BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780598|ref|YP_003065011.1| outer membrane protein [Candidatus Liberibacter asiaticus str. psy62] (205 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780598|ref|YP_003065011.1| outer membrane protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040275|gb|ACT57071.1| outer membrane protein [Candidatus Liberibacter asiaticus str. psy62] Length = 205 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL Sbjct: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL Sbjct: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL Sbjct: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 Query: 181 EYRASKYSKVEGFYNTISLGVGMKF 205 EYRASKYSKVEGFYNTISLGVGMKF Sbjct: 181 EYRASKYSKVEGFYNTISLGVGMKF 205 >gi|315121798|ref|YP_004062287.1| outer membrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495200|gb|ADR51799.1| outer membrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 231 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 95/232 (40%), Positives = 132/232 (56%), Gaps = 28/232 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAAD----PVRRAHHG-GRGVVPTIAT-NRYVPIRHDFN 54 M+K FLAVGVS+L L SF + QAAD P RR H RGVVPT+ + NRYV + Sbjct: 1 MKKFFLAVGVSTLTLVSFSAVQAADAVQRPQRRQHASVSRGVVPTVVSANRYVYSQQGIE 60 Query: 55 GPYAGLSALYNGSF-GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD----- 108 GPYAG+S + +F G++ + + GGS+FAGYNV++ YG E D RY+ + + Sbjct: 61 GPYAGMSIFHERNFSGKDHNKDIGGSLFAGYNVQEGDFFYGAEADARYSHDIASKEHKAA 120 Query: 109 -----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 ++ GSLR RGGYE++ +++Y TVG K A Sbjct: 121 RLDQKDDAAVSKMYHAADFSGSLRFRGGYEIAAPVVVYGTVGVAAVHKASKAPADAAASP 180 Query: 158 A----IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 A IGGTAG+GVE L ++++ R+EYRA+KYS V N +SLG+G++F Sbjct: 181 AKAFYIGGTAGLGVE-SVLVDNIIGRVEYRATKYSGVSHLQNVVSLGLGIRF 231 >gi|190891163|ref|YP_001977705.1| outer membrane protein [Rhizobium etli CIAT 652] gi|190696442|gb|ACE90527.1| outer membrane protein [Rhizobium etli CIAT 652] Length = 211 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 26/221 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58 M+ L + S+ A+A AQAAD V + VP + P++ ++ G Y Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQ--------VPEAPVAQDAPVKPAGNWEGFYL 52 Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115 G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GS+R R GY++ + LLY T G + + + + A G T G GVE ++ + Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNN 170 Query: 176 LVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205 + RLEYR + Y + G+ N++ LG+G+KF Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248] Length = 211 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 26/221 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58 M+ L + S A+A +AQAAD V + VP + P++ + G Y Sbjct: 1 MRVLIAGLMASVFAIAGVSAAQAADRVDQ--------VPEAPVAQEAPVKPAGSWEGFYL 52 Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115 G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYG 112 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GS+R R GY++ + LLY T G + + + + G T G GVE ++ + Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNN 170 Query: 176 LVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205 + RLEYR + Y + G+ N++ LG+G+KF Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|327193361|gb|EGE60264.1| outer membrane protein [Rhizobium etli CNPAF512] Length = 211 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 26/221 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58 M+ L + S+ A+A AQAAD V + VP + P++ ++ G Y Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQ--------VPEAPVAQDAPVKPAGNWEGFYL 52 Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115 G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GS+R R GY++ + LLY T G + + + + G T G GVE ++ + Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTNYGYTVGAGVEA-FVTNN 170 Query: 176 LVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205 + RLEYR + Y + G+ N++ LG+G+KF Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|110634323|ref|YP_674531.1| OmpA-like transmembrane region [Mesorhizobium sp. BNC1] gi|110285307|gb|ABG63366.1| OmpA-like transmembrane region [Chelativorans sp. BNC1] Length = 216 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 16/168 (9%) Query: 53 FNGPYAGLSALY--------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-V 103 + GPYAG++ Y +G+ GE G++F G+ + +YGVEGD+ Y + Sbjct: 50 WAGPYAGIALGYGFSGEVSADGAPGEVETDGFVGNVFGGWQGQSGQFVYGVEGDIGYNGM 109 Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163 + HG+ GSLR R GY +D++LLYAT G ++ +G + A+G TA Sbjct: 110 EGSEGGVDVEHGVDGSLRARLGYAATDNVLLYATGGGAASRLEASGGGLTESETAVGWTA 169 Query: 164 GVGVEVGGLSESLVARLEYRASKYS------KVEGFYNTISLGVGMKF 205 G GV+V L+ ARLEYR + S V+ N + LGVGM+F Sbjct: 170 GAGVDV-KLTPKSFARLEYRYTDLSAEFDSVDVDTTSNKVMLGVGMQF 216 >gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84] gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84] Length = 210 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 23/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + VS+ A+ F +A AAD V + P +A P ++++G Y G Sbjct: 1 MRTLIKTLMVSAFAIGGFNAAYAADAVEQIPQ------PPVA-QEAAPAINNWSGFYIGG 53 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIG 117 + +N G F + + GG F GYN + I+YGVE D+ Y + + + + +G+ Sbjct: 54 AGDWNKGHFSRNGNGYGFGGEAFTGYNWQQGQIVYGVEADLGYAGIDSTRNGLTAKNGVN 113 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY+ + +LY T G + Q + + A+G T G G E ++ ++ Sbjct: 114 GSVRGRLGYDF-NPFMLYGTAGLAIGQNKLSDDTSSDSKTAVGYTVGAGAET-FITNNVT 171 Query: 178 ARLEYRASKYSK----------VEGF-YNTISLGVGMKF 205 ARLEYR + Y K G+ ++ +G+G+KF Sbjct: 172 ARLEYRYTDYGKKNFDLDSGNFSRGYDEQSVKVGIGVKF 210 >gi|260469600|ref|ZP_05813765.1| OmpA domain protein transmembrane region-containing protein [Mesorhizobium opportunistum WSM2075] gi|259028626|gb|EEW29937.1| OmpA domain protein transmembrane region-containing protein [Mesorhizobium opportunistum WSM2075] Length = 217 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 31/219 (14%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 LAV + AL +A AAD V+ P A +P+ + GPYAG++ Y Sbjct: 11 LAVALGLFALGG--TAYAADVVQEEP-------PAPAPVAELPVAS-WAGPYAGINLGY- 59 Query: 66 GSFGEEAHHNAG---------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHG 115 G G + G GS+F GY + +YG E ++ Y DN +HS G Sbjct: 60 GFSGRTKEKDLGFETDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGVHSKGG 119 Query: 116 IGGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 GSLR R GY V+ +LLY T G + K E G T +G TAG+G ++ L++ Sbjct: 120 FEGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDTFGSDTATMLGWTAGLGTDI-KLTD 178 Query: 175 SLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205 ++ R+EYR + + KV+ N ++ G+GMKF Sbjct: 179 NVFGRVEYRYTDFGSKSFDNIGKVKATDNRVTFGLGMKF 217 >gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56] Length = 211 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 16/179 (8%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98 IA + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D Sbjct: 35 IAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESD 94 Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 + Y+ V + + + +G GS+R R GY++ + LLY T G + + + + Sbjct: 95 LGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKT 153 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205 A G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G+KF Sbjct: 154 AYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 211 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 18/184 (9%) Query: 38 VPTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMY 93 +P + P++ ++ G Y G + YN G FG + H + GG +F GYN + I+Y Sbjct: 30 IPEAPVAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVY 89 Query: 94 GVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152 GVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G + + Sbjct: 90 GVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTS 148 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGV 201 + + G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+ Sbjct: 149 DESKTNFGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGI 207 Query: 202 GMKF 205 G+KF Sbjct: 208 GVKF 211 >gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae] Length = 211 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 18/183 (9%) Query: 39 PTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYG 94 P + P++ ++ G Y G + YN G FG + H + GG +F GYN + I+YG Sbjct: 31 PEAPVAQEAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYG 90 Query: 95 VEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153 VE D+ Y+ V + + + +G GS+R R GY++ + LLY T G + + + Sbjct: 91 VESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSD 149 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVG 202 + G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G Sbjct: 150 ESKTNFGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIG 208 Query: 203 MKF 205 +KF Sbjct: 209 VKF 211 >gi|218663696|ref|ZP_03519626.1| outer membrane protein [Rhizobium etli IE4771] Length = 203 Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 92/179 (51%), Gaps = 16/179 (8%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98 +A + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D Sbjct: 27 VAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESD 86 Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 + Y+ V + + + +G GS+R R GY++ + LLY T G + + + + Sbjct: 87 LGYSGDDVSSGGVENKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKT 145 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205 A G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G+KF Sbjct: 146 AYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 203 >gi|209548691|ref|YP_002280608.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534447|gb|ACI54382.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 211 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 18/184 (9%) Query: 38 VPTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMY 93 +P + P++ + G Y G + YN G FG + H + GG +F GYN + I+Y Sbjct: 30 IPEAPVAQEAPVKPAGSWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVY 89 Query: 94 GVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152 GVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G + + Sbjct: 90 GVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTS 148 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGV 201 + + G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+ Sbjct: 149 DESKTNYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGI 207 Query: 202 GMKF 205 G+KF Sbjct: 208 GVKF 211 >gi|319784400|ref|YP_004143876.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170288|gb|ADV13826.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 220 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 36/223 (16%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 LAV + AL+ +A AAD V P A +P+ + GPYAGL+ Y Sbjct: 11 LAVALGLFALSG--TAYAADVVSEEP-------PAPAPIAELPVAS-WAGPYAGLNVGY- 59 Query: 66 GSFGEEAHHNAG------------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN--IH 111 G G + G GS+F GY + +YG E ++ Y V D+ ++ Sbjct: 60 GFSGHTKEKDLGVDNVDVGTKGFVGSVFGGYQWQQENFVYGAEAELGYN-GVKGDDSGVN 118 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 S G GSLR R GY V+ +LLY T G + K E G +G TAG+G ++ Sbjct: 119 SKAGFEGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDVYGSDRATLLGWTAGLGTDI- 177 Query: 171 GLSESLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205 L++++ R+EYR + + KV+ N ++ GVGMKF Sbjct: 178 KLTDNVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 220 >gi|86357119|ref|YP_469011.1| outer membrane protein [Rhizobium etli CFN 42] gi|86281221|gb|ABC90284.1| outer membrane protein [Rhizobium etli CFN 42] Length = 211 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 16/179 (8%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98 +A + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D Sbjct: 35 VAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESD 94 Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 + Y+ V + + + +G GS+R R GY++ + LLY T G + + + + Sbjct: 95 LGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTSDESKT 153 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE----------GF-YNTISLGVGMKF 205 G T G GVE ++ ++ RLEYR + Y + G+ N++ LG+G+KF Sbjct: 154 NYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|3914201|sp|Q45110|OM25_BRUCA RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457931|gb|AAB36692.1| 25 kDa outer membrane protein [Brucella canis] Length = 213 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 36/227 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEV 169 G GSLR R GY++ + ++ Y T G +Q K G GE + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDGE-SKFRVGWTAGAGLEA 167 Query: 170 GGLSESLVARLEYRASKYSK---------VEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++YS V +T I +G+G KF Sbjct: 168 -KLTDNILGRVEYRYTQYSNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|13476553|ref|NP_108123.1| outer membrane protein [Mesorhizobium loti MAFF303099] gi|14027314|dbj|BAB54268.1| outer membrane protein [Mesorhizobium loti MAFF303099] Length = 218 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 30/219 (13%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY- 64 LAV + AL +A AAD V+ P A +P+ + GPYAGL+ Y Sbjct: 11 LAVALGLFALGG--TAYAADVVQEEP-------PAPAPVAELPVAS-WAGPYAGLNVGYG 60 Query: 65 -NGSFGEEAHHNAG------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116 +G E+ + GS+F GY + +YG E ++ Y DN I+S G Sbjct: 61 FSGRTKEKDFDVSTDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGINSKAGF 120 Query: 117 GGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSE 174 GSLR R GY V+ +LLY T G + K E G +G TAGVG ++ L++ Sbjct: 121 EGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDTVLGVSDRATMLGWTAGVGTDI-KLTD 179 Query: 175 SLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205 ++ R+EYR + + KV+ N ++ GVGMKF Sbjct: 180 NVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 218 >gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4] gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4] Length = 212 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 29/223 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTI--ATNRYVPIRHDFNGPYA 58 M+ L + + SS L+ A AAD V VP A + P+ ++ G Y Sbjct: 1 MRTLVMILLASSAGLSLVTGAHAADAVMS--------VPEAPAAVDMPAPV-SNWAGAYV 51 Query: 59 GLSALYNGSFGEEAHHNA---GGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSL 113 G + Y + +A GG ++ GYN+++ I+YG E D+ Y ++ Sbjct: 52 GGAGTYTMGRSHGSKFSARAFGGQVYGGYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGK 111 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 G+ GS+R R GY++ + ++Y T G A +G G + A+G T G GVE ++ Sbjct: 112 QGVNGSIRGRVGYDL-NPFMVYGTAGVAAADTKISGAGGSDSKAALGYTVGAGVEA-MVT 169 Query: 174 ESLVARLEYRASKY---------SKV-EGFYN-TISLGVGMKF 205 ++ R+EYR + Y SKV GF + ++ +G+GMKF Sbjct: 170 NNITTRVEYRYTDYQNKDYNIGGSKVSRGFDDQSVKVGIGMKF 212 >gi|218508536|ref|ZP_03506414.1| outer membrane protein [Rhizobium etli Brasil 5] Length = 144 Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 14/144 (9%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--DFNGPYA 58 M+ L + S+ A+A AQAAD V + VP + P++ ++ G Y Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQ--------VPEAPVAQDAPVKPAGNWEGFYL 52 Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHG 115 G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112 Query: 116 IGGSLRIRGGYEVSDSLLLYATVG 139 GS+R R GY++ + LLY T G Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAG 135 >gi|148560659|ref|YP_001258682.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840] gi|3914204|sp|Q45335|OM25_BRUO2 RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457929|gb|AAB06702.1| 25 kDa outer membrane protein [Brucella ovis] gi|148371916|gb|ABQ61895.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840] Length = 201 Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 26/216 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEG+ Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY-SKVEGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y +K++ I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKLDT--QDIRVGIGYKF 201 >gi|254718838|ref|ZP_05180649.1| OmpA-like transmembrane domain protein [Brucella sp. 83/13] gi|265983822|ref|ZP_06096557.1| outer-membrane immunogenic protein [Brucella sp. 83/13] gi|306838760|ref|ZP_07471594.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653] gi|306843662|ref|ZP_07476262.1| OmpA-like transmembrane domain protein [Brucella sp. BO1] gi|206596726|emb|CAQ68393.1| outer membrane protein 25 [Brucella sp. BO1] gi|264662414|gb|EEZ32675.1| outer-membrane immunogenic protein [Brucella sp. 83/13] gi|306275972|gb|EFM57681.1| OmpA-like transmembrane domain protein [Brucella sp. BO1] gi|306406162|gb|EFM62407.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653] Length = 213 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTNVRNKLDTQDIRVGIGYKF 213 >gi|23501588|ref|NP_697715.1| outer-membrane protein Omp25 [Brucella suis 1330] gi|62289663|ref|YP_221456.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941] gi|82699590|ref|YP_414164.1| OmpA-like transmembrane domain-containing protein [Brucella melitensis biovar Abortus 2308] gi|163842972|ref|YP_001627376.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis ATCC 23445] gi|254688973|ref|ZP_05152227.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 6 str. 870] gi|254697107|ref|ZP_05158935.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 2 str. 86/8/59] gi|254701484|ref|ZP_05163312.1| OmpA-like transmembrane domain protein [Brucella suis bv. 5 str. 513] gi|254704031|ref|ZP_05165859.1| OmpA-like transmembrane domain protein [Brucella suis bv. 3 str. 686] gi|254707067|ref|ZP_05168895.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis M163/99/10] gi|254709823|ref|ZP_05171634.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis B2/94] gi|254713826|ref|ZP_05175637.1| OmpA-like transmembrane domain protein [Brucella ceti M644/93/1] gi|254717116|ref|ZP_05178927.1| OmpA-like transmembrane domain protein [Brucella ceti M13/05/1] gi|254730003|ref|ZP_05188581.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 4 str. 292] gi|256031313|ref|ZP_05444927.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis M292/94/1] gi|256159433|ref|ZP_05457205.1| OmpA-like transmembrane domain protein [Brucella ceti M490/95/1] gi|256254721|ref|ZP_05460257.1| OmpA-like transmembrane domain protein [Brucella ceti B1/94] gi|256257221|ref|ZP_05462757.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 9 str. C68] gi|256369135|ref|YP_003106643.1| outer-membrane protein Omp25 [Brucella microti CCM 4915] gi|260168451|ref|ZP_05755262.1| OmpA-like transmembrane domain protein [Brucella sp. F5/99] gi|260545586|ref|ZP_05821327.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038] gi|260754463|ref|ZP_05866811.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260757682|ref|ZP_05870030.1| outer-membrane protein [Brucella abortus bv. 4 str. 292] gi|260761509|ref|ZP_05873852.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883492|ref|ZP_05895106.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str. C68] gi|261218931|ref|ZP_05933212.1| outer membrane protein [Brucella ceti M13/05/1] gi|261221901|ref|ZP_05936182.1| outer-membrane immunogenic protein [Brucella ceti B1/94] gi|261314536|ref|ZP_05953733.1| outer membrane protein [Brucella pinnipedialis M163/99/10] gi|261317361|ref|ZP_05956558.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94] gi|261321570|ref|ZP_05960767.1| outer membrane protein Omp25 [Brucella ceti M644/93/1] gi|261752028|ref|ZP_05995737.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513] gi|261754686|ref|ZP_05998395.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686] gi|261757914|ref|ZP_06001623.1| outer-membrane immunogenic protein [Brucella sp. F5/99] gi|265988399|ref|ZP_06100956.1| outer-membrane immunogenic protein [Brucella pinnipedialis M292/94/1] gi|265997865|ref|ZP_06110422.1| outer-membrane protein [Brucella ceti M490/95/1] gi|3914205|sp|Q45689|OM25_BRUSU RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|68067868|sp|Q44664|OM25_BRUAB RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457937|gb|AAB36695.1| 25 kDa outer membrane protein [Brucella suis 1330] gi|23347502|gb|AAN29630.1| outer-membrane protein Omp25 [Brucella suis 1330] gi|46251178|gb|AAS84560.1| Omp25 [Brucella ceti] gi|46251180|gb|AAS84561.1| Omp25 [Brucella ceti] gi|46251182|gb|AAS84562.1| Omp25 [Brucella pinnipedialis] gi|46251184|gb|AAS84563.1| Omp25 [Brucella ceti] gi|62195795|gb|AAX74095.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941] gi|82615691|emb|CAJ10678.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus 2308] gi|157310307|emb|CAN43865.1| outer membrane protein 25 [Brucella microti CCM 4915] gi|157310309|emb|CAN43866.1| outer membrane protein 25 [Brucella microti] gi|163673695|gb|ABY37806.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis ATCC 23445] gi|255999295|gb|ACU47694.1| outer-membrane protein Omp25 [Brucella microti CCM 4915] gi|260096993|gb|EEW80868.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038] gi|260668000|gb|EEX54940.1| outer-membrane protein [Brucella abortus bv. 4 str. 292] gi|260671941|gb|EEX58762.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674571|gb|EEX61392.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260873020|gb|EEX80089.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str. C68] gi|260920485|gb|EEX87138.1| outer-membrane immunogenic protein [Brucella ceti B1/94] gi|260924020|gb|EEX90588.1| outer membrane protein [Brucella ceti M13/05/1] gi|261294260|gb|EEX97756.1| outer membrane protein Omp25 [Brucella ceti M644/93/1] gi|261296584|gb|EEY00081.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94] gi|261303562|gb|EEY07059.1| outer membrane protein [Brucella pinnipedialis M163/99/10] gi|261737898|gb|EEY25894.1| outer-membrane immunogenic protein [Brucella sp. F5/99] gi|261741781|gb|EEY29707.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513] gi|261744439|gb|EEY32365.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686] gi|262552333|gb|EEZ08323.1| outer-membrane protein [Brucella ceti M490/95/1] gi|264660596|gb|EEZ30857.1| outer-membrane immunogenic protein [Brucella pinnipedialis M292/94/1] Length = 213 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|161618670|ref|YP_001592557.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis ATCC 23365] gi|161335481|gb|ABX61786.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis ATCC 23365] Length = 213 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|254693454|ref|ZP_05155282.