane region-containing protein
[Desulfovibrio africanus str. Walvis Bay]
Length = 219
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 33/172 (19%)
Query: 53 FNGPYAGLSAL---------YNGSFG-----EEAHHNAGGSIFAGYN----------VED 88
F+G Y G A Y+ G E + GY E
Sbjct: 24 FDGFYIGAKAGLESYDVDVEYDLGGGGSLDDEADDSGFVAGAYLGYGRTIKNVFYLGWET 83
Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
+ +G++G+ Y +++ +G ++ R G ++D L Y VG +A
Sbjct: 84 DAMYHGMDGEFDYYQGHYYESLDMNWSLG--VKARLGGVIADRHLAYGLVGLRIAGFDYR 141
Query: 149 GKAG------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
G E P+ G T G G E +++ L+AR E + Y+ E Y
Sbjct: 142 NDTGYAVDDEEENPVLPGFTVGGGYEF-AITKHLIARAEIAYTAYAAYELEY 192
>gi|183598197|ref|ZP_02959690.1| hypothetical protein PROSTU_01579 [Providencia stuartii ATCC 25827]
gi|188020364|gb|EDU58404.1| hypothetical protein PROSTU_01579 [Providencia stuartii ATCC 25827]
Length = 228
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 25/155 (16%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL-------- 120
G++ S+ AGY + + EG+ Y+ A+ S
Sbjct: 59 GDDKDDFYNASLAAGYQYGNG---WRTEGE--YSFNKKAEYTSGSTAFSTSFNHHKTESQ 113
Query: 121 RIRGG----YEVSDSLLLYATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEV 169
R+ Y++ + +Y TVG VA+ +G + G T + + G GV
Sbjct: 114 RLMLNVYRDYDIYQGISVYGTVGLGVAKVKSSGWQGNAARQYGSNTDTNLAYSIGAGVSY 173
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204
+ + L L YR K+E N + G++
Sbjct: 174 EPI-DKLNFDLGYRYIDLGKIESGMNRFANARGIQ 207
>gi|118578882|ref|YP_900132.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501592|gb|ABK98074.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 417
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 10/150 (6%)
Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
G+ I AGYN + G+E Y+ N L +
Sbjct: 38 GGITFGGGQHLETAPVYGIRAGYNFTKA---LGIEALFDYSNTEPTSNGSKLTNGKNTDY 94
Query: 122 IRGGYEV------SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175
R G E+ + + Y G AGE + + G G+G + L++
Sbjct: 95 YRMGGELLYHFFPDNKFVPYFAAGYAAHTFKGAVPAGESSDVKGVGDYGLGAKY-FLNDK 153
Query: 176 LVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ R + R Y + + + +G+ F
Sbjct: 154 VALRGDVRHLIYRQASETQHAVEYTMGLHF 183
>gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 23/160 (14%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103
Y + + + GL+ + GE ++ +F GY + + +G+ ++ Y
Sbjct: 27 YAGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNN-FGLATELGYDY 85
Query: 104 PVLADNIHSLHGIGGSLRI------------RGGYEVSDSLLLYATVGPDVAQK--YETG 149
+ G R + YEV +L +Y VG + + Y
Sbjct: 86 FGRVRGNKTFEGENSDKRAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQ 145
Query: 150 KAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184
+ + I G G+E ++ L AR+EY+
Sbjct: 146 NVAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184
>gi|90577941|ref|ZP_01233752.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441027|gb|EAS66207.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 347
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 52/154 (33%), Gaps = 10/154 (6%)
Query: 41 IATNRYVPIRHDFNGP-YAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
AT + G Y+ Y G + +FAGYN + VE
Sbjct: 21 AATVNPFYVGARLGGAHYSNFQQNYQDITGINLNKDDVAAGVFAGYNFTP---WFAVET- 76
Query: 99 VRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
YT A ++ L + + ++D ++ +G G +
Sbjct: 77 -GYTWLGEAKFENNKIKQNAIDLAAKMTWNLNDQWGVFGKLGGSYMLADFHGYGIKDLDD 135
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYR-ASKYSKV 190
+ GTAGVGVE L+ L RLEY+
Sbjct: 136 HLLGTAGVGVEY-KLTNHLSTRLEYQLYHDIRSK 168
>gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
Length = 346
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENKLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YE-TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
+ G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTYSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
Length = 375
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 68/207 (32%), Gaps = 56/207 (27%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 57 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAI 159
+ + + G+ L + GY ++D L +Y +G A TG++ + +
Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKNHDTGV 169
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASK 186
GVE ++ + RLEY+ +
Sbjct: 170 SPVFAGGVE-WAITPEIATRLEYQWTN 195
>gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 332
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 51/174 (29%), Gaps = 21/174 (12%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYG 94
++ + V Y G + GYN D
Sbjct: 8 VSASLLVASSAAMADVYVGAKVGKTWLDDACNNTESCDLDGTTAGALLGYNFND---WLA 64
Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154
+EG Y + +L + Y +++ LY VG + +
Sbjct: 65 LEGGYDYLGKFNGAGLDRDTIQAYTLAPKLSYALTEQWDLYGKVGAARVRYGDASDYS-- 122
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
GVE + +L R+EY+ S + V +T +LG+ +F
Sbjct: 123 ------YLGAAGVEYAA-TRNLGVRVEYQYLSDMNNDVVRAKAHTTTLGLVYRF 169
>gi|311696345|gb|ADP99218.1| OmpA domain protein transmembrane region-containing protein [marine
bacterium HP15]
Length = 192
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 52/164 (31%), Gaps = 9/164 (5%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96
V + D +GPY S Y GE N GY + +E
Sbjct: 18 VTAPVALAQSNVERDQSGPYVSGSYGGYKSHGGEFEDENDLLGAAVGYQF---NPFFALE 74
Query: 97 GDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
+ D++ G G S R ++DS +Y G + T
Sbjct: 75 AEYIDFGNFGEDDVEGKLKGFGLSAVGRL--PLTDSFGVYGKAGAFASAFDVDAFNESET 132
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSKVEGFYNTIS 198
+ G GV+ ++ +L A EY R + E F ++
Sbjct: 133 YDEVSPFVGAGVDFR-VTPALTAFAEYNRYNVDIDKEDFNGQVT 175
>gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
Length = 350
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 62/187 (33%), Gaps = 31/187 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN------------GSFGEEAHHNAGGSIFAGYNVED 88
+ P + + YAG ++ + G G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGWYNSSLNNNGPTHESQLGAGAFGGYQV-- 70
Query: 89 SCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVA 143
G E + Y P D ++ G L + GY ++D L +Y +G V
Sbjct: 71 -NPYLGFE--MGYDWLGRMPYKGDQVNGAFKAQGVQLTAKLGYPITDDLDIYTRLGGMVW 127
Query: 144 QKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTIS 198
+ + AG+ + GVE ++ + RLEY+ V +
Sbjct: 128 RADSSNSIAGDNHDTGVSPVFAGGVE-WAVTRDIATRLEYQWVNNIGDAGTVGVRPDNGM 186
Query: 199 LGVGMKF 205
L VG+ +
Sbjct: 187 LSVGVSY 193
>gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 332
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 47/158 (29%), Gaps = 21/158 (13%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + GYN D +EG Y +
Sbjct: 24 YVGAKVGKTWLDDACNNTESCDLDGTTAGALLGYNFND---WLALEGGYDYLGKFNGAGL 80
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
+L + Y +++ LY VG + + GVE
Sbjct: 81 DRDTIQAYTLAPKLSYALTEQWDLYGKVGAARVRYGDASDYS--------YLGAAGVEYA 132
Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
+ +L R+EY+ S + V +T +LG+ +F
Sbjct: 133 A-TRNLGVRVEYQYLSDMNNDVVRAKAHTTTLGLVYRF 169
>gi|91785689|ref|YP_560895.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400]
gi|91689643|gb|ABE32843.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400]
Length = 173
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 33/173 (19%)
Query: 44 NRYVPI---RHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95
+ VP F GPY G N G + +H AGYN + + + G
Sbjct: 22 AQSVPPLMGASQFAGPYLGFKVGVNSSNASGVISKASHTTVFPGFTAGYNFDVNRFVVGA 81
Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
E G + + G + +L Y +G G+
Sbjct: 82 EAFADLHHGSTTCK-------DGGIDAKFGMPF-NQVLPYVRIG----------FTGDDP 123
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
G+GVE + + A E+ + S +G N+ ++G+ F
Sbjct: 124 DTRFHW--GLGVEY-KFARHISAVGEWT-TDTSNHDGTKRTNNSFTIGLQYHF 172
>gi|268591643|ref|ZP_06125864.1| porin, opacity type [Providencia rettgeri DSM 1131]
gi|291312944|gb|EFE53397.1| porin, opacity type [Providencia rettgeri DSM 1131]
Length = 228
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 51/155 (32%), Gaps = 25/155 (16%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119
G++ GS+ AGY + G + YT A+ S
Sbjct: 59 GDDKDDFYNGSLAAGYQFGN-----GWRTEAEYTFNKKAEYTSGSTTFPTSLNHHKTESQ 113
Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169
L YE+ + +Y T G +A+ +G G T + + G GV
Sbjct: 114 RLMLNAYRDYEIYQGVSIYGTAGVGIAKVKSSGWQGNVSRQYASNTDTNLVYSLGAGVSY 173
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204
+ L L YR K+E N + G++
Sbjct: 174 EPI-NKLNFDLGYRYVDLGKIESGMNRFANARGLQ 207
>gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes]
Length = 350
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 27/185 (14%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN------------GSFGEEAHHNAGGSIFAGYNVED 88
+ P + + YAG ++ + G G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGWYNSNLNNNGPTHESQLGAGAFGGYQV-- 70
Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + + + L + GY ++D L +Y +G V +
Sbjct: 71 -NPYLGFEMGYDWLGRMPYKGVKVNGAFSSQAVQLTAKLGYPITDDLDIYTRLGGMVWRA 129
Query: 146 YETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLG 200
+ AG+ + GVE ++ + RLEY+ V + L
Sbjct: 130 DSSNSIAGDNHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAGTVGVRPDNGMLS 188
Query: 201 VGMKF 205
VG+ +
Sbjct: 189 VGVSY 193
>gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia
fergusonii B253]
gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227]
Length = 359
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 62/232 (26%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
QK+ ++ALA F + AQAA P + + Y G
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 40
Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105
++ G + G F GY V G E + Y
Sbjct: 41 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 95
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAI 159
+ + + G+ L + GY ++D L +Y +G A TG++ + +
Sbjct: 96 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDTGV 153
Query: 160 GGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
GVE ++ + RLEY+ + + + + +SLGV +F
Sbjct: 154 SPVFAGGVE-WAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRF 204
>gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380]
Length = 373
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 83/250 (33%), Gaps = 67/250 (26%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ VS LALA AQAA Y + + + G+
Sbjct: 1 MKKTVIALAVSGLALA--SVAQAA---------------PQQNTAYAGAKVGWASFHEGV 43
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGGS 119
+N + +A +N+ + + + + + YGV G + + G
Sbjct: 44 R-QFNDKYSNDARYNSDTTAYG---INRNSVTYGVFGGYQILNQNNFGLAAELGYDYYGR 99
Query: 120 LRIRGG-------------------YEVSDSLLLYATVGPDVAQKY--------ETGKAG 152
+R G YEV +L +Y VG V +
Sbjct: 100 VRGNVGDFREFKHSAHGLNFALKPSYEVLPNLDVYGKVGVAVVRNDYKFYGAENTNEPTE 159
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-------------SKYSKVEGFY----N 195
+ + G GVE L E L AR+EY+ S V+ Y +
Sbjct: 160 KFHKLKASTILGAGVEYAILPE-LAARIEYQYLNKAGNFNKALVRSGTQDVDFQYAPDIH 218
Query: 196 TISLGVGMKF 205
+++ G+ +F
Sbjct: 219 SVTAGLSYRF 228
>gi|315122523|ref|YP_004063012.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495925|gb|ADR52524.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 229
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 33/219 (15%)
Query: 3 KLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
++F + SSL L F S A AA+ + Y + G Y +
Sbjct: 13 RIFSKLLYSSLFLGFFSSSAMAANNSYEYY---------PPALNYQSSIPKWKGSYISVD 63
Query: 62 ALYNGSFGEEA-HHNAGGSIFA-------GYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113
G+++ S+ A G++ ++ ++YG + Y I +
Sbjct: 64 MANAALVGKDSVGIIRDRSVHAALNKFTFGFDSQEGTLVYG--ASIGYENHFTNGQIVNA 121
Query: 114 HGIGG--SLRIRGGYEVSD-------SLLLYATVGP---DVAQKYETGKAGEITPIAIGG 161
SL +R G+ + + ++Y VG DV+ ++ +
Sbjct: 122 AFQNSAISLMLRSGFTFDNANSSLFQNTVIYGAVGVRLRDVSSLKSVADVLKLDLTKLDQ 181
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
VG+E L+ L EYR + G
Sbjct: 182 VYAVGIE-KKLASMLSMHAEYRIVDSINSAMTLSNAKTG 219
>gi|107027296|ref|YP_624807.1| porin, opacity type [Burkholderia cenocepacia AU 1054]
gi|116691307|ref|YP_836840.1| porin, opacity type [Burkholderia cenocepacia HI2424]
gi|105896670|gb|ABF79834.1| porin, opacity type [Burkholderia cenocepacia AU 1054]
gi|116649307|gb|ABK09947.1| porin, opacity type [Burkholderia cenocepacia HI2424]
Length = 236
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 62/200 (31%), Gaps = 15/200 (7%)
Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71
SLAL +A A AT R + + + + G +
Sbjct: 10 SLALLFSGAAFADTVAPETKKQDPSDAGYYATARVIGAFDNAVNMELTSPRVTSRIGGPD 69
Query: 72 AHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL--RIRG 124
GS+ GY + ++ G+ N + H L
Sbjct: 70 GQDRVTGSVAGGYQFGNGWRAEGEYVFKRSGNFVSYWAPFDANANEFHVSSQRLMLNGYR 129
Query: 125 GYEVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
+++ +Y T+G VA Q +T + T + +AG GV +++
Sbjct: 130 DFDLGRGFSVYGTLGVGVAIVSAEGWQGNDTRRFASKTQTNLAYSAGAGVSY-AINKRFT 188
Query: 178 ARLEYRASKYSKVEGFYNTI 197
+ YR VE +NT
Sbjct: 189 IDVGYRYVDMGNVETGFNTF 208
>gi|188582112|ref|YP_001925557.1| porin [Methylobacterium populi BJ001]
gi|179345610|gb|ACB81022.1| porin [Methylobacterium populi BJ001]
Length = 285
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 50/195 (25%), Gaps = 59/195 (30%)
Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYN-------GSFGEEAHHNAG-------------- 77
+ P + G YAGL Y + G +A
Sbjct: 27 EAPPVAFTPVPVFTWTGFYAGLHTGYAFTDNPNIQTRGNDAFTATNVQLARRPASLKSEV 86
Query: 78 ------GSIFAGYNVED---SCIMYGVEGDVRY-------------TVPVLADNIHSLH- 114
G F GYN + S + G+ D + V ++++
Sbjct: 87 DGFSRIGGGF-GYNYQFTPGSGFVAGLAFDATWLDLDKRIGFYGTPNPVVGNASVYTQDL 145
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------------KYETGKAGEITPIAIGGT 162
G++ + GY D +Y T G G G
Sbjct: 146 DFLGTVNGKLGYAF-DRFFVYGTGGLAFGHVSYGADFFNPGATVLQYTGGGRKIFETGYN 204
Query: 163 AGVGVEVGGLSESLV 177
G G+E +S +
Sbjct: 205 YGGGIEYAITPDSFL 219
>gi|146340512|ref|YP_001205560.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146193318|emb|CAL77334.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 259
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 58/198 (29%), Gaps = 40/198 (20%)
Query: 40 TIATNRYVPIRHDFNGPYA-GLSALYNGSFGEEAHHNAG---------------GSIFAG 83
P+ + G Y G + G G++ AG
Sbjct: 27 PYVKAPMAPVAPSWTGFYIFGGGGGGLWNADSNVKTVGGLAITRDQRLGGNGWFGTVGAG 86
Query: 84 YNVE-DSCIMYGVEGDVRY-------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
Y+ + + + GV D ++ T P A + IR GY V+ ++L Y
Sbjct: 87 YDWQFNGSWLAGVFADGQFGDIRGSLTDPNFALEGREKLRTSYAAGIRVGYLVAPNVLSY 146
Query: 136 ATVGPDVAQ------KYETGKAGEITPI-----AIGGTAGVGVE-----VGGLSESLVAR 179
G + G G G GVE G + +
Sbjct: 147 VNGGYSGSDWSGTNLSTLAAGGGATVATTPSFHRDGWFIGGGVENNLNIFGISAPGWFMK 206
Query: 180 LEYRASKYSKVEGFYNTI 197
EYR++ YS+V +
Sbjct: 207 TEYRSAYYSRVTLPETAV 224
>gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
Length = 356
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 73/228 (32%), Gaps = 56/228 (24%)
Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+K+ ++ALA F + AQAA P + Y G
Sbjct: 5 RKMKKTAIALAVALAGFATVAQAA-----------------------PKDDTW---YVGG 38
Query: 61 SALYNGSFGE---------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL---AD 108
++ G + G F GY + G E + Y
Sbjct: 39 KLGWSHYIGNSFENMDSTKSHPNQLGAGAFFGY---QANPYLGFE--MGYDWLGRMGYTG 93
Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTA 163
+++ G L + Y + D+L +Y +G A + + A
Sbjct: 94 DVNGKFKAQGIQLAAKLSYPLMDNLDVYTRLGGMVWRADAHASDATDYVSGHDTGVSPLA 153
Query: 164 GVGVEVGGLSESLVARLEYRA-SKYSKVEGF----YNT-ISLGVGMKF 205
+GVE L++ RL+Y+ +K NT +SLGV +F
Sbjct: 154 AIGVEY-ALNKDWATRLDYQYVNKIGTSSQTGARPDNTLLSLGVVYRF 200
>gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing
protein [Pantoea sp. At-9b]
gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. At-9b]
Length = 356
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 67/221 (30%), Gaps = 43/221 (19%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57
+ ++ALA F + AQAA Y + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDDTWYTGAKLGWSQYHDTGYY 45
Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSL 113
Y + G G F GY + G E + Y P I+
Sbjct: 46 ---GNGYENNNGPTHESQLGAGAFLGY---QANPYLGFE--LGYDWLGRMPNKGSEINGA 97
Query: 114 HGIGG-SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAG-EITPIAIGGTAGVGVE 168
G L + Y ++D L +Y +G + A VGVE
Sbjct: 98 FKAQGVQLAAKLSYPITDDLDVYTRLGGMVWRADSTQNNNGVRISDHDTGVSPLAAVGVE 157
Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
L+++ RL+Y+ V + L VG+ +
Sbjct: 158 Y-ALTKNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 197
>gi|170749946|ref|YP_001756206.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656468|gb|ACB25523.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 245
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 58/167 (34%), Gaps = 34/167 (20%)
Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHN--------------AGGSIFAGYNVED---SCIM 92
+ G YAG++A Y G + G GYN + S ++
Sbjct: 40 VFTWTGFYAGVNAGYAFPTGSGGFTDPTYGTVTGGGRSGGFAGGGQVGYNYQFTPGSGVV 99
Query: 93 YGVEGDVRYTVPVLADNIHSLH----------GIGGSLRIRGGYEVSDSLLLYATVGPDV 142
GVE D++ T AD + G++R R GY D +L+Y T G
Sbjct: 100 VGVETDIQGTAFAKADAAYLGTAPYYSVRPSLDYFGTVRARLGYAF-DRVLVYGTGGFAY 158
Query: 143 AQKYETGKAGEITPIA-----IGGTAGVGVEVGGLSESLVARLEYRA 184
+ A G AG G+E +E L A++E
Sbjct: 159 GGGARSTYAASYPYTLPSTDRTGYAAGGGIEY-AFTEKLSAKVEALY 204
>gi|254497414|ref|ZP_05110213.1| putative outer-membrane immunogenic protein precursor [Legionella
drancourtii LLAP12]
gi|254353370|gb|EET12106.1| putative outer-membrane immunogenic protein precursor [Legionella
drancourtii LLAP12]
Length = 319
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 44/179 (24%), Gaps = 45/179 (25%)
Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGD---------------- 98
YA + + A+ G G+N S + G E D
Sbjct: 97 AYATAAVTGTKNKSSLANAGFIGGGQLGFNQTLQSHYVVGFEADIQGISESNRKKWSASA 156
Query: 99 VRYTVPV-------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-- 149
V + I G++R GY ++ + LL T G
Sbjct: 157 VNFNDNNGDPQIINTNTAIVQGTDFLGTVRGHLGYLINPAFLLSGTGGFAYGGVRSQTRI 216
Query: 150 ------------------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
G +G T G G + A++EY V
Sbjct: 217 IQSYGIPQNTNNLDANWRSVGYYANTRLGWTVG-GSFAWMPRPAWSAKIEYLYYNLGSV 274
>gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
Length = 351
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 38/192 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140
G E + Y + + + G+ L + GY ++D L +Y +G
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYN 195
A TG++ + + GVE ++ + RLEY+ + + + +
Sbjct: 126 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTNNIGDANTIGTRPD 184
Query: 196 T--ISLGVGMKF 205
+SLGV +F
Sbjct: 185 NGLLSLGVSYRF 196
>gi|332967863|gb|EGK06959.1| hypothetical protein HMPREF0476_1953 [Kingella kingae ATCC 23330]
Length = 185
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 64/166 (38%), Gaps = 13/166 (7%)
Query: 50 RHDFNGPYAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPV 105
+F G G+ E + ++ ++ Y E + +++Y + +
Sbjct: 23 NSNFVGAGVGIDTGVTNYTNVEGSKNSNATNLVGSYGFEFPDTPLVGQAELKYKLGSSKI 82
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
S H + G+ V++ L+ YA VG + T + G + A G T GV
Sbjct: 83 DDAGTKSKHLWNANYVQ--GFRVTNDLMPYAKVGYATGKFTGTDEDGAFSVRARGITYGV 140
Query: 166 GVEVGGLSESLVARLEYRASKY------SKVEGFYNTISLGVGMKF 205
G + ++ ++ EY S S + N +++GVG +F
Sbjct: 141 GAKY-AVAPNVEVGAEYVRSNLKVRDCDSDCKVKSNNVNVGVGYRF 185
>gi|315936245|gb|ADU55796.1| putative heme-binding phage-associated protein [Bartonella
henselae]
Length = 163
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 32/113 (28%)
Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH------- 73
AQAAD + V +A + G Y G G+F +
Sbjct: 1 AQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKVEITDPNKK 48
Query: 74 ------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSL 113
G I+AG N++ ++ GVE D + A +
Sbjct: 49 DKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAK 101
>gi|110835522|ref|YP_694381.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2]
gi|110648633|emb|CAL18109.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2]
Length = 251
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 34/146 (23%)
Query: 79 SIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNI-------------HSLHGIGGS--LRI 122
+F YN+ + + G E + Y +D++ + I + L I
Sbjct: 78 GVFTSYNMALNDRWIVGAE--LAYQGSNTSDSVKSIPGDPLAGNQTEAEVEINQTFLLGI 135
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGK---------------AGEITPIAIGGTAGVGV 167
+GGY ++ S L Y+T+ + + + G +G+
Sbjct: 136 KGGYLLNASTLAYSTLSATLTEVEVNSDCPSDGTVCNPGSPARSDSDDDNITGWALALGL 195
Query: 168 EVGGLSESLVARLEYRASKYSKVEGF 193
E LSE+L R EYR +
Sbjct: 196 EKS-LSENLSVRAEYRYADLGTANVT 220
>gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
Length = 353
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 33/214 (15%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++ALA F + AQAA Y + ++ +
Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PNDNTWYAGAKLGWSQYHDTGLT 45
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP---VLADNIHSLHGIGG- 118
+ A + G F GY V G E + Y G
Sbjct: 46 GNGYNVTNAAQNQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMKYNGGNQGSFKAQGV 100
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSESLV 177
L + Y + D L +Y +G V++ +G + A VGVE ++++
Sbjct: 101 QLSAKLSYPIVDDLDIYTRLGGFVSRTDSHDNSGLNDHDTGVSPLAAVGVEY-AITKNWA 159
Query: 178 ARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
RL+Y+ S V G + +S+GV +F
Sbjct: 160 TRLDYQWVNNIGDASTVGGRPDNGLLSVGVSYRF 193
>gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617]
gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae]
gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617]
Length = 351
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 32/167 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140
G E + Y + + + G+ L + GY ++D L +Y +G
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
A TG++ + + GVE ++ + RLEY+ +
Sbjct: 126 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTN 171
>gi|119776561|ref|YP_929301.1| outer membrane protein [Shewanella amazonensis SB2B]
gi|119769061|gb|ABM01632.1| outer membrane protein, putative [Shewanella amazonensis SB2B]
Length = 189
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 54 NGPYAGLSALYNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
G Y G + + G+ + G + GYN +G+E ++ + + D +
Sbjct: 25 TGFYVGGAINQVKASGDGEGSSDGVGFGAYGGYNF---NEWFGLEANLFASGDLGEDGVD 81
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G + + Y +D+ +A VG + G T GVGV
Sbjct: 82 VGAG-ALTFTPKFTYHFNDTFSAFAKVGVASMAVVVDYGPFDADYTGWGLTWGVGVNA-A 139
Query: 172 LSESLVARLEY 182
L+E L RL Y
Sbjct: 140 LTEKLNLRLSY 150
>gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040805|gb|ACT57601.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 225
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 57/193 (29%), Gaps = 27/193 (13%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ +S L L F SA AD G P V F G Y
Sbjct: 17 IILSGLFLGFFSSAAMAD---------YGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDH 67
Query: 68 FGEEAHHNAG-GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126
N + G + +D ++YG V I + G+L R G+
Sbjct: 68 QSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGID-GDKVAGTLLFRTGF 126
Query: 127 EVSD-------SLLLYATVGPDVAQKYETGKAGEITPI-----AIGG---TAGVGVEVGG 171
+ + L+Y G + A A G GVG+E
Sbjct: 127 TFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIE-KK 185
Query: 172 LSESLVARLEYRA 184
L+ L R EYR
Sbjct: 186 LASMLSIRGEYRY 198
>gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1]
gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1]
Length = 343
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 54/168 (32%), Gaps = 24/168 (14%)
Query: 57 YAGLSALYNGSFG-------EEAHHNAGGSIFAGYN-VEDSCIMYG----VEGDVRY-TV 103
Y G + + F GY + + G E Y
Sbjct: 37 YLGGKLGAMKYQNACEEWAVDCDGTDVALGGFIGYQVWQHWGLELGYLDFGEAKALYPEG 96
Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG-- 161
+ S+ GI S+ R V+D+L +A G Q +G + G
Sbjct: 97 GRVNQYSGSMSGIEMSVVGRI--SVTDNLDAFAKAGTLYWQGKNSGPT--RSLTDDGWAP 152
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVE----GFYNTISLGVGMKF 205
TAGVG+E S R+EY+ + + +LG+ +F
Sbjct: 153 TAGVGLEYH-FSNHWAGRVEYQYVNALGSDKLGGSNGHLATLGIVYRF 199
>gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82]
gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74]
Length = 351
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 32/167 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140
G E + Y + + + G+ L + GY ++D L +Y +G
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125
Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
A TG++ + + GVE ++ + RLEY+ +
Sbjct: 126 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTN 171
>gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168]
gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168]
Length = 351
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 32/167 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140
G E + Y + + + G+ L + GY ++D L +Y +G
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
+ TG + + + G+E ++ + RLEY+ +
Sbjct: 126 DTKSHNNLTGASTKDHDTGVSPVFAGGIE-WAMTRDIATRLEYQWTN 171
>gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont]
Length = 356
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 68/220 (30%), Gaps = 40/220 (18%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57
+ ++ALA F + AQAA Y + ++ G Y
Sbjct: 1 MKKTAIAITVALAGFATVAQAA---------------PKDDTWYTGAKLGWSQYHDTGYY 45
Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
Y + G G F GY + G E + + +
Sbjct: 46 ---GNGYENNDGPTHESQLGAGAFLGY---QANPYLGFELGYDWLGRMPNKGNVTNGAFK 99
Query: 118 G---SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEV 169
L + Y ++D L +Y +G G I+ G + A VGVE
Sbjct: 100 AQGVQLAAKLSYPIADDLDVYTRLGGMVWRADSTQTNPDNGRISNHNTGVSPLAAVGVEY 159
Query: 170 GGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
L+++ RL+Y+ V + L VG+ +
Sbjct: 160 -ALTKNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198
>gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 348
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 55/172 (31%), Gaps = 19/172 (11%)
Query: 38 VPTIATNRYVPIRHDFNGPYAGLSAL----------YNGSFG-EEAHHNAGGSIFAGYNV 86
+P N YAG+ Y G + +FAGYN+
Sbjct: 9 LPLALIISTAASAATMNPFYAGVRVGGAHYSNFQQNYQDVTGINLNKDDVAAGLFAGYNI 68
Query: 87 EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ VE YT A H+ L + + ++D ++ +G
Sbjct: 69 TP---WFAVET--GYTWLGEAKFQHNKIKQHAFDLTGKATWHLNDKWGVFGKLGGSYMLT 123
Query: 146 YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR-ASKYSKVEGFYNT 196
G + + GT G GVE L++ L RLEY+ + N
Sbjct: 124 DFHGYGIKDIDEHLVGTVGAGVEYQ-LTDHLSTRLEYQLYHDLKSNPRYTNQ 174
>gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 325
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 57 YAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
Y G A + S E + N G +FAGY V + +
Sbjct: 28 YVGARAGASFLTNMDDAVTSVTEIQNTNFAGGVFAGYQVTPWFALETGYTHLGNAKLDNG 87
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG--TAGV 165
+ G L + + +DSL +YA G G + G TAG
Sbjct: 88 QGSYEAQGAD--LVTKFSFSATDSLDIYAKAGAFYYDWNAIGSGVTNSD--NGWSPTAGA 143
Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFY 194
G+E ++++L RLEY+ Y+ V G
Sbjct: 144 GLEY-FINKNLSTRLEYQY--YNDVGGPD 169
>gi|148555268|ref|YP_001262850.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1]
gi|148500458|gb|ABQ68712.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1]
Length = 273
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 50/180 (27%), Gaps = 63/180 (35%)
Query: 52 DFNGPYAGLSALY-----------------NGSFGEEAHHNAGGS--------------- 79
++ G Y G Y +G+FG+ + A GS
Sbjct: 29 NWTGFYVGGQLGYAWQPRDGDEQVLFDRNLDGNFGDAFPNFAPGSCGGAPTSASPATGCA 88
Query: 80 ---------IFAGYNVEDSCI---MYGVEGDVRYTVPVLAD----------NIHSLHGIG 117
+ AGY+ + + G + T + + G
Sbjct: 89 KDNDGTTWKVHAGYDYQFGETSGPVIGAVAEYGKTYLYDNVTAFSTTPAVYKMQAKMRSG 148
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVA---------QKYETGKAGEITPIAIGGTAGVGVE 168
G+LR RGGY L+Y T G + + A G G G+E
Sbjct: 149 GALRARGGYSFDTGTLIYGTGGLAYGKIRNSFSTSNGVNSFTVDGASKDAWGYNYGGGIE 208
>gi|296157513|ref|ZP_06840348.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
gi|295892285|gb|EFG72068.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
Length = 160
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 30/173 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95
+ + + F GPY G N G + +H AGYN + + G
Sbjct: 9 AQSVQPLSSASQFAGPYLGFKVGVNSSNASGVISKASHTTVFPGFTAGYNFDIDRFIVGA 68
Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
E G + + G + +L Y +G G+
Sbjct: 69 EAFADLHHGSTTYK-------DGGIDAKFGMPF-NQILPYVRIG----------FTGDDP 110
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
G+G+E + + A E+ + S +G N+ ++G+ F
Sbjct: 111 DTRFHW--GLGIEY-KFARHISAIGEWT-TDTSNHDGTKRTNNSFTIGLQYHF 159
>gi|148980016|ref|ZP_01815837.1| hypothetical protein VSWAT3_06776 [Vibrionales bacterium SWAT-3]
gi|145961459|gb|EDK26763.1| hypothetical protein VSWAT3_06776 [Vibrionales bacterium SWAT-3]
Length = 202
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 25/170 (14%)
Query: 55 GPYAGLSALYNGS-----FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV--PVLA 107
G Y G + G + G S++ GY + G+E + YT +
Sbjct: 39 GSYIGAGLGVHQDSDTDGGGNLDAESMGYSLYGGYQF---NRIVGIE--LGYTDYADYES 93
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167
S+ GY +S+ + G G GVGV
Sbjct: 94 YGTKVFSPTSLSVAANLGYTFDNSIRPFVLAGLSYVDLNANSSNAFDDDSGAGFRFGVGV 153
Query: 168 EVGGLSESLVARL------------EYRASKYSKVEGFYNTISLGVGMKF 205
E + ++L RL + R ++ + ++T++LG F
Sbjct: 154 EYTPV-DNLTLRLISQADAVNIEFFDSRGNRLQSRDVAFSTVTLGASYNF 202
>gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
Length = 342
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 32/167 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 7 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 60
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140
G E + Y + + + G+ L + GY ++D L +Y +G
Sbjct: 61 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 116
Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
A TG++ + + GVE ++ + RLEY+ +
Sbjct: 117 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTN 162
>gi|56696999|ref|YP_167361.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
gi|56678736|gb|AAV95402.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 178
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG--SIFAGYNVEDSC-IMYGVE 96
++ + D++G Y GL Y + G A GYN + + G E
Sbjct: 16 AVSMAAAPAMAGDWSGAYLGLGVGYGDADGPGARDGEAASFGGHIGYNFDLGNRFVMGGE 75
Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
+ L +L I G L+++ GY+ +L Y +G A
Sbjct: 76 LEYDRVNNDLGAGGGTLDEI-GRLKVKAGYDF-GPVLGYGVLGAARA 120
>gi|145298279|ref|YP_001141120.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851051|gb|ABO89372.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 352
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 26/162 (16%)
Query: 49 IRHDFNGPYAGLSALY-----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRY- 101
+D+ Y G + G FG++A +A ++F GYN ++ G E + Y
Sbjct: 23 PVNDW---YVGAGGGWAIAHDLGDFGKDASKDATALTLFGGYNFTEN---LGAE--LGYL 74
Query: 102 ---TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158
V + S G S+ R + D ++A G + +
Sbjct: 75 STGDWDVQGTD-FSSQGATLSVIGRL--PLGDIFSVFAEGGGYLYHVKSINGGDDNLAPL 131
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
AG+G+ L + + + YR + + + G
Sbjct: 132 ----AGLGL-TAKLHDWVDIQARYRYLVRVGDDSDNDKVGSG 168
>gi|149185443|ref|ZP_01863759.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
gi|148830663|gb|EDL49098.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
Length = 200
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 24/174 (13%)
Query: 55 GPYAGLSALYNG-------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
G Y G Y G + +A I AGY++ G+EG++ + +
Sbjct: 28 GLYVGAIGGYEGVDVESADGTATASADSAVYGINAGYDLSLGGAFVGIEGELSTSNGDTS 87
Query: 108 -----DNIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQK---YETGKAGEITPI 157
GG + R G+ ++ + Y VG +G G++
Sbjct: 88 FPDSFGGAREGLETGGQYYIGARAGFALTPGIAAYGKVGYTALDTTAFTSSGSLGDLKEN 147
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV------EGFYNTISLGVGMKF 205
A G G G++V L L ARLEYR SKY+ + + + + G+ ++F
Sbjct: 148 ADGLRYGAGLQV-ALPGPLEARLEYRRSKYNDLADVDQGDAMTDQVVAGLAVRF 200
>gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 38/187 (20%)
Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111
YAG A + + + H GG Y + + + YGV G +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85
Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145
+ G +R + YEV +L +Y VG + +
Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145
Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198
Y + + I G G+E ++ L AR+EY+ ++ V+ T+S
Sbjct: 146 YVQQHVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204
Query: 199 LGVGMKF 205
+ G F
Sbjct: 205 IPTGTNF 211
>gi|312885261|ref|ZP_07744938.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367068|gb|EFP94643.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 323
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 24/162 (14%)
Query: 54 NGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNV-EDSCIMYGVEGDVRYTVPVL 106
Y G + + ++ +AGY + I G+E Y
Sbjct: 20 ANVYVGGKVGKSWMDDACVAGQPCDDEDSTYGAYAGYEFNQKIAIEGGIERLGNYDKSAF 79
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
N+ + +L + V+ + LY VG + G+ +G G
Sbjct: 80 NGNVQAF-----TLAPKFSLPVTPDIALYGKVGGAYTK-----FDGKDDYSYLG---AAG 126
Query: 167 VEVGGLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
VE +S ++ AR EY+A + + + N+ ++G+ KF
Sbjct: 127 VEFN-ISSNVTARAEYQALTDINNDVTKAMGNSATIGISYKF 167
>gi|119385191|ref|YP_916247.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222]
gi|119374958|gb|ABL70551.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222]
Length = 239
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 73/245 (29%), Gaps = 49/245 (20%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+F ++ +S+ L + A P + P + G Y G +
Sbjct: 1 MFKSIAISTSVLLAAVPAFGG-----GFTIPVVETPVVMPQEVAPAIGSWEGLYLGGALG 55
Query: 64 YNGSFGEEAHHNAGGS-----------------IFAGYNVEDS----CIMYGVEG--DVR 100
+ + G + GY + I+ G E +
Sbjct: 56 SAFGSDDRVGISQPGGGAAYTPGSVDIRGATFSLQMGYRWQREVRGRQIVTGPELAYEAG 115
Query: 101 YTVPVLAD-NIHSLHGIGG--SLRIRGGY-EVSDSLLLYATVGPD-VAQKYETGKAG--- 152
+ + + G SLR + G ++ LL Y +VG + Y AG
Sbjct: 116 GADDSFSRAGESASSELNGLLSLRWKTGVLNEAEDLLFYGSVGIAHGSFDYTVTGAGMRY 175
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLG 200
+ T G+GVE L+E E+ ++ K ++I +G
Sbjct: 176 DGDFTDSALTVGLGVE-KRLNERASLFGEWEFRQFGKTTLTDAAGYTTRATPEHHSIRVG 234
Query: 201 VGMKF 205
V F
Sbjct: 235 VNFAF 239
>gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 372
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 63/187 (33%), Gaps = 38/187 (20%)
Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111
YAG A + + + H GG Y + + + YGV G +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85
Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145
+ G +R + YEV +L +Y VG + +
Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145
Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198
Y + + + I G G+E ++ L AR+EY+ ++ V+ T+S
Sbjct: 146 YVQQRVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204
Query: 199 LGVGMKF 205
+ G F
Sbjct: 205 IPTGTNF 211
>gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 38/187 (20%)
Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111
YAG A + + + H GG Y + + + YGV G +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85
Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145
+ G +R + YEV +L +Y VG + +
Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145
Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198
Y + + I G G+E ++ L AR+EY+ ++ V+ T+S
Sbjct: 146 YVQQHVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204
Query: 199 LGVGMKF 205
+ G F
Sbjct: 205 IPTGTNF 211
>gi|84684753|ref|ZP_01012653.1| hypothetical protein 1099457000245_RB2654_02554 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667088|gb|EAQ13558.1| hypothetical protein RB2654_02554 [Rhodobacterales bacterium
HTCC2654]
Length = 167
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 6/111 (5%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIH 111