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 3 str. Tulya] gi|261213709|ref|ZP_05927990.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|260915316|gb|EEX82177.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] Length = 213 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRTKLDTQDIRVGIGYKF 213 >gi|306842032|ref|ZP_07474705.1| OmpA-like transmembrane domain protein [Brucella sp. BO2] gi|306287873|gb|EFM59293.1| OmpA-like transmembrane domain protein [Brucella sp. BO2] Length = 213 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGLGYKF 213 >gi|256060827|ref|ZP_05450987.1| OmpA-like transmembrane domain protein [Brucella neotomae 5K33] gi|261324818|ref|ZP_05964015.1| outer-membrane protein Omp25 [Brucella neotomae 5K33] gi|3914203|sp|Q45326|OM25_BRUNE RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457935|gb|AAB36694.1| 25 kDa outer membrane protein [Brucella neotomae] gi|261300798|gb|EEY04295.1| outer-membrane protein Omp25 [Brucella neotomae 5K33] Length = 213 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|17987532|ref|NP_540166.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225852222|ref|YP_002732455.1| OmpA-like transmembrane domain-containing protein [Brucella melitensis ATCC 23457] gi|256044394|ref|ZP_05447298.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 1 str. Rev.1] gi|256264270|ref|ZP_05466802.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9] gi|260563745|ref|ZP_05834231.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. 16M] gi|265990813|ref|ZP_06103370.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. Rev.1] gi|3914202|sp|Q45321|OM25_BRUME RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457927|gb|AAB06701.1| 25 kDa outer membrane protein [Brucella melitensis] gi|17983234|gb|AAL52430.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225640587|gb|ACO00501.1| OmpA-like transmembrane domain protein [Brucella melitensis ATCC 23457] gi|260153761|gb|EEW88853.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. 16M] gi|263001597|gb|EEZ14172.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094531|gb|EEZ18340.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9] gi|326408721|gb|ADZ65786.1| OmpA-like transmembrane domain protein [Brucella melitensis M28] gi|326538444|gb|ADZ86659.1| OmpA-like transmembrane domain protein [Brucella melitensis M5-90] Length = 213 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 23/197 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY 187 L+++++ R+EYR ++Y Sbjct: 168 KLTDNILGRVEYRYTQY 184 >gi|189023912|ref|YP_001934680.1| OmpA-like transmembrane domain protein [Brucella abortus S19] gi|225627199|ref|ZP_03785237.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|237815152|ref|ZP_04594150.1| Porin subfamily protein [Brucella abortus str. 2308 A] gi|260566721|ref|ZP_05837191.1| outer membrane protein [Brucella suis bv. 4 str. 40] gi|189019484|gb|ACD72206.1| OmpA-like transmembrane domain protein [Brucella abortus S19] gi|225618034|gb|EEH15078.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|237789989|gb|EEP64199.1| Porin subfamily protein [Brucella abortus str. 2308 A] gi|260156239|gb|EEW91319.1| outer membrane protein [Brucella suis bv. 4 str. 40] Length = 305 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE-A 259 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305 >gi|297248070|ref|ZP_06931788.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5 str. B3196] gi|297175239|gb|EFH34586.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5 str. B3196] Length = 305 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE-A 259 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305 >gi|294852064|ref|ZP_06792737.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] gi|294820653|gb|EFG37652.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] Length = 305 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE-A 259 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305 >gi|163759157|ref|ZP_02166243.1| outer membrane protein [Hoeflea phototrophica DFL-43] gi|162283561|gb|EDQ33846.1| outer membrane protein [Hoeflea phototrophica DFL-43] Length = 212 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 14/133 (10%) Query: 85 NVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 N + I+YGVEGD+ Y+ + G GSLR R GY++ + LLYAT G Sbjct: 82 NWQSDNIVYGVEGDLGYSGADASLGGVTGEQGFNGSLRARLGYDI-NPFLLYATGGLAAT 140 Query: 144 QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK----------VEGF 193 + T AG T +G TAG G E ++E++ RLEYR + Y GF Sbjct: 141 RAEVTSAAGSDTNTHLGWTAGAGAEA-FVTENITTRLEYRYTDYGSETYNLGGTNVSSGF 199 Query: 194 YN-TISLGVGMKF 205 + ++ LG+GMKF Sbjct: 200 DDHSVRLGIGMKF 212 >gi|227821495|ref|YP_002825465.1| putative outer membrane protein [Sinorhizobium fredii NGR234] gi|227340494|gb|ACP24712.1| putative outer membrane protein [Sinorhizobium fredii NGR234] Length = 212 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%) Query: 38 VPTIATNRYV-PIRHDFNGPYAGLSALYNGSFGE-EAHHNA-----GGSIFAGYNVEDSC 90 +P Y P +++G Y G +A N +GE +A N GG ++ GYNV+D Sbjct: 30 IPAAPAAEYTEPAVKNWSGAYVGGTA--NWHYGEADATGNNKSVAFGGGLYGGYNVQDGQ 87 Query: 91 IMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG 149 ++YG E DV Y + G+ GSLR R G ++ + +L+Y T G + + Sbjct: 88 MVYGGEADVNYAGNDSTSSGRKVKQGVNGSLRGRVGVDM-NPVLVYGTAGLALGNAKLST 146 Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY---------SKVEGFYN--TIS 198 AG +G TAG G E +++++ AR+EYR + Y S V Y+ ++ Sbjct: 147 PAGSDDKTLVGWTAGAGAET-FVTDNVTARVEYRYTDYASKDFRAGGSTVSSGYDEHSVR 205 Query: 199 LGVGMKF 205 LG+G+KF Sbjct: 206 LGMGVKF 212 >gi|256113236|ref|ZP_05454104.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 3 str. Ether] gi|265994648|ref|ZP_06107205.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str. Ether] gi|262765761|gb|EEZ11550.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str. Ether] Length = 213 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 23/197 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY 187 L+++++ R+EYR ++Y Sbjct: 168 KLTDNILGRVEYRYTQY 184 >gi|159185080|ref|NP_355120.2| outer membrane protein [Agrobacterium tumefaciens str. C58] gi|159140353|gb|AAK87905.2| outer membrane protein [Agrobacterium tumefaciens str. C58] Length = 209 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 34/217 (15%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL---SALYNG 66 V+SL S +A AAD V P +A +P+ ++GPY G+ + NG Sbjct: 6 VTSLLALSASTAMAADAVYETP------APPVAQET-LPV-FTWSGPYLGIQGGAGWANG 57 Query: 67 SF---GEEAHHNAGGSI---FAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIG-- 117 F G + G I FAGYN + D+ ++ G+EGDV Y DN +S +G Sbjct: 58 DFSAGGPVVSDDFNGGILGAFAGYNYQFDNNMVLGIEGDVDYN---WNDNDYSGIKVGTD 114 Query: 118 --GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GS+R R GY D L+YAT G + + G+ G T G GV+ +++ Sbjct: 115 WQGSVRGRVGYAF-DHALIYATAGWTATRGFIETPVGDDKATFNGYTVGAGVDY-AFTDN 172 Query: 176 LVARLEYRASKYSKVEGF-------YNTISLGVGMKF 205 + RLEYR + Y + F +T+ +G+G+KF Sbjct: 173 VFGRLEYRYNDYGDKDIFGINTDFDQHTVKVGLGVKF 209 >gi|150396648|ref|YP_001327115.1| porin [Sinorhizobium medicae WSM419] gi|150028163|gb|ABR60280.1| porin [Sinorhizobium medicae WSM419] Length = 215 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 14/138 (10%) Query: 81 FAGYNVEDSCIMYGVEGDVRY-----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 FAGYN + + GVEGDV Y TV V N + GS+R R GY V+D LLY Sbjct: 79 FAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGTNTDVGTDVSGSVRARLGYTVNDRTLLY 138 Query: 136 ATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------ 188 AT G V + + + A + G T G GV+ G ++S+ R EYR + +S Sbjct: 139 ATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAEYRYNDFSDKDVGG 197 Query: 189 -KVEGFYNTISLGVGMKF 205 V+ + ++GVG+KF Sbjct: 198 VDVDLDQHQFTIGVGVKF 215 >gi|150396008|ref|YP_001326475.1| porin [Sinorhizobium medicae WSM419] gi|150027523|gb|ABR59640.1| porin [Sinorhizobium medicae WSM419] Length = 212 Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 35/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L + S++AL +F +A AAD V +P Y P +++G Y G Sbjct: 1 MRMLTTTLMASAMALVAFQAAHAADVVDE--------IPAAPAAEYTEPAVRNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS--- 112 + ++ + +N G ++ GYNV+D ++YG E D+ YT ++ HS Sbjct: 53 GTIDWHHGEADATGNNKSVGTGGGLYGGYNVQDGQMVYGGEADINYT----GNDSHSSGR 108 Query: 113 --LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G+ GS+R R G +V + +L+Y T G + AG +G TAGVG E Sbjct: 109 RVQQGLNGSVRARVGVDV-NPVLVYGTAGVALGNAELKTPAGSDDKTLVGWTAGVGAET- 166 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYN--TISLGVGMKF 205 +++++ AR EYR + Y + + Y+ + LG+G+KF Sbjct: 167 FVTDNITARAEYRYTDYGSKDFRTGGTTISSGYDEHAVKLGMGVKF 212 >gi|15964926|ref|NP_385279.1| outer membrane protein [Sinorhizobium meliloti 1021] gi|307300997|ref|ZP_07580766.1| porin [Sinorhizobium meliloti BL225C] gi|15074105|emb|CAC45752.1| Probable outer membrane protein [Sinorhizobium meliloti 1021] gi|306903952|gb|EFN34538.1| porin [Sinorhizobium meliloti BL225C] Length = 212 Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L + S++AL +F +A AAD V VP Y P +++G Y G Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLH 114 + ++ + +N G ++ GYNV+D ++YG E DV YT + Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYNVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++ Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170 Query: 175 SLVARLEYRASKY---------SKVEGFYN--TISLGVGMKF 205 ++ AR EYR + Y S + Y+ ++ LG+G+KF Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212 >gi|769745|emb|CAA55872.1| immunogenic protein [Brucella abortus] gi|89741444|gb|ABD77595.1| 25 kDa outer membrane protein [Brucella abortus] Length = 213 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSL R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLGARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 L+++++ R+EYR ++Y + V +T I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|307317731|ref|ZP_07597169.1| porin [Sinorhizobium meliloti AK83] gi|306896493|gb|EFN27241.1| porin [Sinorhizobium meliloti AK83] Length = 212 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L + S++AL +F +A AAD V VP Y P +++G Y G Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLH 114 + ++ + +N G ++ GY+V+D ++YG E DV YT + Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYDVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++ Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170 Query: 175 SLVARLEYRASKY---------SKVEGFYN--TISLGVGMKF 205 ++ AR EYR + Y S + Y+ ++ LG+G+KF Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212 >gi|15965438|ref|NP_385791.1| outer-membrane protein [Sinorhizobium meliloti 1021] gi|307310613|ref|ZP_07590260.1| porin [Sinorhizobium meliloti BL225C] gi|15074619|emb|CAC46264.1| Probable outer-membrane protein [Sinorhizobium meliloti 1021] gi|306899723|gb|EFN30349.1| porin [Sinorhizobium meliloti BL225C] Length = 215 Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 14/138 (10%) Query: 81 FAGYNVEDSCIMYGVEGDVRY-----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 FAGYN + + GVEGDV Y TV V + + + GS+R R GY V+D L+Y Sbjct: 79 FAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGSDTEAGTDVSGSVRARLGYTVNDRTLIY 138 Query: 136 ATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------ 188 AT G V + + + A + G T G GV+ G ++S+ R EYR + + Sbjct: 139 ATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAEYRYNDFGDKDVGG 197 Query: 189 -KVEGFYNTISLGVGMKF 205 V+ + ++GVG+KF Sbjct: 198 VNVDLDQHQFTVGVGVKF 215 >gi|239831535|ref|ZP_04679864.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301] gi|239823802|gb|EEQ95370.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301] Length = 266 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 37/219 (16%) Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 ++S AL F +A AAD ++ P + + ++ + G Y GL Y G Sbjct: 62 IASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGYG 110 Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGIGG 118 + N GSI +AG+N + +YGVEGD Y+ + N + G G Sbjct: 111 WNKVKTNTDGSIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKNGLEVKEGFEG 170 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 SLR R GY++ + ++ Y T G Q K + G E + +G TAG G+E L+++++ Sbjct: 171 SLRGRLGYDL-NPVMPYITAGVAGKQVKLDNGFDDE-SKFRVGWTAGAGLEA-KLTDNIL 227 Query: 178 ARLEYRASKYSK------VEGFYNT-----ISLGVGMKF 205 R+EYR +++ E N I +GVG KF Sbjct: 228 GRVEYRYTQFGNKTYDLGTESVRNKLDTHDIRVGVGYKF 266 >gi|153009914|ref|YP_001371129.1| porin [Ochrobactrum anthropi ATCC 49188] gi|151561802|gb|ABS15300.1| porin [Ochrobactrum anthropi ATCC 49188] Length = 213 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 37/219 (16%) Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 ++S AL F +A AAD ++ P + + ++ + G Y GL Y G Sbjct: 9 IASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGYG 57 Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118 +A + G++ +AG+N + +YGVEGD Y+ D + G G Sbjct: 58 WNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 117 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 SLR R GY++ + ++ Y T G +Q K + G E + +G TAG G+E L+++++ Sbjct: 118 SLRARLGYDL-NPVMPYITAGVAGSQVKLDNGFDDE-SKFRVGWTAGAGLEA-KLTDNIL 174 Query: 178 ARLEYRASKY---------SKVEGFYNT--ISLGVGMKF 205 R+EYR +++ V +T I +GVG KF Sbjct: 175 GRVEYRYTQFGNKTYDLGNESVRNKLDTHDIRVGVGYKF 213 >gi|307320995|ref|ZP_07600402.1| porin [Sinorhizobium meliloti AK83] gi|306893369|gb|EFN24148.1| porin [Sinorhizobium meliloti AK83] Length = 213 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 12/136 (8%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 FAGYN + + GVEGDV Y V + + + GS+R R GY V+D L+YAT Sbjct: 79 FAGYNYQHGDWVVGVEGDVSYNWNDETVFGSDTEAGTDVSGSVRARLGYTVNDRTLIYAT 138 Query: 138 VGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-------K 189 G V + + + A + G T G GV+ G ++S+ R EYR + + Sbjct: 139 GGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAEYRYNDFGDKDVGGVN 197 Query: 190 VEGFYNTISLGVGMKF 205 V+ + ++GVG+KF Sbjct: 198 VDLDQHQFTVGVGVKF 213 >gi|218513075|ref|ZP_03509915.1| outer membrane protein [Rhizobium etli 8C-3] Length = 134 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%) Query: 82 AGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 GYN + I+YGVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G Sbjct: 1 TGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGL 59 Query: 141 DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------- 191 + + + + A G T G GVE ++ ++ RLEYR + Y + Sbjct: 60 ALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFS 118 Query: 192 -GF-YNTISLGVGMKF 205 G+ N++ LG+G+KF Sbjct: 119 RGYDENSVKLGIGVKF 134 >gi|332717162|ref|YP_004444628.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3] gi|325063847|gb|ADY67537.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3] Length = 223 Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 32/196 (16%) Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSALY------NGSFGEEAHHNAGG---SIFAGYNV 86 G +P V ++G Y G SA Y + +FG H G S FAGYN Sbjct: 34 GDIPAAPVVNDVAPAFSWDGVYVGASAGYGWNRVKSTTFGVTTKHEFDGGRFSGFAGYNA 93 Query: 87 EDS-CIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 E + I+ GVEGD+ Y ++ + + G+ GS R+R GY + D L+Y G Sbjct: 94 EVAPSIILGVEGDLGYAWGDKTIVTSEVSA--GLNGSARLRAGYAI-DRALIYTAAGYTA 150 Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT------ 196 GE + + G T G GV+ + +L R+EYR + + K Y+T Sbjct: 151 TDSEVKAPFGEDSKVLHGWTVGAGVDY-AFTNNLFGRVEYRYNDFGKAT--YHTGPITST 207 Query: 197 -------ISLGVGMKF 205 + +G+G+KF Sbjct: 208 GDVSEHVVKVGLGVKF 223 >gi|325292505|ref|YP_004278369.1| outer membrane protein [Agrobacterium sp. H13-3] gi|325060358|gb|ADY64049.1| outer membrane protein [Agrobacterium sp. H13-3] Length = 218 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 40/230 (17%) Query: 3 KLFLAV-GVSSLALASFCSAQAADPVRRAHHGGRGVVPT--IATNRYVPIRHDFNGPYAG 59 ++F+A S++A A F +A AAD V VP +A ++ P+++ + G Y G Sbjct: 2 RIFVATIMASTIAAAGFSAAHAADAVND--------VPQAPVAYDQPAPVKN-WTGAYLG 52 Query: 60 LSALYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGVEGDV-----RYTVPVLA 107 +A Y+ +G + N G G I+ GYN+++ I+YG E DV R + + Sbjct: 53 GTANYD--WGRFSSSNDGRDAKGAGGGIYGGYNMQNGQIVYGAEADVNLGRERGSAGTVG 110 Query: 108 DN-IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 N + G+ GSLR R GY++ + LLY T G + + + A+G T G G Sbjct: 111 GNAVEGKQGVNGSLRARVGYDM-NPFLLYGTAGLAASDNKVRDATSKDSATALGYTVGAG 169 Query: 167 VEVGGLSESLVARLEYRASKYSKVE----------GFYN-TISLGVGMKF 205 VE +++++ ARLEYR S Y K + GF + ++ G+G+KF Sbjct: 170 VEA-MVTDNITARLEYRYSDYQKKDYSLDSGAFSRGFDDHSVKAGIGVKF 218 >gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506] gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506] Length = 228 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 19/190 (10%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72 LA + AA P + P P ++GPYAG YN S + Sbjct: 14 LATIALALPLAAMPAHAQDNASETAFPDSRIPESAPPVAIWSGPYAGTFVGYNVSRFDNL 73 Query: 73 H------HNAGGSIFAGYNVEDSCIMYGVEGDV---------RYTVPVLADNIHSLHGIG 117 G +AG+N++D ++YGVEGDV R + L ++ + Sbjct: 74 RGASISGDGVAGGAYAGFNLQDGSLVYGVEGDVGGAGFDATRRNALGNL--DLSGESNVF 131 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GSLR R G +V D L+Y T G +A+ + + ++G T G GVE +++S+ Sbjct: 132 GSLRGRVGVDV-DPFLVYGTGGLAIAETELSLGGVSDSEASVGYTIGAGVEA-QVTDSIR 189 Query: 178 ARLEYRASKY 187 RLEYR S + Sbjct: 190 TRLEYRYSDF 199 >gi|222087507|ref|YP_002546044.1| outer membrane protein [Agrobacterium radiobacter K84] gi|221724955|gb|ACM28111.1| outer membrane protein [Agrobacterium radiobacter K84] Length = 204 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 25/174 (14%) Query: 53 FNGPYAGL---SALYNGSF----GEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTV 103 ++GPY G+ A+ G+F G+++ GG + F GYN + ++ GV+G++ Y Sbjct: 35 WSGPYLGVHGGGAITKGNFKFGSGDQSEDFKGGFLGNFFGYNYQFDKVVVGVDGNIDYNW 94 Query: 104 PVLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIA 158 A + + +G G++R R GY D+LL+Y G A+ + + +G+ + Sbjct: 95 NNKA--VANASSVGTDWSGAVRGRVGYAF-DNLLIYGAAGWTAARGFADVSGSGDGKVVF 151 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 G TAG GV+ + ++ AR EYR S + K + +I+LGVG+KF Sbjct: 152 SGWTAGTGVDY-AFTNNIFARAEYRYSDFGSKELQGVKSDLTEQSINLGVGLKF 204 >gi|218461155|ref|ZP_03501246.1| outer membrane protein [Rhizobium etli Kim 5] Length = 168 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGD 98 +A + V ++ G Y G + YN G FG + H + GG +F GYN + I+YGVE D Sbjct: 35 VAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESD 94 Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 + Y+ V + + + +G GS+R R GY++ + LLY T G Sbjct: 95 LGYSGDDVSSGGVENKYGWNGSVRGRVGYDM-NPFLLYGTAG 135 >gi|31322670|gb|AAP22071.1| outer membrane protein [Sinorhizobium fredii] Length = 212 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 43/197 (21%) Query: 38 VPTIATNRYV-PIRHDFNGPYAGLSALYNGSFGEEAHHN----AGGSIFA--------GY 84 VP Y P +++G Y G +A + HH GG+ A GY Sbjct: 30 VPAAPAAEYTDPAVKNWSGAYVGGTANW--------HHGEADATGGNTSAGFGGGLYGGY 81 Query: 85 NVEDSCIMYGVEGDVRYTVPVLADNIHS-----LHGIGGSLRIRGGYEVSDSLLLYATVG 139 NV+D ++YG E DV Y ++ HS G+ GS+R R G ++ + +L+Y T G Sbjct: 82 NVQDGQMVYGGEADVNYA----GNDSHSSGRRVKQGVNGSVRGRVGVDL-NPVLVYGTAG 136 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY---------SKV 190 + + AG +G TAG G E +++++ AR+EYR + Y S V Sbjct: 137 LALGNAKLSTPAGSDDKTLVGWTAGAGAET-FVTDNVTARVEYRYTDYASKDFRTGGSTV 195 Query: 191 EGFYN--TISLGVGMKF 205 Y+ ++ LG+G+KF Sbjct: 196 SSGYDEHSVKLGMGVKF 212 >gi|315498453|ref|YP_004087257.1| porin [Asticcacaulis excentricus CB 48] gi|315416465|gb|ADU13106.1| porin [Asticcacaulis excentricus CB 48] Length = 199 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 27/179 (15%) Query: 52 DFNGPY---------AGLSALYN-GSFGEEAHHNAG---GSIFAGYNVEDSCIMYGVEGD 98 DF+GPY L Y+ G+ E A + G + G+N + + ++GVE D Sbjct: 23 DFSGPYIAGQGGYAKTKLEVTYSAGTTTESASDDTGNGAAGVILGFNAQSNGAVFGVETD 82 Query: 99 VRYT-----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153 + + VL + + + G++R R G+ VS + L Y G + Y + Sbjct: 83 LNWNNAKDRYRVLGEEVETGIDYSGAVRARLGF-VSGNTLFYGAAGVAGTRAYVEYDGEK 141 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-------FYNTISLGVGMKF 205 T G TAG+G + S+ + R+EYR + + VE ++ LG+GMKF Sbjct: 142 ETETVAGWTAGIGADH-AFSDRVFGRIEYRYTDFGDVEDDGVKAELMQQSVWLGLGMKF 199 >gi|146425515|emb|CAM89327.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425525|emb|CAM89318.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425535|emb|CAM89309.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425545|emb|CAM89300.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425565|emb|CAM89282.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425575|emb|CAM89273.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425585|emb|CAM89264.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425595|emb|CAM89255.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425605|emb|CAM89246.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425615|emb|CAM89237.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425625|emb|CAM89228.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425635|emb|CAM89219.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425645|emb|CAM89210.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425655|emb|CAM89201.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425665|emb|CAM89192.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425675|emb|CAM89183.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425685|emb|CAM89174.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425695|emb|CAM89165.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425705|emb|CAM89156.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425715|emb|CAM89147.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425725|emb|CAM89138.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425735|emb|CAM89129.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425745|emb|CAM89120.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425755|emb|CAM89111.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425765|emb|CAM89102.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425775|emb|CAM89093.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425785|emb|CAM89084.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425795|emb|CAM89075.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425805|emb|CAM89066.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425815|emb|CAM89057.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425825|emb|CAM89048.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425835|emb|CAM89039.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425845|emb|CAM89030.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425855|emb|CAM89021.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425865|emb|CAM89012.