F+G Y G F + A + +AGYN + G E +V+Y +
Sbjct: 30 FDGFYLGAFI--QNDFAKAAGLDGAVGAWAGYNYGFGNGFILGAEAEVQYDWA--TSQVP 85
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDV-AQKYETGKAGEITPIAIGG 161
+ G + R GY + ++YA G + G A+GG
Sbjct: 86 AGSAFTGLVNARAGYATASDFMIYAKGGAGFMSGAGFIYDFGAGAEYALGG 136
>gi|170750246|ref|YP_001756506.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656768|gb|ACB25823.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 287
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 51/209 (24%), Gaps = 73/209 (34%)
Query: 53 FNGPYAGLSALYNGS--------------------------FGEEAHHNAGGSIFAGYNV 86
+ G YAGL + Y + A AGYN
Sbjct: 42 WTGFYAGLESAYTFTDRERITTVGVQPGNATNVALGRRPFATSTTQDGFANIGGTAGYNY 101
Query: 87 ED---SCIMYGVEGDVRYTVPVLADNIHS----------------LHGIGGSLRIRGGYE 127
+ + I+ G+ + +T + G+L R GY
Sbjct: 102 QFTPGAGIVVGIANSIDWTDITKNRVVLGTGNVAGGPPNISQFRQSLDWLGTLTGRVGYA 161
Query: 128 VSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAGVGVEVGGLSES-- 175
D +L+Y G + AG G G G+E ++S
Sbjct: 162 F-DRVLVYGMGGLAYGNVFHDANFYTPGGRLQFAGRYDDFKTGFAYGGGIEFALPTDSFL 220
Query: 176 ---------------LVARLEYRASKYSK 189
+ + EY
Sbjct: 221 NTFALGRYIGIKYDAITVKAEYLHYDLGS 249
>gi|77360562|ref|YP_340137.1| TonB-dependent receptor protein [Pseudoalteromonas haloplanktis
TAC125]
gi|76875473|emb|CAI86694.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Pseudoalteromonas haloplanktis
TAC125]
Length = 189
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 98 DVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKY--ETGKAGEI 154
++ Y ++ S I G SL R GY +++S +YA G + G +
Sbjct: 77 ELAYQNFDEVSDVDSKAEIDGVSLAARLGYPITESFSVYAKGGWLEWDAEYTQDLPVGSV 136
Query: 155 TPIAIGGTA--GVGVEVGGLSESLVARLEY-RA 184
+ GG A G G+E L+ ++ RLEY R
Sbjct: 137 SASTDGGDAFYGAGIEY-ALTTNVQFRLEYERY 168
>gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661]
gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661]
Length = 357
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 67/221 (30%), Gaps = 41/221 (18%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57
+ ++ALA F + AQAA Y + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQYHDTGYY 45
Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
Y + G G F GY + G E + + +
Sbjct: 46 ---GNGYANNDGPTHESQLGAGAFGGY---QANQYLGFELGYDWLGRMPNKGNVTNGAFK 99
Query: 118 G---SLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAIGGTAGVGVE 168
L + Y ++D L +Y +G Q TG + A VGVE
Sbjct: 100 AQGVQLAAKLSYPITDDLDVYTRLGGMVWRADSTQQNTITGNRQSDHDTGVSPLAAVGVE 159
Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
L+++ RL+Y+ V + L +G+ +
Sbjct: 160 Y-ALTQNWATRLDYQWVNNIGDAQTVGARPDNGMLALGVSY 199
>gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 374
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 29/183 (15%)
Query: 46 YVPIRHDFNGPYAGLSA---LYNGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEGDV 99
Y + + + GL+ Y+ G N +F GY + + +G+ ++
Sbjct: 27 YAGAKAGWASFHDGLTQFDNTYDYGSGINLGINRNSVTYGVFGGYQILNQNN-FGLATEL 85
Query: 100 RYTV-------PVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQK-- 145
Y + + S + YEV +L +Y VG + +
Sbjct: 86 GYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145
Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
Y + + I + G G+E ++ L AR+EY+ ++V +
Sbjct: 146 YVQQHVDKDSRIKVHNLKPSLLLGAGLEY-AITPELAARVEYQY--LNRVGNLDKAVRTT 202
Query: 201 VGM 203
VG
Sbjct: 203 VGY 205
>gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 21/159 (13%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYN-VEDSCIMYGVEGDVRYT 102
YV + + + GL+ + GE ++ +F GY + + E Y
Sbjct: 27 YVGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNNFGLATELGYDYF 86
Query: 103 VPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGK 150
V + + G L ++ YEV +L +Y VG + + Y
Sbjct: 87 GRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQN 146
Query: 151 AGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184
+ + I G G+E ++ L AR+EY+
Sbjct: 147 VAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184
>gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 351
Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 27/170 (15%)
Query: 56 PYAGLSALYNGSFGEEAH------HNAGGSIFAGYNVEDSCIMYGVEGDV-RY---TVPV 105
YAG + G S+F+G+ Y +EG + Y +
Sbjct: 42 FYAGQKLGWARYSNNCDDKVNCKIDTFGYSVFSGFQF---NRWYALEGSISNYGSPDYKI 98
Query: 106 LADNIHSLHG-IGGSL--RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGT 162
+D I S GG + + R +++ L YA +G +Y + G
Sbjct: 99 NSDFIESNTSIWGGEILSKFRV-LDITSHLHAYAKLGL--GYQYLNQPSSYTNKSHYFGL 155
Query: 163 AGV-GVEVGGLSESLVARLEYRASKYSKVEGFYNTIS------LGVGMKF 205
G G+E +++ R E + + + E +N +G+ KF
Sbjct: 156 LGAAGLEYD-ITDQWSLRAEVQHIDFKEKEDNFNQGKDVTFSSIGLSYKF 204
>gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
Length = 357
Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 38/187 (20%)
Query: 48 PIRHDFNGPYAGLSALYNGS------------------FGEEAHHNAGGSIFAGYNVEDS 89
P + + Y G ++ G++ G ++AGY
Sbjct: 23 PKDNTW---YTGGKLGWSHYEHAKFTFEDAAGDETSVGTGKKTRDQLGAGLYAGYQYNQ- 78
Query: 90 CIMYGVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y DN S+ +G SL + Y V + L +Y +G V +
Sbjct: 79 --YMGFE--MGYDWFGKMKYKGDNAGSVSSMGVSLTTKLSYPVMEDLDVYTRLGGMVYRT 134
Query: 146 YET-GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYNT-----IS 198
G+ T + +G+E ++ L RL+Y+ S+ + + +S
Sbjct: 135 EAKVNGVGKETDTGVSPVYALGLEY-AITPELATRLDYQWVSRMGDKDNIGVSPDNGMLS 193
Query: 199 LGVGMKF 205
+G+ +F
Sbjct: 194 VGLAYRF 200
>gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
Length = 356
Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 66/220 (30%), Gaps = 40/220 (18%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57
+ ++ALA F + AQAA Y + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDDTWYTGAKLGWSQYHDTGYY 45
Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
Y + G G F GY + G E + + +
Sbjct: 46 ---GNGYENNNGPTHESQLGAGAFVGY---QANPYLGFELGYDWLGRMPNKGTVTNGAFK 99
Query: 118 G---SLRIRGGYEVSDSLLLYATVG-----PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
L + Y + D L +Y +G D Q T + A VGVE
Sbjct: 100 AQGVQLAAKLSYPIYDDLDVYTRLGGMVWRADATQTNPTTGRISDHDTGVSPLAAVGVEY 159
Query: 170 GGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
L+++ RL+Y+ V + L VG+ +
Sbjct: 160 -ALTKNWATRLDYQWVNNIGDAQTVGTRPDNGMLSVGVSY 198
>gi|89055673|ref|YP_511124.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88865222|gb|ABD56099.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 196
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 16/169 (9%)
Query: 28 RRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH------HNAGGSIF 81
RR + AT + G YAG + + + G +
Sbjct: 2 RRTVYAIALATAVSATGAAAQDASQWTGFYAGFATNIISPEFDNSTATTPLQEGTGFGAY 61
Query: 82 AGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGIGG----SLRIRGGYEVSDSLLLYA 136
GYN + G E + ++ P + + R+RGGY + + L+Y
Sbjct: 62 GGYNYAFGDNFVVGAE--LGFSGPATFQTTLGANDFEFERVLNARVRGGYAMGN-ALVYG 118
Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
T+G + Y A G G+G+E+ L++ + RL+Y ++
Sbjct: 119 TLGYQTVE-YGASAGVSTEGAADGLVYGIGLEML-LNDQVSVRLDYTST 165
>gi|27379463|ref|NP_770992.1| hypothetical protein blr4352 [Bradyrhizobium japonicum USDA 110]
gi|27352615|dbj|BAC49617.1| blr4352 [Bradyrhizobium japonicum USDA 110]
Length = 154
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 10/99 (10%)
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--------GK 150
+ D + ++ R G+ V ++ L Y G +
Sbjct: 18 LNTAFGAGDDVFSWRANVLATVVGRAGFAVQNN-LFYIKGGYAGVNNRLSVSDTVGPATG 76
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+G T A G T G G E G++ + + LEY + +
Sbjct: 77 SGGQTHWANGWTVGAGWEY-GVTRNWIVGLEYNYAAFGS 114
>gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 63/187 (33%), Gaps = 38/187 (20%)
Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111
YAG A + + + H GG Y + + + YGV G +
Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFDLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85
Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145
+ G +R + YEV +L +Y VG + +
Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145
Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198
Y + + + I G G+E ++ L AR+EY+ ++ V+ T+S
Sbjct: 146 YVQQRVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204
Query: 199 LGVGMKF 205
+ G F
Sbjct: 205 IPTGTNF 211
>gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541]
gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541]
Length = 353
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 48 PIRHDFNGPYAGLSALYNGS--------------FGEEAHHNAGGSIFAGYNVEDSCIMY 93
P + + Y G ++ G++ G ++AGY
Sbjct: 23 PKDNTW---YTGGKLGWSHYEHAKFTDEAGDTVGTGKKTRDQLGAGLYAGYQYNQ---YM 76
Query: 94 GVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET- 148
G E + Y N S+ +G SL + Y + + L +Y +G V +
Sbjct: 77 GFE--MGYDWFGKMKYKGTNPGSVSSMGVSLTTKLSYPIMEDLDVYTRLGGMVYRTEAKV 134
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA------SKYSKVEGFYNTISLGVG 202
+G+ T + +GVE ++ L RL+Y+ V +S+G+
Sbjct: 135 NNSGKETDTGVSPVYALGVEY-AITPELATRLDYQWVSGMGDKDNIGVSPDNGMLSVGLA 193
Query: 203 MKF 205
+F
Sbjct: 194 YRF 196
>gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 33/187 (17%)
Query: 46 YVPIRHDFNGPYAGLSA---LYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGV 95
Y + + + GL+ Y+ G N G +F GY + + +G+
Sbjct: 27 YAGAKAGWASFHDGLTQFDNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNN-FGL 85
Query: 96 EGDVRYTV-------PVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVA 143
++ Y + + S + YEV +L +Y VG +
Sbjct: 86 ATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALV 145
Query: 144 QK--YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
+ Y + + I + G G+E ++ L AR+EY+ ++V
Sbjct: 146 RNDYYVQQHVDKDSRIKVHNLKPSLLLGAGLEY-AITPELAARVEYQY--LNRVGNLDKA 202
Query: 197 ISLGVGM 203
+ VG
Sbjct: 203 VRTTVGY 209
>gi|300023990|ref|YP_003756601.1| hypothetical protein Hden_2484 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525811|gb|ADJ24280.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 495
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 63/200 (31%), Gaps = 51/200 (25%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGE---EAHHNAGGSIF--------------- 81
+ P+ + G Y G+ Y + + GSIF
Sbjct: 249 EAPDDSIPPVTSSWTGAYLGVGGGYGVAKNTLELSDRSSEPGSIFSAGIPFGHDGGILFA 308
Query: 82 -AGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI--------------RGG 125
AGY+ + + G GD Y+ ++++ +R R G
Sbjct: 309 TAGYDYQISPRFVIGAFGDADYSHLKQSNSLSFAIDEDAEIRAGTKTQLKNMLMVGGRIG 368
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKA----GEITPIAIGGT------------AGVGVEV 169
Y LL+ + G + +T A + +A GGT G G+E
Sbjct: 369 YLARPDTLLFLSGGYANVEADDTNLALGISVDGETVAGGGTTLISGRRLSGGFIGGGIET 428
Query: 170 GGLSESLVARLEYRASKYSK 189
L++SL + EYR
Sbjct: 429 R-LNDSLSLKAEYRYIDLGS 447
Score = 42.3 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 47/186 (25%)
Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------------------GSIFAGYN 85
+D+ G G+ Y G + + G ++ AGY+
Sbjct: 25 ASANDWEGISLGVGGGY-GMTKNDLNLGTGPAISSFIDANIGINGFGGSGGFATLSAGYD 83
Query: 86 -VEDSCIMYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLL 133
V ++ G D ++ NI S+ R GY ++ + L
Sbjct: 84 HVLFGPLVVGAFIDYDFSDISTNIGAGSELGEIDANIKFKIENQLSIGGRIGYLIAPTTL 143
Query: 134 LYATVGPDVAQKYET-----------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
++T G A+ + G G G GVE +S + EY
Sbjct: 144 FFSTFGYAHAESSDIKANLNIGGGSGGGTLAGVGSFDGYFLGGGVETL-ISNGFSIKAEY 202
Query: 183 RASKYS 188
R +
Sbjct: 203 RYTSLQ 208
>gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703]
gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech703]
Length = 354
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 42/220 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY-AG 59
M+K +A+ V+ A AQAA Y + ++ + G
Sbjct: 1 MKKTAIAIAVAGFATV----AQAA---------------PNDNTWYAGGKLGWSQFHDTG 41
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV------PVLADNIHSL 113
L+ + + + G +F GY + G E + Y +
Sbjct: 42 LNGSGYQTTNDAQENQLGAGVFGGY---QANPYLGFE--MGYDWLGRMKYTGVNRGNFKA 96
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G+ L + Y + D L +Y +G A ++ + A VGVE
Sbjct: 97 QGVQ--LAAKLSYPIVDDLDVYTRLGGFVWRADSHDDVSGNSGHDTGVSPLAAVGVEY-A 153
Query: 172 LSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
++++ RL+Y+ S V G + +S+GV +F
Sbjct: 154 ITKNWATRLDYQWVNNIGDASTVGGRPDNGLLSVGVSYRF 193
>gi|148974245|ref|ZP_01811778.1| hypothetical protein VSWAT3_13997 [Vibrionales bacterium SWAT-3]
gi|145965942|gb|EDK31190.1| hypothetical protein VSWAT3_13997 [Vibrionales bacterium SWAT-3]
Length = 190
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 48/149 (32%), Gaps = 18/149 (12%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYE 127
G G +++ GY + GVE + Y + S+ GY
Sbjct: 48 GNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKQGTAKVSPTSVSVSANLGYT 102
Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR-------- 179
+++ + G AG G G+GVE + E+L R
Sbjct: 103 FDNTIRPFVLAGLSSVDLNANKSAGYDDDSGTGFHFGLGVEYTPI-ENLTLRLISQADAV 161
Query: 180 -LEYRASKYS--KVEGFYNTISLGVGMKF 205
+E +Y ++++SLG F
Sbjct: 162 SVENYYGQYKTDDKTLAFSSVSLGGSYNF 190
>gi|90578366|ref|ZP_01234177.1| outer membrane protein, putative [Vibrio angustum S14]
gi|90441452|gb|EAS66632.1| outer membrane protein, putative [Vibrio angustum S14]
Length = 189
Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 24/170 (14%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGG-SIFAGYNVEDSCIMY 93
+ T D GPY G S + N ++ GYN ++
Sbjct: 11 VLTTASGAALADQTGPYVGASLGNATTDLKADHWEHNYDENVVAYGLYGGYNFNEN---L 67
Query: 94 GVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA------QKYE 147
G+E + T + + G +L R ++D L L+A G
Sbjct: 68 GLEATLGQT----GEQDNIKKGY-ATLTPRVMMPLNDQLSLFAKAGVAYVAVDGDYDGIG 122
Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVAR--LEYRASKYSKVEGFYN 195
+I G TAG GV ++E + R ++Y ++ K + +
Sbjct: 123 NMNRHDIDVDGFGWTAGAGVNF-AVAEHIDLRAGIDYLSTDLEKADNDKD 171
>gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica]
gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 33/187 (17%)
Query: 46 YVPIRHDFNGPYAGLSA---LYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGV 95
Y + + + GL+ Y+ G N G +F GY + + +G+
Sbjct: 27 YAGAKAGWASFHDGLTQFDNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNN-FGL 85
Query: 96 EGDVRYTV-------PVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVA 143
++ Y + + S + YEV +L +Y VG +
Sbjct: 86 ATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALV 145
Query: 144 QK--YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
+ Y + + I + G G+E ++ L AR+EY+ ++V
Sbjct: 146 RNDYYVQQHVDKDSRIKVHNLKPSLLLGAGLEY-AITPELAARVEYQY--LNRVGNLDKA 202
Query: 197 ISLGVGM 203
+ VG
Sbjct: 203 VRTTVGY 209
>gi|310816739|ref|YP_003964703.1| TonB-dependent heme/hemoglobin receptor family protein
[Ketogulonicigenium vulgare Y25]
gi|308755474|gb|ADO43403.1| TonB-dependent heme/hemoglobin receptor family protein
[Ketogulonicigenium vulgare Y25]
Length = 1121
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 66/216 (30%), Gaps = 57/216 (26%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSAL----------YNGSF----------GEEAHHNAGGS 79
++ P ++ G YAGL+ Y G + A +A
Sbjct: 877 DARSSAVQPFDGNWGGAYAGLTFGAARFAAEGETYAGDGSYNANAAIERTDTAASSAVAG 936
Query: 80 IFAGYNVEDSC-IMYGVEGDVRYT--------------VPVLADNIHSLHGIGGS----- 119
+ GY + ++ GVE V + V +N S
Sbjct: 937 LQFGYRKQQDSGLVLGVEASVDFARGRAQQYMIDETLDVDRWGENNTRAADYTHSWGATA 996
Query: 120 -LRIRGGYEVSDSLLLYATVGPDVAQKYET--------------GKAGEITPIAIGGTAG 164
LR G + L AT G + ++++T + + + G G
Sbjct: 997 MLRGSVGQTFGRAHLF-ATAGLGMMEEHQTRTQYRLVSGIVNYPSFSETDSQLRTGVVVG 1055
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
G++ S +L R EY Y + ++ S G
Sbjct: 1056 AGMDY-AFSNALSLRGEYVYGYYPEKNFNFDRASNG 1090
>gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 21/159 (13%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYN-VEDSCIMYGVEGDVRYT 102
Y + + + GL+ + GE ++ +F GY + + E Y
Sbjct: 27 YAGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNNFGLATELGYDYF 86
Query: 103 VPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGK 150
V + + G L ++ YEV +L +Y VG + + Y
Sbjct: 87 GRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQN 146
Query: 151 AGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184
+ + I G G+E ++ L AR+EY+
Sbjct: 147 VAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184
>gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 21/159 (13%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYN-VEDSCIMYGVEGDVRYT 102
Y + + + GL+ + GE ++ +F GY + + E Y
Sbjct: 27 YAGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNNFGLATELGYDYF 86
Query: 103 VPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGK 150
V + + G L ++ YEV +L +Y VG + + Y
Sbjct: 87 GRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQN 146
Query: 151 AGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184
+ + I G G+E ++ L AR+EY+
Sbjct: 147 VAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184
>gi|326424195|ref|NP_762179.2| membrane protein [Vibrio vulnificus CMCP6]
gi|319999579|gb|AAO07169.2| membrane protein [Vibrio vulnificus CMCP6]
Length = 195
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 26/175 (14%)
Query: 50 RHDFNGPYAGLSALYNGSFGEE--------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
+ D +G Y G +F + +++ ++ GY + +E
Sbjct: 28 KKDVSGFYLGGGIGTTTAFDDGVGTNDLNLKSNDSTYKLYGGYQF---NRIVAIEAQYTR 84
Query: 102 TVPVLADNIHSLHGI---GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158
+ + + H + +L GY +ATVG + G ++
Sbjct: 85 YGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRTEL----DFGPLSKTE 140
Query: 159 IGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYNTISL-------GVGMKF 205
AGVG E E+L R+ Y + G + I++ GV KF
Sbjct: 141 TSFRAGVGGEYSPKAIENLNFRVAYEVDSFMFDNGPRDDINIVLGSLYAGVSYKF 195
>gi|253699032|ref|YP_003020221.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773882|gb|ACT16463.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 459
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 66/207 (31%), Gaps = 34/207 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K V V +L L F A A V PY
Sbjct: 1 MKKFPQLVLVPALLLGLFTQAFA----------------------EVKPESFSVSPYV-- 36
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLHGIGG 118
A Y+ E + GYN +G+E + Y T I + +
Sbjct: 37 -AGYSFLGRERLETGPAAGLRGGYNFTSH---FGLEAVLTYISTEGKAYSGIGDVDALNY 92
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178
L + + L+ Y +G + GE+ A G GV+ L++++
Sbjct: 93 HLDMLYHFMPESMLVPYLAMGY-GGHWRDYEGDGEVNRSAFNY--GGGVKY-FLTDAMAL 148
Query: 179 RLEYRASKYSKVEGFYNTISLGVGMKF 205
R + R + ++ + GVG+ F
Sbjct: 149 RGDVRHIVMRDHDDTFHNLEYGVGVDF 175
>gi|120556596|ref|YP_960947.1| OmpA domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326445|gb|ABM20760.1| OmpA domain protein transmembrane region-containing protein
[Marinobacter aquaeolei VT8]
Length = 192
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 9/162 (5%)
Query: 40 TIATNRYVPIRHDFNGPYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
A + D +GPY S Y GE N GY + +E +
Sbjct: 20 APAVWAQDNVSRDKSGPYISGSYGGYKAHGGEFEDENDLLGAALGYQF---NEFFALEAE 76
Query: 99 VRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
D++ G S R ++DS +YA G + + T
Sbjct: 77 YIDFGNFGDDDVEGKLKGAGLSAIGRL--PLTDSFGVYAKAGAFASAFDVEAFDEDETYD 134
Query: 158 AIGGTAGVGVEVGGLSESLVARLEY-RASKYSKVEGFYNTIS 198
+ G GV+ ++E L A EY R + + F ++
Sbjct: 135 EVNPFVGAGVDFR-VTEQLTAFAEYNRYNVDIDEDDFNGQVT 175
>gi|117618280|ref|YP_855820.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559687|gb|ABK36635.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 351
Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 26/146 (17%)
Query: 49 IRHDFNGPYAGLSALY-----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRY- 101
+D+ YAG+ + G FG++A +A S+F GYN ++ G E + Y
Sbjct: 23 PDNDW---YAGVGGGWAIAHDLGDFGKDASKDATALSLFGGYNFTEN---LGAE--LGYL 74
Query: 102 ---TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158
V N S G S+ R + D ++A G V
Sbjct: 75 STGDWDVQG-NDFSSQGATLSVIGRL--PLGDIFSVFAEGGGYVYHVKSINGGDNNLAPL 131
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA 184
AG+G+ L + + + YR
Sbjct: 132 ----AGLGL-TAKLHDWVDIQARYRY 152
>gi|320158543|ref|YP_004190921.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|319933855|gb|ADV88718.1| membrane protein [Vibrio vulnificus MO6-24/O]
Length = 191
Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 26/175 (14%)
Query: 50 RHDFNGPYAGLSALYNGSFGEE--------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
+ D +G Y G +F + +++ ++ GY + +E
Sbjct: 24 KKDVSGFYLGGGIGTTTAFDDGVGTNDLNLKSNDSTYKLYGGYQF---NRIVAIEAQYTR 80
Query: 102 TVPVLADNIHSLHGI---GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158
+ + + H + +L GY +ATVG + G ++
Sbjct: 81 YGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRTEL----DFGPLSKTE 136
Query: 159 IGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYNTISL-------GVGMKF 205
AGVG E E+L R+ Y + G + I++ GV KF
Sbjct: 137 TSFRAGVGGEYSPKAIENLNFRVAYEVDSFMFDNGPRDDINIVLGSLYAGVSYKF 191
>gi|330447676|ref|ZP_08311324.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491867|dbj|GAA05821.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 186
Score = 43.5 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 27/170 (15%)
Query: 41 IATNRYVPIRHDFNGPYAGLSAL----------YNGSFGEEAHHNAGGSIFAGYNVEDSC 90
+ T D GPY G S +N ++ E ++ GYN ++
Sbjct: 11 VLTTASGAALADQTGPYVGASLGNATTDLKAENWNYNYDENV---VAYGLYGGYNFTEN- 66
Query: 91 IMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150
G+E + T DNI + +L R ++D L+A G +
Sbjct: 67 --LGLEATLGQTGEK--DNIKKGYA---TLTPRVMLPLNDQFSLFAKAGVAYVAADGNWQ 119
Query: 151 AGEITPIAI---GGTAGVGVEVGGLSESLVAR--LEYRASKYSKVEGFYN 195
+ I + G TAG GV ++E + R ++Y ++ + +
Sbjct: 120 DIKRAHIDVDGWGWTAGAGVNF-AVAEHVDIRAGIDYLSTDLKNADNDKD 168
>gi|37676363|ref|NP_936759.1| hypothetical protein VVA0703 [Vibrio vulnificus YJ016]
gi|37200905|dbj|BAC96729.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 195
Score = 43.5 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 26/175 (14%)
Query: 50 RHDFNGPYAGLSALYNGSFGEE--------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
+ D +G Y G +F + ++ ++ GY + +E
Sbjct: 28 KKDVSGFYLGGGIGTTTAFDDGVGTNDLNLKSSDSTYKLYGGYQF---NRIVAIEAQYTR 84
Query: 102 TVPVLADNIHSLHGI---GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158
+ + + H + +L GY +ATVG + G ++
Sbjct: 85 YGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRTEL----DFGPLSKTE 140
Query: 159 IGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYNTISL-------GVGMKF 205
AGVG E E+L R+ Y + G + +++ GV KF
Sbjct: 141 TSFRAGVGGEYSPKAIENLNFRVAYEVDSFMFDNGPRDDVNIVLGSLYAGVSYKF 195
>gi|84385654|ref|ZP_00988685.1| hypothetical protein V12B01_26009 [Vibrio splendidus 12B01]
gi|84379634|gb|EAP96486.1| hypothetical protein V12B01_26009 [Vibrio splendidus 12B01]
Length = 192
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 13/133 (9%)
Query: 55 GPYAGLSALY-----NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV--PVLA 107
GPY G G + G S++ GY + G+E + YT
Sbjct: 26 GPYIGAGLGVYQDSDTDGAGNLDAESMGYSLYGGYQF---NRIVGIE--LGYTDYADYEK 80
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167
L S+ GY +S+ + T G + A G G+GV
Sbjct: 81 FGTKLLSPTSLSVAANVGYTFDNSIRPFVTAGLSYVDLNSSNSAFYGDDSGAGFHFGIGV 140
Query: 168 EVGGLSESLVARL 180
E + E+L RL
Sbjct: 141 EYNPV-ENLTLRL 152
>gi|260433629|ref|ZP_05787600.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417457|gb|EEX10716.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 172
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVR 100
+ D+ GPYAG + Y + G GSI A GY+++ + G E
Sbjct: 14 PVAQMAWAEDWTGPYAGFTFGYTDADGPGGSGGNSGSIGANIGYDLDLGSFVVGGE--FE 71
Query: 101 YTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
Y L +++RGGYE L Y VG A + I +
Sbjct: 72 YDRLNLDLGASEGSLDSVSRVKLRGGYEF-GPALGYVVVGAARANTSSDSDTAAVYGIGV 130
Query: 160 GGTAG 164
G
Sbjct: 131 AYPLG 135
>gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430]
gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430]
gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 355
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 69/216 (31%), Gaps = 32/216 (14%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ ++ALA F + A P + G + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG- 118
Y + G G F GY + G E + Y P D + G
Sbjct: 49 YENNDGPTHESQLGAGAFLGY---QANQYLGFE--LGYDWLGRMPNKGDVTNGAFKAQGI 103
Query: 119 SLRIRGGYEVSDSLLLYATVG-----PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+ + Y ++D L +Y +G D Q T + A VGVE ++
Sbjct: 104 QMAAKLSYPIADDLDVYTRLGGMVWRADATQTNPTYGRISNHDTGVSPLAAVGVEY-AVT 162
Query: 174 ESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
++ RL+Y+ V + L VG+ +
Sbjct: 163 KNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198
>gi|311277854|ref|YP_003940085.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308747049|gb|ADO46801.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 347
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 15/147 (10%)
Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-----IGGSLRIRG 124
+ N GG IF GY + + VEG Y + + + G G L ++
Sbjct: 59 DTNSDNVGGGIFGGY--QINNW-LAVEGGYDYLGNMQFNGNNGAAGGKMKSQGLQLSLKA 115
Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
Y +SDS LY G + + VG E + SL RLEY+
Sbjct: 116 SYGLSDSWDLYGRAGAMGYRAETEAAGHSTFDTGVRPLLAVGTEY-AFTPSLAGRLEYQW 174
Query: 185 -SKYSK-----VEGFYNTISLGVGMKF 205
S + ++++ G+ +F
Sbjct: 175 VSNVGNENQIGMTADASSVTAGIVYRF 201
>gi|320106608|ref|YP_004182198.1| hypothetical protein AciPR4_1381 [Terriglobus saanensis SP1PR4]
gi|319925129|gb|ADV82204.1| hypothetical protein AciPR4_1381 [Terriglobus saanensis SP1PR4]
Length = 192
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 11/129 (8%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
F GY D YGVE ++R+ D + GG Y V +
Sbjct: 70 FGGYATFDWREHYGVELNIRHAKGKQDDGQSENTVEFGGR------YVVVRKYRMAPYAK 123
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NT 196
+ + G + GVGV+ + + R EY + V
Sbjct: 124 AMIGRGVYNYPDGAGSLAFNLYALGVGVDYHA-TSYINVRAEYEYQSWLNVPIQNPQPQL 182
Query: 197 ISLGVGMKF 205
IS+GV +F
Sbjct: 183 ISIGVAYRF 191
>gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617]
Length = 355
Score = 43.1 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 70/216 (32%), Gaps = 32/216 (14%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ ++ALA F + A P + G + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG- 118
Y + G G F GY + G E + Y P D + G
Sbjct: 49 YENNDGPTHESQLGAGAFLGY---QANQYLGFE--LGYDWLGRMPNKGDVTNGAFKAQGI 103
Query: 119 SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLS 173
+ + Y ++D L +Y +G G I+ G + A VGVE ++
Sbjct: 104 QMAAKLSYPIADDLDVYTRLGGMVWRADATQTNPTFGRISNHDTGVSPLAAVGVEY-AVT 162
Query: 174 ESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
++ RL+Y+ V + L VG+ +
Sbjct: 163 KNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198
>gi|298369428|ref|ZP_06980746.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014
str. F0314]
gi|298283431|gb|EFI24918.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014
str. F0314]
Length = 361
Score = 43.1 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 12/157 (7%)
Query: 59 GLSALYNGSFGEEAHHNAGGSIFAGYNVED--SCIMY---GVEGDVRYTVPVLADNIHSL 113
G S ++ +A G + AG + +Y G + + + + +
Sbjct: 207 GASVKRGNRRNKDRDTSAAGQVGAGVQFNEWLGGEVYYQGGDKQEYDAPENLGNEKVEVR 266
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+ G R+ G +V+ ++A G + + + TAGVG V ++
Sbjct: 267 NDTYG-GRLTAGTKVAKKARVFAKAGVAGVRHKSKTAGAKDSDTKARATAGVGATVD-VN 324
Query: 174 ESLVARLEY-----RASKYSKVEGFYNTISLGVGMKF 205
++ R +Y R S + + +G KF
Sbjct: 325 DNWAVRADYDHYFKRNSDEDVKWKGADYLGVGAQYKF 361
>gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99]
gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 43.1 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 67/214 (31%), Gaps = 28/214 (13%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ ++ALA F + A P + G + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG---SL 120
Y + G G F GY + G E + + + L
Sbjct: 49 YQNNNGPTHESQLGAGAFLGY---QANQYLGFELGYDWLGRMPNKGSVTNGAFKAQGVQL 105
Query: 121 RIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLSES 175
+ Y ++D L +Y +G G I+ G + A VGVE L+++
Sbjct: 106 AAKLSYPIADDLDVYTRLGGMVWRADSTQTNPTYGRISNHDTGVSPLAAVGVEY-ALTKN 164
Query: 176 LVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
RL+Y+ V + L VG+ +
Sbjct: 165 WATRLDYQWVNNIGDAGTVGTRPDNSMLSVGVSY 198
>gi|149189798|ref|ZP_01868078.1| hypothetical protein VSAK1_12800 [Vibrio shilonii AK1]
gi|148836284|gb|EDL53241.1| hypothetical protein VSAK1_12800 [Vibrio shilonii AK1]
Length = 187
Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 20/166 (12%)
Query: 54 NGPYAGLSALY-----------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT 102
+G Y G + + + + AGY+ M+G E
Sbjct: 28 SGFYLGTYLGAMSAKNTDNVVNSKTETSVKSNFRSLGLKAGYDF---NSMFGAEMRHSRD 84
Query: 103 VPVLADNIHS-LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-KAGEITPIAIG 160
+ N +L + + VSDS+ LY G + + + G K +
Sbjct: 85 SGKIEKNSQGLAVDHQTALYGKVKFNVSDSIELYGLAGVNNIRLKQAGYKGNDNKKTINS 144
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-NTISLGVGMKF 205
+ GVG + + SL A LE K S + F ++I+LG+ KF
Sbjct: 145 FSYGVGAQYN-FTNSLGANLE--LMKLSNHKQFDAHSINLGLAYKF 187
>gi|297539083|ref|YP_003674852.1| OmpA domain-containing protein transmembrane region-containing
protein [Methylotenera sp. 301]
gi|297258430|gb|ADI30275.1| OmpA domain protein transmembrane region-containing protein
[Methylotenera sp. 301]
Length = 187
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 10/156 (6%)
Query: 54 NGPYAGLSALY-----NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
G YAG + N GE+ +A G I GY GVEG+ V
Sbjct: 27 EGFYAGGNVGVGKPNINTPNGEDKSSSAVGGIVLGYKF---NKYLGVEGEYTGIGKVTDK 83
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGV 167
+ G S+ G ++D LY +G + + A T G+G
Sbjct: 84 VSGTAKGDAASIAAIGFLPLNDEFNLYGKLGVAATKTKVSSSLAPMNDDTRTSVTYGLGG 143
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
E +++++ RL + + + + + G +
Sbjct: 144 EYN-VNKNIGIRLGWDHYSAAVKDVTNSKDNFGANV 178
>gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 335
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIRGG---YEV 128
+ GG +FAGYNV + + YT A+ N + G +
Sbjct: 53 RDDMGGGLFAGYNVTPWFAV-----ETGYTWLGRAEFNNDYKMRVDQQAIDLVGKFTWHA 107
Query: 129 SDSLLLYATVGPDVAQKYETGKAGE--ITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
+D + LYA +G G E +G TAG G+E L + L ARLEY+
Sbjct: 108 TDYMGLYAKLGGAYYFSEAKGFGAEKYKDDGVVG-TAGAGLEF-FLDDHLSARLEYQY-- 163
Query: 187 YSKVEGFYNTIS 198
Y VE +
Sbjct: 164 YHDVELKDKDVR 175
>gi|115522859|ref|YP_779770.1| porin [Rhodopseudomonas palustris BisA53]
gi|115516806|gb|ABJ04790.1| porin [Rhodopseudomonas palustris BisA53]
Length = 275
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 65/238 (27%), Gaps = 74/238 (31%)
Query: 8 VGVSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN------------ 54
+ + ++AL + SA AAD V +++
Sbjct: 4 ILLGAVALTALCSSAVAADLPVYTK-----------APVVVAPVFNWSGFYVGGFVGGAV 52
Query: 55 --------------GPYAGLSALYNGSFGEEA---HHNAGGSIFAGYNVE--DSCIMYGV 95
YN + + + G G N + S ++GV
Sbjct: 53 ADGNANSTEPRGAAPAAPFAPVFYNATAFDNNYSLSNTFIGGGTIGLNYQPSASNWLFGV 112
Query: 96 EGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139
EG+V Y + + + + G R GY D +L YA G
Sbjct: 113 EGEVGYLKLSRSVVDINPVPAGAPGADSIDRTRIGDLYGVFAARLGYAF-DRVLFYAKGG 171
Query: 140 PDVAQKY-------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
K + + + AG G+E +++S + EY
Sbjct: 172 AAFVGKEASFTDKCAVAPCSVNTLNTDYSGTQLTWAAGGGLEY-AINDSWSVKGEYLY 228
>gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163]
Length = 355
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 70/216 (32%), Gaps = 32/216 (14%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ ++ALA F + A P + G + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG- 118
Y + G G F GY + G E + Y P D + G
Sbjct: 49 YENNDGPTHESQLGAGAFLGY---QANQYLGFE--LGYDWLGRMPNKGDVTNGAFKAQGI 103
Query: 119 SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLS 173
+ + Y ++D L +Y +G G I+ G + A VGVE ++
Sbjct: 104 QMAAKLSYPIADDLDVYTRLGGMVWRADATQTNPTFGRISNHDTGVSPLAAVGVEY-AVT 162
Query: 174 ESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
++ RL+Y+ V + L VG+ +
Sbjct: 163 KNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198
>gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 317
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 13/158 (8%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH-NAGGSIFAGYNVEDSCIMYGVEGDV 99
A + G G + G N G F GY + + VE
Sbjct: 10 SAAANAATDNPFYAGARIGNAIYDTDHKGPNVDDANLAGGAFLGYQIAP---WFAVEAGY 66
Query: 100 RYTVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158
+ + G+ + + Y ++D + ++ +G + A
Sbjct: 67 THLGSTTIKGTDAKFRTQGADIVGKYSYAINDKIDVFGKLGAYYYDVHTKNLADAKE--- 123
Query: 159 IGG--TAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
G TAGVG E L+ +L +EY+ Y+ V G
Sbjct: 124 HGWAGTAGVGAEYY-LTNNLSTAVEYQY--YNDVAGAD 158
>gi|119776560|ref|YP_929300.1| outer membrane protein [Shewanella amazonensis SB2B]
gi|119769060|gb|ABM01631.1| outer membrane protein, putative [Shewanella amazonensis SB2B]
Length = 181
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 10/135 (7%)
Query: 55 GPYAGL---SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
G YAG + + G G + GYN DS +G+E V T +
Sbjct: 26 GFYAGGYVSNTNLDDKIGPFDESAWGLGAYGGYNFNDS---FGLETSVFGTDSFIDGVDL 82
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+ G+ + +R + SD++ +Y G V Q + + + G G GV++
Sbjct: 83 QVVGLTFAPTVR--HAFSDTVTVYLKGGV-VYQVIASDDSLDDDYQGTGYLLGAGVDIS- 138
Query: 172 LSESLVARLEYRASK 186
S +L R+ Y S+
Sbjct: 139 FSSNLAMRVFYEFSE 153
>gi|254696122|ref|ZP_05157950.1| porin [Brucella abortus bv. 2 str. 86/8/59]
gi|254705299|ref|ZP_05167127.1| porin [Brucella suis bv. 3 str. 686]
gi|260760487|ref|ZP_05872833.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260670922|gb|EEX57743.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
Length = 71
Score = 42.7 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 10/76 (13%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51
Query: 63 LYNGSFGEEAHHNAGG 78
Y + + GG
Sbjct: 52 GYGWGRAKLENRTNGG 67
>gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 351
Score = 42.7 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 62/190 (32%), Gaps = 34/190 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHN---------AGGSIFAGYNVEDSCI 91
+ P + Y G ++ + +H GG F GY +
Sbjct: 16 ATVAQAAPKDDTW---YVGGKLGWSHYYDNSINHFGSTNVRPDQFGGGAFFGY---QANP 69
Query: 92 MYGVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG---PDVAQ 144
G E + Y DN + G L + Y ++D L +Y +G
Sbjct: 70 YLGFE--MGYDWLGRMEYRGDNNGAFKSQGVQLAAKLSYPIADDLDIYTRLGGMVWRADG 127
Query: 145 KYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGF----YNT 196
+ G + + A +GVE L++ RL+Y+ S NT
Sbjct: 128 SANSATKGRYIDSNDTGVSPLAAIGVEY-ALNKDWATRLDYQFVSNIGDANETAARPDNT 186
Query: 197 -ISLGVGMKF 205
+S+GV +F
Sbjct: 187 LLSVGVTYRF 196
>gi|84386141|ref|ZP_00989170.1| hypothetical protein V12B01_18146 [Vibrio splendidus 12B01]
gi|84378911|gb|EAP95765.1| hypothetical protein V12B01_18146 [Vibrio splendidus 12B01]
Length = 189
Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 36/113 (31%), Gaps = 7/113 (6%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYE 127
G G +++ GY + GVE + Y L SL GY
Sbjct: 48 GSLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKKGTAKLSPTSVSLSANLGYT 102
Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
+++ + G AG G GVGVE + E L RL
Sbjct: 103 FDNTIRPFVLAGLSSVDLNANKSAGYADDSGTGFHFGVGVEYTPI-EHLTLRL 154
>gi|295097419|emb|CBK86509.1| Opacity protein and related surface antigens [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 203
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 28/174 (16%)
Query: 57 YAGLSALYNGSFG----------------EEAHHNAGGSIFAGYNVEDSCIMYGVE---G 97
Y+G ++ F + H N GG ++ GY + + G G
Sbjct: 29 YSGAKFGWSHYFDTNMGSKAFENTYSDHFDFNHDNVGGGVYTGYQITPWLAVEGGYDYLG 88
Query: 98 DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
+++ A G+ SL+ Y +S +Y G +
Sbjct: 89 NMQIKGQHGAGAQMKTQGLQMSLKA--SYALSSDWDIYGRAGAMGYRAESDVSGHNRFET 146
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205
+ A VG E +++ RLEY+ S V ++++ G+ +F
Sbjct: 147 GVRPLAAVGTEY-AFNKNWAGRLEYQWVSNVGNVNQIGVSSDLSSVTAGLSYRF 199