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425875|emb|CAM89003.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425885|emb|CAM88994.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425895|emb|CAM88985.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425905|emb|CAM88976.2| 25 kDa outer membrane protein [Brucella abortus] gi|146426370|emb|CAM89822.2| 25 kDa outer membrane protein [Brucella suis] gi|146426380|emb|CAM89813.2| 25 kDa outer membrane protein [Brucella suis] gi|146426390|emb|CAM89804.2| 25 kDa outer membrane protein [Brucella suis] gi|146426400|emb|CAM89795.2| 25 kDa outer membrane protein [Brucella suis] gi|146426410|emb|CAM89786.2| 25 kDa outer membrane protein [Brucella suis] gi|146426420|emb|CAM89777.2| 25 kDa outer membrane protein [Brucella suis] gi|146426430|emb|CAM89768.2| 25 kDa outer membrane protein [Brucella suis] gi|146426440|emb|CAM89759.2| 25 kDa outer membrane protein [Brucella suis] gi|146426450|emb|CAM89750.2| 25 kDa outer membrane protein [Brucella suis] gi|146426460|emb|CAM89741.2| 25 kDa outer membrane protein [Brucella suis] gi|146426470|emb|CAM89732.2| 25 kDa outer membrane protein [Brucella suis] gi|146426480|emb|CAM89723.2| 25 kDa outer membrane protein [Brucella suis] gi|146426490|emb|CAM89714.2| 25 kDa outer membrane protein [Brucella suis] gi|146426500|emb|CAM89705.2| 25 kDa outer membrane protein [Brucella suis] gi|146426510|emb|CAM89696.2| 25 kDa outer membrane protein [Brucella suis] gi|146426520|emb|CAM89687.2| 25 kDa outer membrane protein [Brucella suis] gi|146426530|emb|CAM89678.2| 25 kDa outer membrane protein [Brucella suis] gi|146426540|emb|CAM89669.2| 25 kDa outer membrane protein [Brucella suis] gi|146426550|emb|CAM89660.2| 25 kDa outer membrane protein [Brucella suis] gi|146426560|emb|CAM89651.2| 25 kDa outer membrane protein [Brucella suis] gi|146426570|emb|CAM89642.2| 25 kDa outer membrane protein [Brucella suis] gi|146426580|emb|CAM89633.2| 25 kDa outer membrane protein [Brucella suis] gi|146426590|emb|CAM89624.2| 25 kDa outer membrane protein [Brucella suis] gi|146426600|emb|CAM89615.2| 25 kDa outer membrane protein [Brucella suis] gi|146426610|emb|CAM89606.2| 25 kDa outer membrane protein [Brucella suis] gi|146426620|emb|CAM89597.2| 25 kDa outer membrane protein [Brucella suis] gi|146426630|emb|CAM89588.2| 25 kDa outer membrane protein [Brucella suis] gi|146426640|emb|CAM89579.2| 25 kDa outer membrane protein [Brucella suis] gi|146426650|emb|CAM89570.2| 25 kDa outer membrane protein [Brucella suis] gi|146426660|emb|CAM89561.2| 25 kDa outer membrane protein [Brucella suis] gi|146426670|emb|CAM89552.2| 25 kDa outer membrane protein [Brucella suis ATCC 23445] gi|146426680|emb|CAM89543.2| 25 kDa outer membrane protein [Brucella suis] gi|146426690|emb|CAM89534.2| 25 kDa outer membrane protein [Brucella suis] gi|146426700|emb|CAM89525.2| 25 kDa outer membrane protein [Brucella suis] gi|146426710|emb|CAM89516.2| 25 kDa outer membrane protein [Brucella suis] gi|146426720|emb|CAM89507.2| 25 kDa outer membrane protein [Brucella suis] gi|146426730|emb|CAM89498.2| 25 kDa outer membrane protein [Brucella suis] gi|146426740|emb|CAM89489.2| 25 kDa outer membrane protein [Brucella suis] gi|146426750|emb|CAM89480.2| 25 kDa outer membrane protein [Brucella suis] gi|146426760|emb|CAM89471.2| 25 kDa outer membrane protein [Brucella suis] gi|146426770|emb|CAM89462.2| 25 kDa outer membrane protein [Brucella suis] gi|146426780|emb|CAM89453.2| 25 kDa outer membrane protein [Brucella suis 1330] gi|146426900|emb|CAM89345.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146426910|emb|CAM89336.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146427366|emb|CAM90326.2| 25 kDa outer membrane protein [Brucella sp. 5/95] gi|146427376|emb|CAM90317.2| 25 kDa outer membrane protein [Brucella sp. 59/94] gi|146427386|emb|CAM90308.2| 25 kDa outer membrane protein [Brucella sp. UK28/03-13840] gi|146427396|emb|CAM90299.2| 25 kDa outer membrane protein [Brucella sp. F7/99] gi|146427406|emb|CAM90290.2| 25 kDa outer membrane protein [Brucella sp. F10/99] gi|146427416|emb|CAM90281.2| 25 kDa outer membrane protein [Brucella sp. F9/99] gi|146427426|emb|CAM90272.2| 25 kDa outer membrane protein [Brucella sp. F8/99] gi|146427436|emb|CAM90263.2| 25 kDa outer membrane protein [Brucella sp. F6/99] gi|146427446|emb|CAM90254.2| 25 kDa outer membrane protein [Brucella sp. UK5/01] gi|146427456|emb|CAM90245.2| 25 kDa outer membrane protein [Brucella sp. UK40/99] gi|146427466|emb|CAM90236.2| 25 kDa outer membrane protein [Brucella sp. UK13/99] gi|146427476|emb|CAM90227.2| 25 kDa outer membrane protein [Brucella sp. 61/94] gi|146427486|emb|CAM90218.2| 25 kDa outer membrane protein [Brucella sp. 4/96] gi|146427496|emb|CAM90209.2| 25 kDa outer membrane protein [Brucella sp. 55/94] gi|146427506|emb|CAM90200.2| 25 kDa outer membrane protein [Brucella sp. UK24/00 (M192)] gi|146427516|emb|CAM90191.2| 25 kDa outer membrane protein [Brucella sp. 44/94] gi|146427526|emb|CAM90182.2| 25 kDa outer membrane protein [Brucella sp. 39/94] gi|146427536|emb|CAM90173.2| 25 kDa outer membrane protein [Brucella sp. UK31/04] gi|146427546|emb|CAM90164.2| 25 kDa outer membrane protein [Brucella sp. VLA04/06] gi|146427556|emb|CAM90155.2| 25 kDa outer membrane protein [Brucella sp. VLA04/105] gi|146427566|emb|CAM90146.2| 25 kDa outer membrane protein [Brucella sp. VLA04.72] gi|146427576|emb|CAM90137.2| 25 kDa outer membrane protein [Brucella sp. VLA04.67] gi|146427586|emb|CAM90128.2| 25 kDa outer membrane protein [Brucella sp. F96/2] gi|146427596|emb|CAM90119.2| 25 kDa outer membrane protein [Brucella sp. F23/97] gi|146427606|emb|CAM90110.2| 25 kDa outer membrane protein [Brucella sp. UK15/02] gi|146427616|emb|CAM90101.2| 25 kDa outer membrane protein [Brucella sp. UK10/01] gi|146427626|emb|CAM90092.2| 25 kDa outer membrane protein [Brucella sp. UK4/01] gi|146427636|emb|CAM90083.2| 25 kDa outer membrane protein [Brucella sp. UK10/00] gi|146427646|emb|CAM90074.2| 25 kDa outer membrane protein [Brucella sp. UK5/97] gi|146427656|emb|CAM90065.2| 25 kDa outer membrane protein [Brucella sp. UK3/97] gi|146427666|emb|CAM90056.2| 25 kDa outer membrane protein [Brucella sp. UK1/97] gi|146427676|emb|CAM90047.2| 25 kDa outer membrane protein [Brucella sp. 2/96] gi|146427686|emb|CAM90038.2| 25 kDa outer membrane protein [Brucella sp. 14/95] gi|146427696|emb|CAM90029.2| 25 kDa outer membrane protein [Brucella sp. UK35/99] gi|146427706|emb|CAM90020.2| 25 kDa outer membrane protein [Brucella sp. UK15/98] gi|146427716|emb|CAM90011.2| 25 kDa outer membrane protein [Brucella sp. 52/94] gi|146427726|emb|CAM90002.2| 25 kDa outer membrane protein [Brucella sp. 36/94] gi|146427846|emb|CAM89894.2| 25 kDa outer membrane protein [Brucella suis] gi|146427856|emb|CAM89885.2| 25 kDa outer membrane protein [Brucella suis] gi|146427866|emb|CAM89876.2| 25 kDa outer membrane protein [Brucella suis] gi|146427876|emb|CAM89867.2| 25 kDa outer membrane protein [Brucella suis] gi|146427886|emb|CAM89858.2| 25 kDa outer membrane protein [Brucella suis] gi|146427896|emb|CAM89849.2| 25 kDa outer membrane protein [Brucella suis] gi|146427906|emb|CAM89840.2| 25 kDa outer membrane protein [Brucella suis] gi|146427916|emb|CAM89831.2| 25 kDa outer membrane protein [Brucella suis] gi|146427988|emb|CAM90407.2| 25 kDa outer membrane protein [Brucella sp. F5/02] gi|146428001|emb|CAM90398.2| 25 kDa outer membrane protein [Brucella sp. F5/99] gi|146428011|emb|CAM90389.2| 25 kDa outer membrane protein [Brucella sp. VLA05/8] gi|146428021|emb|CAM90380.2| 25 kDa outer membrane protein [Brucella sp. VLA05/4] gi|146428031|emb|CAM90371.2| 25 kDa outer membrane protein [Brucella sp. UK3/05] gi|146428041|emb|CAM90362.2| 25 kDa outer membrane protein [Brucella sp. 14/94] gi|146428051|emb|CAM90353.2| 25 kDa outer membrane protein [Brucella sp. UK2/2000] gi|146428061|emb|CAM90344.2| 25 kDa outer membrane protein [Brucella sp. UK1/2000] gi|146428071|emb|CAM90335.2| 25 kDa outer membrane protein [Brucella sp. UK43/99] gi|170015689|emb|CAP05282.1| 25 kDa outer membrane protein [Brucella sp. BO1] Length = 163 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52 Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119 +A + GSI FAG+N + I+YGVEGD Y+ + D + G GS Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 LR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160 >gi|307944219|ref|ZP_07659560.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4] gi|307772565|gb|EFO31785.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4] Length = 242 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 32/202 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPI---RHDFNGPY 57 M++L A +++++A + AAD + A PT T Y P R D++G Y Sbjct: 19 MKRLACAAIAATVSVAGLAPSYAADLPQAA--------PTYDTT-YEPAPSGRFDWSGAY 69 Query: 58 AGLSALY-----------NGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPV 105 AG S + GSF + + +GG + GYN I+ GVE D + T Sbjct: 70 AGGSLGWVWSGFDTTSSPTGSFDHDTNGFSGG-VHGGYNFAITPNIVAGVELDFQMTDLY 128 Query: 106 LAD-----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 N+ + S R R GY + D L+Y T G +A A+G Sbjct: 129 ENTVRNGVNVKTSSAWNSSARARLGYAM-DRFLVYGTAGLAIADLSINANGASEDTTALG 187 Query: 161 GTAGVGVEVGGLSESLVARLEY 182 TAG GVE G +S +L AR+EY Sbjct: 188 WTAGAGVE-GAISNNLTARVEY 208 >gi|146427796|emb|CAM89939.2| 25 kDa outer membrane protein [Brucella canis] gi|146427806|emb|CAM89930.2| 25 kDa outer membrane protein [Brucella canis] gi|146427816|emb|CAM89921.2| 25 kDa outer membrane protein [Brucella canis] gi|146427826|emb|CAM89912.2| 25 kDa outer membrane protein [Brucella canis] gi|146427836|emb|CAM89903.2| 25 kDa outer membrane protein [Brucella canis] Length = 163 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52 Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119 +A + GSI FAG+N + I+YGVEGD Y+ + D + G GS Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 LR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160 >gi|116251075|ref|YP_766913.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255723|emb|CAK06804.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|220979415|gb|ACL97989.1| outer membrane protein B2 [Rhizobium leguminosarum bv. viciae] Length = 205 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 17/185 (9%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V ++L L+ A AAD P + V +D++G Y G Y+ S Sbjct: 6 VACAALTLSVAVPAVAADLTYE--------TPPAPSAGQVSSAYDWSGFYLGAQGGYSWS 57 Query: 68 ----FGEEAHHNAGGS-IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 G + ++G S + AGYN + I+YG+E D Y N ++ S R Sbjct: 58 QATILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGRA 114 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 R GY +L K + AG+ I IG TAG G+E ++++++ R EY Sbjct: 115 RVGYAWDRTLFFATAGVAAGGGKVDIPAAGKKDGILIGWTAGGGIE-HAVTDNILVRAEY 173 Query: 183 RASKY 187 R S + Sbjct: 174 RHSDF 178 >gi|241203671|ref|YP_002974767.1| hypothetical protein Rleg_0932 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857561|gb|ACS55228.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 205 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 17/185 (9%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V + LAL+ A AAD P + V +D++G Y G Y+ S Sbjct: 6 VACAVLALSVAVPAVAADLTYE--------TPPAPSAGEVSSAYDWSGFYLGAQGGYSWS 57 Query: 68 ----FGEEAHHNAGGS-IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 G + ++G S + AGYN + I+YG+E D Y N ++ S R Sbjct: 58 QAKILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGRA 114 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 R GY +L K + AG+ I IG TAG G+E ++++++ R EY Sbjct: 115 RVGYAWDRTLFFATAGVAAGGGKVDISAAGKKDGILIGWTAGGGIE-HAVTDNILVRGEY 173 Query: 183 RASKY 187 R S + Sbjct: 174 RHSDF 178 >gi|15888468|ref|NP_354149.1| outer membrane protein [Agrobacterium tumefaciens str. C58] gi|18139945|gb|AAL60203.1|AF445083_1 outer membrane protein [Agrobacterium tumefaciens str. C58] gi|15156164|gb|AAK86934.1| outer membrane protein [Agrobacterium tumefaciens str. C58] Length = 218 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 40/230 (17%) Query: 3 KLFLAVGV-SSLALASFCSAQAADPVRRAHHGGRGVVPT--IATNRYVPIRHDFNGPYAG 59 ++F+A + S++A A F +A AAD V VP +A ++ ++ D++G Y G Sbjct: 2 RIFVATLMASTMAAAGFSAAYAADAVNE--------VPQAPVAYDQPAAVK-DWSGAYLG 52 Query: 60 LSALYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGVEGDVRY------TVPVL 106 + Y+ +G + N G G ++ GYN++ I+YG E DV V Sbjct: 53 GTVNYD--WGRFSSSNDGRDAKGFGGGVYGGYNMQSGQIVYGAEADVNMGDEKGSAGTVA 110 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 + G+ GSLR R GY+++ LLY T G V+ + + A+G T G G Sbjct: 111 GRAVEGKQGVNGSLRGRVGYDMN-PFLLYGTAGLAVSDNKVRDGVNKDSATALGYTVGAG 169 Query: 167 VEVGGLSESLVARLEYRASKYSKVE----------GFYN-TISLGVGMKF 205 VE +++++ ARLEYR S Y K + GF + ++ G+G+KF Sbjct: 170 VEA-MVTDNITARLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF 218 >gi|146425555|emb|CAM89291.2| 25 kDa outer membrane protein [Brucella melitensis] Length = 163 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52 Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119 +A + GSI FAG+N + I+YGVEGD Y+ + D + G GS Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 LR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 113 LRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLE 160 >gi|146427736|emb|CAM89993.2| 25 kDa outer membrane protein [Brucella neotomae] gi|146427746|emb|CAM89984.2| 25 kDa outer membrane protein [Brucella neotomae] gi|146427756|emb|CAM89975.2| 25 kDa outer membrane protein [Brucella neotomae] Length = 163 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 22/169 (13%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52 Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119 +A + GSI FAG+N + I+YGVEGD Y+ + D + G GS Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGS 112 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 LR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 113 LRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160 >gi|146427766|emb|CAM89966.2| 25 kDa outer membrane protein [Brucella canis] gi|146427776|emb|CAM89957.2| 25 kDa outer membrane protein [Brucella canis] gi|146427786|emb|CAM89948.2| 25 kDa outer membrane protein [Brucella canis] Length = 163 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 22/169 (13%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52 Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119 +A + GSI FAG+N + I+YGVEGD Y+ + D G GS Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGPEVKQGFEGS 112 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 LR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160 >gi|146426790|emb|CAM89444.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426800|emb|CAM89435.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426810|emb|CAM89426.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426820|emb|CAM89417.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426830|emb|CAM89408.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426840|emb|CAM89399.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426850|emb|CAM89390.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426860|emb|CAM89381.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426870|emb|CAM89372.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426880|emb|CAM89363.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426890|emb|CAM89354.2| 25 kDa outer membrane protein [Brucella ovis] Length = 163 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 4 VSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLGYGW 52 Query: 70 EEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGS 119 +A + GSI FAG+N + I+YGVEG+ Y+ + D + G GS Sbjct: 53 NKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQGFEGS 112 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 LR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 113 LRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 160 >gi|209548422|ref|YP_002280339.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534178|gb|ACI54113.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 204 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 80 IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 + AGYN + I+YG+E D Y D G R R GY ++ +L Sbjct: 74 LHAGYNFQSGNIVYGIENDFNYNFKKNDDANLEWDASG---RARVGYALNRTLFFATAGV 130 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 K + AG+ I IG TAG G+E +++ ++ R EYR S +S + Sbjct: 131 AAGGGKVDIPTAGKKDGILIGWTAGGGIE-HAVTDHILVRGEYRHSDFSNKD 181 >gi|156739552|gb|ABU93436.1| Omp25 [Brucella abortus] Length = 123 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T G Sbjct: 28 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAG 86 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 87 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 115 >gi|156739530|gb|ABU93425.1| Omp25 [Brucella suis] gi|156739540|gb|ABU93430.1| Omp25 [Brucella abortus] gi|156739558|gb|ABU93439.1| Omp25 [Brucella melitensis] gi|156739590|gb|ABU93455.1| Omp25 [Brucella suis] gi|156739594|gb|ABU93457.1| Omp25 [Brucella suis] gi|156739614|gb|ABU93467.1| Omp25 [Brucella melitensis] gi|156739630|gb|ABU93475.1| Omp25 [Brucella suis] Length = 128 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 11/120 (9%) Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-D 108 G + LY G +A + GSI FAG+N + I+YGVEGD Y+ + D Sbjct: 2 GYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKD 61 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 + G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 62 GLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 120 >gi|156739536|gb|ABU93428.1| Omp25 [Brucella abortus] Length = 105 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G Sbjct: 11 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 69 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 70 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 98 >gi|156739528|gb|ABU93424.1| Omp25 [Brucella melitensis] Length = 124 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T G Sbjct: 29 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAG 87 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 88 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 116 >gi|156739534|gb|ABU93427.1| Omp25 [Brucella suis] gi|156739618|gb|ABU93469.1| Omp25 [Brucella melitensis] Length = 98 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T G Sbjct: 3 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAG 61 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 62 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 90 >gi|156739532|gb|ABU93426.1| Omp25 [Brucella suis] gi|156739566|gb|ABU93443.1| Omp25 [Brucella melitensis] gi|156739572|gb|ABU93446.1| Omp25 [Brucella melitensis] gi|156739576|gb|ABU93448.1| Omp25 [Brucella melitensis] Length = 106 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G Sbjct: 11 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 69 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 70 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 98 >gi|156739580|gb|ABU93450.1| Omp25 [Brucella canis] Length = 105 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G Sbjct: 10 FAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 68 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 69 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 97 >gi|156739520|gb|ABU93420.1| Omp25 [Brucella canis] gi|156739522|gb|ABU93421.1| Omp25 [Brucella canis] Length = 128 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 11/120 (9%) Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-D 108 G + LY G +A + GSI FAG+N + I+YGVEGD Y+ + D Sbjct: 2 GYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKD 61 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 + G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 62 GLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 120 >gi|156739538|gb|ABU93429.1| Omp25 [Brucella abortus] gi|156739542|gb|ABU93431.1| Omp25 [Brucella abortus] gi|156739562|gb|ABU93441.1| Omp25 [Brucella melitensis] gi|156739574|gb|ABU93447.1| Omp25 [Brucella melitensis] gi|156739596|gb|ABU93458.1| Omp25 [Brucella suis] gi|156739600|gb|ABU93460.1| Omp25 [Brucella suis] gi|156739604|gb|ABU93462.1| Omp25 [Brucella suis] gi|156739616|gb|ABU93468.1| Omp25 [Brucella melitensis] gi|156739628|gb|ABU93474.1| Omp25 [Brucella abortus] Length = 108 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G Sbjct: 13 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 71 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 72 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 100 >gi|156739546|gb|ABU93433.1| Omp25 [Brucella abortus] Length = 109 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G Sbjct: 14 FAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 72 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 73 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 101 >gi|222149200|ref|YP_002550157.1| outer membrane protein [Agrobacterium vitis S4] gi|221736185|gb|ACM37148.1| outer membrane protein [Agrobacterium vitis S4] Length = 212 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%) Query: 91 IMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 ++ GVE DV Y +N +S +G GS R R GY + D L++ G + Y Sbjct: 92 VILGVEADVNYD---WNENNYSGVKVGMDVSGSARARAGYAI-DRALIFVAGGWTADRTY 147 Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY--SKVEGF-----YNTISL 199 +G+ G T G GV+ ++ + RLEYR + Y + G N ++L Sbjct: 148 IKSSSGDFNKTLNGWTIGAGVDYA-ITNRIFTRLEYRYNDYGTKNISGIDFDSKQNVVNL 206 Query: 200 GVGMKF 205 G+G+KF Sbjct: 207 GIGIKF 212 >gi|156739612|gb|ABU93466.1| Omp25 [Brucella canis] Length = 104 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+++ ++ Y T G Sbjct: 9 FAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLN-PVMPYLTAG 67 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVE 168 +Q + + +G TAG G+E Sbjct: 68 IAGSQIKLNNGLDDESKFRVGWTAGAGLE 96 >gi|156739524|gb|ABU93422.1| Omp25 [Brucella neotomae] Length = 128 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 11/120 (9%) Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-D 108 G + LY G +A + GSI FAG+N + I+YGVEGD Y+ + D Sbjct: 2 GYTGLYLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKD 61 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 + G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 62 GLEVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLE 120 >gi|90422419|ref|YP_530789.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisB18] gi|90104433|gb|ABD86470.