>gi|296104524|ref|YP_003614670.1| putative outer membrane protein A [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058983|gb|ADF63721.1| putative outer membrane protein A [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 204
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 29/175 (16%)
Query: 57 YAGLSALYNGSFGEEA-----------------HHNAGGSIFAGYNVEDSCIMYGVE--- 96
Y+G ++ F H N GG ++AGY + + G
Sbjct: 29 YSGAKFGWSHYFDANTGSKASDNNNGSNQYNIDHDNVGGGVYAGYQMTPWLALEGGYDYL 88
Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156
G+++ A G+ SL+ Y V+DS +Y G +
Sbjct: 89 GNMQIKGKHSAGAQMKSQGLQMSLKA--SYAVTDSWDIYGRAGAMAYRAESDVSGHNRFE 146
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205
+ A VG E +++L RLEY+ S V ++++ G+ +F
Sbjct: 147 TGVRPLAAVGTEY-AFNKNLAGRLEYQWVSNVGNANQIGVSSDVSSVTAGLTWRF 200
>gi|89074664|ref|ZP_01161129.1| outer membrane protein, putative [Photobacterium sp. SKA34]
gi|89049602|gb|EAR55162.1| outer membrane protein, putative [Photobacterium sp. SKA34]
Length = 189
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 24/170 (14%)
Query: 41 IATNRYVPIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMY 93
+ T D GPY G S + + ++ GYN ++
Sbjct: 11 VLTTASGAALADQTGPYIGASVGNATTDLKADHWEYNYDENVLAYGVYGGYNFTEN---L 67
Query: 94 GVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153
G+E + T + + G +L R ++D L L+A G
Sbjct: 68 GLEATLGQT----GEQDNIKKGY-ATLTPRLMMPINDQLSLFAKAGVAYVAVDGDYDGAG 122
Query: 154 I------TPIAIGGTAGVGVEVGGLSESLVAR--LEYRASKYSKVEGFYN 195
G TAG GV ++E + R ++Y ++ K + +
Sbjct: 123 DINRHDIDVDGFGWTAGAGVNF-AVAEHVDLRAGIDYLSTDLEKADNDKD 171
>gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179]
gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179]
Length = 361
Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 29/225 (12%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ +S LA AQAA + + + V + G A
Sbjct: 1 MKKTAIALAIS--GLAFVSVAQAA--PQANTFYAGAKAGWASFHNDVKQLDNIYGQDAYS 56
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL---ADNI---HSLH 114
S + FG + G +F GY + D+ + VE + + DN+ H+ H
Sbjct: 57 SLEQDEKFGVHRNSVTYG-VFGGYQITDN---FAVEAGYDFYGQLKAHQGDNVRFRHTAH 112
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-----YETGKAGEITPIAIGGTAGVGVEV 169
G+ SL+ D L +Y +G + + K + + GVE
Sbjct: 113 GLNLSLKASYPVAYVDGLDVYGRLGAALIRSDYAVHTNGEKTLSEHKLKVSPVFAAGVEY 172
Query: 170 GGLSESLVARLEYRA-SKYSKVEGFYN--------TISLGVGMKF 205
L E L ARLEY+ +K KV+ F + ++SLG+ +F
Sbjct: 173 AILPE-LAARLEYQWIAKVGKVDQFEDISYSPSIGSVSLGLSYRF 216
>gi|189467894|ref|ZP_03016679.1| hypothetical protein BACINT_04286 [Bacteroides intestinalis DSM
17393]
gi|189436158|gb|EDV05143.1| hypothetical protein BACINT_04286 [Bacteroides intestinalis DSM
17393]
Length = 1119
Score = 42.3 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 19/100 (19%)
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKAGEITPI-- 157
V +N G +L++R GY V+ + + Y T G V+Q
Sbjct: 681 AWKVNEENFLQAIGWINTLKVRVGYGVTGNASVSPYQTGGAMVSQWANKPFGQGAVTTNT 740
Query: 158 -----------AIGG--TAG--VGVEVGGLSESLVARLEY 182
+G TA VG++ G L+ + EY
Sbjct: 741 TGAKASVLPNKMLGWEKTASTNVGIDFGFLNNRITGSAEY 780
>gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z]
gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein
[Actinobacillus succinogenes 130Z]
Length = 356
Score = 41.9 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 41/189 (21%)
Query: 56 PYAGLSALYNG-------------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT 102
YAG ++ + G ++ +F GY + + +G+ ++ Y
Sbjct: 28 FYAGARVGWSAMHHGVDRIADQFVTDGGLNRNSVTYGVFGGYQILNQNN-FGLAAELGYD 86
Query: 103 --VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-------YETGKAGE 153
AD G SL ++ YE+ L +Y VG + + +G A +
Sbjct: 87 FFGKTKADAAGYHAAHGASLALKPSYEIYPDLDVYGKVGVALVRNMYKAETLSASGDAEK 146
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFY----------------NT 196
G GVE L E L ARLEY+ SK ++ ++
Sbjct: 147 FNKTKASLILGAGVEYAILPE-LAARLEYQWLSKAGNLDSALEDAGYNGTNARYSPDIHS 205
Query: 197 ISLGVGMKF 205
++ G+ +F
Sbjct: 206 VTAGLSYRF 214
>gi|52425275|ref|YP_088412.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307327|gb|AAU37827.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 273
Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 24/182 (13%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYGVE------GD 98
Y R + + G+ A +N ++ +F GY + + VE G
Sbjct: 29 YAGARAGWASFHDGVDAFHNSDGLSAKKNSVTYGVFGGYQILNQNNFGLAVELGYDDYGR 88
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV--AQKYETGKAGEITP 156
+R + HG+ S++ YEV D L +YA VG + +
Sbjct: 89 IRLIETDAKRGKFTNHGVNLSIKP--SYEVLDGLDVYARVGAALIRTDYKDYSIDAAGHS 146
Query: 157 IAIGGTAGVGVEVGG-LSESLVARLEY----------RASKYSKVEGFYN--TISLGVGM 203
+ + T G+E + L RLEY + S Y+ + + ++ G+
Sbjct: 147 LKVSPTFAAGLEYALPILPELAMRLEYQWIENVGRDQKWSGYNDADFTPDIGAVTFGLSY 206
Query: 204 KF 205
+F
Sbjct: 207 RF 208
>gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 356
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 58/193 (30%), Gaps = 24/193 (12%)
Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS------FGEEAHHNAGG-SIFAGY 84
+ G V + P Y G A + N G FAGY
Sbjct: 19 YQSLGSVYAAEADSSEPANEFAPYFYLGAKAGQMHYQNACESWSVSCDGNYVGFGGFAGY 78
Query: 85 N-VEDSCIMYG----VEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138
+ E Y+ V + S+ G S R G +S+ L+A
Sbjct: 79 QAWQYLGFETAYLDLGEAVSGYSESAVNNTYVGSMKGWELSAVTRFG--LSEDFELFAKA 136
Query: 139 GPDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLSESLVARLEYRASKYSKVEGF--- 193
G G + G G G+ +S S VARLEY+ +
Sbjct: 137 GSFYWDGDNQGPYSRNSDS--GWAPMLGAGL-AYQISPSWVARLEYQYIDKLGSDLIGGS 193
Query: 194 -YNTISLGVGMKF 205
+ +LG+ +F
Sbjct: 194 NGHLTTLGISYRF 206
>gi|114776382|ref|ZP_01451427.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1]
gi|114553212|gb|EAU55610.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1]
Length = 251
Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 61/189 (32%), Gaps = 39/189 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M K F +SL LA C+AQA++ PY GL
Sbjct: 65 MTKTFKIAAATSLLLACACTAQASE------------------------------PYVGL 94
Query: 61 SAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI---HSLHGI 116
+N G AGG + G + + G E + T +
Sbjct: 95 GVGAFNLGSGVTKKAVAGGYLQLGDDFSE---YLGGEVRIGTTGKSGEELTLQPRMKIEY 151
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIAIGGTAGVGVEVGGLSES 175
G+ ++ Y+ +D + YA +G + Y G G+GV+ L++
Sbjct: 152 FGAAYLKPKYQFNDQWMGYALLGIATLRSSYSETGLAVQKKTRTGYAYGLGVQYR-LADE 210
Query: 176 LVARLEYRA 184
LEY
Sbjct: 211 YSIGLEYSH 219
>gi|160873391|ref|YP_001552707.1| OmpA domain-containing protein [Shewanella baltica OS195]
gi|160858913|gb|ABX47447.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS195]
Length = 186
Score = 41.9 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 17/175 (9%)
Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
V D G Y G + + + G ++ GYN +G+E ++
Sbjct: 17 AATQVSAATDTTGFYVGGALNRVTADAFDGSETGTGVGVYGGYNF---NEWFGLEANLFA 73
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161
T + ++ G S + +++D YA VG G + G
Sbjct: 74 TGDLGDKDVDISAG-ALSFTPKFTAQINDIFSAYAKVGIASMAVNVDGYGYDEDFTGFGW 132
Query: 162 TAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205
T GVGV ++E L R+ Y ++ ++GV +F
Sbjct: 133 TYGVGVNA-AVTEHLNIRVSYDVTTGDLDADRSYLGLKDIDTDIKQFAVGVHYQF 186
>gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3]
gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3]
Length = 364
Score = 41.9 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 73/223 (32%), Gaps = 39/223 (17%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
QK+ ++ALA F + A P + G + ++ G Y
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLG---------WSQYHDTGFY---G 54
Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLH 114
+ + G + G F GY V G E + Y + +
Sbjct: 55 NGFQNNNGPTRNDQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMAYKGSVDNGAFKAQ 109
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDV------AQKYETGKAGEITPIAIGGTAGVGVE 168
G+ L + GY ++D L +Y +G V TG + + GVE
Sbjct: 110 GVQ--LTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVE 167
Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
++ + RLEY+ V + +SLGV +F
Sbjct: 168 -WAVTRDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF 209
>gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 364
Score = 41.9 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 73/223 (32%), Gaps = 39/223 (17%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
QK+ ++ALA F + A P + G + ++ G Y
Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLG---------WSQYHDTGFY---G 54
Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLH 114
+ + G + G F GY V G E + Y + +
Sbjct: 55 NGFQNNNGPTRNDQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMAYKGSVDNGAFKAQ 109
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDV------AQKYETGKAGEITPIAIGGTAGVGVE 168
G+ L + GY ++D L +Y +G V TG + + GVE
Sbjct: 110 GVQ--LTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVE 167
Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
++ + RLEY+ V + +SLGV +F
Sbjct: 168 -WAVTRDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF 209
>gi|145297581|ref|YP_001140422.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850353|gb|ABO88674.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 343
Score = 41.9 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 24/160 (15%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105
Y + ++ Y G+ + +E + G FAGY + + G+E Y
Sbjct: 28 YGGAKLGWSNFY-GVDENNITTLLDEDNDEVGAGAFAGYQINQN---LGIELGYDYLGNY 83
Query: 106 LADNIHSLHGIGGSLRI-------RGGYEVSDSL----LLYATVGPDVAQKYETGKAGEI 154
S + + G+ V+++L L G + K +
Sbjct: 84 KYSGTRSGAAFNDKVEAQLAQLTLKLGFPVAENLDLYGRLGGGYGWASSDKLDNDG---- 139
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASK-YSKVEGF 193
+G E + ARLEY+ S Y E
Sbjct: 140 ---RFNFVGALGAEYAFNLD-WAARLEYQYSSPYGDREDT 175
>gi|29654891|ref|NP_820583.1| opacity family porin protein [Coxiella burnetii RSA 493]
gi|161830942|ref|YP_001597432.1| opacity family porin protein [Coxiella burnetii RSA 331]
gi|165924228|ref|ZP_02220060.1| opacity family porin protein [Coxiella burnetii RSA 334]
gi|212212051|ref|YP_002302987.1| heat resistant agglutinin [Coxiella burnetii CbuG_Q212]
gi|81628627|sp|Q83BB2|Y1600_COXBU RecName: Full=Uncharacterized protein CBU_1600; Flags: Precursor
gi|29542160|gb|AAO91097.1| heat resistant agglutinin [Coxiella burnetii RSA 493]
gi|161762809|gb|ABX78451.1| opacity family porin protein [Coxiella burnetii RSA 331]
gi|165916327|gb|EDR34931.1| opacity family porin protein [Coxiella burnetii RSA 334]
gi|212010461|gb|ACJ17842.1| heat resistant agglutinin [Coxiella burnetii CbuG_Q212]
Length = 181
Score = 41.9 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 16/177 (9%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96
+P I V +GPY GL G + + GY + + I E
Sbjct: 13 AIPPIYAGGAVDTPFLNSGPYVGLHGGVALPSGSDLNAGPVVGAQVGYRMGNVRI----E 68
Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYE--VSDSLLLYATVG------PDVAQKYET 148
G + Y L N + + +L G Y+ + L+ + VG
Sbjct: 69 GALSYYSNSLEANSDAKLRMT-TLMANGYYDFNFNAPLVPFVGVGVGWVHAWRTNNGVLL 127
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ + A G AGV +S + ++YR ++ G N I + V +F
Sbjct: 128 NRGPDNNEFAYQGIAGV---SFRVSPRVTLGVDYRYLGWTDGNGSQNLIEMSVNYQF 181
>gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
Length = 357
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 54/188 (28%), Gaps = 39/188 (20%)
Query: 48 PIRHDFNGPYAGLSALYNGS--------------FGEEAHHNAGGSIFAGYNVEDSCIMY 93
P + + Y G ++ G +AGY
Sbjct: 23 PKDNTW---YTGAKLGWSHYEDTSFTPVDRENTVGKSTDRDTFGAGAYAGYQYNQ---YM 76
Query: 94 GVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
G E + Y + G SL + Y V D L +Y +G V +
Sbjct: 77 GFE--LGYDWFGKMKYKGAGNNGDLKSMGVSLTTKLSYPVMDDLDVYTRLGGMVWRTDVK 134
Query: 149 G-----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA------SKYSKVEGFYNTI 197
+ + +GVE ++ + RL+Y+ + V +
Sbjct: 135 AHQTGEDRYKENDTGVSPVYALGVEY-AITPNWATRLDYQWVSNIGDNDNLGVRPDNGML 193
Query: 198 SLGVGMKF 205
S+G+ +F
Sbjct: 194 SVGLAYRF 201
>gi|304411789|ref|ZP_07393401.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|307306159|ref|ZP_07585904.1| OmpA domain-containing protein [Shewanella baltica BA175]
gi|304349977|gb|EFM14383.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|306911032|gb|EFN41459.1| OmpA domain-containing protein [Shewanella baltica BA175]
Length = 186
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 21/177 (11%)
Query: 43 TNRYVPIRHDFNGPYAGLS---ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
V D G Y G + + G E G +N +G+E ++
Sbjct: 17 AATQVSAATDTTGFYVGGALNRVTADTFGGSETGTGVGVYGGYNFNEW-----FGLEANL 71
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
T + ++ G S + +++D YA VG G +
Sbjct: 72 FATGDLGDKDVDISAG-ALSFTPKFTAQINDIFSAYAKVGIASMAVNVDGYGYDEDFTGF 130
Query: 160 GGTAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205
G T GVGV ++E L R+ Y ++ ++GV +F
Sbjct: 131 GWTYGVGVNA-AITEHLNIRVSYDVTTGDLDADRSYLGLKDIDTDIKQFAVGVHYQF 186
>gi|218675816|ref|YP_002394635.1| Outer membrane protein [Vibrio splendidus LGP32]
gi|218324084|emb|CAV25231.1| Outer membrane protein [Vibrio splendidus LGP32]
Length = 196
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 12/132 (9%)
Query: 55 GPYAGLSALYNGSFGEEAH-----HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLAD 108
G Y G + H G +++ GY + GVE + Y +
Sbjct: 33 GAYVGGGLSVYQDSDTDGHGNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKN 87
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
L S GY +++ + G + A G GVGVE
Sbjct: 88 GAEKLSPTSISASANIGYTFDNTIRPFVLAGLSSVDLHANQAANYGDDSGTGFHFGVGVE 147
Query: 169 VGGLSESLVARL 180
+ E L RL
Sbjct: 148 YTPI-EHLTLRL 158
>gi|86144751|ref|ZP_01063083.1| hypothetical protein MED222_10078 [Vibrio sp. MED222]
gi|85837650|gb|EAQ55762.1| hypothetical protein MED222_10078 [Vibrio sp. MED222]
Length = 196
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 12/132 (9%)
Query: 55 GPYAGLSALYNGSFGEEAH-----HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLAD 108
G Y G + H G +++ GY + GVE + Y +
Sbjct: 33 GAYVGGGLSVYQDSDTDGHGNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKN 87
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
L S GY +++ + G + A G GVGVE
Sbjct: 88 GAEKLSPTSISASANIGYTFDNTIRPFVLAGLSSVDLHANQAANYGDDSGTGFHFGVGVE 147
Query: 169 VGGLSESLVARL 180
+ E L RL
Sbjct: 148 YTPI-EHLTLRL 158
>gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1]
gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1]
Length = 338
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 52/177 (29%), Gaps = 33/177 (18%)
Query: 47 VPIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
+P+ D +G Y G N S ++ GY+ D + +
Sbjct: 17 LPVVAD-DGFYLGGRLGGSQLSDACNVSAAPCTDSGFSAGVYTGYDWNDY-----IALEF 70
Query: 100 RYTV-----PVLADNIHSLHGIGGS---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151
Y D S L + Y +D ++ VG
Sbjct: 71 AYDWLGSYETSFVDGAEYRRDANLSALTLAPKFSYPFNDEWAIFGKVGAAYTM-----YD 125
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSK--VEGFYNTISLGVGMKF 205
+ +G GVG+E + + RLEY R + +T LG+ F
Sbjct: 126 DRKSTALMG---GVGLEYDFAT-AWSGRLEYQRINDAKDDWFNTDVDTFWLGISYSF 178
>gi|315265620|gb|ADT92473.1| OmpA domain-containing protein [Shewanella baltica OS678]
Length = 185
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 17/175 (9%)
Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
V D G Y G + + + G ++ GYN +G+E ++
Sbjct: 16 AATQVSAATDTTGFYVGGALNRVTADAFDGSETGTGVGVYGGYNF---NEWFGLEANLFA 72
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161
T + ++ G S + +++D YA VG G + G
Sbjct: 73 TGDLGDKDVDISAG-ALSFTPKFTAQINDIFSAYAKVGIASMAVNVDGYGYDEDFTGFGW 131
Query: 162 TAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205
T GVGV ++E L R+ Y ++ ++GV +F
Sbjct: 132 TYGVGVNA-AVTEHLNIRVSYDVTTGDLDADRSYLGLKDIDTDIKQFAVGVHYQF 185
>gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591]
gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein
[Dickeya zeae Ech1591]
Length = 355
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHN-----------AGGSIFAGYNVEDS 89
+ P + + YAG ++ + N G F GY +
Sbjct: 16 ATVAQAAPNDNTW---YAGGKLGWSQYHDSGLNGNGYNVTNAAQNQLGAGAFGGY---QA 69
Query: 90 CIMYGVEGDVRYTVP---VLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y G L + Y + D + +Y +G V +
Sbjct: 70 NPYLGFE--MGYDWLGRMKYNGGNQGSFKAQGIQLAAKLSYPIVDDVDVYTRLGGFVWRA 127
Query: 146 YETGKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--IS 198
+G + A VGVE ++++ RL+Y+ S V G + +S
Sbjct: 128 DSHDNSGLNDHDTGVSPLAAVGVEY-AITKNWATRLDYQWVNNIGDASTVGGRPDNGLLS 186
Query: 199 LGVGMKF 205
+GV +F
Sbjct: 187 VGVSYRF 193
>gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976]
gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976]
Length = 383
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 26/199 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ VS LALA AQAA P + + G V + + ++ + Y
Sbjct: 1 MKKTVIALAVSGLALA--SVAQAA-PQQNTFYAGAKVGQSSFHHGVNQLKFGHDDRYNDE 57
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYGVEGDVRYTVPVLADN------IHSL 113
+ Y + + +F GY + + E Y V + HS
Sbjct: 58 TRTYGINRNSVTY-----GVFGGYQILNQNNFGLAAELGYDYYGRVRGNKGEFRSFKHSA 112
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGV 165
HG+ +L+ YEV +L +Y VG V + + + G
Sbjct: 113 HGLNFALKP--SYEVLPNLDVYGKVGVAVVRNDYKFYSAENTNEPTEKFHKLKASTILGA 170
Query: 166 GVEVGGLSESLVARLEYRA 184
GVE L E L AR+EY+
Sbjct: 171 GVEYVILPE-LAARVEYQY 188
>gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 346
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 6/144 (4%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105
Y + + + GL +G+ G+ ++ IF GY + D+ +
Sbjct: 29 YAGAKAGWASVHHGLGQFTDGNDGKIRRNSEAYGIFGGYQITDNLAVEAGYEYFGRAKVK 88
Query: 106 LADNIHSLHGIGGSLRIRGG-YEVSDSLLLYATVGPDVAQK----YETGKAGEITPIAIG 160
+D H G+ G Y V D+L +Y G + + G A + + +
Sbjct: 89 YSDGDQFRHTAHGTTLALKGSYPVLDNLDVYGRAGAALIRSDYKQVNDGVADKYHNLKVS 148
Query: 161 GTAGVGVEVGGLSESLVARLEYRA 184
GVE L E L R EY+
Sbjct: 149 PVFAAGVEYAILPE-LALRAEYQW 171
>gi|332534599|ref|ZP_08410432.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035949|gb|EGI72429.1| putative TonB-dependent receptor protein with OmpA-like
transmembrane domain [Pseudoalteromonas haloplanktis
ANT/505]
Length = 189
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 98 DVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDV--AQKYETGKAGEI 154
++ Y +I S I G SL R GY +++S +YA G A + G +
Sbjct: 77 ELAYQNFDEVSDIDSKAEIDGVSLAARLGYPITESFSVYAKGGWLEWDADYTQDLPVGGV 136
Query: 155 TPIAIGGTA--GVGVEVGGLSESLVARLEY-RA 184
T GG A G G+E L+ ++ RLEY R
Sbjct: 137 TASTDGGDAFYGAGIEY-ALTTNVQFRLEYERY 168
>gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3]
gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3]
Length = 318
Score = 41.6 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 54/172 (31%), Gaps = 30/172 (17%)
Query: 56 PYAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEG--------DVR 100
Y G N + + G +AGY + +E D
Sbjct: 23 AYVGAKLSVNHYQNACQSWAIDCDATDIAGGFYAGYQF---NKYFALEAAYLNLGKVDAI 79
Query: 101 YTVPVLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
Y + N GI S Y +S+ +A G Q G +
Sbjct: 80 YPINEAEKNFTGSMQGIEISALAL--YPLSNDFNAFAKAGVFNWQAKSEGGPLTQKDYGL 137
Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------NTISLGVGMKF 205
T G+G+ +S+ ARLEY+ ++ + + SLG+ +F
Sbjct: 138 SPTIGLGLSYQ-ISKQWQARLEYQY--FANIGSAEIGGANAHLSSLGISYQF 186
>gi|170744188|ref|YP_001772843.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46]
gi|168198462|gb|ACA20409.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46]
Length = 209
Score = 41.6 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 16/189 (8%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHD-FNGPYAGLSALYNG 66
V L A A G G +P+ A R ++G YA LS +
Sbjct: 13 VAACLLLGGFLLRADLAAAQGVPPFAGFGALPSFAWPRPAGDEETRWSGSYAALSTGFAA 72
Query: 67 SFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRY------TVPVLADNIHSLHGIGG 118
+ +AG ++ G ++ ++YGV G + + + G
Sbjct: 73 VSSKHFGSSAGPTVGFEGGRMWQEGRLVYGVSGGFDFLSALGGGAAPGFGGLAYSRDLAG 132
Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI------AIGGTAGVGVEVGGL 172
L ++ G ++ +L+YA G + ++ A+ A VGVE +
Sbjct: 133 GLEVKVGALLTPDVLVYAKAGAVAVHETLRVGPTAVSRSFAREDLAVRPEARVGVE-WAV 191
Query: 173 SESLVARLE 181
++ L +E
Sbjct: 192 TDRLSVAVE 200
>gi|254249287|ref|ZP_04942607.1| Opacity protein [Burkholderia cenocepacia PC184]
gi|124875788|gb|EAY65778.1| Opacity protein [Burkholderia cenocepacia PC184]
Length = 254
Score = 41.6 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 17/145 (11%)
Query: 68 FGEEAHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
G + N GS+ GY + ++ + N + H + +
Sbjct: 84 GGPDTGSNVTGSLGLGYQFGNGWRAEGEYVFKRTNNFTSYWAPFDANANEFH-VSAQRLM 142
Query: 123 RGGY---EVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGL 172
GY ++ +Y T+G VA Q +T + T + +AG GV +
Sbjct: 143 LNGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRRFASKTQTNLAYSAGAGVSY-AI 201
Query: 173 SESLVARLEYRASKYSKVEGFYNTI 197
++ L YR VE +NT
Sbjct: 202 NKRFSIDLGYRYVDMGNVETGFNTF 226
>gi|332663467|ref|YP_004446255.1| hypothetical protein Halhy_1489 [Haliscomenobacter hydrossis DSM
1100]
gi|332332281|gb|AEE49382.1| hypothetical protein Halhy_1489 [Haliscomenobacter hydrossis DSM
1100]
Length = 165
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-IGGSLRIRGGYEVSDSLLLYAT 137
+FA + +G+ Y P N+ + +L + +D L +Y
Sbjct: 40 GLFARGEFQIPNKDFGIVASANYYFPKEDKNLGVSQNRMALNLDGMYTFAGNDFLDIYGL 99
Query: 138 VGPDV--AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G +V A +G + + G G G+ L +L+ E R V G +
Sbjct: 100 GGLNVLLASTKISGFDEKTSSTKFGFGVGGGIRY-KLESNLIPMAEMRY-----VNGGQD 153
Query: 196 TISLGVGMKF 205
+ +G+ F
Sbjct: 154 EFVINIGLLF 163
>gi|296284988|ref|ZP_06862986.1| putative outer membrane protein [Citromicrobium bathyomarinum
JL354]
Length = 206
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG 115
Y G+ +G+ + I AGY++ + GVEG+ +
Sbjct: 43 GYEGVEVESSGNTVTADADSVVYGIAAGYDLSLGGVFVGVEGEYSASGSSTEFPDSFAGA 102
Query: 116 IGG-------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT---PIAIGGTAGV 165
G L R G ++ ++ Y VG AG A G G
Sbjct: 103 RDGLESDGQYYLGARAGVPITGAISAYGKVGYTALDTRSFTTAGSFADVEENATGFRFGG 162
Query: 166 GVEVGGLSESLVARLEYRASKY-----SKVEGFYNTISLGVGMKF 205
GV++ L L AR+EYR S+Y + N + GVG++F
Sbjct: 163 GVQLD-LPGPLEARMEYRRSRYGDVGGDVGDVTTNQVVAGVGLRF 206
>gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 368
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 63/217 (29%), Gaps = 64/217 (29%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M K LAV VS L ++ A A D + + YAG
Sbjct: 1 MNKSILAVLVSGLLVSGAVQAAAQD-------------------------NTW---YAGG 32
Query: 61 SALYNGSF-----------------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103
A ++ F + G FAGY + + G E +
Sbjct: 33 KAGWSKFFDVDQKQVVSDTLGALQNTSTSKDTLGLGAFAGYQLNPN---LGFEFGYDWFG 89
Query: 104 PVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYA--TVGPDVAQKYETGKAGEI 154
+ S + G + + G+ V+D+L LY G + +
Sbjct: 90 KYTSSGELSGVRVEGEAKSQMIQTTMKIGFPVNDALDLYGRIGGGYAWTNSELSAQTATD 149
Query: 155 TPIAIGGTAGV------GVEVGGLSESLVARLEYRAS 185
G G G E + ARLEY+ +
Sbjct: 150 FIKDTGNKHGAVFVGALGAEY-AIDRDWAARLEYQYT 185
>gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 368
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 47/203 (23%)
Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEE-----------------AHHNAGGSIFAGYN 85
+ + + YAG A ++ F + + G FAGY
Sbjct: 18 AVQAAAQDNTW---YAGGKAGWSKYFDVDQKQVVSDTLGALQNTGTSKDALGLGAFAGYQ 74
Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYA-- 136
+ + G E + + S + G + + G+ V+D+L LY
Sbjct: 75 LNPN---LGFEFGYDWLGKYTSSGELSGVRVEGEAKSQMIQATMKIGFPVNDALDLYGRI 131
Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGV------GVEVGGLSESLVARLEYRAS----- 185
G + + G G G E + ARLEY+ +
Sbjct: 132 GGGYAWTDSELSARTATDFIKETGDKHGAVFVGALGAEY-AIDRDWAARLEYQYTTPLGD 190
Query: 186 ---KYSKVEGFYNTISLGVGMKF 205
S +E +S+G+ +F
Sbjct: 191 ASLDRSGIEMDNGLLSVGMLYRF 213
>gi|78186190|ref|YP_374233.1| outer surface protein, putative [Chlorobium luteolum DSM 273]
gi|78166092|gb|ABB23190.1| outer surface protein, putative [Chlorobium luteolum DSM 273]
Length = 195
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 14/138 (10%)
Query: 56 PYAGLSALY------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLA 107
PYA S + F + +N G ++ + Y +EG++ Y +
Sbjct: 34 PYATGSVGLAMLQDSDVEFAADRSYNTGYTLTGAVGLRSGE--YRLEGELGYQENGIESS 91
Query: 108 DNIHSLHGIGGSLRIRGGYEV-SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
+ S+ G+ +E+ S S Y T G +A ++ G + G G
Sbjct: 92 GDDVSILSFLGN--GYIDFEMASSSFTPYLTAGFGLASVDDSSGPGSVDDTVFAWQLGAG 149
Query: 167 VEVGGLSESLVARLEYRA 184
V +++++ + YR
Sbjct: 150 VGYR-FADNMLVDVRYRY 166
>gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 356
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 57/191 (29%), Gaps = 20/191 (10%)
Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------EEAHHNAGGSIFAGY 84
+ G V T+ Y G A ++ G F GY
Sbjct: 19 YLSLGAVYAAETDNSEAANEFDPYFYLGAKAGQMHYQNACESWSISCDGNDVGFGGFVGY 78
Query: 85 N-VEDSCIMYG----VEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138
+ E Y+ V S+ G S R + +S+S L+A
Sbjct: 79 QAWQYLGFETAYLDLGEAVAHYSESGVNNTYTGSMKGWEISAVTR--FSLSESFELFAKA 136
Query: 139 GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----Y 194
G G + G GVE LS S VARLEY+ +
Sbjct: 137 GSVYWDGDNRGPQSRNSDSDWAPMLGAGVEYQ-LSPSWVARLEYQYIDSLGSDLIGGSNG 195
Query: 195 NTISLGVGMKF 205
+ +LG+ +F
Sbjct: 196 HLTTLGISYRF 206
>gi|330830632|ref|YP_004393584.1| major outer membrane protein OmpAII [Aeromonas veronii B565]
gi|328805768|gb|AEB50967.1| Major outer membrane protein OmpAII [Aeromonas veronii B565]
Length = 345
Score = 41.2 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 26/154 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALY------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94
+T HD+ YAG+ + N + S+F GYN ++ G
Sbjct: 15 ASTGAQAEPVHDW---YAGVGGGWAIAHNLNDFSQDVGKDATALSLFGGYNFTEN---LG 68
Query: 95 VEGDVRY----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150
E + Y + + +S G S+ R +S+ L+A G +
Sbjct: 69 AE--IGYLSTGDWDISGHDFNSK-GATLSVIGRL--PLSEMFSLFAEGGGYIYHVESVNG 123
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
+ AG+GV L + + + YR
Sbjct: 124 GDDNLAPL----AGLGV-TARLHDWVDLQARYRY 152
>gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
Length = 368
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 31/180 (17%)
Query: 45 RYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104
+Y ++++G G G G FAGY G E +
Sbjct: 44 QYQSTGNNWDGVNIGN--------GSTHKDQIGAGAFAGYQYNQ---YLGFELGYDWLGR 92
Query: 105 VLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------- 152
+ ++ L + Y V D L +Y +G V + T
Sbjct: 93 MAYKGSYNNGAFKAQGIQLTTKLSYPVMDDLDVYTRLGGMVWRADSTATINATSAGTQKR 152
Query: 153 -EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT------ISLGVGMKF 205
+ +G E ++ ++ RLEY+ +G N +S+GV +F
Sbjct: 153 FSENDTGVSPVFALGTEY-AITPNIATRLEYQWINNIGDKGTLNARPDNGMLSVGVAYRF 211
>gi|326387223|ref|ZP_08208833.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208404|gb|EGD59211.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM
19370]
Length = 241
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 65/215 (30%), Gaps = 36/215 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K A+ + LA A A + + F G +
Sbjct: 5 MKKFQAAMVCGGM-LAIATPAFAQSGYYFEDDEEQ-------IDEKTWPALGFGGGHIEA 56
Query: 61 SALYNGSFGEEAHH---------NAGGSIFAG---YNVE-DSCIMYGVEGDVRYTVPVLA 107
++ G +A G + G Y+ + ++ G E DV +
Sbjct: 57 IVGFDHMTGHSLKDIDSTANFFNSANGVAYGGGIGYDYTLNPTMVLGAEFDVTGSTADW- 115
Query: 108 DNIHSLHGIGGS---------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI---- 154
N + + L R G+ ++ L Y G Q TG+
Sbjct: 116 KNPNVSSTFNMTRMRVGRDIFLGGRFGFLLNPKNLFYVKAGFANTQFSITGENTGETLHY 175
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
+ G G GV+ L++ A++EY S Y
Sbjct: 176 DSNSSGLRFGFGVQ-HRLTKKTYAKIEYDYSHYGS 209
>gi|291086630|ref|ZP_06356308.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291067496|gb|EFE05605.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 341
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 17/165 (10%)
Query: 54 NGPYAGLSALYNGSFGEE------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107
+G YAG + ++ + +++ G + GY + + +E +
Sbjct: 31 DGLYAGANMGWSQYYNNNDFTRGHENNDIGVGGYIGYQL---NPYFSLENGILILGDAEG 87
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAGEITPIAIGGTAGVG 166
D S+ G L + Y VS++ + G + I +G
Sbjct: 88 DKNSSMTVQGYQLSGKISYPVSNTDIYTRLGGMWYRSDYTRDDTNDSKVGTGIAPLISLG 147
Query: 167 VEVGGLSESLVARLEYRA-----SKYSKVEGFYNT-ISLGVGMKF 205
+E + ++ +R+EY+ + + N +S+G F
Sbjct: 148 IEY-AWNYNITSRVEYQWVGNIKNDAATSANVDNGLLSVGFSYHF 191
>gi|187925819|ref|YP_001897461.1| hypothetical protein Bphyt_3849 [Burkholderia phytofirmans PsJN]
gi|187717013|gb|ACD18237.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 173
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 56/175 (32%), Gaps = 34/175 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95
+ +F GPY G N G + +H A AGYN + + G
Sbjct: 22 AQSAAPQTGASEFAGPYVGFKLGVNTSDASGVVNKASHTTAFPGFTAGYNFDVDRFVAGA 81
Query: 96 E--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153
E D+ + D G L + G + + Y +G
Sbjct: 82 EVFADLHHGSTTYKD---------GGLDAKLGLPF-NQFMPYVRIGLTTDWPDIRPH--- 128
Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
G+GVE ++ + A E+ + S +G N+ ++GV F
Sbjct: 129 -------W--GLGVEY-KFAKHMSAVGEWT-TDTSNHDGTRRTNNSFTIGVQYHF 172
>gi|254511664|ref|ZP_05123731.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11]
gi|221535375|gb|EEE38363.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11]
Length = 172
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 38/118 (32%), Gaps = 6/118 (5%)
Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTVPVLA 107
D+ G Y G S Y G + GS GY+ + + G E + Y L
Sbjct: 21 AEDWTGAYVGFSFGYADVDGSGGAGGSDGSFGPLIGYDYDFGNFVLGGE--LEYNRLNLD 78
Query: 108 -DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
L++RGGY+ L Y VG A + I + G
Sbjct: 79 LGASEGSLDSMSRLKLRGGYDF-GPALGYVVVGTARASTSGNSDTAAVYGIGVAYPLG 135
>gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 355
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 50/182 (27%), Gaps = 29/182 (15%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYG 94
IA + + Y G + G ++ GYN I
Sbjct: 12 IAASGFAAAPSISATTYVGAKVGMGWLDSACVDSVNCEDDSVAGGLYGGYNF-TDNIALE 70
Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYE 147
+ D + + S+ R + ++ GP Y
Sbjct: 71 LNADYLGDYDTSFNYNGTTQRYSDSIIAISLSPMYRL--AIKQEFDVFFKAGPA----YI 124
Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKV---EGFYNTISLGVGM 203
+ +A+ G+G E ++ RLEY+ + N +++G+
Sbjct: 125 MHDDEDDVVLAL----GIGAE-KQFADDWAVRLEYQYFDDFDDKIIQNLNSNLVTVGLSY 179
Query: 204 KF 205
F
Sbjct: 180 NF 181
>gi|297521813|ref|ZP_06940199.1| outer membrane protein A [Escherichia coli OP50]
Length = 181
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92
+ P + + Y G ++ G + G F GY V
Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69
Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
G E + Y + + + G+ L + GY ++D L +Y +G V +
Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125
Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166
>gi|261756009|ref|ZP_05999718.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella suis bv. 3
str. 686]
gi|261745762|gb|EEY33688.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella suis bv. 3
str. 686]
Length = 66
Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 10/75 (13%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+G S +A+ + SA AAD + + + G Y G
Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51
Query: 63 LYNGSFGEEAHHNAG 77
Y + + G
Sbjct: 52 GYGWGRAKLENRTNG 66
>gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36]
gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36]
Length = 327
Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 56/170 (32%), Gaps = 26/170 (15%)
Query: 56 PYAGLSALYNGS-----FGEEA--HHNAGGSIFAGYNVEDSCIMYGVE------GDVRYT 102
Y G N + + G ++ GY + +E GD
Sbjct: 27 FYLGAKLGVNHYQNGCQPWNVSCDKTDEAGGVYGGYQFNQ---YFALEAAYLHLGDAVAV 83
Query: 103 VPVLADN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159
PV N ++ G+ S ++D L+A G G I +
Sbjct: 84 YPVNGLNQTYTGTMQGLELSALGLL--PITDRFSLFAKGGVYNWHATNDGPHQRIKESGL 141
Query: 160 GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE---GFYNTISLGVGMKF 205
TAG+G+ LS S ARLEY+ + E +LG+ +F
Sbjct: 142 SPTAGLGLSYQ-LSISWQARLEYQYFYELGNEEVGGSHGQLTTLGIAYQF 190
>gi|149377587|ref|ZP_01895326.1| OmpA domain protein transmembrane region-containing protein
[Marinobacter algicola DG893]
gi|149358129|gb|EDM46612.1| OmpA domain protein transmembrane region-containing protein
[Marinobacter algicola DG893]
Length = 192
Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 49/148 (33%), Gaps = 9/148 (6%)
Query: 54 NGPYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112
+G Y S Y GE N + GY + +E + D++
Sbjct: 34 SGVYLSGSYGGYKSHGGEFDDENDLFGVGLGYQFNQ---FFALEAEYIDFGNFGDDDVDG 90
Query: 113 L-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G L R ++D+ +YA G + T + G GV+
Sbjct: 91 KLKGTSLGLMGRL--PLTDTFGVYAKAGAFASSFDVDAFDESETYDEVNPFVGAGVDFR- 147
Query: 172 LSESLVARLEY-RASKYSKVEGFYNTIS 198
++E L A EY R + + F ++
Sbjct: 148 VTEQLTAFAEYNRYNVDIDEDDFNGQVT 175
>gi|88704778|ref|ZP_01102491.1| outer membrane protein A [Congregibacter litoralis KT71]
gi|88701099|gb|EAQ98205.1| outer membrane protein A [Congregibacter litoralis KT71]
Length = 184
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 21/159 (13%)
Query: 57 YAG-LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY----TVPVLADNIH 111
Y G + + + + F GY DS + + + Y D++
Sbjct: 34 YVGAGAYFTDVELSVGGEDDITPAGFIGYQFLDSN-VLMLSAEAGYYDLGAWSGTLDDVR 92
Query: 112 SLHGIGGSLRIRGGYEVSDSLL-LYATVGPDV----AQKYETGKAGEITPIAIGGTAGVG 166
Y +YA G ++ + + + T IG AGV
Sbjct: 93 YSVDASALTVAGVAYVPLGPFFEVYAKAGFAAVEVKSRFADIPRTDDDTETFIG--AGVA 150
Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
++ + ++Y + + N+ +GVG++F
Sbjct: 151 LDFFDTVDI--------YAEYLQFDNTINSQMVGVGIRF 181
>gi|78221995|ref|YP_383742.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78193250|gb|ABB31017.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 457
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 31/184 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M++L LA G + ALA +A A G + P + + +H GP G+
Sbjct: 1 MKRL-LAAGCALFALAFATTAMA-----EVKPGSFAITPYVGGYTFDGEQHIKTGPTFGI 54
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
GYN +C G+EG YT + I L
Sbjct: 55 R--------------------GGYNFTKNC---GLEGVFGYTPTEQTKRESDVDAITYRL 91
Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180
+ L+ + VG ++ AG + TAG G++ ++E+L R
Sbjct: 92 EGLYHFMPEKDLVPFLAVG-GGGITIDSEGAGVKSRTDGIVTAGGGLKY-FINEALAVRT 149
Query: 181 EYRA 184
+ R
Sbjct: 150 DGRY 153
>gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320]
gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320]
Length = 362
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 31/180 (17%)
Query: 45 RYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104
+Y ++++G G G G FAGY G E +
Sbjct: 38 QYQSTGNNWDGVNIGN--------GSTHKDQIGAGAFAGYQYNQ---YLGFELGYDWLGR 86
Query: 105 VLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------- 152
+ ++ L + Y V D L +Y +G V + T
Sbjct: 87 MAYKGSYNNGAFKAQGIQLTTKLSYPVMDDLDVYTRLGGMVWRADSTATINATSAGTQKR 146
Query: 153 -EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT------ISLGVGMKF 205
+ +G E ++ ++ RLEY+ +G N +S+GV +F
Sbjct: 147 FSENDTGVSPVFALGTEY-AITPNIATRLEYQWINNIGDKGTLNARPDNGMLSVGVAYRF 205
>gi|78221563|ref|YP_383310.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Geobacter metallireducens GS-15]
gi|78192818|gb|ABB30585.1| Thrombospondin type 3 repeat:OmpA/MotB [Geobacter metallireducens
GS-15]
Length = 447
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 6/140 (4%)
Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126
+ G + GYN ++ VEG YT + S + + +
Sbjct: 43 DRDSDLKSRPTGGLRLGYNFTEN---VAVEGSGAYTDTKYDNGNGSSNVYRYGAELLYHF 99
Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
++ + G + TAG GV+ L + + R + R +
Sbjct: 100 IPQSRVVPFLAAGLGGITYEGREGVPDADRTDGILTAGGGVK-LFLVDRIALRADGR-NI 157
Query: 187 YSKVEGFYNT-ISLGVGMKF 205
++ + + ++ G+ +F
Sbjct: 158 FTFNDALNHQEVTAGLDFQF 177
>gi|170736597|ref|YP_001777857.1| porin opacity type [Burkholderia cenocepacia MC0-3]
gi|169818785|gb|ACA93367.1| porin opacity type [Burkholderia cenocepacia MC0-3]
Length = 238
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 15/144 (10%)
Query: 68 FGEEAHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL-- 120
G + N GS+ GY + ++ + N + H L
Sbjct: 68 GGPDTGSNVTGSLGLGYQFGNGWRAEGEYVFKRTNNFTSYWAPFDANANEFHVSAQRLML 127
Query: 121 RIRGGYEVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+++ +Y T+G VA Q +T + T + +AG GV ++
Sbjct: 128 NGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRRFASKTQTNLAYSAGAGVSY-AIN 186
Query: 174 ESLVARLEYRASKYSKVEGFYNTI 197
+ L YR VE +NT
Sbjct: 187 KRFSIDLGYRYVDMGNVETGFNTF 210
>gi|59712862|ref|YP_205638.1| hypothetical protein VF_2255 [Vibrio fischeri ES114]
gi|59480963|gb|AAW86750.1| hypothetical protein VF_2255 [Vibrio fischeri ES114]
Length = 206
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 38/188 (20%)
Query: 49 IRHDFNGPYAGL-----------SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97
+ +G YAG+ S Y+ + ++ GY + G+EG
Sbjct: 26 SQPKISGFYAGVGFGSFGYSEEDSWGYSNNPISAEADGNSTKVYLGYQF---NKIVGIEG 82
Query: 98 DV-RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156
Y +S+ SL GY + + + VG ++ +
Sbjct: 83 TYTNYGEAKAKVGNYSMKPSSISLAANLGYTFKNGIRPFGLVGMSSLDLNQSEELLTDDS 142
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYR-----------ASKYSKVEGF--------YNTI 197
A G GVE + + +++R Y G +++
Sbjct: 143 GAA-FKFGFGVEY---TPKALGGVQFRAAYEMDMYAVEYLDYQSGSGLTTETNLYALDSL 198
Query: 198 SLGVGMKF 205
LG KF
Sbjct: 199 YLGASYKF 206
>gi|118581048|ref|YP_902298.1| surface antigen msp4 family protein [Pelobacter propionicus DSM
2379]
gi|118503758|gb|ABL00241.1| surface antigen msp4 family protein [Pelobacter propionicus DSM
2379]
Length = 222
Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 75/221 (33%), Gaps = 40/221 (18%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67
+ V++LA S A+P R + V T+ +R + YN
Sbjct: 6 IIVAALATLLIPSLARAEPPRPGPYVSWFVGVTVPQDRNAHSYDSW--------GSYNDR 57
Query: 68 FGEEAHHNAGGSIFAGYNVE----DSCIMY-GVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
+ + GGS AGY+ + + Y G E D Y A + H + GSL
Sbjct: 58 VEFDPGIDVGGS--AGYDFGYVRLEGELSYKGAEIDSVYD----ATSDIRYHDLDGSLSA 111
Query: 123 -----RGGYEVSD--SLLLYATVGPDVAQKYETGKAG-----------EITPIAIGGTAG 164
+++ + + Y G A Y +G G
Sbjct: 112 FAVMANCYFDLHNDTPVTPYLGGGIGFATLYLDDTSGVSNGVRWSLYDSDDDTVFAYQIG 171
Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
G+++ ++ + YR ++ +G ++ + G MKF
Sbjct: 172 AGIDIS-INRYFSLDVGYRY--FATDKGKFDEGNAGTRMKF 209
>gi|37676931|ref|NP_937327.1| hypothetical protein VVA1271 [Vibrio vulnificus YJ016]
gi|320159022|ref|YP_004191400.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|326424294|ref|NP_762742.2| outer membrane protein [Vibrio vulnificus CMCP6]
gi|37201475|dbj|BAC97297.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319934334|gb|ADV89197.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|319999680|gb|AAO07732.2| Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 193
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 11/123 (8%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGS----IFAGYNVEDSCIMYGVEGDVR-YTVPVLAD 108
NG Y G A +++ + AGY + G+E Y +
Sbjct: 26 NGFYLGAGAGSTEFDSDQSVTGKADGNALKLIAGYQF---NRIVGIEAQYSKYGDVKFST 82
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGV 167
++ SL GY ++ L Y VG E+ K + AI G+G+
Sbjct: 83 PQNTWTPTALSLNANLGYTFANGLRPYGIVGLSALDLSESTKTLESDSGAAIHF--GLGL 140
Query: 168 EVG 170
E
Sbjct: 141 EYA 143
>gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida]
Length = 348
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 77/229 (33%), Gaps = 46/229 (20%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-AL 63
A+ ++ +ALA AQAA YV + + + GL+
Sbjct: 3 KTAIALTIVALAVASVAQAA---------------PQPNTFYVGAKAGWASFHDGLNQIE 47
Query: 64 Y--NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-------HSLH 114
Y SFG + + G +F GY + D+ + D H+ H
Sbjct: 48 YVSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAKHTNH 106
Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGTAGVG 166
G SL+ Y + D L +YA VG + + A I + G
Sbjct: 107 GTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPVFAGG 164
Query: 167 VEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+E + E + V + EY +Y+ +++ G+ +F
Sbjct: 165 LEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213
>gi|1332435|emb|CAA63037.1| outer membrane protein [Aeromonas salmonicida]
gi|1588799|prf||2209353B major outer membrane protein OmpAII
Length = 330
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 57/174 (32%), Gaps = 47/174 (27%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-----NGSFGEE 71
+AQAAD D+ Y G+ A + FG++
Sbjct: 18 GTSTAQAAD--------------------------DW---YTGIGAGWAYGHDLNDFGKD 48
Query: 72 AHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130
A +A S+F GYN D Y E + Y A G S R ++D
Sbjct: 49 ADKDATALSLFGGYNFND---YYAAE--LGYLYAGKAGVDFKTQGATLSGLARL--PLND 101
Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
++A G G + T AG+G+ LS+ + + YR
Sbjct: 102 IFSVFAEGGAYFNHVNGNGNSDNGTAPL----AGLGL-TAKLSDLIDVQARYRY 150
>gi|145298280|ref|YP_001141121.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851052|gb|ABO89373.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 333
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 57/175 (32%), Gaps = 46/175 (26%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-----NGSFGEE 71
+AQAAD D+ Y G+ A + FG++
Sbjct: 18 GTSTAQAAD--------------------------DW---YTGIGAGWAYGHDLNDFGKD 48
Query: 72 AHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVS 129
A +A S+F GYN D Y E Y D + G S R ++
Sbjct: 49 ADKDATALSLFGGYNFND---YYAAELGYLYAGKAGVDGVDFKTQGATLSGLARL--PLN 103
Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
D ++A G G + T AGVG+ LS+ + + YR
Sbjct: 104 DIFSVFAEGGAYFNHVNGNGNSDNGTAPL----AGVGL-TAKLSDLIDVQARYRY 153
>gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis]
Length = 378
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 58/231 (25%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K LA+ V + A A++ V Y G
Sbjct: 7 MKKQTLALWVGLVLAGQASMALASNQVGE--------------------------FYVGG 40
Query: 61 SALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113
A + + G ++ GY D + +V Y + +S
Sbjct: 41 KAGLTQFSDECGANSLDCEEQSEGFGVYGGYQALDWLAV-----EVGYDSLGKSKADYSA 95
Query: 114 -------HGIGGSLRI-----RGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIA 158
+++ + Y +++ L+A G V + G +
Sbjct: 96 LMKPGEVAHYDATVQGIELGLKADYALTERAGLFAKAGTLLWQVEKSGSEPGLGSVNQEE 155
Query: 159 IGGTA--GVGVEVGGLSESLVARLEYRASKY--SKVEGFYNTISLGVGMKF 205
G + G GVE L+E RLEY+ + G + +GVG+ +
Sbjct: 156 DGSSLMLGAGVEYR-LTEHWNTRLEYQYFNEVGGEKTGGSDIHFIGVGLDY 205
>gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044]
gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae
gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 356
Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 39/221 (17%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ ++ALA F + A P + G + ++ G Y
Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLG---------WSQYHDTGFY---GNG 48
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGI 116
+ + G + G F GY V G E + Y + + G+
Sbjct: 49 FQNNNGPTRNDQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMAYKGSVDNGAFKAQGV 103
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDV------AQKYETGKAGEITPIAIGGTAGVGVEVG 170
L + GY ++D L +Y +G V TG + + GVE
Sbjct: 104 Q--LTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVE-W 160
Query: 171 GLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
++ + RLEY+ V + +SLGV +F
Sbjct: 161 AVTRDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF 201
>gi|254781078|ref|YP_003065491.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040755|gb|ACT57551.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 40/191 (20%)
Query: 53 FNGPYAGLSAL--YNGSFGEEAHHNA--------GGSIFAGYNVEDSCIMYGVEGDVRYT 102
++G Y GL Y + + G I G+N++ ++G+
Sbjct: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Query: 103 -VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA---QKYETGKAGEITPIA 158
+ + I G + ++ GY V DSLL+Y G A + + A
Sbjct: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
Query: 159 IGG--------TAGVGVEVGGLSESLVARLEYRA--------------SKYSKVE--GFY 194
G G+G++ ++ + YR S +V+ G
Sbjct: 173 KGRFDGHGSSVVLGIGLDY-MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
Query: 195 NTISLGVGMKF 205
+ SLG+ M F
Sbjct: 232 HIASLGINMHF 242
>gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
Length = 355
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 37/218 (16%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++ALA F + AQAA Y + ++ + +
Sbjct: 1 MKKTAIALAVALAGFATVAQAA---------------PKDNTWYTGGKLGWSQFHDVGTG 45
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG 118
+ G G F GY + G E + Y P D ++ G
Sbjct: 46 SDISNDGPTHKSQLGAGAFVGY---QANQYLGFE--MGYDWLGRMPYKGDTVNGAFKAQG 100
Query: 119 -SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITP---IAIGGTAGVGVEVGG 171
L + Y ++ L LY +G + A VG+E
Sbjct: 101 VQLAAKLSYPIAQDLDLYTRLGGMVWRADASVNEPSTNSHASAHDTGVSPLAAVGLEY-A 159
Query: 172 LSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205
++++ RL+Y+ V + L VG+ +
Sbjct: 160 VTKNWATRLDYQWVNNIGDRGTVGARPDNGMLSVGVSY 197
>gi|296104776|ref|YP_003614922.1| Opacity protein and surface antigens-like protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059235|gb|ADF63973.1| Opacity protein and surface antigens-like protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 227
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 54/156 (34%), Gaps = 25/156 (16%)
Query: 68 FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS-------- 119
G+E H G +I AGY + + EG+ YT + S
Sbjct: 57 GGKEKEHFGGAAIAAGYQFGNG---WRTEGE--YTFKQKTEYTSGSSTFANSFNHLQTET 111
Query: 120 ----LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVE 168
L + YE+ + +Y T G V++ G G T + G GV
Sbjct: 112 ERLMLNVYRDYELGYGVSVYGTAGLGVSKIKAGGWQGNAGREYASTTQSNLTYALGAGVS 171
Query: 169 VGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204
+ E L L YR K+E YN + G+K
Sbjct: 172 YTPV-ERLYVDLGYRYIDMGKIESGYNNFTNARGLK 206
>gi|28900665|ref|NP_800320.1| hypothetical protein VPA0810 [Vibrio parahaemolyticus RIMD 2210633]
gi|153836413|ref|ZP_01989080.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260365540|ref|ZP_05778077.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260877603|ref|ZP_05889958.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260895384|ref|ZP_05903880.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260901656|ref|ZP_05910051.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28809045|dbj|BAC62153.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149750315|gb|EDM61060.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308085254|gb|EFO34949.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308090632|gb|EFO40327.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308108921|gb|EFO46461.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308114365|gb|EFO51905.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|328470603|gb|EGF41514.1| hypothetical protein VP10329_07382 [Vibrio parahaemolyticus 10329]
Length = 191
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 26/175 (14%)
Query: 50 RHDFNGPYAGLSALYNGSFGEEA--------HHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
+ D +G Y G + + +++ +F GY + +E
Sbjct: 24 KKDVSGFYLGGGIGVTTVYDDSVWPYAVNLDSNDSTYKLFGGYQF---NRIVAIEAQYTR 80
Query: 102 TVPVLADNIHSLHGI----GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157
+ + + +L GY +ATVG + G +
Sbjct: 81 YGDIFDKFEDAPRTMVKPENIALMANLGYTFDSGWRPFATVGLGRTEL----DFGSSSKA 136
Query: 158 AIGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYN------TISLGVGMKF 205
AGVG E E+L R+ Y + E + + ++ GV KF
Sbjct: 137 ETSFRAGVGGEYSPKAIENLNFRIAYEVDTFVIDETYDDLTIMLGSLYAGVSYKF 191
>gi|161504592|ref|YP_001571704.1| adhesin/invasin PagN [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160865939|gb|ABX22562.1| hypothetical protein SARI_02706 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 254
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + A + + +
Sbjct: 75 DRTKGVFGGGVAIGYDFNDQFQLPVRLELDTTFRGETDAKGGQDFTAFDDTVHMNVKNQV 134
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKAGEI----------TPIAIGGTA 163
R + G Y+ +S Y + G +A+ + A
Sbjct: 135 RMSTYMVNGYYDFHNSTAFTPYISAGIGLARVKLKNNTMSEDFDINETLAASKNNFAWGA 194
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + +++++ Y+ KV N
Sbjct: 195 GIGAKY-AVTDNIAIDASYKYINAGKVSISKN 225
>gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 387
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 31/158 (19%)
Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVR----YTVPVLADNIHSLHGIGG-------- 118
+ + ++G IF GY + + G D+ V + + G
Sbjct: 69 DDNRSSGYKIFGGYQFNRNFAVEGGYFDLGNFGFNANTVPTGTLSGNIKLKGLNLDLVGT 128
Query: 119 -------SLRIRGGYEVSDSL-LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
S+ R G +D+ T + + GVG++
Sbjct: 129 LPISEKFSVLGRIGVNYADAADSFAGTGAV-----NVLNPSPSKRETNL--KVGVGLQY- 180
Query: 171 GLSESLVARLE---YRASKYSKVEGFYNTISLGVGMKF 205
+++L R E YR + +G + +SLG+ +F
Sbjct: 181 AFTDALAMRAEIERYRINDAVGNKGDIDLVSLGLIYRF 218
>gi|119468232|ref|ZP_01611358.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
gi|119448225|gb|EAW29489.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
Length = 351
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 57/176 (32%), Gaps = 26/176 (14%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGE--------EAHHNAGGSIFAGYNVEDSCIM 92
AT+ G Y G Y + E + + + G + AGY
Sbjct: 13 AATSVSTFAADKQEGFYIGAFGDYYDASWENMSAQAGLDVNESTGFGLEAGYRF-SDFWS 71
Query: 93 YGVE-GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151
+E D+ + A + I GS R G + L + GP
Sbjct: 72 ARLEYADLDFNAFDKAAGNRNN--IDGS---RFGID----ALYHLDGGPFYGLVGIKSMD 122
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI--SLGVGMKF 205
+ AGVG ++++L A +E + Y ++ Y + LG+ F
Sbjct: 123 VVDDNTFL--NAGVGY-RHFITDNLFANVE--TAVYQGIDKGYTDVGAKLGINYFF 173
>gi|295837733|ref|ZP_06824666.1| phosphoprotein phosphatase [Streptomyces sp. SPB74]
gi|197699932|gb|EDY46865.1| phosphoprotein phosphatase [Streptomyces sp. SPB74]
Length = 514
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 23 AADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPYAGLSALYN-GSFGEEAHHNA 76
AA R+A G A Y P D++ GP G G + A
Sbjct: 280 AAGLGRQAPAPGGHGSGNGAAPAYAP--EDWDEDGDYGPRRGGRRWLKRGLWTVVALAVI 337
Query: 77 GGSIFAGYNVEDSCIMYGVEGD 98
GG ++ GY + GVE D
Sbjct: 338 GGGLYGGYRWTQNQYYVGVEDD 359
>gi|145220337|ref|YP_001131046.1| porin, opacity type [Prosthecochloris vibrioformis DSM 265]
gi|145206501|gb|ABP37544.1| porin, opacity type [Chlorobium phaeovibrioides DSM 265]
Length = 189
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 19/165 (11%)
Query: 57 YAGLSALYNG-----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPVLAD 108
Y +A G +A +AG ++F + EG++ Y V +
Sbjct: 28 YVSGNAGITWMNDVDYAGHKAEMDAGFALFGAIGCDYGDTRL--EGELGYMQNDVDKVDG 85
Query: 109 NIHSLHGIGGSLRIRGGYEVS--DSLLLYATVGP--DVAQKYETGKAGEITPIAIGGTAG 164
S SL G Y++ + Y T G + G + G
Sbjct: 86 ASASGDISVISLMANGYYDIDTGGGIEPYITAGVGFAQGHAEDVTNFGTWNETTLAWQVG 145
Query: 165 VGVEVGGLSESLVARLEYRASK----YSKVEGFYNTISLGVGMKF 205
GV + +++ L YR N + +G+ + F
Sbjct: 146 AGV-AVPVGNNVMVDLRYRYFDTTDMLDDTNIGSNNLLVGMRVGF 189
>gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 365
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 71/223 (31%), Gaps = 29/223 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+++ LA L+L + AA + + T +P + + G G+
Sbjct: 7 LRQTHLAKQFILLSLLCYGVTHAA---EQQNPAQLIDEDKPQTLITLPEAYLYMGSEIGI 63
Query: 61 SALYNGSFG---EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-- 115
+ +G + ++ S FAGY +V Y A+ +
Sbjct: 64 NHYQHGCESWSIDCDKNSTMASFFAGYQFNHHLAF-----EVAYIDLGKAEATYLEASKQ 118
Query: 116 --IGGSLRIR-----GGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
GS+R + L L+A G G I + GVG+
Sbjct: 119 NIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDWSPSFGVGMT 178
Query: 169 VGGLSESLVARLEYRA------SKYSKVEGFYNTISLGVGMKF 205
LS+S ARL+Y + SLG+ +F
Sbjct: 179 YQ-LSDSWQARLQYEYFHHLGNDDIGGTNA--HATSLGISYQF 218
>gi|153834458|ref|ZP_01987125.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148869154|gb|EDL68186.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 318
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 21/158 (13%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + + F GY + D + VE +
Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDGSTLGAFVGYEMND---YFSVEAGFD-NLGDFDQTS 78
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
H +L + +++ + LY VG Y G+ +G GVE
Sbjct: 79 FGGHVEAITLAPKFSLPITEDIALYGKVGGA----YLMMNDGKDDYSYLG---AAGVEFN 131
Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
+SE++ AR EY+ + S V+ N+ +LGV KF
Sbjct: 132 -VSENVTARAEYQTITDISNDSVKAMGNSATLGVAFKF 168
>gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195]
Length = 369
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 71/223 (31%), Gaps = 29/223 (13%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
+++ LA L+L + AA + + T +P + + G G+
Sbjct: 11 LRQTHLAKQFILLSLLCYGVTHAA---EQQNPAQLIDEDKPQTLITLPEAYLYMGSEIGI 67
Query: 61 SALYNGSFG---EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-- 115
+ +G + ++ S FAGY +V Y A+ +
Sbjct: 68 NHYQHGCESWSIDCDKNSTMASFFAGYQFNHHLAF-----EVAYIDLGKAEATYLEASKQ 122
Query: 116 --IGGSLRIR-----GGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
GS+R + L L+A G G I + GVG+
Sbjct: 123 NIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDWSPSFGVGMT 182
Query: 169 VGGLSESLVARLEYRA------SKYSKVEGFYNTISLGVGMKF 205
LS+S ARL+Y + SLG+ +F
Sbjct: 183 YQ-LSDSWQARLQYEYFHHLGNDDIGGTNA--HATSLGISYQF 222
>gi|161615525|ref|YP_001589490.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161364889|gb|ABX68657.1| hypothetical protein SPAB_03297 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 239
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GYN D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYNFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y +VG +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISVGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|254497374|ref|ZP_05110177.1| hypothetical protein LDG_1620 [Legionella drancourtii LLAP12]
gi|254353427|gb|EET12159.1| hypothetical protein LDG_1620 [Legionella drancourtii LLAP12]
Length = 247
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 61/185 (32%), Gaps = 35/185 (18%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH------------------NAGGSIFA 82
IAT + F+G Y G + G+ ++ H GS+FA
Sbjct: 26 IATVLPLLATPCFSGLYVGSAVGPEGASFTQSAHVMRPGSFNVVDRAHFAGLGVFGSLFA 85
Query: 83 GYNVEDSCIMYGVEGDVR------------YTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130
GY+ + E + Y A +L G + + G+ +SD
Sbjct: 86 GYSRVYNRYYLAAEVNANISSLTYKLINDEYVHQTFAKTTFTLKNSEG-VSLLPGFFLSD 144
Query: 131 SLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
+ L Y VG + + +T G G GV L+E ++Y Y
Sbjct: 145 NTLFYGRVGYINGRLKISESDPTIRSMTKNRNGIRYGAGVRHD-LTEQWTVMMDYSQINY 203
Query: 188 SKVEG 192
+V+
Sbjct: 204 DRVKN 208
>gi|302326357|gb|ADL25558.1| P2 domain protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 398
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 14/125 (11%)
Query: 56 PYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH-SL 113
+ G S + G ++ + G + G N + + + + + + +D +H S
Sbjct: 230 FFLGGSYVAFLGDISDKVKNGFG--FYGGTNWYWNNVSFEGQINAHFNDVRSSDTLHFSN 287
Query: 114 HGIGGSLRIRGGYEVSD-SLLLYATVGPDVA-QKYETGKAGEITPIAIGGTA----GVGV 167
G + GY D SLL Y T G + + G G+
Sbjct: 288 LGWN----LNVGYYFRDISLLCYLTTGVEADFYGENKSNDDKNRSSMDSYQVYPVYGAGI 343
Query: 168 EVGGL 172
Sbjct: 344 LYDMF 348
>gi|186477368|ref|YP_001858838.1| OmpA domain-containing protein [Burkholderia phymatum STM815]
gi|184193827|gb|ACC71792.1| OmpA domain protein transmembrane region-containing protein
[Burkholderia phymatum STM815]
Length = 170
Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 30/162 (18%)
Query: 52 DFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVP 104
DF+GPY G N G+ + H + AGY ++ G E D+ +
Sbjct: 30 DFSGPYVGAKLGVNVSSASGATNKPTHSTIFPGLVAGYGFNAGPVVLGAELFADLHHGSA 89
Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164
D G + + GY + SL+ YA +G A G
Sbjct: 90 TFKD---------GGIDAKIGYPI-GSLMPYARLGVTT------------DWPASRFNYG 127
Query: 165 VGVEVGGLSE-SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+GVE + SL + + ++ N+ ++G +F
Sbjct: 128 LGVEYMVMKNLSLFSEWTHDSTDADNTHWRNNSFTIGASYRF 169
>gi|290473783|ref|YP_003466657.1| Attachment invasion locus [Xenorhabdus bovienii SS-2004]
gi|289173090|emb|CBJ79863.1| Attachment invasion locus [Xenorhabdus bovienii SS-2004]
Length = 186
Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 93 YGVEGDVRYTVPVLA----DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148
GV G + YT+ N+ SL Y +D + Y +G +
Sbjct: 74 LGVVGSLTYTLNRFENDHVGNVTKFKSDSYSLLAGPSYRFNDYISAYGMIGAAHNKIKIQ 133
Query: 149 GKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ +I+ ++ G G++ + E++ Y+ SK+S ++ T LG+G +F
Sbjct: 134 DDSEFDISKTSLAY--GAGLQFNPI-ENIAVDASYQYSKFSDIKVG--TWVLGIGYRF 186
>gi|255073905|ref|XP_002500627.1| predicted protein [Micromonas sp. RCC299]
gi|226515890|gb|ACO61885.1| predicted protein [Micromonas sp. RCC299]
Length = 819
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 35/137 (25%), Gaps = 21/137 (15%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGY 84
D V R P + Y+ + + G + G GY
Sbjct: 322 DDVDSQD-SNREDAPDADYPEDE------SDSYSEGDSREDWVGGSD-DDGFGSRHRGGY 373
Query: 85 NVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
N D GVEGD + + G + GY + + G D +
Sbjct: 374 NWVDG----GVEGD-------YSGDDDVYDEFHGGIERHSGY--REGSMSAKKPGWDGST 420
Query: 145 KYETGKAGEITPIAIGG 161
K G +
Sbjct: 421 KILEASTGTEAGSTLAW 437
>gi|261417485|ref|YP_003251168.1| hypothetical protein Fisuc_3106 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373941|gb|ACX76686.1| hypothetical protein Fisuc_3106 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 365
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 14/125 (11%)
Query: 56 PYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH-SL 113
+ G S + G ++ + G + G N + + + + + + +D +H S
Sbjct: 197 FFLGGSYVAFLGDISDKVKNGFG--FYGGTNWYWNNVSFEGQINAHFNDVRSSDTLHFSN 254
Query: 114 HGIGGSLRIRGGYEVSD-SLLLYATVGPDVA-QKYETGKAGEITPIAIGGTA----GVGV 167
G + GY D SLL Y T G + + G G+
Sbjct: 255 LGWN----LNVGYYFRDISLLCYLTTGVEADFYGENKSNDDKNRSSMDSYQVYPVYGAGI 310
Query: 168 EVGGL 172
Sbjct: 311 LYDMF 315
>gi|148475218|dbj|BAF63175.1| major outer membrane protein ompAII [Aeromonas veronii]
Length = 332
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 46/135 (34%), Gaps = 17/135 (12%)
Query: 57 YAGLSALY-----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G+ A + FG++ +A S+F GYN D Y E Y D
Sbjct: 28 YTGVGAGWAYAHGLDDFGKDTDKDATALSLFGGYNFND---YYAAELGYLYAGKAGIDGA 84
Query: 111 HSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
G S R + D ++A G G + T AG+G+
Sbjct: 85 DFKTQGATLSGIARL--PLGDIFSVFAEGGAYFNHANGNGNSDNGTAPL----AGLGL-T 137
Query: 170 GGLSESLVARLEYRA 184
LS+ + + YR
Sbjct: 138 AKLSDLIDVQARYRY 152
>gi|198275878|ref|ZP_03208409.1| hypothetical protein BACPLE_02053 [Bacteroides plebeius DSM 17135]
gi|198271507|gb|EDY95777.1| hypothetical protein BACPLE_02053 [Bacteroides plebeius DSM 17135]
Length = 1004
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 16/97 (16%)
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLL---------LYATVGP---DVAQKYETG 149
+ ++ ++ + L+ R GY VS + L +Y + G Y
Sbjct: 606 SWRIIEEDFMKEQDVFDDLKFRVGYGVSGNSLGFDAFYSRQVYGSTGWFTSADGDNYRVL 665
Query: 150 KAGEITPIAIGG--TA--GVGVEVGGLSESLVARLEY 182
A + TA VG++ G + L +EY
Sbjct: 666 GATRNANPDLKWEKTAMLNVGLDFGFFNNRLSGTVEY 702
>gi|154707620|ref|YP_001423811.1| heat resistant agglutinin [Coxiella burnetii Dugway 5J108-111]
gi|154356906|gb|ABS78368.1| heat resistant agglutinin [Coxiella burnetii Dugway 5J108-111]
Length = 181
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 59/177 (33%), Gaps = 16/177 (9%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96
+P I V +GPY GL + + GY + + I E
Sbjct: 13 AIPPIYAGGAVDTPFLNSGPYVGLHGGVALPSESDLNAGPVVGAQVGYRMGNVRI----E 68
Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSLLLYATVG------PDVAQKYET 148
G + Y L N + + +L G Y+ + L+ + VG
Sbjct: 69 GALSYYSNSLEANSDAKLRMT-TLMANGYYDFNFNAPLVPFVGVGVGWVHAWRTNNGVLL 127
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ + A G AGV +S + ++YR ++ G N I + V +F
Sbjct: 128 NRGTDNNEFAYQGIAGV---SFRVSPRVTLGVDYRYLGWTDGNGSQNLIEMSVNYQF 181
>gi|4140005|pdb|1BXW|A Chain A, Outer Membrane Protein A (Ompa) Transmembrane Domain
Length = 172
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 27/156 (17%)
Query: 47 VPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
P + + Y G ++ G + G F GY V G E
Sbjct: 2 APKDNTW---YTGAKLGWSQYHDTGLINNNGPTHENKLGAGAFGGYQV---NPYVGFE-- 53
Query: 99 VRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-TGK 150
+ Y + + + G+ L + GY ++D L +Y +G V + +
Sbjct: 54 MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTYSNV 111
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 112 YGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 146
>gi|331084766|ref|ZP_08333854.1| hypothetical protein HMPREF0987_00157 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410860|gb|EGG90282.1| hypothetical protein HMPREF0987_00157 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 702
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG-------YNVEDSCIMYGVEGDV 99
+P+ +D+ P +GL Y+ A + A G G Y ++ ++YG E DV
Sbjct: 122 IPLIYDWRAPVSGLFYDYDKGP---ASYEAPGGTMEGTIEAKWQYKIQAGKMIYGFESDV 178
Query: 100 RYTVPVLADNIHSLHGI 116
+ +L + +
Sbjct: 179 KIDDDILKKELGQNGDV 195
>gi|331678985|ref|ZP_08379657.1| adhesin/virulence factor Hek [Escherichia coli H591]
gi|331073050|gb|EGI44373.1| adhesin/virulence factor Hek [Escherichia coli H591]
Length = 245
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 46/229 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGP 56
M ++ + VS+LA+A SAQA AD + + ++ + R++ ++
Sbjct: 1 MIEMKKVIAVSALAVAGMFSAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADR 60
Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VP 104
Y G G++ G I AGY+ + + D +Y
Sbjct: 61 YKG---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDD 111
Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------- 151
D++ S + +L + Y+ + + + G A+ ++
Sbjct: 112 WSHDDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYS 170
Query: 152 ------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ + G GV ++ + L YR Y
Sbjct: 171 GRESLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSY 218
>gi|319638393|ref|ZP_07993155.1| surface protein A [Neisseria mucosa C102]
gi|317400142|gb|EFV80801.1| surface protein A [Neisseria mucosa C102]
Length = 179
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 23/165 (13%)
Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH 114
G Y A + G+ + I AGY+ D + V D YT +
Sbjct: 24 GFYVQADAGHATVKGDASVKGFSPRISAGYDFGD----FRVAAD--YTHYKSEKINTASF 77
Query: 115 GIGG-----SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------EITPIAIGGTA 163
G + +++ + Y + K T +G A
Sbjct: 78 DAEGKYHSAGVSAIYDFDLQTPVKPYVGARVAINHASAKVKTANSYYERSDTKTGVGAMA 137
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
GV E ++ ++ YR + + K+ + +S GV + F
Sbjct: 138 GVSYE---VTPNVALDAGYRYNYWGKMNSIKFHTHEVSAGVRVTF 179
>gi|238764928|ref|ZP_04625867.1| Attachment invasion locus protein [Yersinia kristensenii ATCC
33638]
gi|238696869|gb|EEP89647.1| Attachment invasion locus protein [Yersinia kristensenii ATCC
33638]
Length = 225
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 60/170 (35%), Gaps = 13/170 (7%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR 100
++ N Y + YA NG ++ H I Y E + +G+
Sbjct: 64 VSVNVYAVGESSISLGYAQSHVKANGHSLDKDHK----GINVKYRYEVNND-WGMISSFT 118
Query: 101 YT---VPVLADNIHSLHGIGGSLRIRGG--YEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
YT N G + G + +++ + LY +G + + ++
Sbjct: 119 YTDLDHDSYQGNTKIGEGDSRYYSLTTGPIFRINEYVSLYGLMGVAHGKVKFSTPDESVS 178
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
TAG GV+ ++V Y SK + V+ T LGVG +F
Sbjct: 179 ASKTSMTAGTGVQFNPY-PNVVFDASYEYSKLNDVKVG--TWILGVGYRF 225
>gi|84385444|ref|ZP_00988475.1| hypothetical protein V12B01_24959 [Vibrio splendidus 12B01]
gi|84379424|gb|EAP96276.1| hypothetical protein V12B01_24959 [Vibrio splendidus 12B01]
Length = 199
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 9/159 (5%)
Query: 55 GPYAGLSALYNGSFGEEAHH--NAGGSIFAGYNVEDSCIM-YGVEGDVRYTVPVLADNIH 111
G Y Y GS E++ + ++ GY ++ G+E + R V ++
Sbjct: 42 GFYNETELEYRGSAIEDSSDLSDFSYNLVGGYEFNTHDVVKLGLEAEHRKIGKVSYSDLM 101
Query: 112 SLHGIGGSLRIRGGYEVSDSLL-LYAT--VGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168
+ G + I+ + V +L LY + G + G +
Sbjct: 102 DIEGQAFFVNIKPKFIVQGDVLDLYVSLLAGVGSMDMEAKAFGVSGSKSEAAYQVGAELG 161
Query: 169 VGGLSESLVARLEYRAS--KYSKVEGFYNTISLGVGMKF 205
+++++ + YR + + ++ T LG F
Sbjct: 162 AI-VTDNIDIHIGYRYANVEIESIDVSPQTAYLGARYHF 199
>gi|121997311|ref|YP_001002098.1| hypothetical protein Hhal_0509 [Halorhodospira halophila SL1]
gi|121588716|gb|ABM61296.1| hypothetical protein Hhal_0509 [Halorhodospira halophila SL1]
Length = 243
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 47/249 (18%), Positives = 84/249 (33%), Gaps = 54/249 (21%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG- 59
M++ + V ++ LA+ A T +R +P F GPY G
Sbjct: 1 MRRPGIGVRRGAITLAAVAGIVAPSLASAQFGQQNT---TGFFDRTLP----FEGPYFGI 53
Query: 60 ----------LSALYNGSFGEEAHHNAG--------------GSIFAGYNVEDSCIMYGV 95
+ +G ++ + G G +F G ++ + YG
Sbjct: 54 HAAATLPSVAMEVGASGFDVDDVSFDEGDATLSFSTDAVGARGELFVGAGLQSQSLYYGA 113
Query: 96 EGDVRYTVPVLADNIHSL--------HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147
E + + D + + G G S+R+ GG + +LY + V
Sbjct: 114 EINYALGHAMADDALEAAEGLTAQVSDGYGLSVRL-GGVLEEGTSMLYGRLSYQVRNLEV 172
Query: 148 TGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLE---YRASK---YSK---VEGFY 194
++G +G GVG+E ++ R+E Y+ +S VE
Sbjct: 173 QAESGGDQASDDTTFVGIGVGVGLEYRSTQLPVMMRVEGNLYQYGDEDLFSGAHEVEFTE 232
Query: 195 NTISLGVGM 203
++LGVG
Sbjct: 233 AAMNLGVGY 241
>gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222]
gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222]
Length = 353
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 29/182 (15%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYG 94
+A + Y G + + G ++ GYN
Sbjct: 12 VAASGLAAAPSIAATTYVGAKVGMGWLDSACVDGVKCEDDSVAGGLYGGYNF-SDKFALE 70
Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYE 147
+ D ++ +L S+ R + ++ GP Y
Sbjct: 71 LSADYLGDYDTSFNSTGTLKQYSDSIVAISLSPMYRL--AIQQKFDIFFKAGPA----YI 124
Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKV---EGFYNTISLGVGM 203
+ +++ G+G E +E R+EY+ + + N +++G+
Sbjct: 125 MHDDEDDVVLSL----GIGAE-KQFAEDWALRVEYQYFDDFDDKFVQDLNSNLVTVGLSY 179
Query: 204 KF 205
F
Sbjct: 180 NF 181
>gi|206562099|ref|YP_002232862.1| opacity family porin protein [Burkholderia cenocepacia J2315]
gi|198038139|emb|CAR54089.1| opacity family porin protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 38.9 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 15/144 (10%)
Query: 68 FGEEAHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL-- 120
G E N GS+ GY + ++ + N + H L
Sbjct: 68 GGPETGSNVTGSLGLGYQFGNGWRAEGEYVFKRTNNFTSYWAPFDANANEFHVSAQRLML 127
Query: 121 RIRGGYEVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
+++ +Y T+G VA Q +T + T + +AG GV ++
Sbjct: 128 NGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRRFASKTQTNLAYSAGAGVSY-AIN 186
Query: 174 ESLVARLEYRASKYSKVEGFYNTI 197
+ L YR +E +NT
Sbjct: 187 KRFSIDLGYRYVDMGNIETGFNTF 210
>gi|156973571|ref|YP_001444478.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
gi|156525165|gb|ABU70251.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
Length = 318
Score = 38.9 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 21/158 (13%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + + F GY + D + VE +
Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDGSTLGAFVGYEMND---YFSVEAGFD-NLGDFDQTS 78
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
H +L + +++ + LY VG Y G+ +G G+E
Sbjct: 79 FGGHVEAITLAPKFSLPITEDIALYGKVGGA----YLMMNDGKDDYSYLG---AAGLEFN 131
Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
+SE++ AR EY+ + S V+ N+ +LGV KF
Sbjct: 132 -VSENVTARAEYQTITDISNDSVKAMGNSATLGVAFKF 168
>gi|241761570|ref|ZP_04759657.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373878|gb|EER63411.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 204
Score = 38.9 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 72/228 (31%), Gaps = 48/228 (21%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ A V++ A+A+ AQ PT F G
Sbjct: 1 MRKIIFAAAVATAAIAAQAPAQ------------VINTPT-----------TFRGFRIEG 37
Query: 61 SALYNGSFGEEAHHNAGG-SIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIGG 118
++ + N G AG + + + G EG + DN + G
Sbjct: 38 DIGWDRARANGVGQNNMGYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATNG 97
Query: 119 S-------------LRIRGGYEVSDSLLLYATVGPDVAQ--------KYETGKAGEITPI 157
+ IR G+ +LLYA G +
Sbjct: 98 NGGSVSTKAFQEWDASIRMGFLAQPDILLYAVGGYATTRERTLYTGVGGTGVGGYRNVGW 157
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ G + G GVE +S+ +YR S++S +LG G++F
Sbjct: 158 SDGYSVGGGVEYS-ISKMFFMNAQYRYSQFSNHTS-RQRATLGFGVRF 203
>gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae]
Length = 344
Score = 38.9 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 43/191 (22%)
Query: 47 VPIRHDFNGPYAGLSALYNGSF-------------GEEAHHNAGGSIFAGYNVEDSCIMY 93
P + + YAG ++ G + G F GY V
Sbjct: 10 APKDNTW---YAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGYQV---NPYL 63
Query: 94 GVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV---- 142
G E + Y + + G+ L + GY ++D L +Y +G V
Sbjct: 64 GFE--MGYDWLGRMAYKGSVDNGAFKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRAD 119
Query: 143 --AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT 196
TG + + GVE ++ + RLEY+ V +
Sbjct: 120 SKGNYASTGVSRSEHDTGVSPVFAGGVE-WAVTRDIATRLEYQWVNNIGDAGTVGTRPDN 178
Query: 197 --ISLGVGMKF 205
+SLGV +F
Sbjct: 179 GMLSLGVSYRF 189
>gi|9256903|pdb|1QJP|A Chain A, High Resolution Structure Of The Outer Membrane Protein A
(Ompa) Transmembrane Domain
Length = 171
Score = 38.9 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 27/156 (17%)
Query: 47 VPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
P + + Y G ++ G + G F GY V G E
Sbjct: 1 APKDNTW---YTGAKLGWSQYHDTGLINNNGPTHENKLGAGAFGGYQV---NPYVGFE-- 52
Query: 99 VRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-TGK 150
+ Y + + + G+ L + GY ++D L +Y +G V + +
Sbjct: 53 MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTYSNV 110
Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186
G+ + GVE ++ + RLEY+ +
Sbjct: 111 YGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 145
>gi|148266343|ref|YP_001233049.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399843|gb|ABQ28476.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 454
Score = 38.9 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 61/211 (28%), Gaps = 40/211 (18%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ + V +A AA + G+
Sbjct: 1 MKKISCYLMVLLFLFVIASTAAAAGIQPDSFTLS------------------------GI 36
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPVLADNIHSLHGIG 117
Y+ + I GYN GVE Y +++ G
Sbjct: 37 VGGYSFDGKQHLETRPVVGIRGGYNFTK---YVGVEALFDYVRTEGTRAGLGDANVYRYG 93
Query: 118 GSLRIRGGYEVSDS-LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
G + + + DS L+ Y G + GVG++ L+++L
Sbjct: 94 GDV---LLHILPDSDLVPYLAAGY-GGLTLDRENQKTNNHGVFDY--GVGLKY-FLTDNL 146
Query: 177 VARLEYRASKY--SKVEGFYNTISLGVGMKF 205
R ++R + S + + GV +F
Sbjct: 147 ALRGDFRHLVFRDSGETLYNYEYTAGVAYQF 177
>gi|330446560|ref|ZP_08310212.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490751|dbj|GAA04709.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 203
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 59/192 (30%), Gaps = 33/192 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------HNAGGS----IFAGYNV 86
+ + + G Y G + N GG+ I AGY
Sbjct: 18 AVASENTTNSNKYQGFYVGAGVGTTDFHDDRESFLKNNHTVGYSNDGGAESYKIIAGY-- 75
Query: 87 EDSCIM-----YGVEGDVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGP 140
+ + I+ Y GDV+YT+ SL GY + L +ATVG