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisB18] Length = 207 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 27/175 (15%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYNGSFGEEAHHNA- 76 SAQAAD +GG T+ Y P+ H + GPY G + Y ++G+ H++A Sbjct: 17 SSAQAAD----LPYGGSRAPYTV----YQPLNAHSWAGPYLGGNLGY--AWGD-VHNSAT 65 Query: 77 -----GGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYE 127 G + AGYN + +YG+EGD+ T AD+ + G++R R GY Sbjct: 66 EPSGVAGGVQAGYNWQSGQFVYGLEGDIAITG---ADDTFASWKFSNPWFGTVRGRAGYS 122 Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 D+LL+YAT G + + G T G G E GL+++ A++EY Sbjct: 123 F-DNLLVYATGGLAFGELKGERFGQSNSSTNAGWTIGAGAEF-GLNQNWSAKVEY 175 >gi|227821981|ref|YP_002825952.1| outer membrane protein [Sinorhizobium fredii NGR234] gi|227340981|gb|ACP25199.1| outer membrane protein [Sinorhizobium fredii NGR234] Length = 216 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 14/138 (10%) Query: 81 FAGYNVEDSCIMYGVEGDVRY-----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 FAGYN + + GVEGDV Y + V + + GS+R R GY +++ LLY Sbjct: 80 FAGYNYQMGDWVVGVEGDVSYNWNDKSFTVFGASTEVGTDVSGSVRGRVGYTLNEKALLY 139 Query: 136 ATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------ 188 T G V + + + A + G T G G++ + S+ R EYR + + Sbjct: 140 GTGGWAVTRGFVDVAGAPKEKETFNGWTIGGGIDY-AFTNSMFGRAEYRYNDFGDKDVGG 198 Query: 189 -KVEGFYNTISLGVGMKF 205 V+ + ++GVG+KF Sbjct: 199 VDVDLDQHQFTVGVGVKF 216 >gi|87199324|ref|YP_496581.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM 12444] gi|87135005|gb|ABD25747.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM 12444] Length = 185 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 7/115 (6%) Query: 77 GGSIFAGYNVEDSCIMY-GVEGDVRYTVPVLADNIHSL---HGIGGSLRIRGGYEVSDSL 132 GG++FAGYN + + +Y GVE + + D+ SL + GGS + G+ SDS Sbjct: 52 GGTVFAGYNFDLTSSVYAGVEANFDLATAKIGDDTDSLEADYAFGGSALL--GFRPSDST 109 Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 LY VG + T E + A G G+G++ L+E L R+EY + Y Sbjct: 110 ALYGRVGYQRGRGTLTVDGTEYSDSADGLRLGLGLQA-DLTEKLGVRVEYNHTHY 163 >gi|146342874|ref|YP_001207922.1| putative outer membrane protein [Bradyrhizobium sp. ORS278] gi|146195680|emb|CAL79707.1| putative outer membrane protein precursor [Bradyrhizobium sp. ORS278] Length = 214 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 25/174 (14%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYN-GSFGEEAHHNAG 77 SAQAAD + GRG T+ P+ + + GPY G + Y G+ G A +G Sbjct: 23 SAQAAD---LGYGYGRGAPYTVNQ----PLNAYSWAGPYLGGTLGYQWGTVGNSATKPSG 75 Query: 78 --GSIFAGYNVED-SCIMYGVEGDVRYT------VPVLADNIHSLHGIGGSLRIRGGYEV 128 G + AGYN ++ S + G+EGD+ + P N G+LR R GY Sbjct: 76 LVGGVTAGYNWQNGSPWVLGIEGDINLSGANDTFAPWKFSNPWF-----GTLRGRVGYAF 130 Query: 129 SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 ++ L + ET E + A+G T GVG E GL+++ A++EY Sbjct: 131 NNILFYGTGGLALGGLRAETFGLSE-SHTAVGWTLGVGTEF-GLAQNWTAKIEY 182 >gi|256809513|gb|ACV30857.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 23/141 (16%) Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 ++S AL F +A AAD ++ P A P ++ + G Y GL Y G Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50 Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGG 118 +A +A G+I +AG+N + +YGVEGD Y+ + D + G G Sbjct: 51 WNKAKTDAVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKDGLEVKQGFEG 110 Query: 119 SLRIRGGYEVSDSLLLYATVG 139 SLR R GY++ + ++ Y T G Sbjct: 111 SLRARLGYDL-NPVMPYITAG 130 >gi|190891678|ref|YP_001978220.1| outer membrane protein [Rhizobium etli CIAT 652] gi|218510868|ref|ZP_03508746.1| outer membrane protein [Rhizobium etli Brasil 5] gi|190696957|gb|ACE91042.1| outer membrane protein [Rhizobium etli CIAT 652] Length = 207 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 45/225 (20%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL---SA 62 L + + LAL + +A AAD V+ VPT A P+ ++GPY G+ + Sbjct: 3 LTIATAFLALVA-TTAFAADVVQD--------VPT-APVAAAPV-FTWSGPYFGIDGGAG 51 Query: 63 LYNGSF---GEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI 116 NG F G A + G +F AGYN + I+ G+EG++ + N + + Sbjct: 52 WLNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEH-------NWNEEDAL 104 Query: 117 G--------GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGV 167 G G++R R GY D L+Y G + Y + + T G T G GV Sbjct: 105 GADVGTDWAGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGV 163 Query: 168 EVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205 + ++ ++ AR EYR + Y + V+ + + G+G+KF Sbjct: 164 DF-AITNNIFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207 >gi|222102056|ref|YP_002546646.1| hypothetical protein Arad_12130 [Agrobacterium radiobacter K84] gi|221728173|gb|ACM31182.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 205 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%) Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 GYN + I+YG+E D Y N L S R R GY + +LL Sbjct: 78 GYNFQTGNIIYGIENDFNYNFD--KGNKADLQ-WDASGRARVGYALDRTLLFATAGLAAA 134 Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 K + G+ I IG TAG GVE L+++++ R EYR S + K + Sbjct: 135 GGKVDAPAIGKKDDILIGWTAGAGVER-ALTDNILIRGEYRYSDFGKKD 182 >gi|27382580|ref|NP_774109.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27355752|dbj|BAC52734.1| bll7469 [Bradyrhizobium japonicum USDA 110] Length = 208 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 12/139 (8%) Query: 51 HDFNGPYAGLSALYN-GSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 + + GPY G + Y GS +G G I AGYN ++ ++GVEGD++ A Sbjct: 43 YSWAGPYLGGNIGYEWGSVDNNPSKPSGFVGGIQAGYNFQNGPWVFGVEGDIQ---AAGA 99 Query: 108 DNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163 D+ + G+LR R GY S+ +L Y T G + + + G T Sbjct: 100 DDTFAPWKFSNPWFGTLRGRVGYAFSN-VLFYGTAGLAFGELRAQTFGWTESHTSAGWTI 158 Query: 164 GVGVEVGGLSESLVARLEY 182 G G EV GL+ + A+LEY Sbjct: 159 GAGAEV-GLAPNWSAKLEY 176 >gi|256809485|gb|ACV30843.1| 25 kDa outer membrane protein [Ochrobactrum cytisi] Length = 130 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%) Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 ++S AL F +A AAD ++ P A P ++ + G Y GL Y G Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50 Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118 +A + G+I +AG+N + +YGVEGD Y+ D + G G Sbjct: 51 WNKAKTDTVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 110 Query: 119 SLRIRGGYEVSDSLLLYATVG 139 SLR R GY++ + ++ Y T G Sbjct: 111 SLRARLGYDL-NPVMPYITAG 130 >gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062] gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062] Length = 221 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 27/179 (15%) Query: 51 HDFNGPYAGLSALY-----NGSFG-----EEAHHNAGGSIFAGYN--VEDSCIMYGVEGD 98 +D++G Y G +A + +G G ++ + + AGYN V S ++ G E D Sbjct: 46 YDWSGAYIGANAGWGFLSADGKSGASGALDDDQNGVTAGVHAGYNFMVAPSVVL-GAEAD 104 Query: 99 VRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 ++Y + + + ++R R GY + D L+Y T G AG+ Sbjct: 105 IQYNDLEEKSAGVELQSDWNATVRARAGYAL-DRTLVYGTGGAAFKDLTAKSSAGKDEKT 163 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKY-----------SKVEGFYNTISLGVGMKF 205 AIG G GVE ++++L ARLEY + K + N + GV MKF Sbjct: 164 AIGYVVGAGVE-HAVTDTLTARLEYLYQDFGDQKFDFGGTTEKTKIDENLVRAGVSMKF 221 >gi|319783284|ref|YP_004142760.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169172|gb|ADV12710.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 217 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 22/157 (14%) Query: 53 FNGPYAGLSA--------LYNGSFGEEAHHNAGGSI---FAGYNVEDSCIMYGVEGDV-- 99 + GPYAG+ +Y A HN G + FAGYN++ I+YGVEG++ Sbjct: 34 WQGPYAGVFGAGTLEHYKIYGPGAQAGATHNVGSATVGGFAGYNLQSGKIVYGVEGELGY 93 Query: 100 RYTVPVLAD-----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA--QKYETGKAG 152 R+ D + + G+ GS++ R G ++ + + + T G A + + G Sbjct: 94 RFKKNTFDDIPGPGVLDASTGLFGSVKGRVGMDMG-AYMPFVTAGVTAAKLKTFYPGGNA 152 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 E +GG G G++V L+ ++ R EY S + K Sbjct: 153 ERDATLVGGVVGAGIDV-ALTHNVFLRGEYDFSFFGK 188 >gi|256809411|gb|ACV30806.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%) Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 ++S AL F +A AAD ++ P A P ++ + G Y GL Y G Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50 Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118 +A + G++ +AG+N + +YGVEGD Y+ D + G G Sbjct: 51 WNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 110 Query: 119 SLRIRGGYEVSDSLLLYATVG 139 SLR R GY++ + ++ Y T G Sbjct: 111 SLRARLGYDL-NPIMPYITAG 130 >gi|256809401|gb|ACV30801.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809403|gb|ACV30802.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809405|gb|ACV30803.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809407|gb|ACV30804.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809409|gb|ACV30805.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809413|gb|ACV30807.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809415|gb|ACV30808.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809417|gb|ACV30809.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809419|gb|ACV30810.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809421|gb|ACV30811.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809423|gb|ACV30812.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809425|gb|ACV30813.1| 25 kDa outer membrane protein [Ochrobactrum lupini] gi|256809427|gb|ACV30814.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809447|gb|ACV30824.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809449|gb|ACV30825.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809451|gb|ACV30826.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809453|gb|ACV30827.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809455|gb|ACV30828.1| 25 kDa outer membrane protein [Ochrobactrum anthropi ATCC 49188] gi|256809457|gb|ACV30829.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809459|gb|ACV30830.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809461|gb|ACV30831.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809463|gb|ACV30832.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809465|gb|ACV30833.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809467|gb|ACV30834.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809469|gb|ACV30835.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809471|gb|ACV30836.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809473|gb|ACV30837.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809475|gb|ACV30838.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809477|gb|ACV30839.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809479|gb|ACV30840.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809481|gb|ACV30841.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809483|gb|ACV30842.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809487|gb|ACV30844.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809489|gb|ACV30845.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809491|gb|ACV30846.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809493|gb|ACV30847.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809495|gb|ACV30848.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809497|gb|ACV30849.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809499|gb|ACV30850.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809501|gb|ACV30851.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809503|gb|ACV30852.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809505|gb|ACV30853.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809507|gb|ACV30854.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809509|gb|ACV30855.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809511|gb|ACV30856.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809515|gb|ACV30858.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809517|gb|ACV30859.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809523|gb|ACV30862.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809527|gb|ACV30864.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809529|gb|ACV30865.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809531|gb|ACV30866.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809533|gb|ACV30867.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809535|gb|ACV30868.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%) Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 ++S AL F +A AAD ++ P A P ++ + G Y GL Y G Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGL---YLGYG 50 Query: 69 GEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGG 118 +A + G++ +AG+N + +YGVEGD Y+ D + G G Sbjct: 51 WNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEG 110 Query: 119 SLRIRGGYEVSDSLLLYATVG 139 SLR R GY++ + ++ Y T G Sbjct: 111 SLRARLGYDL-NPVMPYITAG 130 >gi|90419513|ref|ZP_01227423.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans SI85-9A1] gi|90336450|gb|EAS50191.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans SI85-9A1] Length = 223 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 26/177 (14%) Query: 53 FNGPYAGLSALYNGS-FGEEAHHNAGGS-----IFAGYNVEDSCIMYGVEGDV------- 99 ++G YAG YN S F + + G ++ GYN + ++G+E D+ Sbjct: 49 WSGAYAGAFVGYNTSNFDQSTGASFDGDGFVGGVYTGYNWQADQFVFGLEADLGGSDVDA 108 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 T + + I GS R R G V D L++AT G A+ + + +I Sbjct: 109 SGTNAATGAQLDADSNIFGSFRARVGVAV-DPFLVFATGGLAAARNELSLNGFSDSQTSI 167 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKY----------SKVEGF-YNTISLGVGMKF 205 G T G GVE +S+ + RLEYR S + S GF ++I G+ +KF Sbjct: 168 GYTLGAGVEA-RVSDDVTTRLEYRYSDFGSETYDLGNTSVSSGFDEHSIRAGIALKF 223 >gi|256809429|gb|ACV30815.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809431|gb|ACV30816.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809433|gb|ACV30817.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809435|gb|ACV30818.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809437|gb|ACV30819.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809439|gb|ACV30820.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809441|gb|ACV30821.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809443|gb|ACV30822.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809445|gb|ACV30823.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809519|gb|ACV30860.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809521|gb|ACV30861.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809525|gb|ACV30863.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809539|gb|ACV30870.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 17/138 (12%) Query: 10 VSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL------SA 62 ++S AL F +A AAD ++ P A P ++ + G Y GL + Sbjct: 2 IASAALLPFSATAFAADAIQEQP-------PVPAPVEMAP-QYSWAGGYTGLYLGYGWNK 53 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLR 121 + + G + +AG+N + +YGVEGD Y+ D + G GSLR Sbjct: 54 VKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSLR 113 Query: 122 IRGGYEVSDSLLLYATVG 139 R GY++ + ++ Y T G Sbjct: 114 ARLGYDL-NPVMPYITAG 130 >gi|218678361|ref|ZP_03526258.1| outer membrane protein [Rhizobium etli CIAT 894] Length = 96 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%) Query: 38 VPTIATNRYVPIRH--DFNGPYAGLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMY 93 +P + P++ ++ G Y G + YN GSFG + H + GG +F GYN + I+Y Sbjct: 30 IPEAPVAQDAPVKPAGNWEGFYLGGAGTYNMGSFGSDRHTYGFGGQVFTGYNWQQGQIVY 89 Query: 94 GVEGDV 99 GVE D+ Sbjct: 90 GVESDL 95 >gi|150395644|ref|YP_001326111.1| porin [Sinorhizobium medicae WSM419] gi|150027159|gb|ABR59276.1| porin [Sinorhizobium medicae WSM419] Length = 225 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 83/207 (40%), Gaps = 42/207 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG- 59 M++ FL+ + AL+ +A A PV P I+ P D+NG Y G Sbjct: 1 MKRYFLSAAFLAGALSPVVAADLA-PVESP--------PAIS----APAAFDWNGFYLGG 47 Query: 60 --------LSALYNGSFGEEAHHNAG---GSIFAGYNVEDSCIMYGVEGDV-------RY 101 + Y FGE AHH+ G + AGYN + + G E D Sbjct: 48 NVGGGRADVDWTYQ-PFGETAHHDGKGFLGGVQAGYNWQIDGFVIGAEADFLGSSIDGDT 106 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE------TGKAGEIT 155 P A + S ++R R GY D+LL+YAT G + ++E G +G Sbjct: 107 PCPNPAYSCTSDTKWLSTVRARAGYSF-DNLLVYATGGLGIG-RFEIKTDDGAGTSGSTI 164 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY 182 G AG GVE G S + + EY Sbjct: 165 RNDTGWVAGAGVEY-GFSPNWSIKAEY 190 >gi|327189607|gb|EGE56759.1| outer membrane protein [Rhizobium etli CNPAF512] Length = 207 Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 24/173 (13%) Query: 53 FNGPYAGL---SALYNGSF---GEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTV 103 ++GPY G+ + NG F G A + G +F AGYN + I+ G+EG++ + Sbjct: 39 WSGPYFGIDGGAGWLNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNW 98 Query: 104 ---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAI 159 L ++ + G++R R GY D L+Y G + Y + + T Sbjct: 99 NEEDALGADVGT--DWAGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFN 155 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205 G T G GV+ ++ ++ AR EYR + Y + V+ + + G+G+KF Sbjct: 156 GYTVGAGVDF-AITNNIFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207 >gi|328542837|ref|YP_004302946.1| OmpA-like transmembrane domain [polymorphum gilvum SL003B-26A1] gi|326412583|gb|ADZ69646.1| OmpA-like transmembrane domain, putative [Polymorphum gilvum SL003B-26A1] Length = 223 Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 86/201 (42%), Gaps = 34/201 (16%) Query: 3 KLFLAVGVSSLALA-SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG-- 59 K A GVS LA + A AAD + A P I N+ R D++G Y G Sbjct: 2 KSLAAAGVSIAVLAGASLPAFAADLPQPAQ-------PVIYDNQVSSARFDWSGFYFGGN 54 Query: 60 ---------LSALYNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYGVEGDVRYTVPVLADN 109 ++ G F +A GG + AGYN I+ G+E D + + + Sbjct: 55 LGWGWGQFTTNSALTGRFNSDASGVNGG-VHAGYNHAITPNIIAGLEADFQLSD---LEK 110 Query: 110 IHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161 S+ G+G ++R R GY D ++Y T G +A + AIG Sbjct: 111 RRSVAGVGVKTSSDWNSTIRGRLGYAF-DRFMIYGTGGLAIADLEVAAAGSKGNETAIGW 169 Query: 162 TAGVGVEVGGLSESLVARLEY 182 T G G+E G +++++ ARLEY Sbjct: 170 TLGAGIE-GAVTDNVTARLEY 189 >gi|148253259|ref|YP_001237844.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1] gi|146405432|gb|ABQ33938.1| putative outer membrane protein precursor [Bradyrhizobium sp. BTAi1] Length = 206 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 28/175 (16%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYN-GSFGEEAHHNA 76 SAQAAD + GR T+ P+ + + GPY G + Y GS G + Sbjct: 17 VSAQAAD-----FNYGRQAPYTVNQ----PLNAYSWAGPYLGGTLGYEWGSVGNNPTKPS 67 Query: 77 G--GSIFAGYNVEDSCIMYGVEGDVRYT------VPVLADNIHSLHGIGGSLRIRGGYEV 128 G G + AGYN ++ ++G EGD+ T P N G++R R GY Sbjct: 68 GLVGGLTAGYNWQNGPWVFGAEGDINLTGANDTFAPWKFSNPWF-----GTVRGRAGYAF 122 Query: 129 SDSLLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +++L Y T G + ET E + ++G T G G E GL+++ A++EY Sbjct: 123 -NNILFYGTGGLAFGGLRGETFGLSE-SHTSLGWTLGAGAEF-GLAQNWTAKIEY 174 >gi|256809537|gb|ACV30869.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%) Query: 59 GLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYT-VPVLAD 108 G + LY G +A + G++ +AG+N + +YGVEGD Y+ D Sbjct: 41 GYTGLYLGYGWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKD 100 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 + G GSLR R GY++ + ++ Y T G Sbjct: 101 GLEVKQGFEGSLRARLGYDL-NPVMPYITAG 130 >gi|91975762|ref|YP_568421.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] gi|91682218|gb|ABE38520.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] Length = 207 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%) Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133 G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D LL Sbjct: 72 GGVQGGYNWQSGNIVFGLEGDIQFST---ADDTFAPYKFSNPWFGTARGRVGYAMND-LL 127 Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +YAT G Q + + G T G G E + L A++EY Sbjct: 128 IYATGGFAFGQLKGERLLSTESHSSAGWTVGAGAEF-AFAPKLSAKVEY 175 >gi|182677110|ref|YP_001831256.1| porin [Beijerinckia indica subsp. indica ATCC 9039] gi|182632993|gb|ACB93767.1| porin [Beijerinckia indica subsp. indica ATCC 9039] Length = 244 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 83 GYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 G+N + S + G EGDV + PV + S + GSLR R G D +L+Y Sbjct: 84 GFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTSRIPVDGSLRGRIG-AAWDRVLVY 142 Query: 136 ATVGPDVAQKYE-------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 AT G A + +T +G T G GVE ++++ R++YR + Y Sbjct: 143 ATGGAAFASIKHGYIGSSLVPGSATLTNDRVGWTVGGGVEY-AMTDNWSVRVDYRYTDYG 201 Query: 189 KVEGFYNTISL 199 + F TI++ Sbjct: 202 NISDFPGTITV 212 >gi|218461202|ref|ZP_03501293.1| outer membrane protein [Rhizobium etli Kim 5] gi|218658675|ref|ZP_03514605.1| outer membrane protein [Rhizobium etli IE4771] Length = 207 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 34/178 (19%) Query: 53 FNGPYAGL---SALYNGSF---GEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTV 103 ++GPY G+ +A NG F G A + G +F AGYN + + G+EG++ + Sbjct: 39 WSGPYFGIDGGAAWLNGDFSAGGASASEDFNGGVFGGFAGYNFQFDNFVVGIEGNLEH-- 96 Query: 104 PVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEI 154 N + +G G++R R GY D L+Y G + Y + + Sbjct: 97 -----NWNEEDALGAEVGTDWAGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKE 150 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205 T G T G GV+ ++ ++ AR EYR + Y + V+ + + G+G+KF Sbjct: 151 TETFNGYTVGAGVDF-AITNNIFARGEYRYNDYGEQDILGVDVDLDQHELKFGIGVKF 207 >gi|316932716|ref|YP_004107698.1| putative outer-membrane immunogenic protein [Rhodopseudomonas palustris DX-1] gi|315600430|gb|ADU42965.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris DX-1] Length = 207 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 9/109 (8%) Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133 G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D +L Sbjct: 72 GGLQGGYNWQSGNIVFGLEGDIQFST---ADDTFAPYKFSNPWFGTGRGRIGYAMND-VL 127 Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +YAT G Q A + + G T G G E + L A++EY Sbjct: 128 IYATGGLAFGQLKGQNLAVSESHSSAGWTVGAGAEF-AFAPKLSAKVEY 175 >gi|192289773|ref|YP_001990378.1| outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris TIE-1] gi|192283522|gb|ACE99902.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris TIE-1] Length = 207 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%) Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133 G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D +L Sbjct: 72 GGVQGGYNWQSGNIVFGLEGDIQFST---ADDTFAQYKFSNPWFGTGRGRIGYAMND-VL 127 Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +YAT G Q + + G T G G E + L A++EY Sbjct: 128 IYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAPKLSAKVEY 175 >gi|86748303|ref|YP_484799.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86571331|gb|ABD05888.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 207 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%) Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133 G + GYN + I++G+EGD++++ A++ + + G+ R R GY ++D +L Sbjct: 72 GGVQGGYNWQSGNIVFGLEGDIQFST---ANDTFASYKFSNPWFGTARGRVGYAMND-IL 127 Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 LYAT G Q + + G T G G E + L A++EY Sbjct: 128 LYATGGLAFGQLKGEYLLSSESHTSAGWTVGAGAEF-AFAPKLSAKVEY 175 >gi|153007478|ref|YP_001368693.1| porin [Ochrobactrum anthropi ATCC 49188] gi|151559366|gb|ABS12864.1| porin [Ochrobactrum anthropi ATCC 49188] Length = 229 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 29/166 (17%) Query: 67 SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT-----VPVLADNI-----HSLHG 115 SFG G I+AGYN + + I+ G++GDV Y + V + ++ + Sbjct: 66 SFGNVKPDGFLGGIYAGYNFDLGNSIVLGIDGDVTYNDVSKDIDVYSGDLAVGDFETKLR 125 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI-----TPIAIGGTAGVGVEVG 170 G++R R GY V D + Y G +G I + G TAG GV+ Sbjct: 126 WSGAVRARVGYAV-DRFMPYLAGGVAFGNIKNSGSIDGIGSFSESKTLTGWTAGAGVDYA 184 Query: 171 GLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205 +++L+ RLEYR + Y + + N + LGV KF Sbjct: 185 A-TDNLIVRLEYRYTDYGDKDIEFGGLNVNQDFKTNEVRLGVAYKF 229 >gi|39934247|ref|NP_946523.1| outer membrane protein [Rhodopseudomonas palustris CGA009] gi|39648095|emb|CAE26615.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 226 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%) Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133 G + GYN + I++G+EGD++++ AD+ + + G+ R R GY ++D +L Sbjct: 91 GGVQGGYNWQSGNIVFGLEGDIQFST---ADDTFAQYKFSNPWFGTGRGRIGYAMND-VL 146 Query: 134 LYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +YAT G Q + + G T G G E + L A++EY Sbjct: 147 IYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAPKLSAKVEY 194 >gi|85716040|ref|ZP_01047017.1| putative outer-membrane immunogenic protein precursor [Nitrobacter sp. Nb-311A] gi|85697238|gb|EAQ35119.1| putative outer-membrane immunogenic protein precursor [Nitrobacter sp. Nb-311A] Length = 206 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 26/191 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAG 59 M K +A + + A +AQAAD RA + N+ P+ + GPY G Sbjct: 1 MSKTLIAALATMASTALIGTAQAADFSYRAPY---------TVNQ--PLNAFSWAGPYLG 49 Query: 60 LSALYN-GSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI 116 + Y GS G G + AGYN + +++G+EGD++ A++ + Sbjct: 50 GNLGYAWGSVQNSLTKPDGVFGGVQAGYNWQSGSMVFGLEGDIQANA---ANDTFAAWKF 106 Query: 117 G----GSLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGG 171 G++R R GY S+ +L+Y T G + + ET E + G T GVG EV G Sbjct: 107 SNPWFGTVRGRLGYAFSN-VLVYGTGGLAFGKLRAETFALSE-SHTNAGWTVGVGAEV-G 163 Query: 172 LSESLVARLEY 182 + ++ A++EY Sbjct: 164 IYQNWTAKVEY 174 >gi|92118614|ref|YP_578343.1| putative outer-membrane immunogenic protein precursor [Nitrobacter hamburgensis X14] gi|91801508|gb|ABE63883.1| putative outer-membrane immunogenic protein precursor [Nitrobacter hamburgensis X14] Length = 206 Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 26/172 (15%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALY-NGSFGEEAHHNAG 77 +AQAAD R+ + N+ P+ + + GPY G + Y GS A G Sbjct: 20 TAQAADFSYRSPY---------TVNQ--PLNAYSWAGPYLGGNLGYAWGSVQNSATKPNG 68 Query: 78 --GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDS 131 G + AGYN + +++G+EGD++ AD+I + G++R R GY ++ Sbjct: 69 VFGGVQAGYNWQSGPLVFGLEGDIQANA---ADDIFARWKFSNPWFGTVRGRLGYAF-NN 124 Query: 132 LLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +L+Y T G A + ET E + G T GVG E G+ ++ A++EY Sbjct: 125 VLIYGTGGLAFGALRAETFGLSE-SHTNAGWTVGVGAEF-GIYQNWTAKVEY 174 >gi|241518381|ref|YP_002979009.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862794|gb|ACS60458.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 207 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 34/178 (19%) Query: 53 FNGPYAGL---SALYNGSF---GEEAHHNAGGSIFAG---YNVEDSCIMYGVEGDVRYTV 103 ++GPY G+ + NG F G A + G IF G YN + I+ G+EG++ + Sbjct: 39 WSGPYLGIDGGAGWLNGDFSAGGASASEDFNGGIFGGFVGYNFQFDNIVVGIEGNLEH-- 96 Query: 104 PVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEI 154 N + +G G++R R GY D L+Y G + Y + + Sbjct: 97 -----NWNEEEALGADVGTDWTGAVRGRVGYAF-DKALIYGAAGWTATRGYVDLPGLDKE 150 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLGVGMKF 205 T G T G G++ ++ ++ AR EYR + + + V+ + + G+G+KF Sbjct: 151 TETFNGYTVGAGLDF-AITNNIFARGEYRYNDFGEKDVLGVDVDLDQHELKFGIGVKF 207 >gi|218517219|ref|ZP_03514059.1| outer membrane protein [Rhizobium etli 8C-3] Length = 153 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 15/136 (11%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 FAGYN + I+ G+EG++ Y L ++ + G++R R GY D L+Y Sbjct: 22 FAGYNFQFDNIVVGIEGNLEYNWNEEEALGADVGT--DWAGAVRGRVGYAF-DKALIYGA 78 Query: 138 VGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------- 189 G + Y + + T G T G GV+ ++ ++ AR EYR + Y + Sbjct: 79 AGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNNIFARGEYRYNDYGERDILGVD 137 Query: 190 VEGFYNTISLGVGMKF 205 V+ + + G+G+KF Sbjct: 138 VDLDQHELKFGIGVKF 153 >gi|153011627|ref|YP_001372841.1| porin [Ochrobactrum anthropi ATCC 49188] gi|151563515|gb|ABS17012.1| porin [Ochrobactrum anthropi ATCC 49188] Length = 228 Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 36/160 (22%) Query: 78 GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHG-----------IGGSLRIRGG 125 G ++AGYN + + + GV+GD+ Y L DN + G G++R R G Sbjct: 73 GGLYAGYNFDVGNNFILGVDGDITYNN--LKDNYSATDGDIAGDLESKLRWSGAVRARAG 130 Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGE-ITPIAI-------GGTAGVGVEVGGLSESLV 177 D + Y G T A + + I++ G TAG GV+ +++L+ Sbjct: 131 VAF-DRFMPYIAGGVAFGSVKNTLSATDGVDEISVSQSKTYTGWTAGAGVDYAA-TDNLI 188 Query: 178 ARLEYRASKYSK----------VEGFYNT--ISLGVGMKF 205 RLEYR + Y K VE + T + LGV KF Sbjct: 189 LRLEYRYTDYGKKDFDFGTDVSVEDKFKTHDVRLGVAYKF 228 >gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2] gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2] Length = 255 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 27/142 (19%) Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-----------VP---VLADNIHS 112 +FG + GG+ GYN++ + + G+EG V T VP V N+H+ Sbjct: 71 NFGNSGNGVIGGA-HVGYNLQLNQFVVGLEGSVDGTSLSKTYSGTAFVPGFGVAGINLHT 129 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--GGTAGVGVEVG 170 I GS+R R GY D +L+YAT G A KA TP + T VG VG Sbjct: 130 SADIQGSIRGRVGYAW-DRVLVYATGGVAFAGV----KASLSTPFSYDSSSTTKVGWTVG 184 Query: 171 G-----LSESLVARLEYRASKY 187 G ++ + R EYR S + Sbjct: 185 GGLEYAVTNNWSIRAEYRYSNF 206 >gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380] Length = 373 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 84/201 (41%), Gaps = 30/201 (14%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ VS LALAS AQAA A+ G + + + FN Y+ Sbjct: 1 MKKTVIALAVSGLALASV--AQAAPQQNTAYAGAK-----VGWASFHEGVRQFNDKYSN- 52 Query: 61 SALYNG---SFGEEAHHNAGGSIFAGYNVEDSC-------IMYGVEGDVRYTVPVLADNI 110 A YN ++G + G +F GY + + + Y G VR V + Sbjct: 53 DARYNSDTTAYGINRNSVTYG-VFGGYQILNQNNFGLAAELGYDYYGRVRGNVGDFREFK 111 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEIT----PIAIGGT 162 HS HG+ + ++ YEV +L +Y VG V + Y E T + Sbjct: 112 HSAHGL--NFALKPSYEVLPNLDVYGKVGVAVVRNDYKFYGAENTNEPTEKFHKLKASTI 169 Query: 163 AGVGVEVGGLSESLVARLEYR 183 G GVE L E L AR+EY+ Sbjct: 170 LGAGVEYAILPE-LAARIEYQ 189 >gi|194228056|ref|XP_001914937.1| PREDICTED: similar to Gene model 784, (NCBI) [Equus caballus] Length = 1407 Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 18/123 (14%) Query: 14 ALASFCSAQAADPVRRAHHGGRGVVPTIAT-NRYVPIRHDFNG--PYAGLSALYNGSFGE 70 A FC QA + V GG G+V T AT VP+ H+ P S+ + E Sbjct: 1028 ATTYFCRVQAVNTVGVGMFGGTGIVTTPATVPAVVPMLHEVENKVPAKLASSCIAIEWEE 1087 Query: 71 EAHHNAGGSIFAGYNVE------------DSCIMYGVEGDVRYTVPVLADNIHSLHGIGG 118 H GS GYNVE C++ ++ D Y + + A N + L Sbjct: 1088 PDCH---GSPITGYNVEYGDRKLLTVDRVTECLLKNLQPDTTYKIRIQAINHYGLSPFSQ 1144 Query: 119 SLR 121 S+R Sbjct: 1145 SIR 1147 >gi|86749266|ref|YP_485762.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86572294|gb|ABD06851.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 274 Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 27/138 (19%) Query: 68 FGEEAHHNAGGSIFAG----YNVEDSCIMYGVEGDVRYT------------VPVLADNIH 111 FG + + +GG FAG YN + +++G+EGD + P L D Sbjct: 96 FGSQKYDTSGG--FAGGVVGYNWQSGAVVFGLEGDYHWADINGTSSVINVGPPNLGDTYS 153 Query: 112 S-LHGIGGSLRIRGGYEVSDSLLLY---ATVGPDVAQKYETGKAGEI--TPIAIGGTAGV 165 + L G G ++ R GY +L A VG D+ +Y+ G A G T G Sbjct: 154 TKLRGF-GDIKGRLGYAAGPALWFVSGGAAVG-DLQHRYDGGAANTFVQNKTKWGYTVGA 211 Query: 166 GVEVGGLSESLVARLEYR 183 GVE + S A+LEY Sbjct: 212 GVEY-MFAPSWSAKLEYN 228 >gi|119476867|ref|ZP_01617148.1| Anaerobic dehydrogenase, typically selenocysteine-containing [marine gamma proteobacterium HTCC2143] gi|119449674|gb|EAW30911.1| Anaerobic dehydrogenase, typically selenocysteine-containing [marine gamma proteobacterium HTCC2143] Length = 887 Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%) Query: 148 TGKAGEIT--PIAIGG--TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT--ISLGV 201 TGK G++ P +I G A G EVGGL+ L A ++Y + V F+N+ +S V Sbjct: 314 TGKLGKVGAGPFSITGQPNAMGGREVGGLANMLAAHMDYTPDNIATVSEFWNSTAVSQQV 373 Query: 202 GMK 204 G+K Sbjct: 374 GLK 376 >gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi] gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi] Length = 364 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 78/210 (37%), Gaps = 36/210 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH---DFNGPY 57 M+K +A+ V+ A+AS +A A+ G + H FN Y Sbjct: 1 MKKSLVALAVAGFAVASANAAPEANSFYVGAKAG-----------WATFHHGVNQFNSKY 49 Query: 58 AGLSALYNGSFGEEAHHNAGG-SIFAGYNVEDSCIM---YGVEGDVRYTV---PVLADNI 110 A +G + N+ +F GY + D+ + Y G VR V D Sbjct: 50 ANDERYSDGPTAYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGRVRGNVGDRRAFKDTK 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGP-----DVAQKYETGKAGEITPIAIGGTAGV 165 H H + ++ YEV L LY VG D Y G + + G Sbjct: 110 HGAH-----ISLKPSYEVVSGLDLYGKVGAALVRNDYKDYYANGTKDKSHNLKTSLILGA 164 Query: 166 GVEVGGLSESLVARLEY----RASKYSKVE 191 GVE ++ +L ARLEY RA Y K E Sbjct: 165 GVEY-AITPALAARLEYQWLSRAGNYGKAE 193 >gi|75676711|ref|YP_319132.1| putative outer-membrane immunogenic protein precursor [Nitrobacter winogradskyi Nb-255] gi|74421581|gb|ABA05780.1| putative outer-membrane immunogenic protein precursor [Nitrobacter winogradskyi Nb-255] Length = 206 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 11/110 (10%) Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLL 133 G + AG+N + +++G+EGD++ A++ + G++R R GY +++L Sbjct: 71 GGVQAGFNWQSGPVVFGLEGDIQANA---ANDTFAAWKFSNPWFGTVRGRIGYAF-NNVL 126 Query: 134 LYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +Y T G + + ET E + + G T GVG EV G+ ++ A++EY Sbjct: 127 VYGTGGLAFGKLRAETFGLSE-SHTSAGWTVGVGAEV-GIYQNWTAKVEY 174 >gi|115522948|ref|YP_779859.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisA53] gi|115516895|gb|ABJ04879.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisA53] Length = 207 Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 31/177 (17%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYNGSFGEEAHHNAG 77 SAQAAD GR P P+ + + GPY G + Y ++G+ H+N+ Sbjct: 17 VSAQAADLSY-----GRSYAPYTVNQ---PLNAYSWAGPYLGGNLGY--AWGD-IHNNSA 65 Query: 78 ------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYE 127 G I GYN + ++YG+EGD++ T A++ + + G++R R GY Sbjct: 66 KPSGLSGGIQGGYNWQSGQMVYGLEGDLQITG---ANDTFAQYKFSNPWFGTVRGRIGYA 122 Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITP--IAIGGTAGVGVEVGGLSESLVARLEY 182 ++++ Y T G +A T + G ++ G T G G E GL + A++EY Sbjct: 123 F-NNVMFYGTGG--LAYGELTAEMGGLSQSHTNAGFTVGAGAEF-GLMPNWTAKIEY 175 >gi|296104524|ref|YP_003614670.1| putative outer membrane protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058983|gb|ADF63721.1| putative outer membrane protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 204 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 26/124 (20%) Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS----LHGIGGSLRIRGGYEV 128 H N GG ++AGY + +EG Y + HS + G + ++ Y V Sbjct: 62 HDNVGGGVYAGYQM---TPWLALEGGYDYLGNMQIKGKHSAGAQMKSQGLQMSLKASYAV 118 Query: 129 SDSLLLYATVG-------PDVA--QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 +DS +Y G DV+ ++ETG + P+ A VG E +++L R Sbjct: 119 TDSWDIYGRAGAMAYRAESDVSGHNRFETG----VRPL-----AAVGTEY-AFNKNLAGR 168 Query: 180 LEYR 183 LEY+ Sbjct: 169 LEYQ 172 >gi|254470997|ref|ZP_05084400.1| outer membrane protein [Pseudovibrio sp. JE062] gi|211960139|gb|EEA95336.1| outer membrane protein [Pseudovibrio sp. JE062] Length = 201 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGS----------IFAGYNVEDSCIMYGVEGDV--- 99 ++G Y GL G FG+ + GS F GYN I+ GVE D+ Sbjct: 28 WDGFYLGL----KGGFGQLTGKDTLGSKGTLDSGVVGAFGGYNHSFDRIVVGVEADLNAT 83 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----KYETGKAGEIT 155 YT + S S +R GY+ L Y + G +A+ ++ G+ E T Sbjct: 84 NYTSVSDSGVSRSRSKWNTSATVRLGYDAG-MFLPYLSAGVGLAEYEVKRFADGQKSENT 142 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------VEGFYNTISLGVGM 203 I + G G+E ++E++ ARL+Y+ + SK +EG + ++LGV Sbjct: 143 HIGL--VVGAGLEA-MITENVSARLDYKHMEMSKEKYKFQGFNAFHIEGRQDLVTLGVAY 199 Query: 204 KF 205 F Sbjct: 200 NF 201 >gi|217977073|ref|YP_002361220.1| porin [Methylocella silvestris BL2] gi|217502449|gb|ACK49858.1| porin [Methylocella silvestris BL2] Length = 239 Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 11/114 (9%) Query: 83 GYNVEDSCIMYGVEGDVRYT----VPVLADNIHSLH-GIGGSLRIRGGYEVSDSLLLYAT 137 GYN++ + I+ G+EGDV T +++ + GS+R R G+ V D L Y T Sbjct: 85 GYNLQFNQIVLGLEGDVEATGVDKTYAFGPTVYTTQIPVQGSIRARFGFAV-DRALFYVT 143 Query: 138 VG---PDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 G V +Y++ + G T G G+E L+ + R EYR S + Sbjct: 144 GGAAFASVTNQYQSYLGYNSLNRSFAGWTIGGGLEY-ALTNNWSVRAEYRYSDF 196 Searching..................................................done Results from round 2 >gi|254780598|ref|YP_003065011.1| outer membrane protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040275|gb|ACT57071.1| outer membrane protein [Candidatus Liberibacter asiaticus str. psy62] Length = 205 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL Sbjct: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL Sbjct: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL Sbjct: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 Query: 181 EYRASKYSKVEGFYNTISLGVGMKF 205 EYRASKYSKVEGFYNTISLGVGMKF Sbjct: 181 EYRASKYSKVEGFYNTISLGVGMKF 205 >gi|294852064|ref|ZP_06792737.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] gi|294820653|gb|EFG37652.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] Length = 305 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 259 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305 >gi|297248070|ref|ZP_06931788.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5 str. B3196] gi|297175239|gb|EFH34586.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5 str. B3196] Length = 305 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 259 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305 >gi|189023912|ref|YP_001934680.1| OmpA-like transmembrane domain protein [Brucella abortus S19] gi|225627199|ref|ZP_03785237.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|237815152|ref|ZP_04594150.1| Porin subfamily protein [Brucella abortus str. 2308 A] gi|260566721|ref|ZP_05837191.1| outer membrane protein [Brucella suis bv. 4 str. 40] gi|189019484|gb|ACD72206.1| OmpA-like transmembrane domain protein [Brucella abortus S19] gi|225618034|gb|EEH15078.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|237789989|gb|EEP64199.1| Porin subfamily protein [Brucella abortus str. 2308 A] gi|260156239|gb|EEW91319.1| outer membrane protein [Brucella suis bv. 4 str. 40] Length = 305 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 93 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 144 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 145 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 201 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 202 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 259 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 260 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 305 >gi|148560659|ref|YP_001258682.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840] gi|3914204|sp|Q45335|OM25_BRUO2 RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457929|gb|AAB06702.1| 25 kDa outer membrane protein [Brucella ovis] gi|148371916|gb|ABQ61895.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840] Length = 201 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEG+ Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKLDTQD-IRVGIGYKF 201 >gi|239831535|ref|ZP_04679864.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301] gi|239823802|gb|EEQ95370.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301] Length = 266 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V S+ L +A AAD ++ P + + ++ + G Y GL Sbjct: 54 MRTLKSLVIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL 105 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLADN-I 110 Y G + N GSI +AG+N + +YGVEGD Y+ + N + Sbjct: 106 ---YLGYGWNKVKTNTDGSIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKNGL 162 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G Q + + +G TAG G+E Sbjct: 163 EVKEGFEGSLRGRLGYDL-NPVMPYITAGVAGKQVKLDNGFDDESKFRVGWTAGAGLEA- 220 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR +++ + + I +GVG KF Sbjct: 221 KLTDNILGRVEYRYTQFGNKTYDLGTESVRNKLDTHDIRVGVGYKF 266 >gi|254718838|ref|ZP_05180649.1| OmpA-like transmembrane domain protein [Brucella sp. 83/13] gi|265983822|ref|ZP_06096557.1| outer-membrane immunogenic protein [Brucella sp. 83/13] gi|306838760|ref|ZP_07471594.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653] gi|306843662|ref|ZP_07476262.1| OmpA-like transmembrane domain protein [Brucella sp. BO1] gi|206596726|emb|CAQ68393.1| outer membrane protein 25 [Brucella sp. BO1] gi|264662414|gb|EEZ32675.1| outer-membrane immunogenic protein [Brucella sp. 83/13] gi|306275972|gb|EFM57681.1| OmpA-like transmembrane domain protein [Brucella sp. BO1] gi|306406162|gb|EFM62407.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653] Length = 213 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTNVRNKLDTQDIRVGIGYKF 213 >gi|23501588|ref|NP_697715.1| outer-membrane protein Omp25 [Brucella suis 1330] gi|62289663|ref|YP_221456.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941] gi|82699590|ref|YP_414164.1| OmpA-like transmembrane domain-containing protein [Brucella melitensis biovar Abortus 2308] gi|163842972|ref|YP_001627376.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis ATCC 23445] gi|254688973|ref|ZP_05152227.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 6 str. 870] gi|254697107|ref|ZP_05158935.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 2 str. 86/8/59] gi|254701484|ref|ZP_05163312.1| OmpA-like transmembrane domain protein [Brucella suis bv. 5 str. 513] gi|254704031|ref|ZP_05165859.1| OmpA-like transmembrane domain protein [Brucella suis bv. 3 str. 686] gi|254707067|ref|ZP_05168895.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis M163/99/10] gi|254709823|ref|ZP_05171634.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis B2/94] gi|254713826|ref|ZP_05175637.1| OmpA-like transmembrane domain protein [Brucella ceti M644/93/1] gi|254717116|ref|ZP_05178927.1| OmpA-like transmembrane domain protein [Brucella ceti M13/05/1] gi|254730003|ref|ZP_05188581.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 4 str. 292] gi|256031313|ref|ZP_05444927.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis M292/94/1] gi|256159433|ref|ZP_05457205.1| OmpA-like transmembrane domain protein [Brucella ceti M490/95/1] gi|256254721|ref|ZP_05460257.1| OmpA-like transmembrane domain protein [Brucella ceti B1/94] gi|256257221|ref|ZP_05462757.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 9 str. C68] gi|256369135|ref|YP_003106643.1| outer-membrane protein Omp25 [Brucella microti CCM 4915] gi|260168451|ref|ZP_05755262.1| OmpA-like transmembrane domain protein [Brucella sp. F5/99] gi|260545586|ref|ZP_05821327.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038] gi|260754463|ref|ZP_05866811.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260757682|ref|ZP_05870030.1| outer-membrane protein [Brucella abortus bv. 4 str. 292] gi|260761509|ref|ZP_05873852.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883492|ref|ZP_05895106.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str. C68] gi|261218931|ref|ZP_05933212.1| outer membrane protein [Brucella ceti M13/05/1] gi|261221901|ref|ZP_05936182.1| outer-membrane immunogenic protein [Brucella ceti B1/94] gi|261314536|ref|ZP_05953733.1| outer membrane protein [Brucella pinnipedialis M163/99/10] gi|261317361|ref|ZP_05956558.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94] gi|261321570|ref|ZP_05960767.1| outer membrane protein Omp25 [Brucella ceti M644/93/1] gi|261752028|ref|ZP_05995737.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513] gi|261754686|ref|ZP_05998395.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686] gi|261757914|ref|ZP_06001623.1| outer-membrane immunogenic protein [Brucella sp. F5/99] gi|265988399|ref|ZP_06100956.1| outer-membrane immunogenic protein [Brucella pinnipedialis M292/94/1] gi|265997865|ref|ZP_06110422.1| outer-membrane protein [Brucella ceti M490/95/1] gi|3914205|sp|Q45689|OM25_BRUSU RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|68067868|sp|Q44664|OM25_BRUAB RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457937|gb|AAB36695.1| 25 kDa outer membrane protein [Brucella suis 1330] gi|23347502|gb|AAN29630.1| outer-membrane protein Omp25 [Brucella suis 1330] gi|46251178|gb|AAS84560.1| Omp25 [Brucella ceti] gi|46251180|gb|AAS84561.1| Omp25 [Brucella ceti] gi|46251182|gb|AAS84562.1| Omp25 [Brucella pinnipedialis] gi|46251184|gb|AAS84563.1| Omp25 [Brucella ceti] gi|62195795|gb|AAX74095.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941] gi|82615691|emb|CAJ10678.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus 2308] gi|157310307|emb|CAN43865.1| outer membrane protein 25 [Brucella microti CCM 4915] gi|157310309|emb|CAN43866.1| outer membrane protein 25 [Brucella microti] gi|163673695|gb|ABY37806.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis ATCC 23445] gi|255999295|gb|ACU47694.1| outer-membrane protein Omp25 [Brucella microti CCM 4915] gi|260096993|gb|EEW80868.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038] gi|260668000|gb|EEX54940.1| outer-membrane protein [Brucella abortus bv. 4 str. 292] gi|260671941|gb|EEX58762.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674571|gb|EEX61392.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260873020|gb|EEX80089.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str. C68] gi|260920485|gb|EEX87138.1| outer-membrane immunogenic protein [Brucella ceti B1/94] gi|260924020|gb|EEX90588.1| outer membrane protein [Brucella ceti M13/05/1] gi|261294260|gb|EEX97756.1| outer membrane protein Omp25 [Brucella ceti M644/93/1] gi|261296584|gb|EEY00081.