Sbjct: 76 QFNRIVSLEAQYTAYGDVKYTLETNGIKATGKTKHESFSLAANLGYTFDNGLRPFATVG- 134
Query: 141 DVAQKYETGKAGEITPIAIGGTAGVGVEVG-GLSESLVARLEYR---ASKYSKVEGFYNT 196
Q + I G G+E L R Y + + V+ F +
Sbjct: 135 -FGQISLKDSMIKDDGGLI--RLGAGLEYQVKQVPGLGIRAAYEADFYTLETAVKDFDQS 191
Query: 197 I---SLGVGMKF 205
+ LG KF
Sbjct: 192 VGSWYLGTTYKF 203
>gi|251793586|ref|YP_003008315.1| outer membrane protein 18/16 [Aggregatibacter aphrophilus NJ8700]
gi|247534982|gb|ACS98228.1| outer membrane protein 18/16 [Aggregatibacter aphrophilus NJ8700]
Length = 185
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 17/179 (9%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV-EGD 98
+ DF G G+ ++A + + A Y ++ G+ EG
Sbjct: 11 AAVLVSTSAVASDFTGFGVGVDVGTTKY--KDAKRISNVDLIADYGIDYGNNFVGIIEGK 68
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGG------YEVSDSLLLYATVGPDVAQKYET---- 148
++ L D+ + + R R G Y V+ ++L YA +G A+
Sbjct: 69 LKLNNSTLRDH-YGYSHLKIKERTRLGVSYLQGYRVTPNILPYAKIGVQTAKFKAEYREP 127
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY--RASKYSKVEGFYNTISLGVGMKF 205
G + + G G GV+ L+ + LEY +K+ + NT S +F
Sbjct: 128 GYSSTSSETKNGIGFGAGVKAS-LTPNFELGLEYLRSHTKFDGYKLKGNTFSTNATYRF 185
>gi|170727714|ref|YP_001761740.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169813061|gb|ACA87645.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 177
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 11/140 (7%)
Query: 44 NRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYT 102
D G Y G Y E + +A +AGY+ +E T
Sbjct: 17 ATSATAAPDIQGYYIGAMGGYGELEANEFNESAASYGGYAGYSFGKD---LAIESTFFTT 73
Query: 103 VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGT 162
+ + + +L + + S + ++ +G AG A G
Sbjct: 74 ANLADEGDVKARAV--TLAAKLNHFFSPTYSMFIKIGVASTDV----SAGIDDYSATGWI 127
Query: 163 AGVGVEVGGLSESLVARLEY 182
G G +++++ RL Y
Sbjct: 128 WGAGFN-MAITDNVNVRLGY 146
>gi|220904319|ref|YP_002479631.1| surface antigen msp4 family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868618|gb|ACL48953.1| surface antigen msp4 family protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 223
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 22/138 (15%)
Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-HSLHGIGGSLRIR-- 123
G+ + + GG F GY+ + + + ++ Y + ++ + HG+ +L+ R
Sbjct: 52 DTGDYSQNTVGGGAFVGYDFYPANDI-PLRAEIEYAIRTNSETDWDAKHGLDATLKGRWN 110
Query: 124 -------GGYEVSDS--LLLYATVGPDVAQKYET--------GKAGEITPIAIGGTAGVG 166
++ + Y G + + AG G
Sbjct: 111 LQTLFLNVYWDFHNDTAFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYNTVFAWNAGAG 170
Query: 167 VEVGGLSESLVARLEYRA 184
V +E++ A L YR
Sbjct: 171 VSY-AFTETISADLAYRF 187
>gi|325661638|ref|ZP_08150262.1| hypothetical protein HMPREF0490_00996 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472165|gb|EGC75379.1| hypothetical protein HMPREF0490_00996 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 702
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG-------YNVEDSCIMYGVEGDV 99
+P+ +D+ P +GL Y+ A + A G G Y ++ ++YG E DV
Sbjct: 122 IPLIYDWRAPVSGLFYDYDKGP---ASYEAPGGTMEGAIEAKWQYKIQGGKMIYGFESDV 178
Query: 100 RYTVPVLADNIHSLHGI 116
+ +L + +
Sbjct: 179 KIDDDILKKELGQNGDV 195
>gi|117618219|ref|YP_855821.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559626|gb|ABK36574.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 333
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 46/175 (26%)
Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-----NGSFGEE 71
+AQAA +D+ Y G+ A + FG++
Sbjct: 18 GTSTAQAA--------------------------NDW---YTGIGAGWAYGHDLNDFGKD 48
Query: 72 AHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVS 129
A +A S+F GYN D+ +G E Y D + G S R +
Sbjct: 49 ADKDATALSLFGGYNFNDN---FGAELGYLYAGKGGVDGVDFKTQGATLSGLARL--PLG 103
Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
D ++A G G + T AG+GV LS+ + + YR
Sbjct: 104 DIFSVFAEGGAYFNHVNGNGSSDNGTAPL----AGLGV-TAKLSDLIDLQARYRY 153
>gi|152994404|ref|YP_001339239.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150835328|gb|ABR69304.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 359
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 23/151 (15%)
Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDS---CIMYGVEGDVRYTVPVLADNIHSLHGIGG 118
YN + + S+ GY + +Y + +N+
Sbjct: 39 GYYNMDSDRDIKDDKAYSLGLGYQFNNPWAVEFVY-----LNADSKQAGNNVDVDQ---- 89
Query: 119 SLRIRGGYEV----SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174
R+ G Y + + +L Y G + +G AG G++ L++
Sbjct: 90 -YRLDGLYHLPTISNVNLTPYLAAGVGTTD--FSNASGHDNVQVN---AGGGLKY-ALND 142
Query: 175 SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
++ R ++R + N SLGV M F
Sbjct: 143 TVSLRADFRLVNDVEDHHLDNVTSLGVQMTF 173
>gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 38.5 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 48/233 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ + +LA+AS A YV + + + GL
Sbjct: 1 MKKTAIALTIVALAVASVAQAV-----------------PQPNTFYVGAKAGWASFHDGL 43
Query: 61 S-ALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI------- 110
+ Y SFG + + G +F GY + D+ + D
Sbjct: 44 NQIEYKSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAK 102
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGT 162
H+ HG SL+ Y + D L +YA VG + + A I +
Sbjct: 103 HTNHGTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPV 160
Query: 163 AGVGVEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
G+E + E + V + EY +Y+ +++ G+ +F
Sbjct: 161 FAGGLEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213
>gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 376
Score = 38.5 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119
+ + ++ S + + G IF GY + ++ + G D+ A + + + G
Sbjct: 55 IGSGFSSSTIVDDDRSTGYKIFGGYQINNNFAVEGGYFDLG-NFGYTATTVPAGT-LDGR 112
Query: 120 LRIR------GG-YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--------GGTAG 164
+++R G +S+ ++ G + AQ ++ +A G
Sbjct: 113 IKLRGLNLDLVGTLPLSEKFSVFGRAGLNYAQARDSFSGTGAVQVANPNPRKNDTNYKLG 172
Query: 165 VGVEVGGLSESLVARLE---YRASKYSKVEGFYNTISLGVGMKF 205
+G++ L+ESL R E YR + G + +S+G+ +F
Sbjct: 173 LGLQY-ALTESLAVRAEAERYRVNDAIGNRGHVDLVSVGLIYRF 215
>gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi]
gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi]
gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi]
gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi]
Length = 360
Score = 38.5 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 43/220 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ V+ A+AS +A A+ V YV + + + G+
Sbjct: 1 MKKSLVALAVAGFAVASANAAPEANSV------------------YVGAKAGWASFHDGI 42
Query: 61 SALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH------S 112
S + + + G+ ++ F GY I+ + +V Y + S
Sbjct: 43 SQIDHKNGGKYGINKNSVTYGAFVGY-----QIIDNLAAEVGYEYFGRVRGLEQTKAGGS 97
Query: 113 LHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQK------YETGKAGEITPIAIGG 161
S +G YEV L YA G + +T + +
Sbjct: 98 KKTFRHSAHGTTIALKGNYEVISGLDTYAKAGIALVNNSYKTVNVDTKVPTKTSRFQSSL 157
Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGV 201
G GVE ++ SL AR+EY+ + + +GV
Sbjct: 158 ILGAGVEY-AITPSLGARIEYQWLNNAGKASYATLRRMGV 196
>gi|163802616|ref|ZP_02196508.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
gi|159173699|gb|EDP58518.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
Length = 315
Score = 38.5 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 21/158 (13%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + + F GY + D + VE V
Sbjct: 23 YMGGKMGKSWVDDACVAGQACDKDGSTLGAFVGYEMND---YFAVEAGFD-NVGDFDQTS 78
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
H +L + V++ + LY VG Y G+ +G GVE
Sbjct: 79 LGGHVEAITLAPKFSLPVTEDIALYGKVGGA----YLMMNDGKDDFSYLG---AAGVEFN 131
Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
+SE++ AR EY+A + S V+ N+ +LGV KF
Sbjct: 132 -ISENVTARAEYQAITDISNDAVKAMGNSATLGVAFKF 168
>gi|168819104|ref|ZP_02831104.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205343988|gb|EDZ30752.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320084561|emb|CBY94353.1| Opacity protein opA58 Flags: Precursor [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 239
Score = 38.5 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFDINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|56552386|ref|YP_163225.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753935|ref|YP_003226828.1| outer-membrane immunogenic protein precursor; secreted protein
[Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56543960|gb|AAV90114.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258553298|gb|ACV76244.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 204
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 74/228 (32%), Gaps = 48/228 (21%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ A V++ A+A+ AQ PT F G
Sbjct: 1 MRKIIFAAAVATAAIAAQAPAQ------------VINTPT-----------TFRGFRIEG 37
Query: 61 SALYNGSFGEEAHHNAGG-SIFAGYNVEDSC-IMYGVEG---DVRYTVPVLADNIHSLHG 115
++ + N G AG + + + G EG + N + G
Sbjct: 38 DIGWDRARANGVGQNNMGYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATTG 97
Query: 116 IGGSL----------RIRGGYEVSDSLLLYATVGPDVAQ--------KYETGKAGEITPI 157
GGS+ IR G+ +LLYA G +
Sbjct: 98 NGGSVSTKAFQEWDASIRMGFLAQPDILLYAVGGYATTRERTLYTGVGGTGVGGYRNVGW 157
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ G + G GVE +S+ +YR S++S +LG G++F
Sbjct: 158 SDGYSVGGGVEYS-ISKMFFMNAQYRYSQFSNHTS-RQRATLGFGVRF 203
>gi|289669429|ref|ZP_06490504.1| membrane protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 124
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
Query: 120 LRIRGGYEVSDS--LLLYATVGPDVAQ--------KYETGKAGEITPIAIGGTAGVGVEV 169
+R R GY + + L Y T G + A G AG+G++
Sbjct: 1 MRGRIGYALGEHGDYLAYVTAGVARGEFDHSFNSSNTANSFTSSGGDSADGYQAGIGLQR 60
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
LS+++ +EY ++ + +G G
Sbjct: 61 W-LSDNVSVGVEYLFTRLQD---DATRVRVGPG 89
>gi|269961586|ref|ZP_06175948.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833627|gb|EEZ87724.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 318
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 21/158 (13%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + + F GY + D + VE +
Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDGSTLGAFVGYEMND---YFSVEAGFD-NLGDFDQTS 78
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
H +L + +++ + LY VG Y G+ +G G+E
Sbjct: 79 FGGHVEAITLAPKFSLPITEDIALYGKVGGA----YLMMNDGKDDYSYLG---AAGLEFN 131
Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
+SE++ AR EY+ + S V+ N+ +LGV KF
Sbjct: 132 -ISENVTARAEYQTITDISNDSVKAMGNSATLGVAFKF 168
>gi|168465379|ref|ZP_02699261.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195631629|gb|EDX50149.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 239
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKSGQDIIAFGDPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|269104129|ref|ZP_06156825.1| transporter [Photobacterium damselae subsp. damselae CIP 102761]
gi|268160769|gb|EEZ39266.1| transporter [Photobacterium damselae subsp. damselae CIP 102761]
Length = 201
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 29/111 (26%), Gaps = 13/111 (11%)
Query: 54 NGPYAGLSALYNGSFGEEAH---------HNAGGSIFAGYNVEDSCIMYGVEGDVR-YTV 103
GPY G++ G + G I AGY + + YGVE Y
Sbjct: 26 AGPYIGVNIGSGGMDTPDLEVNQTSSYELRGLAGGIDAGYLWQTQQVEYGVELGFDTYAK 85
Query: 104 PVLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151
G L Y S ++ G + T
Sbjct: 86 NKYRIGDFFRMDYKGYNLDLLGVAKYNFSSQWNVFGKAGLAYVNQKLTVDG 136
>gi|239832569|ref|ZP_04680898.1| outer surface protein [Ochrobactrum intermedium LMG 3301]
gi|239824836|gb|EEQ96404.1| outer surface protein [Ochrobactrum intermedium LMG 3301]
Length = 290
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 50/176 (28%), Gaps = 36/176 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ + V+ +A +A AAD + +P + +G Y
Sbjct: 6 MKCISAIAIVAVSLMAGSSAAFAADIIAE------------PVIEPMPEPVNASGWYIRG 53
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIMYGVEGDVRYTVPVLADNIHSLHGIG- 117
YN + GG +N + G++ +RY L G+G
Sbjct: 54 DLGYNF------KSSTGGE----WNFWNQFDPPYRGIDDTLRYDDFNLKAGATYGVGVGY 103
Query: 118 ---GSLRI-------RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163
+ R R G Y G + + E + A TA
Sbjct: 104 RFTDTFRADATLDYFRAGINGRTPCPSYVKSGKGLNPVEDNCNY-EDSSTANIWTA 158
>gi|300922124|ref|ZP_07138263.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
gi|300421526|gb|EFK04837.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
Length = 249
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 78/253 (30%), Gaps = 62/253 (24%)
Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGPYAG 59
+ + VS+LA+A SAQA AD + + ++ + R++ ++ Y G
Sbjct: 8 MKKIMAVSALAVAGMFSAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADRYKG 67
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VPVLA 107
G++ G I AGY+ + + D +Y
Sbjct: 68 ---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSH 118
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA-------------- 151
D++ S + +L + Y+ + + + G A+ ++
Sbjct: 119 DDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRE 177
Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK----------------VEG 192
+ + G GV ++ + L YR V+
Sbjct: 178 SLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDV 236
Query: 193 FYNTISLGVGMKF 205
+ I LGV F
Sbjct: 237 KSHDIMLGVTYNF 249
>gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 48/233 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ + +LA+AS A YV + + + GL
Sbjct: 1 MKKTAIALTIVALAVASVAQAV-----------------PQPNTFYVGAKAGWASFHDGL 43
Query: 61 S-ALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI------- 110
+ Y SFG + + G +F GY + D+ + D
Sbjct: 44 NQIEYKSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAK 102
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGT 162
H+ HG SL+ Y + D L +YA VG + + A I +
Sbjct: 103 HTNHGTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPV 160
Query: 163 AGVGVEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
G+E + E + V + EY +Y+ +++ G+ +F
Sbjct: 161 FAGGLEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213
>gi|254516258|ref|ZP_05128318.1| putative outer membrane protein [gamma proteobacterium NOR5-3]
gi|219675980|gb|EED32346.1| putative outer membrane protein [gamma proteobacterium NOR5-3]
Length = 167
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 21/159 (13%)
Query: 57 YAG-LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY----TVPVLADNIH 111
Y G + + + + F GY DS ++ + +V Y D+++
Sbjct: 17 YVGAGAYFTDVEIAAGGEDDITPAGFVGYQFLDSNLLM-LSAEVGYYDLGAWSGSLDDVN 75
Query: 112 SLHGIGGSLRIRGGYEVSDSLL-LYATVGPDVAQKY----ETGKAGEITPIAIGGTAGVG 166
Y +YA G + +T + + T IG AGV
Sbjct: 76 YSVDASALTFAGVAYVPLGPFFEVYAKAGLAAVEVKTRFADTPRTDDDTETFIG--AGVA 133
Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
++ + ++Y + + ++ +GVG++F
Sbjct: 134 LDFFDTVDI--------YAEYLQFDNQIDSQMIGVGIRF 164
>gi|205351630|ref|YP_002225431.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205271411|emb|CAR36219.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326626661|gb|EGE33004.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 239
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|88813477|ref|ZP_01128712.1| hypothetical protein NB231_00430 [Nitrococcus mobilis Nb-231]
gi|88789267|gb|EAR20399.1| hypothetical protein NB231_00430 [Nitrococcus mobilis Nb-231]
Length = 137
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156
D +V + S G S+ G + LLY VG +
Sbjct: 20 ADGNVSVNGAGLKLESEETYGASVLF--GRRIVPGALLYGRVGWQWLNSTARLNGDSDSQ 77
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G AG G + LS+ + R+EY S Y
Sbjct: 78 RLNGIRAGAGG-MWALSDMVTFRIEYTHSFYQS 109
>gi|197250348|ref|YP_002145288.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197214051|gb|ACH51448.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 219
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 27/147 (18%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKV 190
G+G + ++++++ Y+ KV
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKV 205
>gi|295132772|ref|YP_003583448.1| tonB dependent receptor [Zunongwangia profunda SM-A87]
gi|294980787|gb|ADF51252.1| tonB dependent receptor [Zunongwangia profunda SM-A87]
Length = 454
Score = 38.1 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 10/124 (8%)
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
Y+ + S+ G+N+ + M + +V + G+ SL
Sbjct: 48 GYSAFGANTNKYGTFPSLAVGWNIHNEDFMKNAD-EVNNLKLRFSYGQTGNRGVNKSLAG 106
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
+LYA G + G T +G++ G L+ + +E
Sbjct: 107 ---------TILYAFGGTAYTGTFLAGLGNPNLVWETTTTVNLGIDFGFLNNRINGTVEI 157
Query: 183 RASK 186
S
Sbjct: 158 YHSN 161
>gi|253701760|ref|YP_003022949.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776610|gb|ACT19191.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 486
Score = 38.1 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 64/208 (30%), Gaps = 26/208 (12%)
Query: 1 MQKLFLAVGVSS-LALASFCSAQAADPVRRAH--HGGRGVVPTIATNRYVPIRHDFNGPY 57
M K+ LA+ + +++ C + AA + GG V PT+ + +GP
Sbjct: 1 MSKIVLALVCALIMSITFPCGSSAAPRKKGQPITTGGFSVTPTVGWYNFEGADLFESGPI 60
Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117
GL Y G N+ DS G+EG V Y L S
Sbjct: 61 TGLKFGYE---------------HIGKNIADS---IGIEGTVNYVSTKLKTGSESASAYL 102
Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177
L + D Y G + GV V+ + E LV
Sbjct: 103 LRLDALYPVLLKDKTAPYIVAGI--GDLRTKAGSLSDDSPLFNY--GVTVKY-FMEEYLV 157
Query: 178 ARLEYRASKYSKVEGFYNTISLGVGMKF 205
R + R N L VG+ +
Sbjct: 158 LRADARHLLVYNNINTNNNFELSVGVSY 185
>gi|16763689|ref|NP_459304.1| adhesin/invasin protein PagN [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167993323|ref|ZP_02574418.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168240044|ref|ZP_02664976.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261280|ref|ZP_02683253.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|194447578|ref|YP_002044291.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197266028|ref|ZP_03166102.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198244187|ref|YP_002214261.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|207855791|ref|YP_002242442.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|81523864|sp|Q8ZRJ9|PAGN_SALTY RecName: Full=Outer membrane protein PagN; AltName:
Full=Adhesin/invasin protein PagN; Flags: Precursor
gi|16418808|gb|AAL19263.1| homolog of sapA [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194405882|gb|ACF66101.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197244283|gb|EDY26903.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197938703|gb|ACH76036.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205328580|gb|EDZ15344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205339886|gb|EDZ26650.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205349833|gb|EDZ36464.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707594|emb|CAR31876.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261245532|emb|CBG23326.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267991998|gb|ACY86883.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301156922|emb|CBW16403.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911275|dbj|BAJ35249.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224967|gb|EFX50028.1| Peptide transport periplasmic protein sapA [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323128624|gb|ADX16054.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|326622004|gb|EGE28349.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|332987255|gb|AEF06238.1| SapA-like protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 239
Score = 38.1 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|194337226|ref|YP_002019020.1| porin, opacity type [Pelodictyon phaeoclathratiforme BU-1]
gi|194309703|gb|ACF44403.1| porin, opacity type [Pelodictyon phaeoclathratiforme BU-1]
Length = 212
Score = 38.1 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 21/126 (16%)
Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL-----HGIGG--SLRIRGGYEVSDSLL- 133
AG + ED Y +E ++ Y + G SL G Y+ + +
Sbjct: 67 AGLDFED----YRIEAELSYQKGDVNRGTEHGGTADMQGFKSVTSLMANGYYDFNPEGIN 122
Query: 134 LYATVGPDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185
Y T G ++ +G G G+ + ++ + +YR S
Sbjct: 123 PYLTGGLGCSRVNFDNVKVKGAPYPGLTEHHTVLGYQLGAGIGIP-ITREVTVDAQYRYS 181
Query: 186 KYSKVE 191
+S++
Sbjct: 182 GHSRIS 187
>gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida]
gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida]
gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida]
gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 38.1 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 48/233 (20%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K +A+ + +LA+AS A YV + + + GL
Sbjct: 1 MKKTAIALTIVALAVASVAQAV-----------------PQPNTFYVGAKAGWASFHDGL 43
Query: 61 S-ALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI------- 110
+ Y SFG + + G +F GY + D+ + D
Sbjct: 44 NQIEYKSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAK 102
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGT 162
H+ HG SL+ Y + D L +YA VG + + A I +
Sbjct: 103 HTNHGTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPV 160
Query: 163 AGVGVEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
G+E + E + V + EY +Y+ +++ G+ +F
Sbjct: 161 FAGGLEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213
>gi|200389864|ref|ZP_03216475.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602309|gb|EDZ00855.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 239
Score = 38.1 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|213865487|ref|ZP_03387606.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 233
Score = 38.1 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 16/116 (13%)
Query: 81 FAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLY 135
F GY V G E + Y P DN + + G L + GY ++D L +Y
Sbjct: 1 FGGYQV---NPYVGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVY 55
Query: 136 ATVG--PDVAQKYETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186
+G A G T + G+E ++ + RLEY+ +
Sbjct: 56 TRLGGMVWRADTKSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 110
>gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 371
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 35/159 (22%)
Query: 79 SIFAGYN-VEDSCIMYGVEGDVRYTVPVLADN------IHSLHGIGGSLRIRGGYEVSDS 131
+F GY + + E Y V ++ HS HG+ +L+ YEV +
Sbjct: 71 GVFGGYQILNQNNFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKP--SYEVLPN 128
Query: 132 LLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183
L +Y VG V + + + G GVE L E L AR+EY+
Sbjct: 129 LDVYGKVGVAVVRNDYKEYGAENTNEPTEKFHKLKASTILGAGVEYAILPE-LAARIEYQ 187
Query: 184 A-------------SKYSKVEGFY----NTISLGVGMKF 205
S V+ Y ++++ G+ +F
Sbjct: 188 YLNKAGNLNKALVRSGTQDVDFQYAPDIHSVTAGLSYRF 226
>gi|264680428|ref|YP_003280338.1| Opacity protein-like surface antigen [Comamonas testosteroni CNB-2]
gi|262210944|gb|ACY35042.1| Opacity protein-like surface antigen [Comamonas testosteroni CNB-2]
Length = 223
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 25/148 (16%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119
G+E++ GGS+ GY + + + VE + YT+P + S
Sbjct: 54 GDESNTATGGSLALGYQLPSN---WRVEAE--YTLPKNNEFTSGSTRFPTSFNHHQIRSQ 108
Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169
+ + ++ LY G +A+ +G G T + + G GV
Sbjct: 109 RLMVNAYKDFPLNARFSLYGMAGLGLARLESSGWQGNPGRQYISDTQSNLAYSVGFGVSY 168
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTI 197
+ + L L +R K + N
Sbjct: 169 SPV-QKLSIDLGWRYVDMGKAKSGANNF 195
>gi|257464192|ref|ZP_05628572.1| Serine protease [Fusobacterium sp. D12]
gi|317061711|ref|ZP_07926196.1| predicted protein [Fusobacterium sp. D12]
gi|313687387|gb|EFS24222.1| predicted protein [Fusobacterium sp. D12]
Length = 753
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 161 GTAGVGVEVGGLSE-SLVARLEYRASKYSKVEGFYNTIS-LGVGMKF 205
T G G++ SL+ R Y +Y + N++S G G+ F
Sbjct: 679 WTVGAGLQYHIFDNFSLLGR--YNYMQYYDLHNHQNSLSGFGAGIGF 723
>gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 352
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 52/202 (25%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH--------------HNAGGSIFAGYNV 86
A + + + Y G ++ +G + + ++ G F GY +
Sbjct: 15 AANAQAAGQDNTW---YGGAKLGWSNFYGVDHNQAIKDDYAISEEDKNDVGAGAFLGYQI 71
Query: 87 EDSCIMYGVEGDVRYTV---------------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131
+ GVE + Y + D I + L ++ G VS+S
Sbjct: 72 NQN---LGVE--LGYDWLGKYKYTATDKLIPTDISRDEIKAQLA---QLTMKIGLPVSES 123
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS------ 185
L LY +G A + +G +G E + ARLEY+ +
Sbjct: 124 LDLYTRLGGAYAWTDSKQLDNDNGAAFVG---ALGAEY-AFNRDWAARLEYQYTTPLGDK 179
Query: 186 --KYSKVEGFYNTISLGVGMKF 205
+ E +++GV +F
Sbjct: 180 ALDKTGAELDNGLLAVGVVYRF 201
>gi|167553110|ref|ZP_02346860.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205322381|gb|EDZ10220.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 239
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 37/221 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ F AV + L +A +A A D + G VV N NG
Sbjct: 1 MKNFF-AVCIIPLVVAWSATASAKDGIYITGKAGTSVVNVYGINSTFSQDEIVNG----- 54
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIH 111
+ + + GG + GY+ D + E D + ++A
Sbjct: 55 ----HATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDP 110
Query: 112 SLHGIGGSLR-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEI 154
+ +R + G Y+ +S Y + G +A +
Sbjct: 111 VHINVKNQIRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSA 170
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
+ AG+G + ++++++ Y+ KV N
Sbjct: 171 SKNNFAWGAGIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 347
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 49/151 (32%), Gaps = 25/151 (16%)
Query: 47 VPIRHDFNGPYAGLSALYNGS------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR 100
V +F G + GL A N S A + + + GYN + ++ GV G
Sbjct: 19 VAQAGEFTGGWIGLKAGNNNSDVTSLVAAASAKNASTYGLEGGYNWDMGGLLLGVNGFAD 78
Query: 101 YT----VPVLADNIHSLHGIGGSLRIRGGYEV-----SDSLLLYATVGPDVAQKYETGKA 151
+ + S +G G +V S + L YA VG
Sbjct: 79 FNQKVDHATATPGVVSNYGSDA-----LGLDVKLGLPSGNWLPYAKVGYASVAAKGVAVT 133
Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEY 182
G + + G+GVE + EY
Sbjct: 134 GTGSGAHL----GLGVEY-KFAPHWSVAGEY 159
>gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 356
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 53/166 (31%), Gaps = 29/166 (17%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVP 104
Y G + G I++GYN D +G+E GD + +
Sbjct: 28 YVGAKVGMGWLDSACVDGTKCDDDAIGAGIYSGYNFSDK---FGIELSSDFLGDYKTSFT 84
Query: 105 VLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163
I SL V ++ GP GE + +A
Sbjct: 85 KNGTTSQFSDPIIAISLTPMYRLAVQQEFDVFFKAGPAY-----ISHGGEDDVVL---SA 136
Query: 164 GVGVEVGGLSESLVARLEYRA-SKYSK---VEGFYNTISLGVGMKF 205
G+G+E LS R+EY+ + + N +S+GV F
Sbjct: 137 GIGLE-KQLSSDWAVRVEYQYFDDFDDNYVQDLNSNLLSVGVSYNF 181
>gi|62178877|ref|YP_215294.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62126510|gb|AAX64213.1| sapA-like protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322713329|gb|EFZ04900.1| sapA-like protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 239
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQI 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|99032472|pdb|2GE4|A Chain A, High-Resolution Solution Structure Of Outer Membrane
Protein A Transmembrane Domain
Length = 177
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 13/149 (8%)
Query: 47 VPIRHDF-NGPYAGLSALYNGSF----GEEAHHNAGGSIFAGYNVEDSCIMYGVEG--DV 99
P + + G G S ++ F G + G F GY V G E D
Sbjct: 2 APKDNTWYTGAKLGFSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFEMGYDF 58
Query: 100 RYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYAT-VGPDVAQKYETGKAGEITPI 157
+P + + G L + GY ++D L +Y G ++ G+
Sbjct: 59 LGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVFRADTKSNVYGKNHDT 118
Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASK 186
+ GVE ++ + RLEY+ +
Sbjct: 119 GVSPVFAGGVEY-AITPEIATRLEYQFTN 146
>gi|1136304|gb|AAB06592.1| tia invasion determinant [Escherichia coli ETEC H10407]
Length = 251
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 44/231 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59
M ++ + VS+LA+A SAQA AD + + ++ R DF
Sbjct: 1 MIEMKKVIAVSALAMAGMFSAQALADESKTGFYVTGKAGASVVMQTDQRFRQDF------ 54
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110
+Y G++ G + GY+ + + YG D RYT+ +
Sbjct: 55 GDDVYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPM 114
Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160
R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGE 174
Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 ISDISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 224
>gi|189501037|ref|YP_001960507.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
gi|189496478|gb|ACE05026.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
Length = 203
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 53/199 (26%), Gaps = 27/199 (13%)
Query: 1 MQKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDF---NGP 56
M+K F + L A AA P G + + A + V + + G
Sbjct: 1 MKKSFSFFIGTLLVFLFSSPLAHAAAPYASLSAGLGFLTNSSADDGVVKVEDVWGFNTGY 60
Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV----LADNIHS 112
+ +G GY + G+E + V N +
Sbjct: 61 LVNGAVGLDGDMYRVEAA-------IGYQSNSIDTLLGIEIPGDWNWRVSILSFMANGYL 113
Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGL 172
GS ++ Y T G +A G G+ +
Sbjct: 114 DIESEGS-----------TVTPYLTAGAGIANVSFNDGITSDDDTVFAYQLGAGIGFE-V 161
Query: 173 SESLVARLEYRASKYSKVE 191
SE + YR S V+
Sbjct: 162 SEDTTVDVGYRYFATSDVD 180
>gi|15601905|ref|NP_244977.1| PfhR [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720243|gb|AAK02124.1| PfhR [Pasteurella multocida subsp. multocida str. Pm70]
Length = 727
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI-----FAGYNVEDSCIMYGVEGDVRYTVPVLADN 109
G Y +A + S G+ A+ G + F G + ++G+EG +++ +
Sbjct: 595 GTYL--NAGFAYSKGKTANKQPQGRLDPLTGFVGLGYQQPMDVWGIEGKLKFAAKKKTKD 652
Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLY 135
+ + G G GY V D Y
Sbjct: 653 LLANQGFEGLP----GYAVVDLTAYY 674
>gi|16759301|ref|NP_454918.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29142926|ref|NP_806268.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213163732|ref|ZP_03349442.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213421110|ref|ZP_03354176.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
gi|213425134|ref|ZP_03357884.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213585681|ref|ZP_03367507.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213621844|ref|ZP_03374627.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213646043|ref|ZP_03376096.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|213852831|ref|ZP_03382363.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289826866|ref|ZP_06545776.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25513091|pir||AH0541 probable outer membrane adhesin STY0351 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501592|emb|CAD08776.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138558|gb|AAO70128.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 239
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|197335419|ref|YP_002157050.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197316909|gb|ACH66356.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 206
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 38/203 (18%)
Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGL-----------SALYNGSFGEEAHHNAGGSIFA 82
T+A + + +G YAG+ S YN + ++
Sbjct: 11 STASFYTLANDNMDISQPKISGFYAGVGFGSFGYSEEDSWGYNNNPISAEADGNSTKVYL 70
Query: 83 GYNVEDSCIMYGVEGDV-RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141
GY + G+EG Y +S+ SL GY + + + VG
Sbjct: 71 GYQF---NKIVGIEGTYTDYGTAKAKVGNYSMKPSSISLAANLGYTFKNGIRPFGLVGMS 127
Query: 142 VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR-----------ASKYSKV 190
++ + A G GVE + + +++R Y
Sbjct: 128 SLDLNQSEELLTDDSGAA-FKFGFGVEY---TPKALGGVQFRAAYEMDMYAVEYLDYQSG 183
Query: 191 EGF--------YNTISLGVGMKF 205
G +++ +G KF
Sbjct: 184 AGLTTETNLYALDSLYVGASYKF 206
>gi|304411584|ref|ZP_07393197.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|307306640|ref|ZP_07586382.1| OmpA domain-containing protein [Shewanella baltica BA175]
gi|304350111|gb|EFM14516.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|306910608|gb|EFN41037.1| OmpA domain-containing protein [Shewanella baltica BA175]
Length = 192
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 21/166 (12%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
NG Y G + Y G++ + I GY + G G V + + +
Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
G +L + Y + D + LYA G G +G G AG GV
Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFAGAGV-A 146
Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205
+++ + EY + + SLGV +F
Sbjct: 147 FKVTDRFLINAEYTWYDAGITIENVSNGADTDTDFKQASLGVEYRF 192
>gi|224582147|ref|YP_002635945.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224466674|gb|ACN44504.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 239
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQI 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|238913304|ref|ZP_04657141.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 239
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|322614599|gb|EFY11528.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322620118|gb|EFY16990.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322623412|gb|EFY20251.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629290|gb|EFY26069.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632010|gb|EFY28764.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637252|gb|EFY33954.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642449|gb|EFY39051.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646297|gb|EFY42811.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652434|gb|EFY48788.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653404|gb|EFY49737.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660448|gb|EFY56684.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664600|gb|EFY60793.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669347|gb|EFY65497.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670893|gb|EFY67026.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678868|gb|EFY74923.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681897|gb|EFY77922.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322688023|gb|EFY83989.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323194378|gb|EFZ79573.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197793|gb|EFZ82925.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203411|gb|EFZ88436.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206844|gb|EFZ91797.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210387|gb|EFZ95279.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214629|gb|EFZ99380.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223185|gb|EGA07528.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224844|gb|EGA09107.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230048|gb|EGA14168.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233786|gb|EGA17875.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238520|gb|EGA22578.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244208|gb|EGA28217.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246368|gb|EGA30351.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251994|gb|EGA35857.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257991|gb|EGA41670.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259912|gb|EGA43543.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265074|gb|EGA48573.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272637|gb|EGA56044.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 239
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|194444662|ref|YP_002039548.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194403325|gb|ACF63547.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 239
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|126735844|ref|ZP_01751589.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126715031|gb|EBA11897.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 200
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 24/108 (22%)
Query: 83 GYNV-EDSCIMYGVEGDVRYTVPVLA---------------DNIHSLHGIGGSLRIRGGY 126
GY V +++ VE D+ + + + + R GY
Sbjct: 48 GYEVARTGNVVFAVEADISFGNYDSGQVLVDTTPCITNAPDEACRAEVSAIATGRALIGY 107
Query: 127 EVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGV 167
+ + Y T G +A+ G + G TAG+G+
Sbjct: 108 K-QGAFTPYITGGVAIARASGHADTGACGGSDCDFDEALTGWTAGLGI 154
>gi|326476400|gb|EGE00410.1| Neurofilament heavy polypeptide [Trichophyton tonsurans CBS 112818]
Length = 1856
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 37/131 (28%), Gaps = 26/131 (19%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
P + + V + P G+S FG E + G F G+ G E D
Sbjct: 359 PAPSAFQDVSLDDGAAAPQIGMS------FGGEDTKGSTGFSFGGWG---KDWNTGGELD 409
Query: 99 VRYTVPVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150
+ D ++ G GS G+E + G D G
Sbjct: 410 LGANGDTKDDGLNPWGGTSKKNKKNSTGSDAFDFGFESN---------GLDGKNADPAGD 460
Query: 151 AGEITPIAIGG 161
AG +
Sbjct: 461 AGADKEPEVSW 471
>gi|319897366|ref|YP_004135562.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
gi|317432871|emb|CBY81237.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
Length = 348
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 30/182 (16%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYN-VEDSCIMYGVE---GDVRY 101
+ G AG ++ +NG + H+AG +F GY + + + VE D
Sbjct: 29 YAGVKAGQASFHNGVRAQARKHDAGYHRNSFTYGVFGGYQILNQNNLGLAVELGYDDFGR 88
Query: 102 TVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEITP 156
+ H G+ L ++G YEV + L +Y G + + Y +
Sbjct: 89 AKGRREGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYSVDDHKDGHR 148
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYN------------TISLGVGM 203
+ G VG E L E L RLEY+ ++ K N +I+ G+
Sbjct: 149 VRASGLFAVGAEYAVLPE-LAVRLEYQWLTRVGKYRPQDNPNSAINYTPWIGSINAGISY 207
Query: 204 KF 205
+F
Sbjct: 208 RF 209
>gi|330830631|ref|YP_004393583.1| major outer membrane protein ompAII [Aeromonas veronii B565]
gi|328805767|gb|AEB50966.1| Major outer membrane protein ompAII [Aeromonas veronii B565]
Length = 333
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 44/141 (31%), Gaps = 21/141 (14%)
Query: 52 DFNGPYAGLSALY-------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104
D+ Y G+ A + + + S+F GYN D Y E Y
Sbjct: 26 DW---YTGVGAGWAYAHNLDDVQGLDTDKDATALSLFGGYNFND---YYAAELGYLYAGK 79
Query: 105 VLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163
D G S R + D ++A G G + T A
Sbjct: 80 AGVDGADFKTQGATLSGIARL--PLGDIFSVFAEGGAYFNHVNGNGNSDNGTAPL----A 133
Query: 164 GVGVEVGGLSESLVARLEYRA 184
G+G+ LS+ + + YR
Sbjct: 134 GLGL-TAKLSDLIDVQARYRY 153
>gi|323160774|gb|EFZ46709.1| ompA-like transmembrane domain protein [Escherichia coli E128010]
Length = 251
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 71/231 (30%), Gaps = 44/231 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59
M ++ + VS+LA+A SAQA AD + + ++ R D
Sbjct: 1 MIEMKKVIAVSALAMAGVFSAQALADENKTGFYVTGKAGASVVAQTDQRFRQDL------ 54
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110
+Y G++ G + GY+ + + YG D YT+ +
Sbjct: 55 GEDVYKYKGGDKNDTVFGEGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPM 114
Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160
+ R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GNGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYTDTSRNESGE 174
Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 ISDISELHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKFSLSY 224
>gi|152999073|ref|YP_001364754.1| OmpA domain-containing protein [Shewanella baltica OS185]
gi|151363691|gb|ABS06691.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS185]
Length = 192
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 21/166 (12%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
NG Y G + Y G++ + I GY + G G V + + +
Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
G +L + Y + D + LYA G G +G G AG GV
Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFAGAGV-A 146
Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205
+++ + EY + + SLGV +F
Sbjct: 147 FKVTDRFLINAEYTWYDAGITVENVSNGADTDTDFKQASLGVEYRF 192
>gi|56414566|ref|YP_151641.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|168238589|ref|ZP_02663647.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194734644|ref|YP_002113331.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197363496|ref|YP_002143133.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|204927007|ref|ZP_03218209.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|56128823|gb|AAV78329.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|194710146|gb|ACF89367.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197094973|emb|CAR60510.1| possible outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197288560|gb|EDY27937.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|204323672|gb|EDZ08867.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
Length = 239
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|189475078|gb|ACE00213.1| OmpA [Vibrio alginolyticus]
Length = 320
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 52/163 (31%), Gaps = 32/163 (19%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + ++ F GY + + VE
Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEAGFD------NIGD 73
Query: 111 HSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+ G + + +++ + LY VG G+ +G
Sbjct: 74 FNQTSFSGHVEAITLAPKFSLPITEDIALYGKVGGAY-----VMFDGKDDYSYLG---AA 125
Query: 166 GVEVGGLSESLVARLEYR-ASKYSK--VEGFYNTISLGVGMKF 205
G+E LS+++ AR EY+ + S NT +LGV KF
Sbjct: 126 GLEFN-LSQNVTARAEYQTLTDISNDVTRATGNTATLGVSFKF 167
>gi|160873670|ref|YP_001552986.1| OmpA domain-containing protein [Shewanella baltica OS195]
gi|160859192|gb|ABX47726.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS195]
gi|315265901|gb|ADT92754.1| OmpA domain-containing protein [Shewanella baltica OS678]
Length = 192
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 21/166 (12%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
NG Y G + Y G++ + I GY + G G V + + +
Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
G +L + Y + D + LYA G G +G G AG GV
Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFAGAGV-A 146
Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205
+++ + EY + + SLGV +F
Sbjct: 147 FKVTDRFLINAEYTWYDAGITVENVSSGADTDTDFKQASLGVEYRF 192
>gi|226344125|gb|ACO48685.1| OmpA [Escherichia coli]
gi|226344127|gb|ACO48686.1| OmpA [Escherichia coli]
gi|226344129|gb|ACO48687.1| OmpA [Escherichia coli]
gi|226344131|gb|ACO48688.1| OmpA [Escherichia coli]
gi|226344133|gb|ACO48689.1| OmpA [Escherichia coli]
gi|226344135|gb|ACO48690.1| OmpA [Escherichia coli]
gi|226344137|gb|ACO48691.1| OmpA [Escherichia coli]
gi|226344139|gb|ACO48692.1| OmpA [Escherichia coli]
gi|226344141|gb|ACO48693.1| OmpA [Escherichia coli]
gi|226344143|gb|ACO48694.1| OmpA [Escherichia coli]
gi|226344145|gb|ACO48695.1| OmpA [Escherichia coli]
gi|226344147|gb|ACO48696.1| OmpA [Escherichia coli]
gi|226344149|gb|ACO48697.1| OmpA [Escherichia coli]
gi|226344151|gb|ACO48698.1| OmpA [Escherichia coli]
gi|226344153|gb|ACO48699.1| OmpA [Escherichia coli]
gi|226344155|gb|ACO48700.1| OmpA [Escherichia coli]
gi|226344157|gb|ACO48701.1| OmpA [Escherichia coli]
gi|226344159|gb|ACO48702.1| OmpA [Escherichia coli]
gi|226344161|gb|ACO48703.1| OmpA [Escherichia coli]
gi|226344163|gb|ACO48704.1| OmpA [Escherichia coli]
gi|226344165|gb|ACO48705.1| OmpA [Escherichia coli]
gi|226344167|gb|ACO48706.1| OmpA [Escherichia coli]
gi|226344169|gb|ACO48707.1| OmpA [Escherichia coli]
gi|226344171|gb|ACO48708.1| OmpA [Escherichia coli]
gi|226344173|gb|ACO48709.1| OmpA [Escherichia coli]
gi|226344177|gb|ACO48711.1| OmpA [Escherichia coli]
gi|226344179|gb|ACO48712.1| OmpA [Escherichia coli]
gi|226344181|gb|ACO48713.1| OmpA [Escherichia coli]
gi|226344183|gb|ACO48714.1| OmpA [Escherichia coli]
gi|226344185|gb|ACO48715.1| OmpA [Escherichia coli]
gi|226344187|gb|ACO48716.1| OmpA [Escherichia coli]
gi|226344189|gb|ACO48717.1| OmpA [Escherichia coli]
Length = 153
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 16/132 (12%)
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHG 115
+ + G + G F GY V G E + Y + + + G
Sbjct: 3 GFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGSVENGAYKAQG 57
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSE 174
+ L + GY ++D L +Y +G V + G+ + GVE ++
Sbjct: 58 VQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEY-AITP 114
Query: 175 SLVARLEYRASK 186
+ RLEY+ +
Sbjct: 115 EIATRLEYQWTN 126
>gi|254230148|ref|ZP_04923543.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262394952|ref|YP_003286806.1| outer membrane protein A [Vibrio sp. Ex25]
gi|151937341|gb|EDN56204.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262338546|gb|ACY52341.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 320
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 32/163 (19%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + ++ F GY + + VE
Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEAGFD------NIGD 73
Query: 111 HSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+ GG + + +++ + LY VG G+ +G
Sbjct: 74 FNQTSFGGHVEAITLAPKFSLPITEDIALYGKVGGAY-----VMFDGKDDYSYLG---AA 125
Query: 166 GVEVGGLSESLVARLEYR-ASKYSK--VEGFYNTISLGVGMKF 205
G+E LS+++ AR EY+ + S NT +LGV KF
Sbjct: 126 GLEFN-LSQNVTARAEYQTLTDISNDVTRATGNTATLGVSFKF 167
>gi|113475637|ref|YP_721698.1| peptidase-like protein [Trichodesmium erythraeum IMS101]
gi|110166685|gb|ABG51225.1| peptidase-like [Trichodesmium erythraeum IMS101]
Length = 1594
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%)
Query: 52 DFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG----YNVEDSCIMYGVEGDVRYTVPVLA 107
D++G ++ S + G G Y + + I+YG +GD +
Sbjct: 8 DWSG--TPGDNVWPLSEDNSCNDTLNGR--GGDDKLYASQGNDILYGGDGDDKLYGQQGN 63
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGTAG 164
D ++ G L GG + LY G + +T G G G
Sbjct: 64 DKLYGEQG-NDRLYGNGGRDR-----LYGNGGCDRLHGGRGKDTLNGGAGNDTLNG---G 114
Query: 165 VGVE 168
G +
Sbjct: 115 AGKD 118
>gi|332830053|gb|EGK02681.1| hypothetical protein HMPREF9455_00931 [Dysgonomonas gadei ATCC
BAA-286]
Length = 156
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 15/135 (11%)
Query: 80 IFAGYNVEDSCIMYGVEGDVRYTVP---------VLADNIHSLHGIGGSLRIRGGYEVSD 130
+ AGY + GVEG T +N + ++ + +
Sbjct: 28 VKAGYQTDYERFGLGVEGRYSITNNLRLAPDFTFYFPNNHLTGLDFNANIHYV--FPIQS 85
Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
LY G + + + G G G + + +E++ S + V
Sbjct: 86 GFSLYPLAGVAMVNNRLSFGGYSDSSTDFGVNIGAGGSFD-IGNNGYLNVEFKYS-FQDV 143
Query: 191 EGFYNTISLGVGMKF 205
+ I LG G++F
Sbjct: 144 DNA--NIMLGYGVRF 156
>gi|297746442|emb|CBI16498.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIA----TNRYVPIRHDFNGP 56
M+ + V+S A + A++ V A RG T P ++GP
Sbjct: 1 MRSSWADSVVNSAAENVAAGSSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYSGP 60
Query: 57 Y-AGLSALYNGSFGEEAHHNA------GGSIFAGYNVEDSCIMYGVEGDVR-YTVPVLAD 108
A + Y+G+ +++ G G+N + G E +V + V +
Sbjct: 61 SSANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGGWNNKSGGWDRGREREVNPFGDDVDTE 120
Query: 109 NIHSLHGIGG 118
+ S G
Sbjct: 121 KVFSEQENTG 130
>gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703]
Length = 363
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 69/221 (31%), Gaps = 34/221 (15%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+K+ ++ALA F + A P + G + ++ G G
Sbjct: 5 RKMKKTAIALAVALAGFATVAQAAPKDNTWYTGGKLG---------WSQYQNTG--TGGI 53
Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIG 117
G+ G G F GY + G E + Y P D +
Sbjct: 54 YGDQGNDGPTHKDQLGAGAFLGY---QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQ 108
Query: 118 G-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV------GVEVG 170
G L + Y ++ L LY +G V + + A GV G E
Sbjct: 109 GVQLAAKLSYPIAQDLDLYTRLGGMVWRADSSAFDATTGARANNHDTGVSPLVALGAEY- 167
Query: 171 GLSESLVARLEYRA-SKYSKVEG-----FYNTISLGVGMKF 205
+++ R+EY+ S +S+GV +F
Sbjct: 168 AWTKNWATRMEYQWVSNIGDKATVGARPDNGMLSVGVSYRF 208
>gi|300815558|ref|ZP_07095782.1| porin protein, opacity family [Escherichia coli MS 107-1]
gi|300531487|gb|EFK52549.1| porin protein, opacity family [Escherichia coli MS 107-1]
Length = 249
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 46/226 (20%)
Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGPYAG 59
+ + VS+LA+A SAQA AD + + ++ + R++ + Y G
Sbjct: 8 MKKIMAVSALAVAGMFSAQALADGNKTGFYVTGKAGTSVVSLSDQRFIDGEGVWADRYKG 67
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VPVLA 107
G++ G I AGY+ + + D +Y
Sbjct: 68 ---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSH 118
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA-------------- 151
D++ S + +L + Y+ + + + G A+ ++
Sbjct: 119 DDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRE 177
Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ + G GV ++ + L YR Y
Sbjct: 178 SLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSY 222
>gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 361
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 70/220 (31%), Gaps = 35/220 (15%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++ALASF + AQAA + GG+ V + G Y
Sbjct: 1 MKKTAIAVAVALASFATIAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GN 47
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHSLHGI 116
Y G G F GY + G E G ++Y +
Sbjct: 48 GYTGVNNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSTSNVADSASFKA 104
Query: 117 GG-SLRIRGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
G L + Y V L +Y +G + G + A +GVE
Sbjct: 105 QGIQLAAKLSYPVLPDLDVYTRLGGMVWRADSHAAIGGGDINNDDTGVSPLAAIGVEY-A 163
Query: 172 LSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
+ ++ R++Y+ V + +S+G+ +F
Sbjct: 164 IDKNWATRVDYQWVSNIGDAGTVGARPDNMLMSVGLSYRF 203
>gi|91225860|ref|ZP_01260829.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269965437|ref|ZP_06179556.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|91189510|gb|EAS75786.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269829916|gb|EEZ84146.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 320
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 32/163 (19%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + ++ F GY + + VE
Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEAGFD------NIGD 73
Query: 111 HSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+ GG + + +++ + LY VG G+ +G
Sbjct: 74 FNQTSFGGHVEAITLAPKFSLPITEDIALYGKVGGAY-----VMFDGKDDYSYLG---AA 125
Query: 166 GVEVGGLSESLVARLEYR-ASKYSK--VEGFYNTISLGVGMKF 205
G+E LS+++ AR EY+ + S NT +LGV KF
Sbjct: 126 GLEFN-LSQNVTARAEYQTLTDISNDVTRATGNTATLGVSFKF 167
>gi|212703520|ref|ZP_03311648.1| hypothetical protein DESPIG_01565 [Desulfovibrio piger ATCC 29098]
gi|212673020|gb|EEB33503.1| hypothetical protein DESPIG_01565 [Desulfovibrio piger ATCC 29098]
Length = 218
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 23/156 (14%)
Query: 66 GSFGEEAHHNAGGSIFAGYNVEDSCIM-------YGVEGDVRYTVPVLADNIHSLHGIGG 118
G E + GG++ AGY+ ++ Y + G+ + ++
Sbjct: 49 GGVDEYSQFTLGGALAAGYDFWPQYLVPVRVELEYALRGNSEKSWGSNWGSVDCTWN-SS 107
Query: 119 SLRIRGGYEVSDS--LLLYATVGPDVAQKYE--------TGKAGEITPIAIGGTAGVGVE 168
+L Y+ + + Y G ++ Y + + + + G GV
Sbjct: 108 TLFANLYYDFRNDSAFVPYIGAGIGMSFNYLGFDLHRNGSAVSRDESTTNFAWNVGAGVA 167
Query: 169 VGGLSESLVARLEYRASKYSKVEGF----YNTISLG 200
++++L YR E + I +G
Sbjct: 168 YN-VNDALYIDAAYRYVDLGYTEASGALNGDQIKVG 202
>gi|14278420|pdb|1G90|A Chain A, Nmr Solution Structure Of Outer Membrane Protein A
Transmembrane Domain: 10 Conformers
Length = 176
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 13/148 (8%)
Query: 48 PIRHDF-NGPYAGLSALYNGSF----GEEAHHNAGGSIFAGYNVEDSCIMYGVEG--DVR 100
P + + G G S ++ F G + G F GY V G E D
Sbjct: 2 PKDNTWYTGAKLGFSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFEMGYDFL 58
Query: 101 YTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYAT-VGPDVAQKYETGKAGEITPIA 158
+P + + G L + GY ++D L +Y G ++ G+
Sbjct: 59 GRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVFRADTKSNVYGKNHDTG 118
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASK 186
+ GVE ++ + RLEY+ +
Sbjct: 119 VSPVFAGGVEY-AITPEIATRLEYQFTN 145
>gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 361
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 68/218 (31%), Gaps = 34/218 (15%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
A+ V+ + AQAA + GG+ V + G Y Y
Sbjct: 3 KTAIAVAVALASFATVAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GNGY 49
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHSLHGIGG 118
G G F GY + G E G ++Y + G
Sbjct: 50 TGINNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSTANAADSASFKAQG 106
Query: 119 -SLRIRGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173
L + Y V L +Y+ +G + G + A VGVE +
Sbjct: 107 IQLAAKLSYPVLPDLDVYSRLGGMVWRADSHAAIGGGDINNDDTGVSPLAAVGVEY-AID 165
Query: 174 ESLVARLEYRAS----KYSKVEGFYNTI--SLGVGMKF 205
++ AR++Y+ V + + S+G+ +F
Sbjct: 166 KNWAARVDYQWVSNIGDAGTVGARPDNLLMSVGLSYRF 203
>gi|323971797|gb|EGB67023.1| heat resistant agglutinin 1 [Escherichia coli TA007]
Length = 242
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 71/226 (31%), Gaps = 46/226 (20%)
Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGPYAG 59
+ + VS+LA+A SAQA AD + + ++ + R++ ++ Y G
Sbjct: 1 MKKIMAVSALAVAGMFSAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADRYKG 60
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VPVLA 107
G++ G I AGY+ + + D +Y
Sbjct: 61 ---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSH 111
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA-------------- 151
D++ S + +L + Y+ + + + G A+ ++
Sbjct: 112 DDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRE 170
Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ + G GV ++ + L YR Y
Sbjct: 171 SLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSY 215
>gi|299533012|ref|ZP_07046399.1| Opacity protein-like surface antigen [Comamonas testosteroni S44]
gi|298719236|gb|EFI60206.1| Opacity protein-like surface antigen [Comamonas testosteroni S44]
Length = 223
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 25/148 (16%)
Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119
G+E++ GGS+ GY + + + VE + YT+P + S
Sbjct: 54 GDESNTATGGSLALGYQLPSN---WRVEAE--YTLPKNNEFTSGSTRFPTSFNHHQIRSQ 108
Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169
+ + ++ LY G +A+ +G G T + + G GV
Sbjct: 109 RLMVNAYKDFPLNSQFSLYGMAGLGLARLESSGWQGNPGRQYISDTQNNLAYSVGFGVSY 168
Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTI 197
+ + L L +R K + N
Sbjct: 169 SPV-QKLSIDLGWRYVDMGKAKSGANNF 195
>gi|319776591|ref|YP_004139079.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
gi|317451182|emb|CBY87415.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
Length = 348
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 30/182 (16%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYN-VEDSCIMYGVE---GDVRY 101
+ G AG ++ +NG + H+AG +F GY + + + VE D
Sbjct: 29 YAGVKAGQASFHNGVRAQARKHDAGYHRNSFTYGVFGGYQILNQNNLGLAVELGYDDFGR 88
Query: 102 TVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEITP 156
+ H G+ L ++G YEV + L +Y G + + Y +
Sbjct: 89 AKGRREGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYPVDDHKDGHR 148
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYN------------TISLGVGM 203
+ G VG E L E L RLEY+ ++ K N +I+ G+
Sbjct: 149 VRASGLFAVGAEYAVLPE-LAVRLEYQWLTRVGKYRPQDNPNSAINYTPWIGSINAGISY 207
Query: 204 KF 205
+F
Sbjct: 208 RF 209
>gi|217971759|ref|YP_002356510.1| OmpA domain-containing protein transmembrane region-containing
protein [Shewanella baltica OS223]
gi|217496894|gb|ACK45087.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS223]
Length = 192
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 53/166 (31%), Gaps = 21/166 (12%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
NG Y G + Y G++ + I GY + G G V + + +
Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
G +L + Y + D + LYA G G +G G G GV
Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFVGAGV-A 146
Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205
+++ + EY + + SLGV +F
Sbjct: 147 FKVTDRFLINAEYTWYDAGITVENVSNGADTDTDFKQASLGVEYRF 192
>gi|88861307|ref|ZP_01135938.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
gi|88816686|gb|EAR26510.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
Length = 358
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 58/187 (31%), Gaps = 28/187 (14%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNG-------SFGEEAHHNAGGSIFAGYNVEDSCIM 92
+ +FN Y G S + S+F GY +
Sbjct: 26 AAHSEEAQADNFNFNNWYVGGEFGRKRQDDLCKKSLSSCDSSDNAWSVFFGYEFSKHWAL 85
Query: 93 YGVEGDVR-YTVPVLADNIHS-------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
G D+ Y+ L + + + G R+ +++ L+ +G
Sbjct: 86 EGGYTDLGEYSTTGLVNGLTNHAVTSMTGLEFAGVFRM----PLTEQAGLFTKLGAMYYD 141
Query: 145 KYETGKAGEITPIAIGGTA--GVGVEVGGLSESLVARLEYRA-SKYSKVE---GFYNTIS 198
E + G +A G+G+ +++L R+EY E + +
Sbjct: 142 GEEKNSIAKFDDK--GWSALFGLGLSYD-FTQNLQGRVEYNFLHDLGDSEFAGDHGHLTT 198
Query: 199 LGVGMKF 205
LG+ +F
Sbjct: 199 LGLAYRF 205
>gi|329124105|ref|ZP_08252652.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
gi|327467530|gb|EGF13028.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
Length = 348
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 30/182 (16%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYN-VEDSCIMYGVE---GDVRY 101
+ G AG ++ +NG + H+AG +F GY + + + VE D
Sbjct: 29 YAGVKAGQASFHNGVRAKAREHDAGYHRNSFTYGVFGGYQILNQNNLGLAVELGYDDFGR 88
Query: 102 TVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEITP 156
+ H G+ L ++G YEV + L +Y G + + Y +
Sbjct: 89 AKGRKEGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYPVDNHKDGHR 148
Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYN------------TISLGVGM 203
+ G VG E L E L RLEY+ ++ K N +I+ G+
Sbjct: 149 VRASGLFAVGAEYAVLPE-LAVRLEYQWLTRVGKYRPQDNPNSAINYTPWIGSINAGISY 207
Query: 204 KF 205
+F
Sbjct: 208 RF 209
>gi|226344175|gb|ACO48710.1| OmpA [Escherichia coli]
Length = 153
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 16/132 (12%)
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHG 115
+ + G + G F GY V G E + Y + + + G
Sbjct: 3 GFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGSVKNGAYKAQG 57
Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSE 174
+ L + GY ++D L +Y +G V + G+ + GVE ++
Sbjct: 58 VQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEY-AITP 114
Query: 175 SLVARLEYRASK 186
+ RLEY+ +
Sbjct: 115 EIATRLEYQWTN 126
>gi|261377935|ref|ZP_05982508.1| surface protein A [Neisseria cinerea ATCC 14685]
gi|269145795|gb|EEZ72213.1| surface protein A [Neisseria cinerea ATCC 14685]
Length = 192
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 36/178 (20%)
Query: 55 GPYAGLSALYNG-----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109
G Y ++ G+ + + AGY+ D + V D YT +
Sbjct: 24 GFYVQGDLGHSTLKTSDEGGKVSSKGFSPRLSAGYDFGD----FRVAAD--YTHYKTRKD 77
Query: 110 IHSLHGIGGSLRIRG---------GYEVSDSLLLYATVGPDVAQKYETGKAGEI------ 154
+I+ ++++ + Y + +
Sbjct: 78 HEQGPSYTLDSKIKLQSVGVSAIYDFDLNSPVKPYVGARVGLNRFSYDDDDRREGYHATE 137
Query: 155 ----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205
T +G GVG + +++++ YR + + +G + +S GV +KF
Sbjct: 138 TFRKTKTGLGVMTGVGYD---ITQNVALDAGYRYNHWGNFDGIKVHTHEVSAGVRVKF 192
>gi|90418982|ref|ZP_01226893.1| putative outer surface protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337062|gb|EAS50767.1| putative outer surface protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 337
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 36/130 (27%), Gaps = 15/130 (11%)
Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+L V + + A+AAD + + P + Y
Sbjct: 7 RLLTTVALIGAVSSFSSFAKAADIIEEQPY----FPPPAPVIVEEVATGGW---YLRGDV 59
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
Y + +++ D + G++ Y L ++ + G
Sbjct: 60 GYVFKSKTDGYYDFYNIGNTSPEAYDDDWVRGIDSTEHYDEISLKNSANFSIG------- 112
Query: 123 RGGYEVSDSL 132
GY VSD
Sbjct: 113 -AGYRVSDHF 121
>gi|18307546|emb|CAD21163.1| putative invasin [Salmonella enterica IIIb 50:k:z]
Length = 239
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
GG + GY+ D + E D + + A + +
Sbjct: 60 NRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDITAFGEPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQ----------KYETGKAGEITPIAIGGTA 163
R + G Y+ +S Y + G +A+ Y+ + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLARVKLKNNTIPVGYDINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + +++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIAIDASYKYINAGKVSISKN 210
>gi|27366989|ref|NP_762516.1| outer membrane protein A [Vibrio vulnificus CMCP6]
gi|37676767|ref|NP_937163.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|27358557|gb|AAO07506.1| Outer membrane protein A precursor [Vibrio vulnificus CMCP6]
gi|37201310|dbj|BAC97133.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 357
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 28/174 (16%)
Query: 47 VPIRHDFNGPYAGLSALYNG-----SFGEEAHHNAGG-SIFAGYNVEDS-----CIMYGV 95
++ Y G Y ++ G ++ GYN I
Sbjct: 20 ATANAAWSDLYFGGKIGYVNLDDACYVSSPCDDDSAGFGLYYGYNFSKHISAELGIDLLG 79
Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
E + ++ ++ + + +L + +++ L +A +G Y +
Sbjct: 80 EHETNFSNGYFSEAKLAAY----TLAPKFSLPLNEKLDAFAKIGAA----YMIYGDDKDL 131
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSK---VEGFYNTISLGVGMKF 205
T +G+E L+ES AR EY R S + N +G+ F
Sbjct: 132 VP----TGSLGLEY-ALTESFKARAEYQRYQDMSDDIVKDMDANFFGIGITYLF 180
>gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
Length = 358
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 59/194 (30%), Gaps = 38/194 (19%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86
+ P + + Y G ++ G+ G + G F GY
Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQDTGTGGIYGDLGNDGPTHKNQLGAGAFLGY-- 70
Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPD 141
+ G E + Y P D + G L + Y V+ L LY +G
Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDTRNGDFKAQGVQLAAKLSYPVAQDLDLYTRLGGL 127
Query: 142 VAQK------YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVE 191
V + E+G + +G E +++ R+EY+ V
Sbjct: 128 VWRADSSAFDAESGARSSNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKGTVG 186
Query: 192 GFYNTISLGVGMKF 205
+ L VG+ +
Sbjct: 187 ARPDNGMLSVGVSY 200
>gi|323143404|ref|ZP_08078089.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
gi|322416809|gb|EFY07458.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
Length = 329
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 16/138 (11%)
Query: 56 PYAGLSALY----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G+ + N + +A G I+AGYN+ +E Y A ++
Sbjct: 28 AYVGVRGGWAHMDNVDWASADDKDAVGYGIYAGYNLTS---WAAIEAGYNYFDGFSAKDV 84
Query: 111 HSLHGI---GGSLRIRGGYEV-SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
H G +R + + D +Y G A G G
Sbjct: 85 EGSHDFDVHGPEAALRLAFPLGPDGSDIYVRGGAFWATTKVEHGISNHEIAPF---VGAG 141
Query: 167 VEVGGLSESLVARLEYRA 184
V+ ++++ R+ Y
Sbjct: 142 VQY-AVTKNFGVRVGYDY 158
>gi|294671107|ref|ZP_06735962.1| hypothetical protein NEIELOOT_02815 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307215|gb|EFE48458.1| hypothetical protein NEIELOOT_02815 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 193
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 58/183 (31%), Gaps = 29/183 (15%)
Query: 47 VPIRHDFNGPYAGLSALYNG-----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101
V + D G Y ++ G+ + + AGY+ D + V D +
Sbjct: 16 VALADDNRGFYVQGDLGHSTIKTKDDGGKGSAKGFSPRLSAGYDFGD----FRVAADYIH 71
Query: 102 TVPVLADNIHSLHGIGGSLRIRG-------GYEVSDSLLLYATVGPDVAQKYETGK---- 150
+ L+ ++ + ++++ + Y + + +
Sbjct: 72 YKTLKEHKRDPLYTFDAKIKFQSFGVSAIYDFDLNSPVKPYVGARLGLNRISYSDDFRGT 131
Query: 151 -----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF---YNTISLGVG 202
G GV +++++ YR + + K +G + +S GV
Sbjct: 132 TGYHETESFRKTKAGVGVMAGVGYD-ITQNVALDAGYRYNHWGKFDGLKVHSHEVSAGVR 190
Query: 203 MKF 205
+KF
Sbjct: 191 VKF 193
>gi|261856194|ref|YP_003263477.1| hypothetical protein Hneap_1600 [Halothiobacillus neapolitanus c2]
gi|261836663|gb|ACX96430.1| conserved hypothetical protein [Halothiobacillus neapolitanus c2]
Length = 241
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 44/134 (32%), Gaps = 16/134 (11%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADP----VRRAHHGGRGVVPTIATNRYVPIRHDF---- 53
+ L L ++L L +A AD + A + + ++ F
Sbjct: 4 KILTLLTVATALNLPVISAAVQADTFTGNINVASKYILRGITNSPEDDNAALQGGFDYSL 63
Query: 54 -NGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112
NG Y G G + + GYN YGV G V+Y NI +
Sbjct: 64 DNGLYVGYWGSSLGYSDPGKSNGFENDFYGGYNGSIGDFHYGV-GVVQYAYV----NISN 118
Query: 113 LHGIGGSLRIRGGY 126
+GI G GY
Sbjct: 119 SNGIEGY--GSVGY 130
>gi|320158865|ref|YP_004191243.1| outer membrane protein A [Vibrio vulnificus MO6-24/O]
gi|319934177|gb|ADV89040.1| outer membrane protein A precursor [Vibrio vulnificus MO6-24/O]
Length = 357
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 28/174 (16%)
Query: 47 VPIRHDFNGPYAGLSALYNG-----SFGEEAHHNAGG-SIFAGYNVEDS-----CIMYGV 95
++ Y G Y ++ G ++ GYN I
Sbjct: 20 ATANAAWSDLYFGGKIGYVNLDDACYVSSPCDDDSAGFGLYYGYNFSKHISAELGIDLLG 79
Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155
E + ++ ++ + + +L + +++ L +A +G Y +
Sbjct: 80 EHETNFSNGYFSEAKLAAY----TLAPKFSLPLNEKLDAFAKIGAA----YMIYGDDKDL 131
Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSK---VEGFYNTISLGVGMKF 205
T +G+E L+ES AR EY R S + N +G+ F
Sbjct: 132 VP----TGSLGLEY-ALTESFKARAEYQRYQDMSDDIVKDMDANFFGIGITYLF 180
>gi|332878582|ref|ZP_08446302.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683483|gb|EGJ56360.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 290
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138
S+ GY + + + G + T ++ +G G ++RGGY + L +
Sbjct: 25 SLSGGYGFQSNQKVVGRDA----TNIAAVSDLKGSYGEGYQAQLRGGYFFTKRLGAELAL 80
Query: 139 GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG-LSESLVARL 180
G T K + A G G + ++++L R
Sbjct: 81 GYLHGGDIATNKNQILDMTAHGRAFGASLSAVFNITDNLYVRA 123
>gi|160899400|ref|YP_001564982.1| opacity protein and related surface antigens-like protein [Delftia
acidovorans SPH-1]
gi|160364984|gb|ABX36597.1| Opacity protein and related surface antigens-like protein [Delftia
acidovorans SPH-1]
Length = 268
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 61/207 (29%), Gaps = 37/207 (17%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70
++L L + SA AAD A + G G+
Sbjct: 53 TALILTASGSALAADNFYGAVRINSANYKAHDMDSSARPG-------LGQFV-----PGD 100
Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS----------- 119
++ GGS+ GY + + +E + YT+P + S
Sbjct: 101 DSRRATGGSLALGYQLPSD---WRLEAE--YTLPRSNEFTSGSTRFPTSFNHHSIRSQRL 155
Query: 120 -LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEVGG 171
+ + ++ +Y T G +A +G G + + G GV
Sbjct: 156 MINAYKDFPLNAQFSVYGTAGLGLAHLQSSGWQGNPNRQYFSDSQNNLAYALGFGVSYSP 215
Query: 172 LSESLVARLEYRASKYSKVEGFYNTIS 198
+ + + L YR K N +
Sbjct: 216 I-QKVSIDLGYRYVGMGKTHSGANNFT 241
>gi|222054709|ref|YP_002537071.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563998|gb|ACM19970.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 474
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 11/127 (8%)
Query: 59 GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLHGI 116
G+ Y + + GYN +GVEG Y T AD + +
Sbjct: 36 GIIGGYTFDGRQHIETRPVYGVRGGYNFTKH---WGVEGLFDYARTESTRADQDINFYRY 92
Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176
GG + + + + L+ Y G V + ++ A G L++ L
Sbjct: 93 GGEVLLHVFPD--NKLVPYLAAGY-VGLTRDPEGQHTVSKGAFDYGIGA---KYFLTDDL 146
Query: 177 VARLEYR 183
R ++R
Sbjct: 147 ALRADFR 153
>gi|218260204|ref|ZP_03475597.1| hypothetical protein PRABACTJOHN_01258 [Parabacteroides johnsonii
DSM 18315]
gi|218224691|gb|EEC97341.1| hypothetical protein PRABACTJOHN_01258 [Parabacteroides johnsonii
DSM 18315]
Length = 172
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 19/154 (12%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRY------------TVPVL 106
L+ G++ + + GYN D G+ D RY T V
Sbjct: 22 LTLFSIGAYAQTQQGQSSFGFNLGYNFNDIGNATIGI--DYRYCVTDAFRLTPSITHFVK 79
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166
D +++ + +++S+ Y G ++ + + G G+G
Sbjct: 80 NDGLNA---WAIDMNAHYVFKLSEMFGFYPLAGLSLSFWKASVGNFSVNETRFGANIGLG 136
Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200
EV ++ + LE + + ++ + +G
Sbjct: 137 GEVYA-TDRISVGLEAKYNIIKDLDAAALAVRVG 169
>gi|260172756|ref|ZP_05759168.1| hypothetical protein BacD2_12886 [Bacteroides sp. D2]
gi|315921044|ref|ZP_07917284.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694919|gb|EFS31754.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 1090
Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%)
Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100
+ + + G Y L A + FG S G+ + + M G +R
Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651
Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
+ +N + + Y + ++++ + +K + A
Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIEGEGTKGLVRKKLSNDKLHWESTA-- 702
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
T +G++ G + L ++Y +KY+ ++ + L +G+
Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743
>gi|168232259|ref|ZP_02657317.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194470699|ref|ZP_03076683.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194457063|gb|EDX45902.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205333400|gb|EDZ20164.1| putative outer membrane adhesin [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 239
Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELGTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210
>gi|88798412|ref|ZP_01113997.1| OmpA/MotB [Reinekea sp. MED297]
gi|88778852|gb|EAR10042.1| OmpA/MotB [Reinekea sp. MED297]
Length = 373
Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 58/199 (29%), Gaps = 28/199 (14%)
Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY- 64
+G++S+ + S A V + +G Y G
Sbjct: 2 SLIGLTSVHTFAHDSIAAQMVVADPELVWKAWDAEEDGPLETADAQFKSGWYVGGGTGLT 61
Query: 65 -------NGSFGEEAHHNAGGSIFAGYNVEDS-----CIMYGVEGDVRYTVPVLADNIHS 112
+G F E + G +FAG+ +Y E + P +AD+I
Sbjct: 62 EVSPEGSSGGFYVEDDRDWGYKVFAGWRFMSHWGAEISYVYTGEAGLGNVNPAIADDIAD 121
Query: 113 LH--------GIGGSLRIRGGYEVSDSLLLYATVGP-DVAQKYETGKAGEITPIAIGGTA 163
LR L ++ VG + + +
Sbjct: 122 ATIRYQIPTMAASYYLRG-----AEHPLDVFGRVGLSAITNSVSDDRIPYEKQTPVQLNL 176
Query: 164 GVGVEVGGLSESLVARLEY 182
G+GVE ++E+ AR Y
Sbjct: 177 GIGVEWR-INETWFARAAY 194
>gi|254429747|ref|ZP_05043454.1| hypothetical protein ADG881_2977 [Alcanivorax sp. DG881]
gi|196195916|gb|EDX90875.1| hypothetical protein ADG881_2977 [Alcanivorax sp. DG881]
Length = 326
Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 67 SFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRG 124
+ + + G ++ + G++G++ Y V A+N H GG R
Sbjct: 161 GWDNQLGTDLIGGVYFINARRFQQFQWDSGLQGELGYAWGVDANNFHGTATAGGF--FRL 218
Query: 125 GYEVSDSLLL-YATVGPDVAQKYETGKAGEITPIAIG 160
G + + + YA +G + +G +G
Sbjct: 219 GRNLPRNFIPDYAGIGTAGSLVGLFDGSGFGWEAFVG 255
>gi|21673352|ref|NP_661417.1| tia invasion determinant-related protein [Chlorobium tepidum TLS]
gi|21646447|gb|AAM71759.1| tia invasion determinant-related protein [Chlorobium tepidum TLS]
Length = 219
Score = 36.6 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 66/217 (30%), Gaps = 25/217 (11%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K + +++ A +A ADP+ + GG ++ N
Sbjct: 1 MKKYAITSIAAAMLSAPAITA-TADPLYISLSGGLNLMSNSDAKVSDTETSIKNAVEYKR 59
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYG-------VEGDVRYTVPVLADNIHSL 113
G+FGE+ G I GY D + G E D + V A + +
Sbjct: 60 GYALEGAFGEKT-GVFRGEIAVGYQSSDVDKVLGSDIVEQLGEIDNYEDLTVTASALTVM 118
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVA--------QKYETGKAGEITPIAIGGTAGV 165
+ + Y++ L Y G A + G
Sbjct: 119 YNVYAD------YDMKGILSPYLMGGLGAAFVDMGTSFKVDGVEYDSSYDKTVFAWQLGA 172
Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202
G+ ++ ++ L YR K ++ N L G
Sbjct: 173 GL-GIKITNNVALDLGYRYFKTGDLD-LENKTKLSFG 207
>gi|326482405|gb|EGE06415.1| hypothetical protein TEQG_05419 [Trichophyton equinum CBS 127.97]
Length = 2219
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 37/131 (28%), Gaps = 26/131 (19%)
Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98
P + + V + P G+S FG E + G F G+ G E D
Sbjct: 359 PAPSAFQDVSLDDGAAAPQIGMS------FGGEDTKGSTGFSFGGWG---KDWNTGGELD 409
Query: 99 VRYTVPVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150
+ D ++ G GS G+E + G D G
Sbjct: 410 LGANGDTKDDGLNPWGGTSKKNKKNSTGSDAFDFGFESN---------GLDGKNADPAGD 460
Query: 151 AGEITPIAIGG 161
AG +
Sbjct: 461 AGADKEPEVSW 471
>gi|117625198|ref|YP_854245.1| tia invasion determinant [Escherichia coli APEC O1]
gi|218559962|ref|YP_002392875.1| Tia invasion determinant [Escherichia coli S88]
gi|218702439|ref|YP_002410068.1| Tia invasion determinant [Escherichia coli IAI39]
gi|218702831|ref|YP_002410460.1| Tia invasion determinant [Escherichia coli IAI39]
gi|300824790|ref|ZP_07104894.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7]
gi|70608343|gb|AAZ04415.1| Tia invasion determinant [Escherichia coli]
gi|115514322|gb|ABJ02397.1| Tia invasion determinant [Escherichia coli APEC O1]
gi|218366731|emb|CAR04490.1| Tia invasion determinant [Escherichia coli S88]
gi|218372425|emb|CAR20299.1| Tia invasion determinant [Escherichia coli IAI39]
gi|218372817|emb|CAR20696.1| Tia invasion determinant [Escherichia coli IAI39]
gi|300522697|gb|EFK43766.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7]
gi|315286986|gb|EFU46401.1| OmpA-like transmembrane domain protein [Escherichia coli MS 110-3]
Length = 251
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 44/231 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59
M ++ + VS+LA+A SAQA AD + + ++ T R DF
Sbjct: 1 MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDF------ 54
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110
+Y G++ G + GY+ + + YG D YT+ +
Sbjct: 55 GDDVYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPM 114
Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160
R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGE 174
Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 VSDISALHYSGYDNNFAWSIGAGVRYD-ITPDIALDLSYRYLDAGKSSLSY 224
>gi|290543553|ref|NP_001166524.1| cytokine receptor common subunit beta [Cavia porcellus]
gi|3882358|gb|AAC77520.1| interleukin-5 receptor beta chain [Cavia porcellus]
Length = 890
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 19 CSAQAADPVRRAHHGGRGVVP-TIATNRYVPIRHDFNGPYAG 59
+ A+D + + P DFNGPY G
Sbjct: 558 STPAASDLTQEQPPSVQPGPPVPQDQPGDQLATFDFNGPYLG 599
>gi|261213962|ref|ZP_05928243.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915569|gb|EEX82430.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 75
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 21/77 (27%), Gaps = 4/77 (5%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+ L V + SL LAS V+ V +NG Y G
Sbjct: 1 MECLEGTVNIKSLLLASTVVL----VAATGAKAADAVIEQEPAPVVVAPTFTWNGAYLGG 56
Query: 61 SALYNGSFGEEAHHNAG 77
Y + +
Sbjct: 57 QIGYGWGRSTLSDEDTS 73
>gi|149911546|ref|ZP_01900160.1| Outer membrane protein [Moritella sp. PE36]
gi|149805391|gb|EDM65401.1| Outer membrane protein [Moritella sp. PE36]
Length = 193
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 21/148 (14%)
Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAGGSIFAGYNVED 88
G + IA + V D +G Y G NG + + GY
Sbjct: 8 GALTAIALSVNVQANQDVSGFYLGAGVGTTNVDTDTNGYSSNSDTDGSTVKLLGGYQF-- 65
Query: 89 SCIMYGVEGDV----RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
+ +E T + SL GY + L +AT+G
Sbjct: 66 -NRIVAIEAQYTKYGDITPLSNFSKTYQWSPTTVSLAANLGYTFENGLRPFATIGLSSLD 124
Query: 145 KYETGKAGEITPIAIGGTA---GVGVEV 169
E+ K + + TA G G+E
Sbjct: 125 LDESIKTIDDSSA----TALRFGAGLEY 148
>gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305]
gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305]
Length = 372
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 54/203 (26%)
Query: 56 PYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111
YAG A + F + + GY + + + YGV G +
Sbjct: 26 FYAGAKAGWANFRDGFTQFESSQENPKLNNGYGINKNTVTYGVFGGYQILNQNNFGLAAE 85
Query: 112 SLHGIGGSLRI-------------------------RGGYEVSDSLLLYATVGPDVAQK- 145
+ G R + YEV +L +Y VG + +
Sbjct: 86 LGYDYFGRARGNTTFAGEDREKVAAKHTAHGAHLSLKPSYEVIPNLDVYGKVGVALIRND 145
Query: 146 -YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEG------ 192
+ + + T G GVE L E L AR+EY+ +K ++
Sbjct: 146 YFVQSTPVKGKRTKVHTLKPSLTLGAGVEYAILPE-LAARIEYQYVNKVGNLDKAARKAD 204
Query: 193 ----------FYNTISLGVGMKF 205
+++S G+ +F
Sbjct: 205 KQGTNYQFSPDLHSVSAGLSYRF 227
>gi|301020993|ref|ZP_07185044.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1]
gi|300398367|gb|EFJ81905.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1]
Length = 251
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 44/231 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59
M ++ + VS+LA+A SAQA AD + + ++ T R DF
Sbjct: 1 MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDF------ 54
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110
+Y G++ G + GY+ + + YG D YT+ +
Sbjct: 55 GDDVYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPM 114
Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160
R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGE 174
Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 VSDISALHYSGYDNNFAWSIGAGVRYD-ITPDIALDLSYRYLDAGKSSLSY 224
>gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
Length = 358
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 39/185 (21%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86
+ P + + Y G ++ G+ G + G F GY
Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQDTGTGGIYGDVGNDGPTHKNQLGAGAFLGY-- 70
Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG-- 139
+ G E + Y P D + G L + Y V+ L LY +G
Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVNNGAFKAQGVQLAAKLSYPVAQDLDLYTRLGGM 127
Query: 140 -PDVAQKYETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
+ + +G E +++ R+EY+ V +
Sbjct: 128 VWRADSSAYDAPTDTRSSNHDTGVSPLVALGAEY-AWTKNWATRMEYQW-----VSNIGD 181
Query: 196 TISLG 200
++G
Sbjct: 182 RATVG 186
>gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii]
Length = 238
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSESLVA 178
L + GY ++D L +Y +G V + G + + GVE ++ +
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADAKNNEGFKDHDTGVSPVFAGGVEY-AITPEIAT 59
Query: 179 RLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
RLEY+ + + V G + +S+GV +F
Sbjct: 60 RLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 92
>gi|253989527|ref|YP_003040883.1| outer membrane protein x [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780977|emb|CAQ84139.1| outer membrane protein x precursor [Photorhabdus asymbiotica]
Length = 176
Score = 36.2 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 10/158 (6%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
+G YA Y+G+ + ++ Y ++D + G Y
Sbjct: 26 STISGGYAQGHVKYDGNKSNKDTKGF--NLKYRYELDDHFSVIGSATYTGYDFKYGDPKP 83
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGV 167
L SL Y ++ + +Y VG E + + ++ G G+
Sbjct: 84 TKLDMDYYSLMAGPSYRFNEYVSVYGLVGAAHVHGKEDVFASGSRKKEKTSVSY--GAGL 141
Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
+ + +L Y SK ++ + GVG +F
Sbjct: 142 QFNPI-PNLAIDASYEYSKLGDLKVGTWVV--GVGYRF 176
>gi|289809872|ref|ZP_06540501.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 222
Score = 36.2 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%)
Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + GY+ D + E D + ++A + +
Sbjct: 43 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 102
Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163
R + G Y+ +S Y + G +A + + A
Sbjct: 103 RMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 162
Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195
G+G + ++++++ Y+ KV N
Sbjct: 163 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 193
>gi|299145119|ref|ZP_07038187.1| putative outer membrane protein probably involved in nutrient
binding [Bacteroides sp. 3_1_23]
gi|298515610|gb|EFI39491.1| putative outer membrane protein probably involved in nutrient
binding [Bacteroides sp. 3_1_23]
Length = 1090
Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%)
Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100
+ + + G Y L A + FG S G+ + + M G +R
Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651
Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
+ +N + + Y + ++++ + +K + A
Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIDGEGTKGLVRKKLSNDKLHWESTA-- 702
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
T +G++ G + L ++Y +KY+ ++ + L +G+
Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743
>gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114]
gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114]
Length = 324
Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 40/140 (28%), Gaps = 22/140 (15%)
Query: 57 YAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT---VPVL 106
Y G + G E ++ GG ++ GY + G D V
Sbjct: 21 YLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSWFALEGSWHDYGSPKTFYGVG 80
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAI 159
+ G+ S+ + V+D+L LYA G G + I
Sbjct: 81 DGYYSNATGVDLSV--KLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDSSIDD 138
Query: 160 GGTAGVGVEVGGLSESLVAR 179
G L+ + R
Sbjct: 139 IWEIGA---EYALAPNWSLR 155
>gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043]
gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043]
Length = 366
Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 73/225 (32%), Gaps = 40/225 (17%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++ALASF + AQAA + GG+ V + G Y
Sbjct: 1 MKKTAIAVAVALASFATIAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GN 47
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHSLHGI 116
Y G G F GY + G E G ++Y +++ +
Sbjct: 48 GYTGVNNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSTASNDDSASFKA 104
Query: 117 GG-SLRIRGGYEVSDSLLLYATVG---------PDVAQKYETGKAGEITPIAIGGTAGVG 166
G L + Y V L +Y +G + T + A +G
Sbjct: 105 QGIQLAAKLSYPVMPDLDVYTRLGGMVWRADSHAATSVNTGTRADINNDDTGVSPLAAIG 164
Query: 167 VEVGGLSESLVARLEYRAS----KYSKVEGFYNTI--SLGVGMKF 205
VE + ++ R++Y+ V + + S+G+ +F
Sbjct: 165 VEY-AIDKNWATRVDYQWVSNIGDAGTVGARPDNLLMSVGLSYRF 208
>gi|304394025|ref|ZP_07375948.1| hypothetical protein R2A130_1652 [Ahrensia sp. R2A130]
gi|303293465|gb|EFL87842.1| hypothetical protein R2A130_1652 [Ahrensia sp. R2A130]
Length = 452
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 46/142 (32%)
Query: 103 VPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPD--VAQKYETGKAGE---- 153
V + S G GS R R Y++ + L + +VG A + G
Sbjct: 171 DGVADPDDESDFGFTGSSRFRVEYDIPTNPGDYLFFQSVGATNIFADGDQADFLGSQQKA 230
Query: 154 -----------------------ITPIAIGGTAGVGVEVGG-LSESLVARLEYRA----- 184
G GV+ LS+++ A +YRA
Sbjct: 231 GVVFNGRTFIVSPYIHYGTTWLQDDRFRNQW--GAGVDTSFALSDTVTALAKYRASYEDY 288
Query: 185 --SKYSKV----EGFYNTISLG 200
+ +S + +G+ + + G
Sbjct: 289 RVTDFSTIGSQRDGWRHEVRAG 310
>gi|189464864|ref|ZP_03013649.1| hypothetical protein BACINT_01208 [Bacteroides intestinalis DSM
17393]
gi|189437138|gb|EDV06123.1| hypothetical protein BACINT_01208 [Bacteroides intestinalis DSM
17393]
Length = 838
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 42/151 (27%), Gaps = 34/151 (22%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
MQK ++ + LA+ FC +QAAD P++ P ++ PY L
Sbjct: 1 MQKQMKSLFTTMLAIGLFCQSQAADL-FTPVQKTELRAPSVPLITSDPYLSIWS-PYDKL 58
Query: 61 SALYNGSFGEEAHHNAG-----GSIF---------------------AGYNVEDSCIMYG 94
+ + H G G ++ Y + G
Sbjct: 59 NEGSTEHWTGTEHPLIGAVRVDGKVYRFMGKQTLEAILPMVEDEIWEGNYTFQQP---AG 115
Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGG 125
D+ Y G S R G
Sbjct: 116 NWTDIEYNANGWKAG---KAAFGSSDRSMIG 143
>gi|114799759|ref|YP_760236.1| hypothetical protein HNE_1524 [Hyphomonas neptunium ATCC 15444]
gi|114739933|gb|ABI78058.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 196
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 52/173 (30%), Gaps = 22/173 (12%)
Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAGLSALYNG 66
+ ++ A A A P A P T V ++ + ++ Y+
Sbjct: 7 LVSAAALFALIVPAAGATPSDPALAAVTPRAPAAITEADVIAAQNAWGEALVTIATTYDT 66
Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYG-------------VEGDVRYTVPVLADNIHSL 113
+EA A I A YN ED +++ EG + Y DN
Sbjct: 67 QGFDEARDVAEDIIEAAYNYEDGPVLFKPTLAAPPTTFRTTAEGALAY-FVGKNDNFPGD 125
Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI----GGT 162
G +L+ GY V +S +Y ++ + T
Sbjct: 126 SGF--ALKGWRGYSVENSA-IYIDGNTAISMGNVHLTDAAGNKTTVDKTWAWT 175
>gi|218676173|ref|YP_002394992.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
gi|218324441|emb|CAV25864.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
Length = 353
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 55/184 (29%), Gaps = 33/184 (17%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG-----SFGEEAHHNA-GGSIFAGYNVEDSCIMYG 94
+A + Y G GE+ +A G I++GYN D G
Sbjct: 12 VAASGLAAAPSIAATTYVGAKVGMGWLDSACVSGEKCDDDAIGAGIYSGYNFTDR---LG 68
Query: 95 VE--GDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQK 145
VE D L R V ++ GP
Sbjct: 69 VELSSDFLGDYKTSFSKNGVTSNFSDPLIAISLTPMYRL--PVQQEFDVFFKAGPA---- 122
Query: 146 YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK---VEGFYNTISLGV 201
Y + + +AG+G+E LS R+EY+ + + N +++G+
Sbjct: 123 YISHGGETDVVL----SAGIGLE-KQLSSDWAVRVEYQYFDDFDDNYVQDLNSNFVTVGL 177
Query: 202 GMKF 205
F
Sbjct: 178 SYNF 181
>gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
Length = 360
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 34/192 (17%)
Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103
Y + + + G+ L G+ ++ +F GY + + G+ +V Y
Sbjct: 27 YAGAKAGWASFHDGIEQLDAAKGGKYGINKNSVTYGVFGGYQI-LNQDKLGLATEVGYDY 85
Query: 104 -----------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152
G ++ ++ YEV +L +Y G +
Sbjct: 86 FGRVRGTEKPNDKADKQTFRHAAHGATIALKPSYEVLPNLDVYGKAGIALVNNTYKTFNA 145
Query: 153 EITP-----IAIGGTAGVGVEVGGLSESLVARLEYR---------ASKYSKVEGFY---- 194
G GVE L E L AR+EY+ SK ++
Sbjct: 146 AQEKVKSRRFQSSLILGAGVEYAILPE-LAARIEYQWLNNAGKASYSKLNRRGATDYRPD 204
Query: 195 -NTISLGVGMKF 205
+++S G+ +F
Sbjct: 205 ISSVSAGLSYRF 216
>gi|293369298|ref|ZP_06615885.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD
CMC 3f]
gi|292635628|gb|EFF54133.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD
CMC 3f]
Length = 1090
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%)
Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100
+ + + G Y L A + FG S G+ + + M G +R
Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651
Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
+ +N + + Y + ++++ + +K + A
Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIDGEGTKGLVRKKLSNDKLHWESTA-- 702
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
T +G++ G + L ++Y +KY+ ++ + L +G+
Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743
>gi|240950190|ref|ZP_04754477.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305]
gi|240295277|gb|EER46063.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305]
Length = 205
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 21/115 (18%)
Query: 50 RHDFNGPYAGLSA--------------LYNGSFGEEAHHNAGG---SIFAGYNVEDS-CI 91
+ F G Y G + Y G+ + G + AGY +
Sbjct: 21 ANTFTGGYLGGTITSVKQEFSVPYSELGYQTYEGKYIADGSRGTRVGVTAGYGFDIGSNF 80
Query: 92 MYGVEGDVRYTVPVLA---DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
+ +EG++ ++ I + + GY V + L Y + +
Sbjct: 81 VGQLEGELAFSNTKTTNKLGEIITKERFATNASAILGYRVLGNFLPYVKASVNAS 135
>gi|237722056|ref|ZP_04552537.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229448925|gb|EEO54716.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 1090
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%)
Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100
+ + + G Y L A + FG S G+ + + M G +R
Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651
Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
+ +N + + Y + ++++ + +K + A
Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIDGEGTKGLVRKKLSNDKLHWESTA-- 702
Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
T +G++ G + L ++Y +KY+ ++ + L +G+
Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743
>gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 357
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 58/196 (29%), Gaps = 40/196 (20%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86
+ P + + Y G ++ G+ G G F GY
Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY-- 70
Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGP- 140
+ G E + Y P D + G L + Y ++ L LY +G
Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGM 127
Query: 141 ---DVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLSESLVARLEYRA-SKYSKVEG-- 192
+ ++ G + +G E +++ R+EY+ S
Sbjct: 128 VWRADSSAFDAATGDRQNNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKATVG 186
Query: 193 ---FYNTISLGVGMKF 205
+S+GV +F
Sbjct: 187 ARPDNGMLSVGVSYRF 202
>gi|227499113|ref|ZP_03929248.1| predicted protein [Acidaminococcus sp. D21]
gi|226904560|gb|EEH90478.1| predicted protein [Acidaminococcus sp. D21]
Length = 216
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 114 HGIGGSLRIRG---GY-EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169
+G GG +R R GY + ++ + AT + + K G GVG
Sbjct: 121 YGFGGYVRNRAHHRGYTDNTNGFQVGATGRLPLGKTTPWAKFGIGN-TITQYEVGVG--- 176
Query: 170 GGLSESLVARLEY---RASKY-SKVEGFYNTISLGVGMKF 205
++++ A + Y + + + + +++GV KF
Sbjct: 177 YAITDNWEANVSYNDSKYKDFSGDTDVKTHGVNVGVSYKF 216
>gi|170680671|ref|YP_001746676.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5]
gi|218698021|ref|YP_002405688.1| exported surface protein precursor [Escherichia coli 55989]
gi|170518389|gb|ACB16567.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5]
gi|218354753|emb|CAV01825.1| exported surface protein precursor [Escherichia coli 55989]
gi|324019247|gb|EGB88466.1| OmpA-like transmembrane domain protein [Escherichia coli MS 117-3]
Length = 263
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 44/230 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M ++ + VS+LA+A S QA + G A+ + + +G
Sbjct: 15 MIEMNKVIAVSALAMAGMFSTQA--LADESKTGFYVTGKAGASVMSLADQRFLSG---DG 69
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIM---------------YGVEGDVRYTV 103
G+ G I AGY+ + S + Y V+ D ++
Sbjct: 70 EETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKD-SWSG 128
Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA---------- 151
D++ + + +L + Y+ + + + G A+ ++
Sbjct: 129 GYWRDDLKNEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGS 187
Query: 152 -GEITPIAIG------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
G + G + G GV ++ + L YR Y
Sbjct: 188 SGRESLSRSGSADNFAWSLGAGVRYD-VTPDIALDLSYRYLDAGDSSVSY 236
>gi|331650258|ref|ZP_08351330.1| adhesin/virulence factor Hek [Escherichia coli M605]
gi|331040652|gb|EGI12810.1| adhesin/virulence factor Hek [Escherichia coli M605]
Length = 263
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 44/230 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M ++ + VS+LA+A S QA + G A+ + + +G
Sbjct: 15 MIEMNKVIAVSALAMAGMFSTQA--LADESKTGFYVTGKAGASVMSLADQRFLSG---DG 69
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIM---------------YGVEGDVRYTV 103
G+ G I AGY+ + S + Y V+ D ++
Sbjct: 70 EETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKD-SWSG 128
Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA---------- 151
D++ + + +L + Y+ + + + G A+ ++
Sbjct: 129 GYWRDDLKNEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGS 187
Query: 152 -GEITPIAIG------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
G + G + G GV ++ + L YR Y
Sbjct: 188 SGRESLSRSGSADNFAWSLGAGVRYD-VTPDIALDLSYRYLDAGDSSVSY 236
>gi|330809271|ref|YP_004353733.1| hypothetical protein PSEBR_a2449 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377379|gb|AEA68729.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 232
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 50/192 (26%), Gaps = 46/192 (23%)
Query: 47 VPIRHDFN---GPYAGLSALYNGSFGEEAHHNAGGSIFAGYN------VEDSCIM----- 92
+ F GPY N ++ N+ + YN +
Sbjct: 20 IAPASSFADNLGPYVSGMGGVNWVSKQDLTQNSNDFVEMEYNQPLHSGYATGLAVGWRFP 79
Query: 93 YGVEGDVRYTVPVLADNIHSLHGIGG-------------SLRIRGGYEVSD------SLL 133
G+ +V + + + G SL Y+VS+
Sbjct: 80 VGLRPEVELSYRRNTMDQFNNRVYEGGSSIEGKGEEEASSLMANLWYDVSNLPAPFSRFT 139
Query: 134 LYATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-- 184
Y G A G G G GV LS+ L+YR
Sbjct: 140 PYVGGGLGYAVLTIKGLEAGGVEFGGTHRDTVSAWQLGAGVAYE-LSDHWSMSLDYRYFK 198
Query: 185 ---SKYSKVEGF 193
+ Y K++G
Sbjct: 199 TGEANYGKIQGL 210
>gi|309704068|emb|CBJ03414.1| heat resistant agglutinin 1 [Escherichia coli ETEC H10407]
Length = 248
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 44/228 (19%)
Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + VS+LA+A SAQA AD + + ++ R DF
Sbjct: 1 MKKVIAVSALAMAGMFSAQALADESKTGFYVTGKAGASVVMQTDQRFRQDF------GDD 54
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113
+Y G++ G + GY+ + + YG D RYT+ +
Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDG 114
Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160
R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISD 174
Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 ISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221
>gi|330908612|gb|EGH37131.1| peptide transport periplasmic protein sapA [Escherichia coli AA86]
Length = 248
Score = 35.8 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 69/228 (30%), Gaps = 44/228 (19%)
Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + VS+LA+A SAQA AD + + ++ R D
Sbjct: 1 MKKVIAVSALAMAGVFSAQALADENKTGFYVTGKAGASVVAQTDQRFRQDL------GED 54
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113
+Y G++ G + GY+ + + YG D YT+ + +
Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGNG 114
Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160
R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYTDTSWNESGEISD 174
Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 ISELHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221
>gi|294789631|ref|ZP_06754865.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
gi|294482432|gb|EFG30125.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
Length = 185
Score = 35.8 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 22/130 (16%)
Query: 89 SCIMYGVEG--DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146
+ ++ VE ++ + + + S+ + GY V+ L+ YA +Y
Sbjct: 64 NNLVGAVEAKANLNKSDAFDTNGVKISQKDKYSIGYQQGYRVTKDLMPYAKA------EY 117
Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY-----------SKVEGFYN 195
K A G G+G + +++++ EY S+ S ++ N
Sbjct: 118 INSKF--DDARANGYGVGMGAKY-AVTDNVELGAEYVHSRLKGSRLKGNGSASDLKLRGN 174
Query: 196 TISLGVGMKF 205
T+S GV +F
Sbjct: 175 TVSAGVAYRF 184
>gi|254410458|ref|ZP_05024237.1| hypothetical protein MC7420_2973 [Microcoleus chthonoplastes PCC
7420]
gi|196182664|gb|EDX77649.1| hypothetical protein MC7420_2973 [Microcoleus chthonoplastes PCC
7420]
Length = 465
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGP 56
+ L V ++S+ ++ ++ AA + G + + N+ P + +
Sbjct: 385 RTLNQTVAIASVGIS--TASLAASALTEQAEGIVKSILPVPANQPTPALNHWANF 437
>gi|255690358|ref|ZP_05414033.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
gi|260624163|gb|EEX47034.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
Length = 175
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI-S 198
D + G G G GV+ ++ + + E+R V F + +
Sbjct: 113 IDGNHVHIDGDDDSDNECRFGMNIGGGVDF-AIARNWMMNFEFRY---QLVSDFDQAVFN 168
Query: 199 LGVGMKF 205
LG +F
Sbjct: 169 LGFAYRF 175
>gi|331685335|ref|ZP_08385921.1| adhesin/virulence factor Hek [Escherichia coli H299]
gi|323939576|gb|EGB35782.1| tia protein [Escherichia coli E482]
gi|331077706|gb|EGI48918.1| adhesin/virulence factor Hek [Escherichia coli H299]
Length = 248
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 44/228 (19%)
Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + VS+LA+A SAQA AD + + ++ R DF
Sbjct: 1 MKKVIAVSALAMAGMFSAQALADESKTGFYVTGKAGASVVMQTDQRFRQDF------GDD 54
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113
+Y G++ G + GY+ + + YG D RYT+ +
Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDG 114
Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160
R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISD 174
Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 ISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221
>gi|284008859|emb|CBA75661.1| outer membrane adhesin [Arsenophonus nasoniae]
Length = 245
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 32/158 (20%)
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGIGG----- 118
+G + GG I GYN + + VE D L N + I G
Sbjct: 58 SGKLDDITSGAFGGGIALGYNFKPMFQLPVRVELDFT-ARSNLKKNGSNGAEIAGQPLDI 116
Query: 119 ---------SLRIRGGYEVSDS--LLLYATVGPDVAQKYETGK-------------AGEI 154
+L + Y+ +S Y G VAQ T +G+
Sbjct: 117 EMKDKIQINTLMVNAMYDFENSSQFTPYVLAGMGVAQNNRTTDISADYQNKNAKLLSGKK 176
Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192
+ G GV+ ++ +L L YR K +
Sbjct: 177 VNYNFAWSIGAGVKYD-INSNLALDLSYRYINAGKAKT 213
>gi|196019022|ref|XP_002118912.1| hypothetical protein TRIADDRAFT_62899 [Trichoplax adhaerens]
gi|190577756|gb|EDV18602.1| hypothetical protein TRIADDRAFT_62899 [Trichoplax adhaerens]
Length = 193
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
A K T + T G+G + L YR KV N
Sbjct: 120 AGKKTGAGKIVTVGSDSKTKTNFAWNVGLGAMYN-IDPEFAVDLTYRYRDLGKVMKGDND 178
Query: 197 ------ISLGVGMKF 205
+++G+ KF
Sbjct: 179 KLKSHNVTVGLVYKF 193
>gi|163743238|ref|ZP_02150619.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
gi|161383426|gb|EDQ07814.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
Length = 135
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 13/114 (11%)
Query: 76 AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135
+ + GY+ + ++ G E +V + V +D +++R GY++ L Y
Sbjct: 15 SASGLHLGYDHDFGRVVLGGEVEVDRSGRVRSDLTEDQTR---RIKLRAGYDM-GETLGY 70
Query: 136 ATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
TVG + G G+G+ L+ +L EY S
Sbjct: 71 VTVGSARNETATDSD--------NGAVYGLGLSYS-LNRALRVSGEYLHQDASD 115
>gi|330894837|gb|AEC47883.1| Omp1 [Moritella viscosa]
Length = 193
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 23/183 (12%)
Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSI---FAGYNVEDSCI 91
G + IA V D +G Y G A + + + G GY
Sbjct: 8 GALAAIALTTSVQANQDVSGFYLGGGAGSTTVNLDDAFDEDTDGKTLKFITGYQF---NR 64
Query: 92 MYGVEGDVRYTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
+ +E + D +++ S+ GY + L + +G
Sbjct: 65 IVAIEAQYTKYGEITPDKNITRDRKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLD 124
Query: 145 KYETGKAGEITPIAIGGTA---GVGVEV-GGLSESLVARLEYRASKYS-KVEGFYNTISL 199
++ KA + TA G G+E + R+ Y A ++ +V+ I +
Sbjct: 125 LGQSSKALKDDNA----TAVHLGAGLEYTPAALSGVSFRVGYEAELFAIEVDASSEDIDV 180
Query: 200 GVG 202
VG
Sbjct: 181 LVG 183
>gi|225435708|ref|XP_002283489.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|147854540|emb|CAN78578.1| hypothetical protein VITISV_013679 [Vitis vinifera]
Length = 612
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIA----TNRYVPIRHDFNGP 56
M+ + V+S A + A++ V A RG T P ++GP
Sbjct: 1 MRSSWADSVVNSAAENVAAGSSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYSGP 60
Query: 57 Y-AGLSALYNGSFGEEAHHNA------GGSIFAGYNVEDSCIMYGVEGDVR-YTVPVLAD 108
A + Y+G+ +++ G G+N + G E +V + V +
Sbjct: 61 SSANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGGWNNKSGGWDRGREREVNPFGDDVDTE 120
Query: 109 NIHSLHGIGG 118
+ S G
Sbjct: 121 KVFSEQENTG 130
>gi|222055021|ref|YP_002537383.1| hypothetical protein Geob_1925 [Geobacter sp. FRC-32]
gi|221564310|gb|ACM20282.1| hypothetical protein Geob_1925 [Geobacter sp. FRC-32]
Length = 189
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 67/212 (31%), Gaps = 30/212 (14%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ L +L L +A AA G + +F G Y L
Sbjct: 1 MKKVVLIAACFTLLLGMSSAALAAKGDTELDFGIGFATAPYD-ESDLGWGLNFGGGYEFL 59
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM-YGVEGDVRYTVPVLADNIHSLHGIGGS 119
+ + + GY +G + DV ++ + S
Sbjct: 60 QLSATRNDTLQIRGDI------GYESWSGDFHGFGFDEDVDFSRVPV------------S 101
Query: 120 LRIRGGYEVS--DSLLLYATVGPDVAQKYETGKAG----EITPIAIGGTAGVGVEVGGLS 173
+ R Y + +L ++ +++ +G T G GVE L+
Sbjct: 102 VGCRYYYPIKQVKNLRVFGQASLELSFDSIEVGTPFGKVSDDETNVGVTPGAGVEY-MLN 160
Query: 174 ESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205
++ + + + + Y T+ G+G +F
Sbjct: 161 KNFFVQAQMKE---HLISDPYFTMQGGIGFRF 189
>gi|37526372|ref|NP_929716.1| hypothetical protein plu2480 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785803|emb|CAE14854.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 175
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 11/158 (6%)
Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
+G YA +NG + G ++ Y ++++ +GV + YT
Sbjct: 26 STISGGYAQSHVKFNGEKIDGNPKGKGFNLKYRYELDNN---FGVISSLTYTHKGFDKFD 82
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
+ + SL Y +D + Y +G + G T + G+G++
Sbjct: 83 VNYY----SLMAGPAYRFNDYVSAYGMIGAARGEFEVPVLNGSYTEGKSSVSYGLGLQFN 138
Query: 171 GLSESLVARLEYRASKYSKVEGFYNTIS---LGVGMKF 205
+ + Y +K++ + +GVG +F
Sbjct: 139 PV-PNWTIDTSYEYAKFNDARLGDLKVGTWVVGVGYRF 175
>gi|116623907|ref|YP_826063.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116227069|gb|ABJ85778.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076]
Length = 525
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 16/46 (34%)
Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
LA + AA P R +P P+R + G YA
Sbjct: 56 LAVASTPAAATPSVARATPARVQLPANPARNNQPVRIPWAGFYAAG 101
>gi|167957156|ref|ZP_02544230.1| hypothetical protein cdiviTM7_00686 [candidate division TM7
single-cell isolate TM7c]
Length = 290
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138
S+ GY + + + G + T P ++ +G G ++RGGY + +
Sbjct: 25 SLSGGYGFQSNQKVVGRDA----TNPAAITDLKGSYGEGYQAQLRGGYFFTKRWGAELAL 80
Query: 139 GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG-LSESLVARL 180
G + T K + A G G + ++++L R
Sbjct: 81 GYLHGEDIATNKNQILDMTAHGRAFGASLSAVFNITDNLYIRA 123
>gi|269839216|ref|YP_003323908.1| hypothetical protein Tter_2186 [Thermobaculum terrenum ATCC
BAA-798]
gi|269790946|gb|ACZ43086.1| hypothetical protein Tter_2186 [Thermobaculum terrenum ATCC
BAA-798]
Length = 103
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNA 76
+ V ++ +PT+ + YV PYA +S + G +G++ +
Sbjct: 51 EAVDKSALPFTLTLPTVDQDSYVAAN-----PYASISGTWTGGWGDDTKKDK 97
>gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
Length = 358
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 57/196 (29%), Gaps = 40/196 (20%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86
+ P + + Y G ++ G+ G G F GY
Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY-- 70
Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG-- 139
+ G E + Y P D + G L + Y ++ L LY +G
Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGM 127
Query: 140 -PDVAQKYETGKAGE---ITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEG-- 192
+GE + +G E +++ R+EY+ S
Sbjct: 128 VWRADSSAFNAASGERLNNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKATVG 186
Query: 193 ---FYNTISLGVGMKF 205
+S+GV +F
Sbjct: 187 ARPDNGMLSVGVSYRF 202
>gi|307610344|emb|CBW99912.1| hypothetical protein LPW_16701 [Legionella pneumophila 130b]
Length = 254
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 21/153 (13%)
Query: 51 HDFNGPYAGLSA--LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108
D++G G Y F H+ G F + + I Y + + Y+ +
Sbjct: 71 FDWHGSGLGGEIYLGYEKFF--RTHYYIGLEGFFNRSSNEGKI-YFFDSNELYSRILKGS 127
Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE------TGKAGEITPIA---- 158
L IR G + ++Y VG V+ +G G +
Sbjct: 128 ---FKQKWQSGLAIRPGIYLPSVGIIYGRVGWIVSDVNLSGSITQSGPFGSFSGRFSNTK 184
Query: 159 --IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189
G G G+E+ L+++ R+E+ ++
Sbjct: 185 KKNGVQLGTGLELE-LTKNWRCRVEWDWNRLQD 216
>gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565]
gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 364
Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 44/187 (23%)
Query: 57 YAGLSALYNGSFGEEAH-----------------HNAGGSIFAGYNVEDSCIMYGVEGDV 99
Y G A ++ +G + + + G +FAGY + + G E +
Sbjct: 29 YVGGKAGWSNYYGVDHNQYAESIAQTLGNTSENTDDLGLGLFAGYQLNPN---LGFE--L 83
Query: 100 RYTV-------PVLADNIHSLHGIGGSLRI--RGGYEVSDSLLLYATVG--PDVAQKYET 148
Y N + ++ + + ++ L LY +G +
Sbjct: 84 GYDWLGKYDTTSGTGANTLNTEAKSQMIQATMKISFPATNVLDLYGRLGGAYAWTDSEIS 143
Query: 149 GKAGEITPIAIGGT-AGV-GVEVGGLSESLVARLEYRAS--------KYSKVEGFYNTIS 198
T G G G E + ARLEY+ + S +E IS
Sbjct: 144 FANTSETGKKHGAAFVGALGAEY-AIDRDWAARLEYQYTTPLGDASLDRSGIEMDNGLIS 202
Query: 199 LGVGMKF 205
G+ +F
Sbjct: 203 FGMLYRF 209
>gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 322
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 41/141 (29%), Gaps = 22/141 (15%)
Query: 57 YAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT---VPVL 106
Y G + G E ++ GG ++ GY + G D V
Sbjct: 21 YLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSWFALEGSWHDYGSPKTFYGVG 80
Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAI 159
+ G+ S+ + V+D+L LYA G G + +
Sbjct: 81 DGYYSNATGVDLSV--KLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDSSLDD 138
Query: 160 GGTAGVGVEVGGLSESLVARL 180
G L+ + RL
Sbjct: 139 IWEIGA---EYALAPNWSLRL 156
>gi|189024144|ref|YP_001934912.1| outer membrane protein [Brucella abortus S19]
gi|46251210|gb|AAS84576.1| truncated Omp25b [Brucella abortus]
gi|46251225|gb|AAS84583.1| truncated Omp25b [Brucella abortus]
gi|46251227|gb|AAS84584.1| truncated Omp25b [Brucella abortus]
gi|189019716|gb|ACD72438.1| outer membrane protein, putative [Brucella abortus S19]
Length = 68
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 6/36 (16%), Positives = 9/36 (25%)
Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG 77
V +NG Y G Y + +
Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTS 66
>gi|19911156|dbj|BAB86906.1| outer membrane protein 18/16 [Actinobacillus actinomycetemcomitans]
Length = 188
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 16/179 (8%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV-EGD 98
+ + DF G G+ ++A + + A Y ++ G+ EG
Sbjct: 13 AVLVSTSAVASSDFTGFGIGVGVGTTKY--KDAKRISNVDLIADYGIDYGNDFVGIIEGK 70
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGG------YEVSDSLLLYATVGPDVAQKYET---- 148
++ L DN S + + + R G Y V+ S+L YA VG A+
Sbjct: 71 LKLNKSTLHDNNASGYRGKLNEKARLGVSYLQGYRVTPSILPYAKVGVQTAKFESEVRTR 130
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY--RASKYSKVEGFYNTISLGVGMKF 205
+ + G G GV+V + + ++ LEY +K+ + N S +F
Sbjct: 131 NYSATHSDTKNGIGFGAGVKVNLVPDFELS-LEYLRTHNKFDGQKLRGNVYSTNATYRF 188
>gi|261866907|ref|YP_003254829.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293391272|ref|ZP_06635606.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|261412239|gb|ACX81610.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|290951806|gb|EFE01925.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 187
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 16/179 (8%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV-EGD 98
+ + DF G G+ ++A + + A Y ++ G+ EG
Sbjct: 12 AVLVSTSAVASSDFTGFGIGVGVGTTKY--KDAKRISNVDLIADYGIDYGNDFVGIIEGK 69
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGG------YEVSDSLLLYATVGPDVAQKYET---- 148
++ L DN S + + + R G Y V+ S+L YA VG A+
Sbjct: 70 LKLNKSTLHDNNASGYRGKLNEKARLGVSYLQGYRVTPSILPYAKVGVQTAKFESEVRTR 129
Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY--RASKYSKVEGFYNTISLGVGMKF 205
+ + G G GV+V + + ++ LEY +K+ + N S +F
Sbjct: 130 NYSATHSDTKNGIGFGAGVKVNLVPDFELS-LEYLRTHNKFDGQKLRGNVYSTNATYRF 187
>gi|329120556|ref|ZP_08249219.1| surface protein A [Neisseria bacilliformis ATCC BAA-1200]
gi|327460780|gb|EGF07114.1| surface protein A [Neisseria bacilliformis ATCC BAA-1200]
Length = 231
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 47/176 (26%), Gaps = 32/176 (18%)
Query: 55 GPYAGLSAL-----YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109
G Y Y + AGY+ D + V D YT D
Sbjct: 63 GFYVQGDLGHATVKYKEDGDSWKTKGFSPRLSAGYDFGD----FRVAAD--YTHYKKYDE 116
Query: 110 IHSLH----GIGGSLR-----IRGGYEVSDSLLLYATVGPDVAQKYETGKA--------G 152
+ R ++ + Y + +
Sbjct: 117 TLTDQFGTDHFEAKARSIGVSGIYDFDTGTPVKPYVGARIGINRISLEATETAPGFYEKE 176
Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF---YNTISLGVGMKF 205
+ +G A GV +S+++ YR + + K +G N GV +KF