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94] gi|261303562|gb|EEY07059.1| outer membrane protein [Brucella pinnipedialis M163/99/10] gi|261737898|gb|EEY25894.1| outer-membrane immunogenic protein [Brucella sp. F5/99] gi|261741781|gb|EEY29707.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513] gi|261744439|gb|EEY32365.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686] gi|262552333|gb|EEZ08323.1| outer-membrane protein [Brucella ceti M490/95/1] gi|264660596|gb|EEZ30857.1| outer-membrane immunogenic protein [Brucella pinnipedialis M292/94/1] Length = 213 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|254693454|ref|ZP_05155282.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 3 str. Tulya] gi|261213709|ref|ZP_05927990.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|260915316|gb|EEX82177.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] Length = 213 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRTKLDTQDIRVGIGYKF 213 >gi|306842032|ref|ZP_07474705.1| OmpA-like transmembrane domain protein [Brucella sp. BO2] gi|306287873|gb|EFM59293.1| OmpA-like transmembrane domain protein [Brucella sp. BO2] Length = 213 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGLGYKF 213 >gi|161618670|ref|YP_001592557.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis ATCC 23365] gi|161335481|gb|ABX61786.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis ATCC 23365] Length = 213 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|17987532|ref|NP_540166.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225852222|ref|YP_002732455.1| OmpA-like transmembrane domain-containing protein [Brucella melitensis ATCC 23457] gi|256044394|ref|ZP_05447298.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 1 str. Rev.1] gi|256264270|ref|ZP_05466802.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9] gi|260563745|ref|ZP_05834231.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. 16M] gi|265990813|ref|ZP_06103370.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. Rev.1] gi|3914202|sp|Q45321|OM25_BRUME RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457927|gb|AAB06701.1| 25 kDa outer membrane protein [Brucella melitensis] gi|17983234|gb|AAL52430.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225640587|gb|ACO00501.1| OmpA-like transmembrane domain protein [Brucella melitensis ATCC 23457] gi|260153761|gb|EEW88853.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. 16M] gi|263001597|gb|EEZ14172.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094531|gb|EEZ18340.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9] gi|326408721|gb|ADZ65786.1| OmpA-like transmembrane domain protein [Brucella melitensis M28] gi|326538444|gb|ADZ86659.1| OmpA-like transmembrane domain protein [Brucella melitensis M5-90] Length = 213 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF 213 >gi|256113236|ref|ZP_05454104.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 3 str. Ether] gi|265994648|ref|ZP_06107205.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str. Ether] gi|262765761|gb|EEZ11550.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str. Ether] Length = 213 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDFRVGIGYKF 213 >gi|3914201|sp|Q45110|OM25_BRUCA RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457931|gb|AAB36692.1| 25 kDa outer membrane protein [Brucella canis] Length = 213 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDGESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++YS + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYSNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|256060827|ref|ZP_05450987.1| OmpA-like transmembrane domain protein [Brucella neotomae 5K33] gi|261324818|ref|ZP_05964015.1| outer-membrane protein Omp25 [Brucella neotomae 5K33] gi|3914203|sp|Q45326|OM25_BRUNE RecName: Full=25 kDa outer-membrane immunogenic protein; Flags: Precursor gi|1457935|gb|AAB36694.1| 25 kDa outer membrane protein [Brucella neotomae] gi|261300798|gb|EEY04295.1| outer-membrane protein Omp25 [Brucella neotomae 5K33] Length = 213 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|153009914|ref|YP_001371129.1| porin [Ochrobactrum anthropi ATCC 49188] gi|151561802|gb|ABS15300.1| porin [Ochrobactrum anthropi ATCC 49188] Length = 213 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V S+ L +A AAD ++ P + + ++ + G Y GL Sbjct: 1 MRTLKSLVIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + G++ +AG+N + +YGVEGD Y+ D + Sbjct: 53 ---YLGYGWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLRARLGYDL-NPVMPYITAGVAGSQVKLDNGFDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR +++ + + I +GVG KF Sbjct: 168 KLTDNILGRVEYRYTQFGNKTYDLGNESVRNKLDTHDIRVGVGYKF 213 >gi|769745|emb|CAA55872.1| immunogenic protein [Brucella abortus] gi|89741444|gb|ABD77595.1| 25 kDa outer membrane protein [Brucella abortus] Length = 213 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V VS+ L +A AAD ++ P + V ++ + G Y GL Sbjct: 1 MRTLKSLVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL 52 Query: 61 SALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNI 110 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 53 ---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGL 109 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSL R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EVKQGFEGSLGARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 167 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 L+++++ R+EYR ++Y + I +G+G KF Sbjct: 168 KLTDNILGRVEYRYTQYGNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213 >gi|327193361|gb|EGE60264.1| outer membrane protein [Rhizobium etli CNPAF512] Length = 211 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 22/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S+ A+A AQAAD V + +A + V ++ G Y G Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++ Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTNYGYTVGAGVEA-FVTNNIT 172 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 RLEYR + Y + N++ LG+G+KF Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|190891163|ref|YP_001977705.1| outer membrane protein [Rhizobium etli CIAT 652] gi|190696442|gb|ACE90527.1| outer membrane protein [Rhizobium etli CIAT 652] Length = 211 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 22/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S+ A+A AQAAD V + +A + V ++ G Y G Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY++ + LLY T G + + + + A G T G GVE ++ ++ Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNNIT 172 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 RLEYR + Y + N++ LG+G+KF Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248] Length = 211 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 22/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S A+A +AQAAD V + +A V + G Y G Sbjct: 1 MRVLIAGLMASVFAIAGVSAAQAADRVDQVPEA------PVAQEAPVKPAGSWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++ Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNNIT 172 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 RLEYR + Y + N++ LG+G+KF Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84] gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84] Length = 210 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 23/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + VS+ A+ F +A AAD V + P ++++G Y G Sbjct: 1 MRTLIKTLMVSAFAIGGFNAAYAADAVEQIPQ-------PPVAQEAAPAINNWSGFYIGG 53 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + +N G F + + GG F GYN + I+YGVE D+ Y + + + +G+ Sbjct: 54 AGDWNKGHFSRNGNGYGFGGEAFTGYNWQQGQIVYGVEADLGYAGIDSTRNGLTAKNGVN 113 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY+ + +LY T G + Q + + A+G T G G E ++ ++ Sbjct: 114 GSVRGRLGYDF-NPFMLYGTAGLAIGQNKLSDDTSSDSKTAVGYTVGAGAET-FITNNVT 171 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 ARLEYR + Y K ++ +G+G+KF Sbjct: 172 ARLEYRYTDYGKKNFDLDSGNFSRGYDEQSVKVGIGVKF 210 >gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 211 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 22/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S A+A +AQAAD V + +A + V ++ G Y G Sbjct: 1 MRVLIAGLMASVFAIAGLSAAQAADAVDQIPEA------PVAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++ Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNNIT 172 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 RLEYR + Y + N++ LG+G+KF Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56] Length = 211 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 22/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S+ A+A +AQAAD V + IA + V ++ G Y G Sbjct: 1 MRVLIAGLMASAFAIAGVSAAQAADAVDQVPEA------PIAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY++ + LLY T G + + + + A G T G GVE ++ ++ Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKTAYGYTVGAGVEA-FVTNNIT 172 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 RLEYR + Y + N++ LG+G+KF Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae] Length = 211 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 22/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S A+A +AQAAD V + +A V ++ G Y G Sbjct: 1 MRVLIAGLMASVFAIAGVSAAQAADAVDQVPEA------PVAQEAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++ Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLAIGDVKVSDDTSDESKTNFGYTVGAGVEA-FVTNNIT 172 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 RLEYR + Y + N++ LG+G+KF Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|209548691|ref|YP_002280608.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534447|gb|ACI54382.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 211 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 26/221 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP--IRHDFNGPYA 58 M+ L + S A+A +A +P + P + G Y Sbjct: 1 MRVLIAGLMASVFAIAGISAA--------QAADAVDQIPEAPVAQEAPVKPAGSWEGFYL 52 Query: 59 GLSALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHG 115 G + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 53 GGAGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYG 112 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GS+R R GY++ + LLY T G + + + + G T G GVE ++ + Sbjct: 113 WNGSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVGAGVEA-FVTNN 170 Query: 176 LVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 + RLEYR + Y + N++ LG+G+KF Sbjct: 171 ITTRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|86357119|ref|YP_469011.1| outer membrane protein [Rhizobium etli CFN 42] gi|86281221|gb|ABC90284.1| outer membrane protein [Rhizobium etli CFN 42] Length = 211 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 22/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S+ A+A +AQAAD V + +A + V ++ G Y G Sbjct: 1 MRVLIAGLMASAFAIAGVSAAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 GS+R R GY++ + LLY T G + + + + G T G GVE ++ ++ Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNVKVSDGTSDESKTNYGYTVGAGVEA-FVTNNIT 172 Query: 178 ARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 RLEYR + Y + N++ LG+G+KF Sbjct: 173 TRLEYRYTDYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 211 >gi|260469600|ref|ZP_05813765.1| OmpA domain protein transmembrane region-containing protein [Mesorhizobium opportunistum WSM2075] gi|259028626|gb|EEW29937.1| OmpA domain protein transmembrane region-containing protein [Mesorhizobium opportunistum WSM2075] Length = 217 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 98/218 (44%), Gaps = 29/218 (13%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 LAV + AL +A AAD V+ P + GPYAG++ Y Sbjct: 11 LAVALGLFALGG--TAYAADVVQEE--------PPAPAPVAELPVASWAGPYAGINLGYG 60 Query: 66 GSFGEEAHH--------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116 S + GS+F GY + +YG E ++ Y DN +HS G Sbjct: 61 FSGRTKEKDLGFETDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGVHSKGGF 120 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GSLR R GY V+ +LLY T G + K E G T +G TAG+G ++ L+++ Sbjct: 121 EGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDTFGSDTATMLGWTAGLGTDI-KLTDN 179 Query: 176 LVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205 + R+EYR + + KV+ N ++ G+GMKF Sbjct: 180 VFGRVEYRYTDFGSKSFDNIGKVKATDNRVTFGLGMKF 217 >gi|15964926|ref|NP_385279.1| outer membrane protein [Sinorhizobium meliloti 1021] gi|307300997|ref|ZP_07580766.1| porin [Sinorhizobium meliloti BL225C] gi|15074105|emb|CAC45752.1| Probable outer membrane protein [Sinorhizobium meliloti 1021] gi|306903952|gb|EFN34538.1| porin [Sinorhizobium meliloti BL225C] Length = 212 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L + S++AL +F +A AAD V VP Y P +++G Y G Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114 + ++ + +N G ++ GYNV+D ++YG E DV YT + Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYNVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++ Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170 Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 ++ AR EYR + Y + +++ LG+G+KF Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212 >gi|150396008|ref|YP_001326475.1| porin [Sinorhizobium medicae WSM419] gi|150027523|gb|ABR59640.1| porin [Sinorhizobium medicae WSM419] Length = 212 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L + S++AL +F +A AAD V +P Y P +++G Y G Sbjct: 1 MRMLTTTLMASAMALVAFQAAHAADVVDE--------IPAAPAAEYTEPAVRNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114 + ++ + +N G ++ GYNV+D ++YG E D+ YT + Sbjct: 53 GTIDWHHGEADATGNNKSVGTGGGLYGGYNVQDGQMVYGGEADINYTGNDSHSSGRRVQQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GS+R R G +V + +L+Y T G + AG +G TAGVG E +++ Sbjct: 113 GLNGSVRARVGVDV-NPVLVYGTAGVALGNAELKTPAGSDDKTLVGWTAGVGAET-FVTD 170 Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 ++ AR EYR + Y + + + LG+G+KF Sbjct: 171 NITARAEYRYTDYGSKDFRTGGTTISSGYDEHAVKLGMGVKF 212 >gi|307317731|ref|ZP_07597169.1| porin [Sinorhizobium meliloti AK83] gi|306896493|gb|EFN27241.1| porin [Sinorhizobium meliloti AK83] Length = 212 Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L + S++AL +F +A AAD V VP Y P +++G Y G Sbjct: 1 MRTLTTTLMASAMALVAFQAAHAADVVDE--------VPAAPAAEYTEPAVRNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114 + ++ + +N G ++ GY+V+D ++YG E DV YT + Sbjct: 53 GTIDWHHGEADATGNNKSVGFGGGLYGGYDVQDGQMVYGGEADVNYTGNDSRSSGRRVKQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GS+R R G ++ + +L+Y T G + + AG +G TAGVG E +++ Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGVALGNAKLSTPAGSDDKTLVGWTAGVGAET-FVTD 170 Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 ++ AR EYR + Y + +++ LG+G+KF Sbjct: 171 NITARAEYRYTDYGSKDFRAGGSTISSGYDEHSVKLGMGVKF 212 >gi|13476553|ref|NP_108123.1| outer membrane protein [Mesorhizobium loti MAFF303099] gi|14027314|dbj|BAB54268.1| outer membrane protein [Mesorhizobium loti MAFF303099] Length = 218 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 93/219 (42%), Gaps = 30/219 (13%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 LAV + AL +A AAD V+ P + GPYAGL+ Y Sbjct: 11 LAVALGLFALGG--TAYAADVVQEE--------PPAPAPVAELPVASWAGPYAGLNVGYG 60 Query: 66 GSFGEEAHH--------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116 S + GS+F GY + +YG E ++ Y DN I+S G Sbjct: 61 FSGRTKEKDFDVSTDTKGFVGSVFGGYQWQQENFVYGGEAELGYNGVKGDDNGINSKAGF 120 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK--AGEITPIAIGGTAGVGVEVGGLSE 174 GSLR R GY V+ +LLY T G +G TAGVG ++ L++ Sbjct: 121 EGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDTVLGVSDRATMLGWTAGVGTDI-KLTD 179 Query: 175 SLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205 ++ R+EYR + + KV+ N ++ GVGMKF Sbjct: 180 NVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 218 >gi|319784400|ref|YP_004143876.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170288|gb|ADV13826.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 220 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 34/222 (15%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 LAV + AL+ +A AAD V P + GPYAGL+ Y Sbjct: 11 LAVALGLFALSG--TAYAADVVSEE--------PPAPAPIAELPVASWAGPYAGLNVGY- 59 Query: 66 GSFGEEAHHNAG------------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHS 112 G G + G GS+F GY + +YG E ++ Y D ++S Sbjct: 60 GFSGHTKEKDLGVDNVDVGTKGFVGSVFGGYQWQQENFVYGAEAELGYNGVKGDDSGVNS 119 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDV-AQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G GSLR R GY V+ +LLY T G + K E G +G TAG+G ++ Sbjct: 120 KAGFEGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDDVYGSDRATLLGWTAGLGTDI-K 178 Query: 172 LSESLVARLEYRASKY--------SKVEGFYNTISLGVGMKF 205 L++++ R+EYR + + KV+ N ++ GVGMKF Sbjct: 179 LTDNVFGRVEYRYTDFGSKSFDGIGKVKATDNRVTFGVGMKF 220 >gi|315121798|ref|YP_004062287.1| outer membrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495200|gb|ADR51799.1| outer membrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 231 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 28/232 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVR-----RAHHGGRGVVPTIA-TNRYVPIRHDFN 54 M+K FLAVGVS+L L SF + QAAD V+ + RGVVPT+ NRYV + Sbjct: 1 MKKFFLAVGVSTLTLVSFSAVQAADAVQRPQRRQHASVSRGVVPTVVSANRYVYSQQGIE 60 Query: 55 GPYAGLSALYNGSF-GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN---- 109 GPYAG+S + +F G++ + + GGS+FAGYNV++ YG E D RY+ + + Sbjct: 61 GPYAGMSIFHERNFSGKDHNKDIGGSLFAGYNVQEGDFFYGAEADARYSHDIASKEHKAA 120 Query: 110 ------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----KYETGKAGE 153 ++ GSLR RGGYE++ +++Y TVG A Sbjct: 121 RLDQKDDAAVSKMYHAADFSGSLRFRGGYEIAAPVVVYGTVGVAAVHKASKAPADAAASP 180 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 IGGTAG+GVE L ++++ R+EYRA+KYS V N +SLG+G++F Sbjct: 181 AKAFYIGGTAGLGVE-SVLVDNIIGRVEYRATKYSGVSHLQNVVSLGLGIRF 231 >gi|218663696|ref|ZP_03519626.1| outer membrane protein [Rhizobium etli IE4771] Length = 203 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 22/211 (10%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-GS 67 S+ A+A +AQAAD V + +A + V ++ G Y G + YN G Sbjct: 1 MASAFAIAGVSAAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGGAGTYNMGD 54 Query: 68 FGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIGGSLRIRGG 125 FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G GS+R R G Sbjct: 55 FGSDRHTYGFGGQVFTGYNWQAGQIVYGVESDLGYSGDDVSSGGVENKYGWNGSVRGRVG 114 Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 Y++ + LLY T G + + + + A G T G GVE ++ ++ RLEYR + Sbjct: 115 YDM-NPFLLYGTAGLALGNIKVSDDTSDESKTAYGYTVGAGVEA-FVTNNITTRLEYRYT 172 Query: 186 KYSKVE-----------GFYNTISLGVGMKF 205 Y + N++ LG+G+KF Sbjct: 173 DYQSKDYDLDSGSFSRGYDENSVKLGIGVKF 203 >gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4] gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4] Length = 212 Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAG 59 M+ L + + SS L+ A AAD V VP +P ++ G Y G Sbjct: 1 MRTLVMILLASSAGLSLVTGAHAADAVMS--------VPEAPAAVDMPAPVSNWAGAYVG 52 Query: 60 LSALYNGSFGEEAHHN---AGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLH 114 + Y + + GG ++ GYN+++ I+YG E D+ Y ++ Sbjct: 53 GAGTYTMGRSHGSKFSARAFGGQVYGGYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGKQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GS+R R GY++ + ++Y T G A +G G + A+G T G GVE ++ Sbjct: 113 GVNGSIRGRVGYDL-NPFMVYGTAGVAAADTKISGAGGSDSKAALGYTVGAGVEA-MVTN 170 Query: 175 SLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 ++ R+EYR + Y + ++ +G+GMKF Sbjct: 171 NITTRVEYRYTDYQNKDYNIGGSKVSRGFDDQSVKVGIGMKF 212 >gi|227821495|ref|YP_002825465.1| putative outer membrane protein [Sinorhizobium fredii NGR234] gi|227340494|gb|ACP24712.1| putative outer membrane protein [Sinorhizobium fredii NGR234] Length = 212 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L A+ S++ L +F +A AAD V +P Y P +++G Y G Sbjct: 1 MRTLTTALMASAITLVAFQAAHAADAVEE--------IPAAPAAEYTEPAVKNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHN----AGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114 +A ++ + +N GG ++ GYNV+D ++YG E DV Y + Sbjct: 53 GTANWHYGEADATGNNKSVAFGGGLYGGYNVQDGQMVYGGEADVNYAGNDSTSSGRKVKQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GSLR R G ++ + +L+Y T G + + AG +G TAG G E +++ Sbjct: 113 GVNGSLRGRVGVDM-NPVLVYGTAGLALGNAKLSTPAGSDDKTLVGWTAGAGAET-FVTD 170 Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 ++ AR+EYR + Y+ + +++ LG+G+KF Sbjct: 171 NVTARVEYRYTDYASKDFRAGGSTVSSGYDEHSVRLGMGVKF 212 >gi|159185080|ref|NP_355120.2| outer membrane protein [Agrobacterium tumefaciens str. C58] gi|159140353|gb|AAK87905.2| outer membrane protein [Agrobacterium tumefaciens str. C58] Length = 209 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 28/217 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + V+SL S +A AAD V P + ++GPY G+ Sbjct: 3 TLIVTSLLALSASTAMAADAVYE--------TPAPPVAQETLPVFTWSGPYLGIQGGAGW 54 Query: 67 SFGEEA------HHNAGGSI---FAGYNVE-DSCIMYGVEGDVRYTVPVLA-DNIHSLHG 115 + G+ + + G I FAGYN + D+ ++ G+EGDV Y I Sbjct: 55 ANGDFSAGGPVVSDDFNGGILGAFAGYNYQFDNNMVLGIEGDVDYNWNDNDYSGIKVGTD 114 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GS+R R GY D L+YAT G + + G+ G T G GV+ +++ Sbjct: 115 WQGSVRGRVGYAF-DHALIYATAGWTATRGFIETPVGDDKATFNGYTVGAGVDY-AFTDN 172 Query: 176 LVARLEYRASKYSKVEGF-------YNTISLGVGMKF 205 + RLEYR + Y + F +T+ +G+G+KF Sbjct: 173 VFGRLEYRYNDYGDKDIFGINTDFDQHTVKVGLGVKF 209 >gi|116251075|ref|YP_766913.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255723|emb|CAK06804.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|220979415|gb|ACL97989.1| outer membrane protein B2 [Rhizobium leguminosarum bv. viciae] Length = 205 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 26/213 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V ++L L+ A AAD P + V +D++G Y G Y+ Sbjct: 5 LVACAALTLSVAVPAVAADLTYE--------TPPAPSAGQVSSAYDWSGFYLGAQGGYSW 56 Query: 67 S----FGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 S G + ++G + AGYN + I+YG+E D Y N ++ S R Sbjct: 57 SQATILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGR 113 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 R GY +L K + AG+ I IG TAG G+E ++++++ R E Sbjct: 114 ARVGYAWDRTLFFATAGVAAGGGKVDIPAAGKKDGILIGWTAGGGIE-HAVTDNILVRAE 172 Query: 182 YRASKYSKVE---------GFYNTISLGVGMKF 205 YR S + + + + G KF Sbjct: 173 YRHSDFGNKDFGSTIGEVGATQDKVLFGTSYKF 205 >gi|241203671|ref|YP_002974767.1| hypothetical protein Rleg_0932 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857561|gb|ACS55228.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 205 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 84/213 (39%), Gaps = 26/213 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V + LAL+ A AAD P + V +D++G Y G Y+ Sbjct: 5 LVACAVLALSVAVPAVAADLTYE--------TPPAPSAGEVSSAYDWSGFYLGAQGGYSW 56 Query: 67 S----FGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 S G + ++G + AGYN + I+YG+E D Y N ++ S R Sbjct: 57 SQAKILGSDQDIDSGTSGLHAGYNFQSGNIVYGIENDFNYN---FEKNDNANLEWDASGR 113 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 R GY +L K + AG+ I IG TAG G+E ++++++ R E Sbjct: 114 ARVGYAWDRTLFFATAGVAAGGGKVDISAAGKKDGILIGWTAGGGIE-HAVTDNILVRGE 172 Query: 182 YRASKYSKVE---------GFYNTISLGVGMKF 205 YR S + + + + G KF Sbjct: 173 YRHSDFGNKDFGSTIGDVGATQDKVLFGTSYKF 205 >gi|209548422|ref|YP_002280339.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534178|gb|ACI54113.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 204 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 27/213 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + + LAL++ A AAD + ++++G Y G Y+ Sbjct: 5 LIACAVLALSAAVPAVAADLTYET---------PAPAAEQISSAYNWSGFYLGGQGGYSW 55 Query: 67 S----FGEEAHHNAG-GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 S G + + + G + AGYN + I+YG+E D Y D + S R Sbjct: 56 SQTKILGSDENIDGGTAGLHAGYNFQSGNIVYGIENDFNYNFKKNDD---ANLEWDASGR 112 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 R GY ++ +L K + AG+ I IG TAG G+E +++ ++ R E Sbjct: 113 ARVGYALNRTLFFATAGVAAGGGKVDIPTAGKKDGILIGWTAGGGIE-HAVTDHILVRGE 171 Query: 182 YRASKYSKVE---------GFYNTISLGVGMKF 205 YR S +S + + + G KF Sbjct: 172 YRHSDFSNKDFGSAIGDVGAKQDKVLFGTSYKF 204 >gi|146425515|emb|CAM89327.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425525|emb|CAM89318.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425535|emb|CAM89309.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425545|emb|CAM89300.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425565|emb|CAM89282.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425575|emb|CAM89273.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425585|emb|CAM89264.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425595|emb|CAM89255.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425605|emb|CAM89246.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425615|emb|CAM89237.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425625|emb|CAM89228.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425635|emb|CAM89219.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425645|emb|CAM89210.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425655|emb|CAM89201.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425665|emb|CAM89192.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425675|emb|CAM89183.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425685|emb|CAM89174.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425695|emb|CAM89165.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146425705|emb|CAM89156.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425715|emb|CAM89147.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425725|emb|CAM89138.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425735|emb|CAM89129.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425745|emb|CAM89120.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425755|emb|CAM89111.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425765|emb|CAM89102.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425775|emb|CAM89093.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425785|emb|CAM89084.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425795|emb|CAM89075.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425805|emb|CAM89066.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425815|emb|CAM89057.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425825|emb|CAM89048.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425835|emb|CAM89039.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425845|emb|CAM89030.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425855|emb|CAM89021.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425865|emb|CAM89012.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425875|emb|CAM89003.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425885|emb|CAM88994.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425895|emb|CAM88985.2| 25 kDa outer membrane protein [Brucella abortus] gi|146425905|emb|CAM88976.2| 25 kDa outer membrane protein [Brucella abortus] gi|146426370|emb|CAM89822.2| 25 kDa outer membrane protein [Brucella suis] gi|146426380|emb|CAM89813.2| 25 kDa outer membrane protein [Brucella suis] gi|146426390|emb|CAM89804.2| 25 kDa outer membrane protein [Brucella suis] gi|146426400|emb|CAM89795.2| 25 kDa outer membrane protein [Brucella suis] gi|146426410|emb|CAM89786.2| 25 kDa outer membrane protein [Brucella suis] gi|146426420|emb|CAM89777.2| 25 kDa outer membrane protein [Brucella suis] gi|146426430|emb|CAM89768.2| 25 kDa outer membrane protein [Brucella suis] gi|146426440|emb|CAM89759.2| 25 kDa outer membrane protein [Brucella suis] gi|146426450|emb|CAM89750.2| 25 kDa outer membrane protein [Brucella suis] gi|146426460|emb|CAM89741.2| 25 kDa outer membrane protein [Brucella suis] gi|146426470|emb|CAM89732.2| 25 kDa outer membrane protein [Brucella suis] gi|146426480|emb|CAM89723.2| 25 kDa outer membrane protein [Brucella suis] gi|146426490|emb|CAM89714.2| 25 kDa outer membrane protein [Brucella suis] gi|146426500|emb|CAM89705.2| 25 kDa outer membrane protein [Brucella suis] gi|146426510|emb|CAM89696.2| 25 kDa outer membrane protein [Brucella suis] gi|146426520|emb|CAM89687.2| 25 kDa outer membrane protein [Brucella suis] gi|146426530|emb|CAM89678.2| 25 kDa outer membrane protein [Brucella suis] gi|146426540|emb|CAM89669.2| 25 kDa outer membrane protein [Brucella suis] gi|146426550|emb|CAM89660.2| 25 kDa outer membrane protein [Brucella suis] gi|146426560|emb|CAM89651.2| 25 kDa outer membrane protein [Brucella suis] gi|146426570|emb|CAM89642.2| 25 kDa outer membrane protein [Brucella suis] gi|146426580|emb|CAM89633.2| 25 kDa outer membrane protein [Brucella suis] gi|146426590|emb|CAM89624.2| 25 kDa outer membrane protein [Brucella suis] gi|146426600|emb|CAM89615.2| 25 kDa outer membrane protein [Brucella suis] gi|146426610|emb|CAM89606.2| 25 kDa outer membrane protein [Brucella suis] gi|146426620|emb|CAM89597.2| 25 kDa outer membrane protein [Brucella suis] gi|146426630|emb|CAM89588.2| 25 kDa outer membrane protein [Brucella suis] gi|146426640|emb|CAM89579.2| 25 kDa outer membrane protein [Brucella suis] gi|146426650|emb|CAM89570.2| 25 kDa outer membrane protein [Brucella suis] gi|146426660|emb|CAM89561.2| 25 kDa outer membrane protein [Brucella suis] gi|146426670|emb|CAM89552.2| 25 kDa outer membrane protein [Brucella suis ATCC 23445] gi|146426680|emb|CAM89543.2| 25 kDa outer membrane protein [Brucella suis] gi|146426690|emb|CAM89534.2| 25 kDa outer membrane protein [Brucella suis] gi|146426700|emb|CAM89525.2| 25 kDa outer membrane protein [Brucella suis] gi|146426710|emb|CAM89516.2| 25 kDa outer membrane protein [Brucella suis] gi|146426720|emb|CAM89507.2| 25 kDa outer membrane protein [Brucella suis] gi|146426730|emb|CAM89498.2| 25 kDa outer membrane protein [Brucella suis] gi|146426740|emb|CAM89489.2| 25 kDa outer membrane protein [Brucella suis] gi|146426750|emb|CAM89480.2| 25 kDa outer membrane protein [Brucella suis] gi|146426760|emb|CAM89471.2| 25 kDa outer membrane protein [Brucella suis] gi|146426770|emb|CAM89462.2| 25 kDa outer membrane protein [Brucella suis] gi|146426780|emb|CAM89453.2| 25 kDa outer membrane protein [Brucella suis 1330] gi|146426900|emb|CAM89345.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146426910|emb|CAM89336.2| 25 kDa outer membrane protein [Brucella melitensis] gi|146427366|emb|CAM90326.2| 25 kDa outer membrane protein [Brucella sp. 5/95] gi|146427376|emb|CAM90317.2| 25 kDa outer membrane protein [Brucella sp. 59/94] gi|146427386|emb|CAM90308.2| 25 kDa outer membrane protein [Brucella sp. UK28/03-13840] gi|146427396|emb|CAM90299.2| 25 kDa outer membrane protein [Brucella sp. F7/99] gi|146427406|emb|CAM90290.2| 25 kDa outer membrane protein [Brucella sp. F10/99] gi|146427416|emb|CAM90281.2| 25 kDa outer membrane protein [Brucella sp. F9/99] gi|146427426|emb|CAM90272.2| 25 kDa outer membrane protein [Brucella sp. F8/99] gi|146427436|emb|CAM90263.2| 25 kDa outer membrane protein [Brucella sp. F6/99] gi|146427446|emb|CAM90254.2| 25 kDa outer membrane protein [Brucella sp. UK5/01] gi|146427456|emb|CAM90245.2| 25 kDa outer membrane protein [Brucella sp. UK40/99] gi|146427466|emb|CAM90236.2| 25 kDa outer membrane protein [Brucella sp. UK13/99] gi|146427476|emb|CAM90227.2| 25 kDa outer membrane protein [Brucella sp. 61/94] gi|146427486|emb|CAM90218.2| 25 kDa outer membrane protein [Brucella sp. 4/96] gi|146427496|emb|CAM90209.2| 25 kDa outer membrane protein [Brucella sp. 55/94] gi|146427506|emb|CAM90200.2| 25 kDa outer membrane protein [Brucella sp. UK24/00 (M192)] gi|146427516|emb|CAM90191.2| 25 kDa outer membrane protein [Brucella sp. 44/94] gi|146427526|emb|CAM90182.2| 25 kDa outer membrane protein [Brucella sp. 39/94] gi|146427536|emb|CAM90173.2| 25 kDa outer membrane protein [Brucella sp. UK31/04] gi|146427546|emb|CAM90164.2| 25 kDa outer membrane protein [Brucella sp. VLA04/06] gi|146427556|emb|CAM90155.2| 25 kDa outer membrane protein [Brucella sp. VLA04/105] gi|146427566|emb|CAM90146.2| 25 kDa outer membrane protein [Brucella sp. VLA04.72] gi|146427576|emb|CAM90137.2| 25 kDa outer membrane protein [Brucella sp. VLA04.67] gi|146427586|emb|CAM90128.2| 25 kDa outer membrane protein [Brucella sp. F96/2] gi|146427596|emb|CAM90119.2| 25 kDa outer membrane protein [Brucella sp. F23/97] gi|146427606|emb|CAM90110.2| 25 kDa outer membrane protein [Brucella sp. UK15/02] gi|146427616|emb|CAM90101.2| 25 kDa outer membrane protein [Brucella sp. UK10/01] gi|146427626|emb|CAM90092.2| 25 kDa outer membrane protein [Brucella sp. UK4/01] gi|146427636|emb|CAM90083.2| 25 kDa outer membrane protein [Brucella sp. UK10/00] gi|146427646|emb|CAM90074.2| 25 kDa outer membrane protein [Brucella sp. UK5/97] gi|146427656|emb|CAM90065.2| 25 kDa outer membrane protein [Brucella sp. UK3/97] gi|146427666|emb|CAM90056.2| 25 kDa outer membrane protein [Brucella sp. UK1/97] gi|146427676|emb|CAM90047.2| 25 kDa outer membrane protein [Brucella sp. 2/96] gi|146427686|emb|CAM90038.2| 25 kDa outer membrane protein [Brucella sp. 14/95] gi|146427696|emb|CAM90029.2| 25 kDa outer membrane protein [Brucella sp. UK35/99] gi|146427706|emb|CAM90020.2| 25 kDa outer membrane protein [Brucella sp. UK15/98] gi|146427716|emb|CAM90011.2| 25 kDa outer membrane protein [Brucella sp. 52/94] gi|146427726|emb|CAM90002.2| 25 kDa outer membrane protein [Brucella sp. 36/94] gi|146427846|emb|CAM89894.2| 25 kDa outer membrane protein [Brucella suis] gi|146427856|emb|CAM89885.2| 25 kDa outer membrane protein [Brucella suis] gi|146427866|emb|CAM89876.2| 25 kDa outer membrane protein [Brucella suis] gi|146427876|emb|CAM89867.2| 25 kDa outer membrane protein [Brucella suis] gi|146427886|emb|CAM89858.2| 25 kDa outer membrane protein [Brucella suis] gi|146427896|emb|CAM89849.2| 25 kDa outer membrane protein [Brucella suis] gi|146427906|emb|CAM89840.2| 25 kDa outer membrane protein [Brucella suis] gi|146427916|emb|CAM89831.2| 25 kDa outer membrane protein [Brucella suis] gi|146427988|emb|CAM90407.2| 25 kDa outer membrane protein [Brucella sp. F5/02] gi|146428001|emb|CAM90398.2| 25 kDa outer membrane protein [Brucella sp. F5/99] gi|146428011|emb|CAM90389.2| 25 kDa outer membrane protein [Brucella sp. VLA05/8] gi|146428021|emb|CAM90380.2| 25 kDa outer membrane protein [Brucella sp. VLA05/4] gi|146428031|emb|CAM90371.2| 25 kDa outer membrane protein [Brucella sp. UK3/05] gi|146428041|emb|CAM90362.2| 25 kDa outer membrane protein [Brucella sp. 14/94] gi|146428051|emb|CAM90353.2| 25 kDa outer membrane protein [Brucella sp. UK2/2000] gi|146428061|emb|CAM90344.2| 25 kDa outer membrane protein [Brucella sp. UK1/2000] gi|146428071|emb|CAM90335.2| 25 kDa outer membrane protein [Brucella sp. UK43/99] gi|170015689|emb|CAP05282.1| 25 kDa outer membrane protein [Brucella sp. BO1] Length = 163 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49 Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 +A + GSI FAG+N + I+YGVEGD Y+ + D + G Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161 >gi|325293521|ref|YP_004279385.1| Outer membrane protein [Agrobacterium sp. H13-3] gi|325061374|gb|ADY65065.1| Outer membrane protein [Agrobacterium sp. H13-3] Length = 210 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + V+SL S +A AAD V P + ++GPY G+ Sbjct: 3 TLIVTSLLALSASTAMAADAVYE--------TPAPPVAQETLPVFTWSGPYLGIQGGAGW 54 Query: 67 SFGEE------AHHNAGGSI---FAGYNVE-DSCIMYGVEGDVRYTVPVLA-DNIHSLHG 115 + G+ A + G I FAGYN + D+ + G+EGDV Y ++ Sbjct: 55 ANGDFSAGGPVASDSFDGGILGAFAGYNYQFDNNFVLGIEGDVDYNWNDNDYAGVNIGTD 114 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSE 174 GS+R R GY D L+Y T G + + AG+ + G T G G++ ++ Sbjct: 115 WQGSVRGRVGYAF-DRALIYGTAGWTATRGFIETPGAGKDSTTFNGYTVGAGLDY-AFTD 172 Query: 175 SLVARLEYRASKYSKVEGF-------YNTISLGVGMKF 205 ++ R+EYR + Y + F +T+ +G+G+KF Sbjct: 173 NVFGRIEYRYNDYGDKDIFGVNTDFDQSTVKVGLGVKF 210 >gi|146427796|emb|CAM89939.2| 25 kDa outer membrane protein [Brucella canis] gi|146427806|emb|CAM89930.2| 25 kDa outer membrane protein [Brucella canis] gi|146427816|emb|CAM89921.2| 25 kDa outer membrane protein [Brucella canis] gi|146427826|emb|CAM89912.2| 25 kDa outer membrane protein [Brucella canis] gi|146427836|emb|CAM89903.2| 25 kDa outer membrane protein [Brucella canis] Length = 163 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49 Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 +A + GSI FAG+N + I+YGVEGD Y+ + D + G Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161 >gi|31322670|gb|AAP22071.1| outer membrane protein [Sinorhizobium fredii] Length = 212 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 27/222 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAG 59 M+ L + S++AL + +A AAD V VP Y P +++G Y G Sbjct: 1 MRTLTTTLMASAIALVALQAAHAADAVDE--------VPAAPAAEYTDPAVKNWSGAYVG 52 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGY----NVEDSCIMYGVEGDVRYTV-PVLADNIHSLH 114 +A ++ + N G NV+D ++YG E DV Y + Sbjct: 53 GTANWHHGEADATGGNTSAGFGGGLYGGYNVQDGQMVYGGEADVNYAGNDSHSSGRRVKQ 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ GS+R R G ++ + +L+Y T G + + AG +G TAG G E +++ Sbjct: 113 GVNGSVRGRVGVDL-NPVLVYGTAGLALGNAKLSTPAGSDDKTLVGWTAGAGAET-FVTD 170 Query: 175 SLVARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 ++ AR+EYR + Y+ + +++ LG+G+KF Sbjct: 171 NVTARVEYRYTDYASKDFRTGGSTVSSGYDEHSVKLGMGVKF 212 >gi|146425555|emb|CAM89291.2| 25 kDa outer membrane protein [Brucella melitensis] Length = 163 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49 Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 +A + GSI FAG+N + I+YGVEGD Y+ + D + G Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA 161 >gi|146426790|emb|CAM89444.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426800|emb|CAM89435.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426810|emb|CAM89426.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426820|emb|CAM89417.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426830|emb|CAM89408.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426840|emb|CAM89399.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426850|emb|CAM89390.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426860|emb|CAM89381.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426870|emb|CAM89372.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426880|emb|CAM89363.2| 25 kDa outer membrane protein [Brucella ovis] gi|146426890|emb|CAM89354.2| 25 kDa outer membrane protein [Brucella ovis] Length = 163 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49 Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 +A + GSI FAG+N + I+YGVEG+ Y+ + D + G Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQGF 109 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161 >gi|15888468|ref|NP_354149.1| outer membrane protein [Agrobacterium tumefaciens str. C58] gi|18139945|gb|AAL60203.1|AF445083_1 outer membrane protein [Agrobacterium tumefaciens str. C58] gi|15156164|gb|AAK86934.1| outer membrane protein [Agrobacterium tumefaciens str. C58] Length = 218 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 33/228 (14%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAG 59 M+ + S++A A F +A AAD V VP P D++G Y G Sbjct: 1 MRIFVATLMASTMAAAGFSAAYAADAVNE--------VPQAPVAYDQPAAVKDWSGAYLG 52 Query: 60 LSALYNGSFGEEAHHNAGG-----SIFAGYNVEDSCIMYGVEGDVRY------TVPVLAD 108 + Y+ ++ ++ GYN++ I+YG E DV V Sbjct: 53 GTVNYDWGRFSSSNDGRDAKGFGGGVYGGYNMQSGQIVYGAEADVNMGDEKGSAGTVAGR 112 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 + G+ GSLR R GY++ + LLY T G V+ + + A+G T G GVE Sbjct: 113 AVEGKQGVNGSLRGRVGYDM-NPFLLYGTAGLAVSDNKVRDGVNKDSATALGYTVGAGVE 171 Query: 169 VGGLSESLVARLEYRASKYSKVEGF-----------YNTISLGVGMKF 205 +++++ ARLEYR S Y K + +++ G+G+KF Sbjct: 172 A-MVTDNITARLEYRYSDYQKKDYTLGNDAFSRGFDDHSVKAGIGVKF 218 >gi|146427766|emb|CAM89966.2| 25 kDa outer membrane protein [Brucella canis] gi|146427776|emb|CAM89957.2| 25 kDa outer membrane protein [Brucella canis] gi|146427786|emb|CAM89948.2| 25 kDa outer membrane protein [Brucella canis] Length = 163 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 22/173 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49 Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 +A + GSI FAG+N + I+YGVEGD Y+ + D G Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGPEVKQGF 109 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161 >gi|146427736|emb|CAM89993.2| 25 kDa outer membrane protein [Brucella neotomae] gi|146427746|emb|CAM89984.2| 25 kDa outer membrane protein [Brucella neotomae] gi|146427756|emb|CAM89975.2| 25 kDa outer membrane protein [Brucella neotomae] Length = 163 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 V VS+ L +A AAD ++ P + V ++ + G Y GL Y G Sbjct: 1 LVIVSAALLPFSATAFAADAIQEQ--------PPVPAPVEVAPQYSWAGGYTGL---YLG 49 Query: 67 SFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 +A + GSI FAG+N + I+YGVEGD Y+ + D + G Sbjct: 50 YGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGF 109 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 110 EGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 161 >gi|110634323|ref|YP_674531.1| OmpA-like transmembrane region [Mesorhizobium sp. BNC1] gi|110285307|gb|ABG63366.1| OmpA-like transmembrane region [Chelativorans sp. BNC1] Length = 216 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 93/201 (46%), Gaps = 22/201 (10%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY--------NGSFGEE 71 A AAD + V + GPYAG++ Y +G+ GE Sbjct: 23 PAYAADVIMEQPPAPPAA------PMEVAPVATWAGPYAGIALGYGFSGEVSADGAPGEV 76 Query: 72 AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIGGSLRIRGGYEVSD 130 G++F G+ + +YGVEGD+ Y + HG+ GSLR R GY +D Sbjct: 77 ETDGFVGNVFGGWQGQSGQFVYGVEGDIGYNGMEGSEGGVDVEHGVDGSLRARLGYAATD 136 Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-- 188 ++LLYAT G ++ +G + A+G TAG GV+V L+ ARLEYR + S Sbjct: 137 NVLLYATGGGAASRLEASGGGLTESETAVGWTAGAGVDV-KLTPKSFARLEYRYTDLSAE 195 Query: 189 ----KVEGFYNTISLGVGMKF 205 V+ N + LGVGM+F Sbjct: 196 FDSVDVDTTSNKVMLGVGMQF 216 >gi|325292505|ref|YP_004278369.1| outer membrane protein [Agrobacterium sp. H13-3] gi|325060358|gb|ADY64049.1| outer membrane protein [Agrobacterium sp. H13-3] Length = 218 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 31/227 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + S++A A F +A AAD V +A ++ P++ ++ G Y G Sbjct: 1 MRIFVATIMASTIAAAGFSAAHAADAVNDVPQA------PVAYDQPAPVK-NWTGAYLGG 53 Query: 61 SALYNGSFGEEAHHNAGG-----SIFAGYNVEDSCIMYGVEGDVRY------TVPVLADN 109 +A Y+ ++ I+ GYN+++ I+YG E DV V + Sbjct: 54 TANYDWGRFSSSNDGRDAKGAGGGIYGGYNMQNGQIVYGAEADVNLGRERGSAGTVGGNA 113 Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 + G+ GSLR R GY++ + LLY T G + + + A+G T G GVE Sbjct: 114 VEGKQGVNGSLRARVGYDM-NPFLLYGTAGLAASDNKVRDATSKDSATALGYTVGAGVEA 172 Query: 170 GGLSESLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 +++++ ARLEYR S Y K + +++ G+G+KF Sbjct: 173 -MVTDNITARLEYRYSDYQKKDYSLDSGAFSRGFDDHSVKAGIGVKF 218 >gi|307944219|ref|ZP_07659560.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4] gi|307772565|gb|EFO31785.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4] Length = 242 Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 35/232 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L A +++++A + AAD + A P R D++G YAG Sbjct: 19 MKRLACAAIAATVSVAGLAPSYAADLPQAAPTYDTTYEPAP------SGRFDWSGAYAGG 72 Query: 61 SALYNGSFGEEAH----------HNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLAD- 108 S + S + + G + GYN I+ GVE D + T Sbjct: 73 SLGWVWSGFDTTSSPTGSFDHDTNGFSGGVHGGYNFAITPNIVAGVELDFQMTDLYENTV 132 Query: 109 ----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 N+ + S R R GY + D L+Y T G +A A+G TAG Sbjct: 133 RNGVNVKTSSAWNSSARARLGYAM-DRFLVYGTAGLAIADLSINANGASEDTTALGWTAG 191 Query: 165 VGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205 GVE G +S +L AR+EY + + + +T+ G+ KF Sbjct: 192 AGVE-GAISNNLTARVEYLYQDFGRESFTLGGSKYRADLDTSTVRFGLSYKF 242 >gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506] gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506] Length = 228 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 26/217 (11%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE- 71 LA + AA P + P P ++GPYAG YN S + Sbjct: 14 LATIALALPLAAMPAHAQDNASETAFPDSRIPESAPPVAIWSGPYAGTFVGYNVSRFDNL 73 Query: 72 -----AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGS 119 + G +AG+N++D ++YGVEGDV + ++ + GS Sbjct: 74 RGASISGDGVAGGAYAGFNLQDGSLVYGVEGDVGGAGFDATRRNALGNLDLSGESNVFGS 133 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 LR R G +V D L+Y T G +A+ + + ++G T G GVE +++S+ R Sbjct: 134 LRGRVGVDV-DPFLVYGTGGLAIAETELSLGGVSDSEASVGYTIGAGVEAQ-VTDSIRTR 191 Query: 180 LEYRASKYSKVEG-----------FYNTISLGVGMKF 205 LEYR S + + +++ GV + F Sbjct: 192 LEYRYSDFGSSDYDLGRTSVSSGFDEHSVRAGVSLNF 228 >gi|163759157|ref|ZP_02166243.1| outer membrane protein [Hoeflea phototrophica DFL-43] gi|162283561|gb|EDQ33846.1| outer membrane protein [Hoeflea phototrophica DFL-43] Length = 212 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 25/221 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ LA+ ++L++ AAD + P +P + G Y G Sbjct: 1 MRIRKLALLAAALSVPLATPVLAADAILEQP-------PVPPVAETLPQSFIWTGGYVGG 53 Query: 61 SALYNGSFGEE----AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHG 115 Y + GG ++ GYN + I+YGVEGD+ Y+ + + G Sbjct: 54 YGEYKWGEFDALAGDDADGFGGGVYGGYNWQSDNIVYGVEGDLGYSGADASLGGVTGEQG 113 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 GSLR R GY++ + LLYAT G + T AG T +G TAG G E ++E+ Sbjct: 114 FNGSLRARLGYDI-NPFLLYATGGLAATRAEVTSAAGSDTNTHLGWTAGAGAEA-FVTEN 171 Query: 176 LVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 + RLEYR + Y +++ LG+GMKF Sbjct: 172 ITTRLEYRYTDYGSETYNLGGTNVSSGFDDHSVRLGIGMKF 212 >gi|332717162|ref|YP_004444628.