Sbjct: 177 SYSKTKLGLGAMAGVSYD-ISDNIALDAGYRYNHWGKFDGVKVHSNEFHGGVRVKF 231
>gi|196229516|ref|ZP_03128381.1| hypothetical protein CfE428DRAFT_1546 [Chthoniobacter flavus
Ellin428]
gi|196226748|gb|EDY21253.1| hypothetical protein CfE428DRAFT_1546 [Chthoniobacter flavus
Ellin428]
Length = 178
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 64/206 (31%), Gaps = 31/206 (15%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M+K+ + LA SA A ++ + VPT + ++ D G +A
Sbjct: 1 MKKIAIPFVA---CLALASSAFAGHEMKEM----KQPVPTEPCFKDQELQLDVFGSWA-- 51
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ GG + Y GV D + L GSL
Sbjct: 52 -DTHRHDNVAGPKDGFGGGLGVNYFFMR---YLGVGADANIV-----SASNGLWTFSGSL 102
Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG-GTAGVGVEVGGLSESLVAR 179
R Y + +A TG + I G G G+E + L
Sbjct: 103 IAR--YPIE-------AGNLCLAPYILTGGGFQTDGINAGTWHVGGGLEWRA-THHLGIY 152
Query: 180 LEYRASKYSKVEGFYNTISLGVGMKF 205
E R + +++ + +G++F
Sbjct: 153 GEGRYTWAGA--HEEDSVRVSLGVRF 176
>gi|94496074|ref|ZP_01302653.1| hypothetical protein SKA58_15867 [Sphingomonas sp. SKA58]
gi|94424766|gb|EAT09788.1| hypothetical protein SKA58_15867 [Sphingomonas sp. SKA58]
Length = 209
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 38/123 (30%), Gaps = 21/123 (17%)
Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAG----------YNVEDSCIMYGVEGDVRYTVPV 105
PY G+ + E + G YNV ++ GVEG
Sbjct: 58 PYVGVMGGVHNFDSETGKEGIPPVGYKGRMVEGVAGVNYNV-AGPLVVGVEG-------T 109
Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165
+ + + R G + L++ VG + G +P G T G
Sbjct: 110 ASKGVSGDIDWEYGVAGRAGVKAGKDSLIFGKVGY---KWVNFDALGPDSPDFHGTTYGA 166
Query: 166 GVE 168
GVE
Sbjct: 167 GVE 169
>gi|187478192|ref|YP_786216.1| flagellar hook-associated protein 3 [Bordetella avium 197N]
gi|115422778|emb|CAJ49306.1| flagellar hook-associated protein 3 [Bordetella avium 197N]
Length = 410
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 9/121 (7%)
Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG--IGGSLRIRGGYEV 128
+ G +F+GY + G+V Y + + + GS G ++
Sbjct: 126 NSTDGNGQYLFSGYQGNTQPFVIDASGNVSYNGDKGQRMVQADQSRQLAGS---DIGTDI 182
Query: 129 SDSLLL----YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
+ Y + + G G + + + +LEY
Sbjct: 183 FGRAVPGTLSYIASAGAANKGTGQFSTVSLKSPGAGNFVGADFSISFANNATTGKLEYTV 242
Query: 185 S 185
+
Sbjct: 243 T 243
>gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 455
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 37/142 (26%), Gaps = 7/142 (4%)
Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121
Y + G I AGYN G E YT +
Sbjct: 39 GGYTFDGKQHLETQPVGGIRAGYNFTKH---LGAEALFDYTRTEGTRSSTKTDFYRYGAD 95
Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
+ L+ Y G + G G++ +S++ R +
Sbjct: 96 ALLHIFPDNRLVPYIAAGYSGMSLDSNDGTKLTRGVFD---YGPGIKY-FISDTWALRGD 151
Query: 182 YRASKYSKVEGFYNTISLGVGM 203
+R + Y+ +G+
Sbjct: 152 FRHLIFKHEGDSYSNYEYNLGL 173
>gi|330447800|ref|ZP_08311448.1| putative uncharacterized protein PP1185 [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491991|dbj|GAA05945.1| putative uncharacterized protein PP1185 [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 188
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 20/144 (13%)
Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM---------YGVEGDVRYTVPVLA 107
+ G Y + +H S A Y + I+ YG + D A
Sbjct: 27 FMGGGVGYQLDNFKGSHKMH--SEDASYQIRGGIIVDDTHRLMATYGYKKDKFNFYDADA 84
Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSL-----LLYATVGPDVAQKYETGKAGEITPIAIGGT 162
D + + H L Y+ + L K + G+ +
Sbjct: 85 DGVKAKHKQDLYL---ASYDYLVPVGANVNLFAGASMGAAHNKVTHQEGGKKSSTDFVWG 141
Query: 163 AGVGVEVGGLSESLVARLEYRASK 186
+G + L++++ L YR
Sbjct: 142 GQLGA-MVQLTDNISTDLTYRYLD 164
>gi|299147800|ref|ZP_07040863.1| putative outer membrane protein, probably involved in nutrient
binding [Bacteroides sp. 3_1_23]
gi|298513983|gb|EFI37869.1| putative outer membrane protein, probably involved in nutrient
binding [Bacteroides sp. 3_1_23]
Length = 1019
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149
+ V +N +L++R Y + + + Y T+G + YE G
Sbjct: 597 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 656
Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
E++ + TA +GV+ + L +EY + ++K +++ +G
Sbjct: 657 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 715
>gi|284922912|emb|CBG36001.1| heat resistant agglutinin 1 [Escherichia coli 042]
Length = 263
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 44/230 (19%)
Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60
M ++ + VS+LA+A S QA + G A+ + + +G
Sbjct: 15 MIEMNKVIAVSALAMAGMFSTQA--LADESKTGFYVTGKAGASVMSLADQRFLSG---DG 69
Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIM---------------YGVEGDVRYTV 103
G+ G I AGY+ + S + Y V+ D ++
Sbjct: 70 EETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKD-SWSG 128
Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA---------- 151
D++ + + +L + Y+ + + + G A+ ++
Sbjct: 129 GYWRDDLKNEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGS 187
Query: 152 -GEITPIAIG------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
G + G + G GV ++ + L YR Y
Sbjct: 188 SGRESLSRSGSADNFAWSFGAGVRYD-VTPDIALDLSYRYLDAGDSSVSY 236
>gi|149190315|ref|ZP_01868588.1| hypothetical protein VSAK1_13917 [Vibrio shilonii AK1]
gi|148835804|gb|EDL52768.1| hypothetical protein VSAK1_13917 [Vibrio shilonii AK1]
Length = 165
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 24/157 (15%)
Query: 56 PYAGLSALYNGSFGEEAHHNAGG----SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111
Y G + E + + AGY+ + +EG Y + +
Sbjct: 26 FYLGTIYSTVRAADESVDKSTSNISNLGLQAGYSFNQH---FALEGRYFYALNRSSSLPQ 82
Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
I + Y ++D+ +YA G + A++Y + + G G GV
Sbjct: 83 HQSQIY----AKASYPLNDTFSIYALAGVNFAKEY--SASSQTKGYFSG---GAGVSYT- 132
Query: 172 LSESLVARLEY---RASKYSKVEGFYNTISLGVGMKF 205
++ L LEY SK+ K N +++G+ F
Sbjct: 133 FTDKLKGSLEYVSLAHSKFYK----GNAVNIGLSYCF 165
>gi|94266061|ref|ZP_01289780.1| Twin-arginine translocation pathway signal [delta proteobacterium
MLMS-1]
gi|93453383|gb|EAT03811.1| Twin-arginine translocation pathway signal [delta proteobacterium
MLMS-1]
Length = 234
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 62/203 (30%), Gaps = 34/203 (16%)
Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVP-----TIATNRYVPIRHDF- 53
M+K+ + +L A A A+ +P T + ++DF
Sbjct: 14 MKKIMIGAAACALTALFAGPAMAEANDGYYVSGNIGVAMPRDSTATYPDTPGLSQKYDFD 73
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH-S 112
+G GL+ Y A + S I D+ + + ++ +
Sbjct: 74 SGLALGLALGYKLGPARVEGEIA---------YQKSDI-----DDITVSQAGTSTSLSAA 119
Query: 113 LHGIGGSLRI-----RGGYEVSDS--LLLYATVGPDVAQKYETGKAG----EITPIAIGG 161
G + G Y+ ++ Y T G +A+ + +
Sbjct: 120 GVQFSGDAKATSFLLNGYYDFHNNSAFTPYLTAGLGLAKVKVSQTVVGQPWSDSDTVFAY 179
Query: 162 TAGVGVEVGGLSESLVARLEYRA 184
GVG E L++++ YR
Sbjct: 180 QVGVGTEY-ALNQTVSLDARYRY 201
>gi|260174234|ref|ZP_05760646.1| TonB-dependent receptor [Bacteroides sp. D2]
gi|315922503|ref|ZP_07918743.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696378|gb|EFS33213.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 1019
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149
+ V +N +L++R Y + + + Y T+G + YE G
Sbjct: 597 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 656
Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
E++ + TA +GV+ + L +EY + ++K +++ +G
Sbjct: 657 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 715
>gi|239620737|ref|ZP_04663768.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|239516313|gb|EEQ56180.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG
52486]
Length = 576
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 6/117 (5%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S L S Q PV + P + G Y + A
Sbjct: 19 VTMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAG 76
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + + ++Y D R A+ I + G SL
Sbjct: 77 VQSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129
>gi|310800507|gb|EFQ35400.1| GMC oxidoreductase [Glomerella graminicola M1.001]
Length = 645
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 32/175 (18%)
Query: 24 ADPVRRAHHGGRGVVPTI--ATNRYVPIRH-----------DF----NGPYAGLSALYNG 66
AD V + G P + N P + D+ +GP + Y
Sbjct: 157 ADAVGDQSYNWEGFSPHLIKPVNFTAPSSYRFPNSTARHPPDWTSHTSGPLQLGFSNYAW 216
Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126
+ G G+ + G V Y + L + S R G
Sbjct: 217 PWASWVKKALIG---LGFEENPDGFVGGSLQGVGYQLSTLDATSFTKETSDSSYLERLGM 273
Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181
+ +++L++Y T + + A GV V+ GGL L R E
Sbjct: 274 D-NENLVVY-------TNSLVTRILLDDSKTAN----GVEVDYGGLMLKLACRKE 316
>gi|293368764|ref|ZP_06615368.1| TonB-dependent receptor [Bacteroides ovatus SD CMC 3f]
gi|292636069|gb|EFF54557.1| TonB-dependent receptor [Bacteroides ovatus SD CMC 3f]
Length = 1019
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149
+ V +N +L++R Y + + + Y T+G + YE G
Sbjct: 597 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 656
Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
E++ + TA +GV+ + L +EY + ++K +++ +G
Sbjct: 657 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 715
>gi|237718249|ref|ZP_04548730.1| TonB-dependent receptor [Bacteroides sp. 2_2_4]
gi|229452433|gb|EEO58224.1| TonB-dependent receptor [Bacteroides sp. 2_2_4]
Length = 1008
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149
+ V +N +L++R Y + + + Y T+G + YE G
Sbjct: 586 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 645
Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203
E++ + TA +GV+ + L +EY + ++K +++ +G
Sbjct: 646 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 704
>gi|293393264|ref|ZP_06637579.1| porin [Serratia odorifera DSM 4582]
gi|291424410|gb|EFE97624.1| porin [Serratia odorifera DSM 4582]
Length = 227
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 126 YEVSDSLLLYATVGPDVAQKYE-------TGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178
Y + ++AT G +++ + + + G GV + E L
Sbjct: 122 YALGYGFSVFATAGVGISKIKAGGWQGVPSREYDSTSQNNFTYAIGGGVSYAPI-ERLNV 180
Query: 179 RLEYRASKYSKVEGFYNTISLGVGMK 204
L YR K+E YN + G+K
Sbjct: 181 DLGYRYVDMGKIESGYNRFANARGLK 206
>gi|165920940|ref|ZP_02219610.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
gi|165916788|gb|EDR35392.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
Length = 250
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 20/132 (15%)
Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLL--------- 133
GY + GV+ +Y V + +I +G + R R G ++ LL
Sbjct: 85 GYTFASDWWIAGVKAQYQY-DNVRSVHIMDASLVGSTYRTRLGSHLTAMLLAGIKVNEAN 143
Query: 134 -LYATVG----PDVAQKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187
+Y G ++ G A + GG AG+G + ++ L Y + Y
Sbjct: 144 AVYLEAGYSTVWGKTTLFDPGPVAVSMKNRLNGGIAGIGWRHYFM-NNVFLDLSYDYALY 202
Query: 188 SKVEGFYNTISL 199
N+++L
Sbjct: 203 RSKS---NSVTL 211
>gi|330894843|gb|AEC47886.1| Omp1 [Moritella viscosa]
Length = 193
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 44/148 (29%), Gaps = 21/148 (14%)
Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSI---FAGYNVEDSCI 91
G + IA V D +G Y G A + + + G GY
Sbjct: 8 GALAAIALTTSVQANQDVSGFYLGGGAGSTTVNLDDAFDEDTDGKTLKFITGYQF---NR 64
Query: 92 MYGVEGDVRYTVPVL-------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144
+ +E + +++ S+ GY + L + +G
Sbjct: 65 IVAIEAQYTKYGEITPDKNITRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLD 124
Query: 145 KYETGKAGEITPIAIGGTA---GVGVEV 169
++ KA + TA G G+E
Sbjct: 125 LGQSSKALKDDNA----TAVHLGAGLEY 148
>gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 357
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 58/196 (29%), Gaps = 40/196 (20%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86
+ P + + Y G ++ G+ G G F GY
Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY-- 70
Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPD 141
+ G E + Y P D + G L + Y ++ L LY +G
Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGM 127
Query: 142 VAQKYETGKAGEITPIAIGGTAGV------GVEVGGLSESLVARLEYRA-SKYSKVEG-- 192
V + + A GV G E +++ R+EY+ S
Sbjct: 128 VWRADSSAFDATTGARANNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKATVG 186
Query: 193 ---FYNTISLGVGMKF 205
+S+GV +F
Sbjct: 187 ARPDNGMLSVGVSYRF 202
>gi|254673682|emb|CBA09282.1| Opacity protein and related surface antigens [Neisseria
meningitidis alpha275]
Length = 174
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Query: 126 YEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184
++ + Y + + G + + +IG GV ++ ++ YR
Sbjct: 91 FDTQSPVKPYLGARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSY-AVTPNVDLDASYRY 149
Query: 185 SKYSKVEGFYNT----ISLGVGMKF 205
+ KV N +S+GV +KF
Sbjct: 150 NYIGKVNTVKNVRSGELSVGVRVKF 174
>gi|153951167|ref|YP_001397651.1| major outer membrane protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152938613|gb|ABS43354.1| major outer membrane protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 440
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 56/165 (33%), Gaps = 19/165 (11%)
Query: 52 DF--NGPYAGLSAL----YNGSFGEEAHHNAGGSIFA-GYNVEDSCIMYGVEGDVRYTVP 104
++ G Y G S G G GSI A G++ + YG + V TV
Sbjct: 261 NWTIEGAYLGNSVDNRLEKEGKIGNGNFFALRGSIEANGWDASLGGLYYGEKDKVTTTVI 320
Query: 105 VLADNIHS---LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161
N+ S I + R + ++ Y T G + G GG
Sbjct: 321 EDQGNLDSLLAGQEIFNTTGSRLNGDTGRNIFGYVTGGYAFNETVRVGA-----EFIYGG 375
Query: 162 TAGVGVEVGGLSES----LVARLEYRASKYSKVEGFYNTISLGVG 202
T G S S VAR+ Y+ S FY+ ++L G
Sbjct: 376 TKSGSATYLGTSGSKKLEAVARVNYKYSPKLNFSAFYSYLNLDQG 420
>gi|23010810|ref|ZP_00051374.1| COG1024: Enoyl-CoA hydratase/carnithine racemase [Magnetospirillum
magnetotacticum MS-1]
Length = 109
Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSE 174
+R R GY D L+Y T G + A IG G GVE L++
Sbjct: 1 MRGRLGYAF-DRWLVYGTGGFAYGGGSRSPYAASYPYTLPDTARIGYALGGGVEY-ALTD 58
Query: 175 SLVARLEYRASKYSK 189
+ ++E +
Sbjct: 59 HISVKVEGLYVDLGR 73
>gi|332991681|gb|AEF01736.1| putative outer membrane protein A [Alteromonas sp. SN2]
Length = 192
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 9/132 (6%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVR-YTVPVLADNI 110
+G Y G + Y GE+ + GY + + G D Y + +
Sbjct: 31 SGFYVGGNYGYLRVEGEDDFDDDKDVWQGLVGYKFNEWVAVEGSFIDFGDYGNDIAGGDT 90
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
G +++ ++D LYA G ++ G G+
Sbjct: 91 D---GYTAAIKGTL--PITDRFSLYAKAGQLWSETEYNLGGVSSDYDDESLFVGAGLSY- 144
Query: 171 GLSESLVARLEY 182
++++ + EY
Sbjct: 145 AITKNFLVNAEY 156
>gi|323969105|gb|EGB64410.1| tia protein [Escherichia coli TA007]
Length = 248
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 44/228 (19%)
Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ + VS+LA+A SAQA AD + + +I T R DF
Sbjct: 1 MKKVIAVSALAMAGVFSAQALADRGKTGFYVTGKAGASIVTQTDQRFRQDF------GDD 54
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113
+Y G++ G + GY+ + + YG D RYT+ +
Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWHSPMGDG 114
Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160
R+ Y+ +S + +VG A+ + + + G
Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYTDTSWNESGDISD 174
Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194
+ G GV ++ + L YR K Y
Sbjct: 175 ISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221
>gi|322691606|ref|YP_004221176.1| hypothetical protein BLLJ_1417 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456462|dbj|BAJ67084.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 573
Score = 34.6 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 6/117 (5%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S L S Q PV + P + G Y + A
Sbjct: 16 VTMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAG 73
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + S ++Y D R A+ + + G SL
Sbjct: 74 VQSDGYRVAREFLTGSASAGWNGDSSALVYSGTPDFR----RRANTMSTPQGAESSL 126
>gi|164657929|ref|XP_001730090.1| hypothetical protein MGL_2472 [Malassezia globosa CBS 7966]
gi|159103985|gb|EDP42876.1| hypothetical protein MGL_2472 [Malassezia globosa CBS 7966]
Length = 1329
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 8/154 (5%)
Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-GPYAGLSALYNGSFG 69
S L + +AD ++ P + P R ++ G YAG
Sbjct: 810 SVLGDTPTGGSYSADAYGESYVPQELSEPVTSEYAEEPYRGNYAEGDYAGGEYAEGDDQA 869
Query: 70 EEAHHNAGGSIFAGYNVE----DSCIMYGVEGDVRYTVPVLAD---NIHSLHGIGGSLRI 122
+ A + G +A + + + G + Y + ++ G
Sbjct: 870 DYAEGDYAGGEYAEGDYQADYAEGNYAGGEYAEGDYAGDYAKEDYQGEYAEGDYTGGEYA 929
Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156
G Y+ + YA G GE T
Sbjct: 930 EGNYQGDYAEGDYAEGGYQGDYAEGDYAGGEYTE 963
>gi|91224159|ref|ZP_01259422.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|254228031|ref|ZP_04921461.1| outer membrane protein [Vibrio sp. Ex25]
gi|262395989|ref|YP_003287842.1| putative outer membrane protein [Vibrio sp. Ex25]
gi|91191070|gb|EAS77336.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|151939527|gb|EDN58355.1| outer membrane protein [Vibrio sp. Ex25]
gi|262339583|gb|ACY53377.1| putative outer membrane protein [Vibrio sp. Ex25]
Length = 204
Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 24/189 (12%)
Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96
P + + D NG G + E + G +F GY +E
Sbjct: 20 AAPYVGASVGQASFGDVNGSINGGGTNASTKLKLEDDSSLSGKVFGGYKF---NEYISLE 76
Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETG 149
+ + + S++ + + D L+A G ++ G
Sbjct: 77 AAIGGYDALDGKVVTVGDMKYLSIQPKATLPIGDRFNLFAKAGLSYFNAEFKISNSVIDG 136
Query: 150 KAG--EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-------SKYSK----VEGFYNT 196
AG I+ + G G+G E ++E+ ++E+ +K+ V+ N
Sbjct: 137 SAGHTTISDSTVTGMYGLGAEF-AITENFALQVEWEYMMPELDIAKFGNEKVTVDADINV 195
Query: 197 ISLGVGMKF 205
S+G+ +F
Sbjct: 196 FSVGMSYRF 204
>gi|89056585|ref|YP_512036.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1]
gi|88866134|gb|ABD57011.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1]
Length = 245
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 42/172 (24%)
Query: 49 IRHDFNGPYAGLSALY--------------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94
+ F G Y G+ A NG+ + H ++FAGY + + G
Sbjct: 20 AQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHATGATNLFAGYTTDLGIWVVG 79
Query: 95 VEGDVRYTVPVLADN-----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
E ++ ++ I +R G +++ LL+AT G +
Sbjct: 80 GEAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIAGQALTEDTLLFATAGLTAS 139
Query: 144 Q----------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
Q + E T +A G GVG E ++E R
Sbjct: 140 QYTYRGVRAVTNLGMGLGGASNTGPEETGMAYGFNIGVGAE-HRVTERFSFR 190
>gi|152969400|ref|YP_001334509.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238893868|ref|YP_002918602.1| outer membrane protein X [Klebsiella pneumoniae NTUH-K2044]
gi|262041098|ref|ZP_06014316.1| outer membrane protein X [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330010085|ref|ZP_08306684.1| outer membrane protein X [Klebsiella sp. MS 92-3]
gi|1279830|gb|AAA97932.1| OmpK17 [Klebsiella pneumoniae]
gi|150954249|gb|ABR76279.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238546184|dbj|BAH62535.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041548|gb|EEW42601.1| outer membrane protein X [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534636|gb|EGF61210.1| outer membrane protein X [Klebsiella sp. MS 92-3]
Length = 170
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 3/135 (2%)
Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130
+ N G Y E GV G YT N G + Y ++D
Sbjct: 39 QGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNNSNGTYNKGQYYGITAGPAYRLND 98
Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190
+Y VG + + G + G G++ + E++ Y S+ V
Sbjct: 99 WASIYGVVGVGYGKFQNNNYPHKSDMSDYGFSYGAGLQFNPI-ENVALDFSYEQSRIRNV 157
Query: 191 EGFYNTISLGVGMKF 205
+ T GVG +F
Sbjct: 158 DVG--TWIAGVGYRF 170
>gi|268590120|ref|ZP_06124341.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
gi|291314389|gb|EFE54842.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
Length = 363
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 44/193 (22%)
Query: 48 PIRHDFNGPYAGLSALYN-------------------GSFGEEAHHNA-GGSIFAGYNVE 87
P + + Y G ++ G+ G + G +AGY
Sbjct: 23 PKDNTW---YTGAKLGWSHYEDTSLNPAKTGTDYAGWGTVGNSTDRDTIGAGAYAGYQYN 79
Query: 88 DSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDV 142
G E + Y G SL + Y + D L +Y +G V
Sbjct: 80 Q---YLGFE--LGYDWFGKMKYKGAGNSGDLKSMGVSLTTKLSYPIMDDLDVYTRLGGMV 134
Query: 143 AQKYETGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYNT- 196
+ + T + +G+E ++ RL+Y+ S +
Sbjct: 135 YRTEAKAHQNGQRFKETDTGVAPVYALGLEY-AITPEWATRLDYQWVSNLGDKDNIGTRP 193
Query: 197 ----ISLGVGMKF 205
+S+GV +F
Sbjct: 194 DNGMLSVGVAYRF 206
>gi|312132348|ref|YP_003999687.1| protein [Bifidobacterium longum subsp. longum BBMN68]
gi|311773981|gb|ADQ03469.1| Hypothetical protein BBMN68_73 [Bifidobacterium longum subsp.
longum BBMN68]
Length = 576
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ S L S Q PV + P + G Y + A
Sbjct: 20 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 77
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + + ++Y D R A+ I + G SL
Sbjct: 78 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129
>gi|227546761|ref|ZP_03976810.1| lipoprotein lpqB precursor [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|227212723|gb|EEI80604.1| lipoprotein lpqB precursor [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 576
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 6/117 (5%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S L S Q PV + P + P G Y + A
Sbjct: 19 VTMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPADDAQPEIIV-KGFYDAMPAG 76
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + S ++Y D R A+ + + G SL
Sbjct: 77 VQSDGYRVAREFLTGSASAGWNGDSSALVYSGTPDFR----RRANTMSTPQGAESSL 129
>gi|194333987|ref|YP_002015847.1| outer surface protein, putative [Prosthecochloris aestuarii DSM
271]
gi|194311805|gb|ACF46200.1| outer surface protein, putative [Prosthecochloris aestuarii DSM
271]
Length = 201
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 72/232 (31%), Gaps = 61/232 (26%)
Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61
+KL + S A+ F SA A PYAGL+
Sbjct: 3 RKLLSGLTCSCCAIVFFQSAYAGS------------------------------PYAGLT 32
Query: 62 AL--YNGSF---GEEAHHNAGGSIFAGYNVEDSCIM--YGVEGDVRYTVPVLADNIHSLH 114
Y + G ++ GY + + +EG++ Y +
Sbjct: 33 VGKAYLNNSSIKGSNREYSCDDG--EGYCYAHGLELGNFRLEGEIGYQKNDFDAIEPGVR 90
Query: 115 GIGG-----SLRIRGGYEVS---DSLLLYATVGPDVAQKY--ETGKAGEITPIAIGGTAG 164
G SL G Y +S ++ + G VA + A + + + + G
Sbjct: 91 TANGDLSILSLLGNGYYSLSAQGSRVMPVISAGVGVANIEFEDEVNAVDDSDLVLAYQVG 150
Query: 165 VGVEVGGLSESLVARLEYRASKYSK-----------VEGFYNTISLGVGMKF 205
G+ LSES+ YR S V+ + I +GV + F
Sbjct: 151 AGLGY-KLSESVTVTTMYRYFSTSDAGFDEEADDLHVDISSHNIMMGVKVNF 201
>gi|317481678|ref|ZP_07940712.1| sporulation and spore germination [Bifidobacterium sp. 12_1_47BFAA]
gi|316916910|gb|EFV38298.1| sporulation and spore germination [Bifidobacterium sp. 12_1_47BFAA]
Length = 573
Score = 34.6 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ S L S Q PV + P + G Y + A
Sbjct: 17 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 74
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + + ++Y D R A+ I + G SL
Sbjct: 75 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 126
>gi|296454573|ref|YP_003661716.1| hypothetical protein BLJ_1442 [Bifidobacterium longum subsp. longum
JDM301]
gi|296184004|gb|ADH00886.1| hypothetical protein BLJ_1442 [Bifidobacterium longum subsp. longum
JDM301]
Length = 576
Score = 34.6 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ S L S Q PV + P + G Y + A
Sbjct: 20 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 77
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + + ++Y D R A+ I + G SL
Sbjct: 78 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129
>gi|189438907|ref|YP_001953988.1| hypothetical protein BLD_0044 [Bifidobacterium longum DJO10A]
gi|226738497|sp|B3DPP6|LPQB_BIFLD RecName: Full=Lipoprotein lpqB; Flags: Precursor
gi|189427342|gb|ACD97490.1| Hypothetical protein BLD_0044 [Bifidobacterium longum DJO10A]
Length = 576
Score = 34.6 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ S L S Q PV + P + G Y + A
Sbjct: 20 TMTACSSPFGLPISGSVQTLAPVEQQAQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 77
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + + ++Y D R A+ I + G SL
Sbjct: 78 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129
>gi|209964069|ref|YP_002296984.1| heat resistant agglutinin 1, putative [Rhodospirillum centenum SW]
gi|209957535|gb|ACI98171.1| heat resistant agglutinin 1, putative [Rhodospirillum centenum SW]
Length = 217
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 33/172 (19%)
Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFAGY------------NVEDSCIMYGVEGDVRY 101
+GPY S Y+ S +E ++ I AGY + D I+ G G
Sbjct: 30 SGPYIRGSLGYSWSSEDEIDYSPLWGIGAGYRINPNLRVDLTADWRDRYIVEGGRGFAAG 89
Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG--------- 149
+P+ ++ + + G +++ + + Y G ++
Sbjct: 90 GLPINSEVDNRTLMVNAYYDF-GAFDLMGNRQQVRPYLGAGIGLSTTKVDDVDVIIADQN 148
Query: 150 -----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196
+ + AG VE G L L YR KV+ T
Sbjct: 149 RLERFFGSDDDQFSWQLMAGAQVETG---NGLFFDLGYRYVDLGKVQLTSTT 197
>gi|168243829|ref|ZP_02668761.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450849|ref|YP_002045047.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194409153|gb|ACF69372.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205337212|gb|EDZ23976.1| attachment/invasion protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 174
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 8/126 (6%)
Query: 84 YNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142
YN ED +G G V Y + V SL + Y +D L Y +G
Sbjct: 53 YNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAAN 112
Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS---KVEGFYNTISL 199
+ A G G+++ + E++ Y + +S + T L
Sbjct: 113 GHIKDNWG-NSDNKTAFAY--GAGIQLNPV-ENIAVNASYEHTSFSTDADSDVKAGTWVL 168
Query: 200 GVGMKF 205
GVG F
Sbjct: 169 GVGYSF 174
>gi|148976914|ref|ZP_01813569.1| hypothetical outer membrane protein OmpA [Vibrionales bacterium
SWAT-3]
gi|145963788|gb|EDK29048.1| hypothetical outer membrane protein OmpA [Vibrionales bacterium
SWAT-3]
Length = 180
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVR-YTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131
+ +F GY++ D+ + G + Y + +A + L+ G V+DS
Sbjct: 51 DSDTSYGLFVGYHIVDTLAIEGGYNYLGEYDLKDIAGGSYEASSFDVVLKASG--NVTDS 108
Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR-ASKYSKV 190
L LYA G V G E + T G E ++ ++ +EY+ V
Sbjct: 109 LALYAKGGFAVYDWKANGPGVESDDSGVTPTIAFGSEYS-ITSAMKVGIEYQLYQDIGGV 167
Query: 191 EGFYNTISL 199
+ ++L
Sbjct: 168 DIDSFNVAL 176
>gi|328473467|gb|EGF44315.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
Length = 319
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + + F GY D +E V
Sbjct: 23 YVGGKMGKSWLEDACVAGQSCDKDGSTLGAFVGYEFND---YIALEAGFD-NVGDFDQTS 78
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
H +L + ++ + LY VG G+ +G GVE
Sbjct: 79 FGGHVEAITLAPKFSLPITQDIALYGKVGGAY-----VMFDGKDDYSYLG---AAGVEFN 130
Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
LS+++ AR EY+ + S + N+ +LGV KF
Sbjct: 131 -LSQNVTARAEYQTITDISNNVSKAAGNSATLGVSFKF 167
>gi|157369727|ref|YP_001477716.1| outer membrane protein X [Serratia proteamaculans 568]
gi|157321491|gb|ABV40588.1| virulence-related outer membrane protein [Serratia proteamaculans
568]
Length = 172
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 5/124 (4%)
Query: 84 YNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143
Y E GV G + ++N + S+ Y +D +Y VG
Sbjct: 52 YRYEFDNNPLGVIGSFTHVEKNGSENGYYGKAQYNSITAGPAYRFNDWASIYGVVGVGYG 111
Query: 144 QKYETGKAGEIT--PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGV 201
+ + + G G T G G++ + + + + Y S+ V+ ++ GV
Sbjct: 112 KNIDNAQNGSDRNGSSDYGFTYGAGLQFNPIQD-VALDVGYEQSRIRSVDVGIWSV--GV 168
Query: 202 GMKF 205
G +F
Sbjct: 169 GYRF 172
>gi|260777303|ref|ZP_05886197.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606969|gb|EEX33243.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 196
Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 17/157 (10%)
Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119
+ Y ++ + +F GY D + +EG + + + +
Sbjct: 46 GNGSYKLDLEDD--DSTAAKLFVGYQFND---YFAIEGSLGGYDAIDGSYVSIGDMTFLA 100
Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179
+ +G + D L+ G ++ AI G G G E +S+++
Sbjct: 101 TQAKGILPIGDRFNLFVKGGIAYFGAEFKTSYATVSDEAITGMYGAGAEF-AISKNIKLS 159
Query: 180 LEYRA-----------SKYSKVEGFYNTISLGVGMKF 205
E+ ++ VE T+SLG+ F
Sbjct: 160 AEFDYIRPELEVVKIGNETLSVESDITTLSLGLSYHF 196
>gi|322689645|ref|YP_004209379.1| hypothetical protein BLIF_1462 [Bifidobacterium longum subsp.
infantis 157F]
gi|320460981|dbj|BAJ71601.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 573
Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%)
Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64
+ S L S Q PV + P + G Y + A
Sbjct: 17 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 74
Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + + ++Y D R A+ I + G SL
Sbjct: 75 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 126
>gi|46190305|ref|ZP_00206420.1| hypothetical protein Blon03001605 [Bifidobacterium longum DJO10A]
Length = 312
Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Query: 26 PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYN 85
P + G Y + A A GS AG+N
Sbjct: 5 APVEQQAQRVYTNPQGPAD-DAQPETIVKGFYDAMPAGVQSDGYRVAREFLTGSASAGWN 63
Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
+ + ++Y D R A+ I + G SL
Sbjct: 64 GDSAALVYSGTPDFR----RRANTISAPQGAESSL 94
>gi|254295038|ref|YP_003061061.1| TonB-dependent receptor [Hirschia baltica ATCC 49814]
gi|254043569|gb|ACT60364.1| TonB-dependent receptor [Hirschia baltica ATCC 49814]
Length = 911
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 59 GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE-GDVRYTVPVLADNIHSLHGI- 116
GL Y +F G A Y S Y E V Y + L++N +SL G
Sbjct: 761 GLEIGYRQAFDNLPSPFDGLGAEASYTYVSSDANYENELTGVSYGLEGLSENSYSLVGFY 820
Query: 117 -GGSLRIRGGYEVSDSLL 133
G ++ R Y D L
Sbjct: 821 EKGPVQARLAYTYRDPFL 838
>gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163]
gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium wasabiae WPP163]
Length = 361
Score = 34.6 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 69/220 (31%), Gaps = 35/220 (15%)
Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62
+ ++ALASF + AQAA + GG+ V + G Y
Sbjct: 1 MKKTAIAVAVALASFATIAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GN 47
Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122
Y G G F GY + G E + + + S +
Sbjct: 48 GYTGVVNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSDTNAADSASFKA 104
Query: 123 -------RGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171
+ Y V L +Y +G + +G + A VG+E
Sbjct: 105 QGIQLATKLSYPVMPDLDVYTRLGGLVWRTDSHADRSGTHLNNNDTGVSPLAAVGIEY-A 163
Query: 172 LSESLVARLEYRAS----KYSKVEGFYNTI--SLGVGMKF 205
+ ++ R++Y+ V + + S+G+ +F
Sbjct: 164 IDKNWATRVDYQWVSNIGDAGTVGARPDNLLMSVGLSYRF 203
>gi|255599812|ref|XP_002537315.1| conserved hypothetical protein [Ricinus communis]
gi|223516758|gb|EEF25067.1| conserved hypothetical protein [Ricinus communis]
Length = 152
Score = 34.6 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR-------- 121
+ + A G IF GY + + +GVE YT +D ++ +G+ GS R
Sbjct: 52 DSDGYKASGKIFGGYEFDQN---WGVEA--GYTDFRNSDFNYTANGVNGSGRTKGNSYYV 106
Query: 122 -IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160
+ V+D +Y +G +++ A + G
Sbjct: 107 AGKYNVPVNDQFSVYGKLGLQHSERKLESAALNLKDTDTG 146
>gi|225025701|ref|ZP_03714893.1| hypothetical protein EIKCOROL_02603 [Eikenella corrodens ATCC
23834]
gi|224941482|gb|EEG22691.1| hypothetical protein EIKCOROL_02603 [Eikenella corrodens ATCC
23834]
Length = 193
Score = 34.6 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 16/93 (17%)
Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSES 175
++++ + Y + + T +G AGVG + ++++
Sbjct: 104 FDLNAPVKPYVGGRVALNRVSFDTTENGTGYTEHYHHRETKTGVGIVAGVGYD---ITQN 160
Query: 176 LVARLEYRASKYSKVEG---FYNTISLGVGMKF 205
+ YR + + K +G + +S GV +KF
Sbjct: 161 IALDAGYRYNYWGKFDGVKVDSHEVSAGVRVKF 193
>gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 356
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 64/204 (31%), Gaps = 42/204 (20%)
Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF---------------GEEAHHNAGGSIFAGYN 85
+AT + + YAG A + G+ ++ IFAGY
Sbjct: 18 VATIVQAAPQAN--TFYAGAKAGWASVRHGLNQYQYEQDGTVVGKAKKNSEAYGIFAGYQ 75
Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145
+ D+ + A + G SL ++ Y V +L LYA G + +
Sbjct: 76 ITDNFAVEAGYEFFGRGKVKEATGEKRITAHGSSLSLKASYPVLHNLDLYARAGAALIRV 135
Query: 146 YETGKAGEITPIAIGGTA----GVGVEVGGLSESLVARLEY----RASKYSKVEGFYN-- 195
T G+E L E L RLEY R + K E N
Sbjct: 136 DYKDNTFGETHKFHDLKVSPVFAGGLEYAILPE-LALRLEYQWVSRVGNFGKAERKANYY 194
Query: 196 --------------TISLGVGMKF 205
+++LG+ +F
Sbjct: 195 ENNESDVRYSPDIGSVALGLSYRF 218
>gi|148273952|ref|YP_001223513.1| putative exporter [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|147831882|emb|CAN02852.1| conserved membrane protein, putative exporter [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 342
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGY 84
++ Y GL+ ++ G + + GG FAGY
Sbjct: 41 WSAFYIGLALIFGVGIGFTSGWDFGGQYFAGY 72
>gi|28897538|ref|NP_797143.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|153839084|ref|ZP_01991751.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|260364598|ref|ZP_05777200.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260878297|ref|ZP_05890652.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260898127|ref|ZP_05906623.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260901940|ref|ZP_05910335.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28805750|dbj|BAC59027.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747422|gb|EDM58382.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|308086135|gb|EFO35830.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308090168|gb|EFO39863.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308106787|gb|EFO44327.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308115125|gb|EFO52665.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 319
Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110
Y G + + + F GY D +E V
Sbjct: 23 YVGGKMGKSWLEDACVAGQSCDKDGSTLGAFVGYEFND---YIALEAGFD-NVGDFDQTS 78
Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170
H +L + ++ + LY VG G+ +G GVE
Sbjct: 79 FGGHVEAITLAPKFSLPITQDIALYGKVGGAY-----VMFDGKDDYSYLG---AAGVEFN 130
Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205
LS+++ AR EY+ + S + N+ +LGV KF
Sbjct: 131 -LSQNVTARAEYQTITDISNNVSKAAGNSATLGVSFKF 167
>gi|23464660|ref|NP_695263.1| hypothetical protein BL0032 [Bifidobacterium longum NCC2705]
gi|81754697|sp|Q8G849|LPQB_BIFLO RecName: Full=Lipoprotein lpqB; Flags: Precursor
gi|23325220|gb|AAN23899.1| hypothetical protein BL0032 [Bifidobacterium longum NCC2705]
Length = 576
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 6/117 (5%)
Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63
+ + S L S Q PV + P + G Y + A
Sbjct: 19 VTMTACSSPFDLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAG 76
Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120
A GS AG+N + + ++Y D R A+ I + G SL
Sbjct: 77 VQSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.309 0.137 0.395
Lambda K H
0.267 0.0416 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,895,005,250
Number of Sequences: 14124377
Number of extensions: 164046863
Number of successful extensions: 748136
Number of sequences better than 10.0: 3959
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 3554
Number of HSP's that attempted gapping in prelim test: 722381
Number of HSP's gapped (non-prelim): 19212
length of query: 205
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 73
effective length of database: 2,978,375,866
effective search space: 217421438218
effective search space used: 217421438218
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 78 (34.6 bits)