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3] gi|325063847|gb|ADY67537.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3] Length = 223 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 89/226 (39%), Gaps = 32/226 (14%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 + L ++ L ++ AAD V G +P V ++G Y G S Sbjct: 8 RMLKQSLLALGLLGILSDASVAADAV--------GDIPAAPVVNDVAPAFSWDGVYVGAS 59 Query: 62 ALYNGS------FGEEAHHNAGGS---IFAGYNVE-DSCIMYGVEGDVRYTV-PVLADNI 110 A Y + FG H G FAGYN E I+ GVEGD+ Y Sbjct: 60 AGYGWNRVKSTTFGVTTKHEFDGGRFSGFAGYNAEVAPSIILGVEGDLGYAWGDKTIVTS 119 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G+ GS R+R GY + D L+Y G GE + + G T G GV+ Sbjct: 120 EVSAGLNGSARLRAGYAI-DRALIYTAAGYTATDSEVKAPFGEDSKVLHGWTVGAGVDY- 177 Query: 171 GLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 + +L R+EYR + + K + + + +G+G+KF Sbjct: 178 AFTNNLFGRVEYRYNDFGKATYHTGPITSTGDVSEHVVKVGLGVKF 223 >gi|190891678|ref|YP_001978220.1| outer membrane protein [Rhizobium etli CIAT 652] gi|218510868|ref|ZP_03508746.1| outer membrane protein [Rhizobium etli Brasil 5] gi|190696957|gb|ACE91042.1| outer membrane protein [Rhizobium etli CIAT 652] Length = 207 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 83/217 (38%), Gaps = 30/217 (13%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++ +A AAD V+ VPT ++GPY G+ Sbjct: 3 LTIATAFLALVATTAFAADVVQD--------VPTAPVA--AAPVFTWSGPYFGIDGGAGW 52 Query: 67 ------SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGI 116 + G A + G +F AGYN + I+ G+EG++ + Sbjct: 53 LNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNWNEEDALGADVGTDW 112 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSES 175 G++R R GY D L+Y G + Y + T G T G GV+ ++ + Sbjct: 113 AGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNN 170 Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 + AR EYR + Y V+ + + G+G+KF Sbjct: 171 IFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207 >gi|150396648|ref|YP_001327115.1| porin [Sinorhizobium medicae WSM419] gi|150028163|gb|ABR60280.1| porin [Sinorhizobium medicae WSM419] Length = 215 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 20/220 (9%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M + L ++ L A AAD V T+ + + G L Sbjct: 1 MIRNVLVAIFAAFMLGG--KAHAADL--AQPPEPTPTVETVHSFVWTGGYLGLQGGGGWL 56 Query: 61 SALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV-----PVLADNIHSL 113 ++ + G + +GG FAGYN + + GVEGDV Y V N Sbjct: 57 NSDLSVPGGGGSKRFSGGLLGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGTNTDVG 116 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGL 172 + GS+R R GY V+D LLYAT G V + + + A + G T G GV+ G Sbjct: 117 TDVSGSVRARLGYTVNDRTLLYATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GF 175 Query: 173 SESLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 ++S+ R EYR + +S V+ + ++GVG+KF Sbjct: 176 TDSVFGRAEYRYNDFSDKDVGGVDVDLDQHQFTIGVGVKF 215 >gi|218513075|ref|ZP_03509915.1| outer membrane protein [Rhizobium etli 8C-3] Length = 134 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 14/136 (10%) Query: 82 AGYNVEDSCIMYGVEGDVRYTVP-VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 GYN + I+YGVE D+ Y+ V + + + +G GS+R R GY++ + LLY T G Sbjct: 1 TGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDM-NPFLLYGTAGL 59 Query: 141 DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------- 191 + + + + A G T G GVE ++ ++ RLEYR + Y + Sbjct: 60 ALGNIKVSDGTSDESKTAYGYTVGAGVEA-FVTNNITTRLEYRYTDYQSKDYDLDSGSFS 118 Query: 192 --GFYNTISLGVGMKF 205 N++ LG+G+KF Sbjct: 119 RGYDENSVKLGIGVKF 134 >gi|218461202|ref|ZP_03501293.1| outer membrane protein [Rhizobium etli Kim 5] gi|218658675|ref|ZP_03514605.1| outer membrane protein [Rhizobium etli IE4771] Length = 207 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 80/217 (36%), Gaps = 30/217 (13%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++ +A AAD V+ A ++GPY G+ Sbjct: 3 LTIATTFLALVATTAFAADVVQEAPTAPLAAA----------PVFTWSGPYFGIDGGAAW 52 Query: 67 ------SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGI 116 + G A + G +F AGYN + + G+EG++ + Sbjct: 53 LNGDFSAGGASASEDFNGGVFGGFAGYNFQFDNFVVGIEGNLEHNWNEEDALGAEVGTDW 112 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSES 175 G++R R GY D L+Y G + Y + T G T G GV+ ++ + Sbjct: 113 AGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNN 170 Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 + AR EYR + Y V+ + + G+G+KF Sbjct: 171 IFARGEYRYNDYGEQDILGVDVDLDQHELKFGIGVKF 207 >gi|86358535|ref|YP_470427.1| outer membrane protein [Rhizobium etli CFN 42] gi|86282637|gb|ABC91700.1| outer membrane protein [Rhizobium etli CFN 42] Length = 208 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 31/218 (14%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++ SA AAD V+ ++GPY G+ + Sbjct: 3 LTIATTFLALVATSAFAADAVQDVPAAPVAAA----------PAFTWSGPYLGIDGGASW 52 Query: 67 SFGE-------EAHHNAGG--SIFAGYNVE-DSCIMYGVEGDVRYTVPVLAD-NIHSLHG 115 G+ ++ GG FAGYN + D+ I+ G+EG++ Y Sbjct: 53 LNGDFSAGGASDSQDFNGGVFGAFAGYNFQFDNNIVVGIEGNLEYNWNEEEALGADVGTD 112 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSE 174 G++R R GY D LLY G + Y + + T G T G GV+ ++ Sbjct: 113 WAGAVRGRVGYAF-DRALLYGAAGWTATRGYVDLPGSDKETETFNGYTVGAGVDF-AITN 170 Query: 175 SLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 ++ AR EYR + + V+ + + G+G+KF Sbjct: 171 NIFARGEYRYNDFGEKDILGVDVDLNQHELKFGIGVKF 208 >gi|218461155|ref|ZP_03501246.1| outer membrane protein [Rhizobium etli Kim 5] Length = 168 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 10/167 (5%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S+ A+A +AQAAD V + +A + V ++ G Y G Sbjct: 1 MRVLIAGLMASAFAIAGVSAAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQAGQIVYGVESDLGYSGDDVSSGGVENKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 GS+R R GY++ + LLY T G + + + + A G T G Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVSDDTSDESKTAYGYTVG 160 >gi|327189607|gb|EGE56759.1| outer membrane protein [Rhizobium etli CNPAF512] Length = 207 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 30/217 (13%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++ +A AAD V+ A ++GPY G+ Sbjct: 3 LTIATAFLALVATTAFAADVVQEAPTAPVAAA----------PVFTWSGPYFGIDGGAGW 52 Query: 67 ------SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGI 116 + G A + G +F AGYN + I+ G+EG++ + Sbjct: 53 LNGDFSAGGASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIEHNWNEEDALGADVGTDW 112 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSES 175 G++R R GY D L+Y G + Y + T G T G GV+ ++ + Sbjct: 113 AGAVRGRVGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNN 170 Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 + AR EYR + Y V+ + + G+G+KF Sbjct: 171 IFARGEYRYNDYGEKDILGVDVDLDQHELKFGIGVKF 207 >gi|307320995|ref|ZP_07600402.1| porin [Sinorhizobium meliloti AK83] gi|306893369|gb|EFN24148.1| porin [Sinorhizobium meliloti AK83] Length = 213 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%) Query: 68 FGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV---PVLADNIHSLHGIGGSLRI 122 G + +GG FAGYN + + GVEGDV Y V + + + GS+R Sbjct: 64 GGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVFGSDTEAGTDVSGSVRA 123 Query: 123 RGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 R GY V+D L+YAT G V + + + A + G T G GV+ G ++S+ R E Sbjct: 124 RLGYTVNDRTLIYATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGRAE 182 Query: 182 YRASKYS-------KVEGFYNTISLGVGMKF 205 YR + + V+ + ++GVG+KF Sbjct: 183 YRYNDFGDKDVGGVNVDLDQHQFTVGVGVKF 213 >gi|227821981|ref|YP_002825952.1| outer membrane protein [Sinorhizobium fredii NGR234] gi|227340981|gb|ACP25199.1| outer membrane protein [Sinorhizobium fredii NGR234] Length = 216 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 25/219 (11%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-- 66 + ++ +A F ++ AA P A + G Y GL Sbjct: 1 MIRNVLVAMFGASLAAGPTYAADITEAPE--PAPAILETTPTFVWTGGYVGLQGGGGWLN 58 Query: 67 ----SFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTV-----PVLADNIHSLH 114 G A + G +F AGYN + + GVEGDV Y V + Sbjct: 59 SDLSVPGASASEDFSGGLFGAFAGYNYQMGDWVVGVEGDVSYNWNDKSFTVFGASTEVGT 118 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLS 173 + GS+R R GY +++ LLY T G V + + + A + G T G G++ + Sbjct: 119 DVSGSVRGRVGYTLNEKALLYGTGGWAVTRGFVDVAGAPKEKETFNGWTIGGGIDY-AFT 177 Query: 174 ESLVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 S+ R EYR + + V+ + ++GVG+KF Sbjct: 178 NSMFGRAEYRYNDFGDKDVGGVDVDLDQHQFTVGVGVKF 216 >gi|239830970|ref|ZP_04679299.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301] gi|239823237|gb|EEQ94805.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301] Length = 240 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 88/240 (36%), Gaps = 49/240 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 KL + S++AL + A+AAD V V + G Y G Sbjct: 13 KLKALLLASTVALVAATGAKAADAVIEQE----------PAPVVVAPSFTWTGAYIGGQI 62 Query: 63 LYNG----------SFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI- 110 Y S+G+ G ++AGYN + I+ G++GDV Y ++ Sbjct: 63 GYGWGKSNFDGDVFSYGDVKPDGFLGGVYAGYNFDLGNNIVLGIDGDVTYNDVSKDIDVF 122 Query: 111 ---------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITP 156 + G++R R GY V D + Y G +G + Sbjct: 123 DGDLAVGDFETKLRWSGAVRARVGYAV-DRFMPYLAGGVAFGNIKNSGSIDGIGSFSESK 181 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205 G TAG GV+ +++L+ RLEYR + Y + + N + LGV KF Sbjct: 182 TLTGWTAGAGVDYAA-TDNLIVRLEYRYTDYGDKDIDFGGLNINQDFKTNEVRLGVAYKF 240 >gi|15965438|ref|NP_385791.1| outer-membrane protein [Sinorhizobium meliloti 1021] gi|307310613|ref|ZP_07590260.1| porin [Sinorhizobium meliloti BL225C] gi|15074619|emb|CAC46264.1| Probable outer-membrane protein [Sinorhizobium meliloti 1021] gi|306899723|gb|EFN30349.1| porin [Sinorhizobium meliloti BL225C] Length = 215 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 16/153 (10%) Query: 68 FGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV-----PVLADNIHSLHGIGGSL 120 G + +GG FAGYN + + GVEGDV Y V + + + GS+ Sbjct: 64 GGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGSDTEAGTDVSGSV 123 Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 R R GY V+D L+YAT G V + + + A + G T G GV+ G ++S+ R Sbjct: 124 RARLGYTVNDRTLIYATGGWAVTRGFVDVAGAPKEKETFNGWTIGGGVDY-GFTDSVFGR 182 Query: 180 LEYRASKYS-------KVEGFYNTISLGVGMKF 205 EYR + + V+ + ++GVG+KF Sbjct: 183 AEYRYNDFGDKDVGGVNVDLDQHQFTVGVGVKF 215 >gi|222087507|ref|YP_002546044.1| outer membrane protein [Agrobacterium radiobacter K84] gi|221724955|gb|ACM28111.1| outer membrane protein [Agrobacterium radiobacter K84] Length = 204 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 32/217 (14%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63 + + +L + SA AAD ++GPY G+ Sbjct: 1 MLIPALLALASTSAVAADLTEE-----------PVAAAAPASVFTWSGPYLGVHGGGAIT 49 Query: 64 ---YNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTVPVLA--DNIHSLHGI 116 + G+++ GG + F GYN + ++ GV+G++ Y A + Sbjct: 50 KGNFKFGSGDQSEDFKGGFLGNFFGYNYQFDKVVVGVDGNIDYNWNNKAVANASSVGTDW 109 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAGEITPIAIGGTAGVGVEVGGLSES 175 G++R R GY D+LL+Y G A+ + + +G+ + G TAG GV+ + + Sbjct: 110 SGAVRGRVGYAF-DNLLIYGAAGWTAARGFADVSGSGDGKVVFSGWTAGTGVDY-AFTNN 167 Query: 176 LVARLEYRASKYS-------KVEGFYNTISLGVGMKF 205 + AR EYR S + K + +I+LGVG+KF Sbjct: 168 IFARAEYRYSDFGSKELQGVKSDLTEQSINLGVGLKF 204 >gi|241518381|ref|YP_002979009.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862794|gb|ACS60458.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 207 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 30/206 (14%) Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG------SFGEE 71 +A AAD V ++GPY G+ + G Sbjct: 14 STTALAADAVPVI----------SDAPVAAAPAFTWSGPYLGIDGGAGWLNGDFSAGGAS 63 Query: 72 AHHNAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIRGGYE 127 A + G IF G YN + I+ G+EG++ + G++R R GY Sbjct: 64 ASEDFNGGIFGGFVGYNFQFDNIVVGIEGNLEHNWNEEEALGADVGTDWTGAVRGRVGYA 123 Query: 128 VSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 D L+Y G + Y + T G T G G++ ++ ++ AR EYR + Sbjct: 124 F-DKALIYGAAGWTATRGYVDLPGLDKETETFNGYTVGAGLDF-AITNNIFARGEYRYND 181 Query: 187 YS-------KVEGFYNTISLGVGMKF 205 + V+ + + G+G+KF Sbjct: 182 FGEKDVLGVDVDLDQHELKFGIGVKF 207 >gi|218508536|ref|ZP_03506414.1| outer membrane protein [Rhizobium etli Brasil 5] Length = 144 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S+ A+A AQAAD V + +A + V ++ G Y G Sbjct: 1 MRVLIAGLMASAFAIAGVSVAQAADAVDQVPEA------PVAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-PVLADNIHSLHGIG 117 + YN G FG + H + GG +F GYN + I+YGVE D+ Y+ V + + + +G Sbjct: 55 AGTYNMGDFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWN 114 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 GS+R R GY++ + LLY T G + + Sbjct: 115 GSVRGRVGYDM-NPFLLYGTAGLALGNIKVS 144 >gi|153007478|ref|YP_001368693.1| porin [Ochrobactrum anthropi ATCC 49188] gi|151559366|gb|ABS12864.1| porin [Ochrobactrum anthropi ATCC 49188] Length = 229 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 88/240 (36%), Gaps = 49/240 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 KL + S++AL + A+AAD V V ++G Y G Sbjct: 2 KLKALLLASTVALVAATGAKAADAVIEQE----------PVPVVVAPTFTWSGAYIGGQI 51 Query: 63 LYNG----------SFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIH 111 Y SFG G I+AGYN + I+ G++GDV Y +++ Sbjct: 52 GYGWGKSDFSGDVYSFGNVKPDGFLGGIYAGYNFDLGNSIVLGIDGDVTYNDVSKDIDVY 111 Query: 112 S----------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITP 156 S G++R R GY V D + Y G +G + Sbjct: 112 SGDLAVGDFETKLRWSGAVRARVGYAV-DRFMPYLAGGVAFGNIKNSGSIDGIGSFSESK 170 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 G TAG GV+ +++L+ RLEYR + Y + N + LGV KF Sbjct: 171 TLTGWTAGAGVDYAA-TDNLIVRLEYRYTDYGDKDIEFGGLNVNQDFKTNEVRLGVAYKF 229 >gi|222149200|ref|YP_002550157.1| outer membrane protein [Agrobacterium vitis S4] gi|221736185|gb|ACM37148.1| outer membrane protein [Agrobacterium vitis S4] Length = 212 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 76/203 (37%), Gaps = 28/203 (13%) Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGP---------YAGLSALYNGSFGEE 71 A AAD V + VPT P + G + + G+ + Sbjct: 20 AMAADAVDQ--------VPTAPAAVETPAAFSWAGGYIGVYGGYGWLDATLSQGGASLSD 71 Query: 72 AHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVS 129 F G+N + ++ GVE DV Y + + GS R R GY + Sbjct: 72 NFDGGRIGGFGGWNFDVGHNVILGVEADVNYDWNENNYSGVKVGMDVSGSARARAGYAI- 130 Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 D L++ G + Y +G+ G T G GV+ ++ + RLEYR + Y Sbjct: 131 DRALIFVAGGWTADRTYIKSSSGDFNKTLNGWTIGAGVDY-AITNRIFTRLEYRYNDYGT 189 Query: 190 V-------EGFYNTISLGVGMKF 205 + N ++LG+G+KF Sbjct: 190 KNISGIDFDSKQNVVNLGIGIKF 212 >gi|222102056|ref|YP_002546646.1| hypothetical protein Arad_12130 [Agrobacterium radiobacter K84] gi|221728173|gb|ACM31182.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 205 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 18/180 (10%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNG----SFGEEAHHNAG-GSIFAGYNVEDSCIMYG 94 + ++++G Y G Y+ G + N G GYN + I+YG Sbjct: 30 APQPEQQAYSAYNWSGFYLGAQGGYSWNKAKYLGADQSLNTGSAGAHVGYNFQTGNIIYG 89 Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154 +E D Y + S R R GY + +LL K + G+ Sbjct: 90 IENDFNYNFDK---GNKADLQWDASGRARVGYALDRTLLFATAGLAAAGGKVDAPAIGKK 146 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------GFYNTISLGVGMKF 205 I IG TAG GVE L+++++ R EYR S + K + I LG KF Sbjct: 147 DDILIGWTAGAGVE-RALTDNILIRGEYRYSDFGKKDFGSDIGDFSATQQKIILGASYKF 205 >gi|306844393|ref|ZP_07476983.1| outer membrane protein [Brucella sp. BO1] gi|306275206|gb|EFM56956.1| outer membrane protein [Brucella sp. BO1] Length = 227 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 84/238 (35%), Gaps = 47/238 (19%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 KL + S++ L + A AAD V V +NG Y G Sbjct: 2 KLKALLFASTVVLVATTGANAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 51 Query: 63 LYNGSFGEEAHHNAG----------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA---- 107 Y ++ + G G ++AGYN + ++ G++GDV Y Sbjct: 52 GYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFL 111 Query: 108 -----DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPIA 158 + + G++R R GY V D L Y G + + + Sbjct: 112 DGNDAGSFENRLRWSGAVRARAGYAV-DRFLPYIAGGVAFGSLRNRGEFEDASFSQSKTL 170 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205 G T G G++ +++++ RLEYR + Y + + N I GV KF Sbjct: 171 TGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDDAAVTNNFKTNDIRFGVAYKF 227 >gi|307315839|ref|ZP_07595348.1| porin [Sinorhizobium meliloti BL225C] gi|306898513|gb|EFN29191.1| porin [Sinorhizobium meliloti BL225C] Length = 208 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 80/213 (37%), Gaps = 31/213 (14%) Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71 S L A AAD + P ++G Y G+ + GE Sbjct: 8 SFILFGSSGAMAADVTFDNS--------ALPPVSEAP--FSWSGAYIGVQGGGGWASGEF 57 Query: 72 AHHNAGG---------SIFAGYNVE-DSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSL 120 + G F GYN + D+ ++ G+EGDV + GS+ Sbjct: 58 SGFGINGSEDANGGSLGGFVGYNYQFDNNLVLGIEGDVEHDWNEQQVFGADFGTDWAGSV 117 Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 R R GY D+ L+YAT G + Y G+ G T G G++ + + R Sbjct: 118 RGRLGYAF-DNALIYATAGWAATRGYVEVPGLGKDEKTFNGYTVGAGLDY-AFTNQVFGR 175 Query: 180 LEYRASKYS-------KVEGFYNTISLGVGMKF 205 +EYR + Y V+ + + +G+G+KF Sbjct: 176 VEYRYNDYGDQDLQGINVDVDQHAVKVGLGIKF 208 >gi|153011627|ref|YP_001372841.1| porin [Ochrobactrum anthropi ATCC 49188] gi|151563515|gb|ABS17012.1| porin [Ochrobactrum anthropi ATCC 49188] Length = 228 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 84/239 (35%), Gaps = 48/239 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 K+ + S++AL + A+AAD + P + G Y G Sbjct: 2 KIKSLLLASTVALIATTGAKAADAIVEEPAPVIVAEP----------IFSWTGAYIGGQI 51 Query: 63 LYNGSFGEEAH------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-------- 107 Y E G ++AGYN + + GV+GD+ Y Sbjct: 52 GYGWGKSEFEDAFRVKPDGFLGGLYAGYNFDVGNNFILGVDGDITYNNLKDNYSATDGDI 111 Query: 108 -DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE--------ITPIA 158 ++ S G++R R G D + Y G T A + + Sbjct: 112 AGDLESKLRWSGAVRARAGVAF-DRFMPYIAGGVAFGSVKNTLSATDGVDEISVSQSKTY 170 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205 G TAG GV+ +++L+ RLEYR + Y K + + + + LGV KF Sbjct: 171 TGWTAGAGVDYAA-TDNLILRLEYRYTDYGKKDFDFGTDVSVEDKFKTHDVRLGVAYKF 228 >gi|256060263|ref|ZP_05450438.1| outer membrane protein [Brucella neotomae 5K33] gi|261324236|ref|ZP_05963433.1| Omp25c [Brucella neotomae 5K33] gi|46251235|gb|AAS84588.1| Omp25c [Brucella neotomae] gi|261300216|gb|EEY03713.1| Omp25c [Brucella neotomae 5K33] Length = 228 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 83/239 (34%), Gaps = 48/239 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 KL + S++ L + AAD V V +NG Y G Sbjct: 2 KLKALLFASTVVLVAATGTNAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 51 Query: 63 LYNGSFGEEAHHNAG----------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADN-- 109 Y ++ + G G ++AGYN + ++ G++GDV Y + Sbjct: 52 GYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFL 111 Query: 110 --------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPI 157 + G++R R GY V D L Y G + G + Sbjct: 112 DENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGVAFGSLRNRGEFEGTGFSQSKT 170 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-----------NTISLGVGMKF 205 G T G G++ +++++ RLEYR + Y + + N I GV KF Sbjct: 171 LTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDDAAVTNNFKTNDIRFGVAYKF 228 >gi|256060262|ref|ZP_05450437.1| outer membrane protein, putative [Brucella neotomae 5K33] gi|261324235|ref|ZP_05963432.1| Omp25d [Brucella neotomae 5K33] gi|46251251|gb|AAS84596.1| Omp25d [Brucella neotomae] gi|261300215|gb|EEY03712.1| Omp25d [Brucella neotomae 5K33] Length = 230 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 83/241 (34%), Gaps = 50/241 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51 Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110 Y NGS E + G ++ GYN + + G++ +V Y + + Sbjct: 52 GYGWGRAKLENRTNGSTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111 Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155 + G++R R GY + D + Y G + G+ + Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204 G T G G++ +++++ RLEYR + Y K N I LGV K Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229 Query: 205 F 205 F Sbjct: 230 F 230 >gi|225851658|ref|YP_002731891.1| porin [Brucella melitensis ATCC 23457] gi|256264831|ref|ZP_05467363.1| Omp25d [Brucella melitensis bv. 2 str. 63/9] gi|225640023|gb|ACN99936.1| porin [Brucella melitensis ATCC 23457] gi|263095287|gb|EEZ18914.1| Omp25d [Brucella melitensis bv. 2 str. 63/9] gi|326408138|gb|ADZ65203.1| porin [Brucella melitensis M28] gi|326537849|gb|ADZ86064.1| porin [Brucella melitensis M5-90] Length = 230 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51 Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI 110 Y NG E + G ++ GYN + + G++ +V Y + + Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNHFILGLDANVDYNNLKKSRDF 111 Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155 + G++R R GY + D + Y G + G+ + Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204 G T G G++ +++++ RLEYR + Y K N I LGV K Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229 Query: 205 F 205 F Sbjct: 230 F 230 >gi|17988113|ref|NP_540747.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|23501032|ref|NP_697159.1| outer membrane protein [Brucella suis 1330] gi|62289099|ref|YP_220892.1| hypothetical protein BruAb1_0115 [Brucella abortus bv. 1 str. 9-941] gi|82699037|ref|YP_413611.1| outer membrane protein [Brucella melitensis biovar Abortus 2308] gi|148559864|ref|YP_001258156.1| putative outer membrane protein [Brucella ovis ATCC 25840] gi|161618106|ref|YP_001591993.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365] gi|163842393|ref|YP_001626797.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|189023374|ref|YP_001934142.1| outer membrane protein [Brucella abortus S19] gi|225626661|ref|ZP_03784700.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|237814591|ref|ZP_04593589.1| Porin subfamily protein [Brucella abortus str. 2308 A] gi|254690428|ref|ZP_05153682.1| outer membrane protein, putative [Brucella abortus bv. 6 str. 870] gi|254694916|ref|ZP_05156744.1| outer membrane protein, putative [Brucella abortus bv. 3 str. Tulya] gi|254707184|ref|ZP_05169012.1| outer membrane protein, putative [Brucella pinnipedialis M163/99/10] gi|254709271|ref|ZP_05171082.1| outer membrane protein, putative [Brucella pinnipedialis B2/94] gi|254713306|ref|ZP_05175117.1| outer membrane protein, putative [Brucella ceti M644/93/1] gi|254716340|ref|ZP_05178151.1| outer membrane protein, putative [Brucella ceti M13/05/1] gi|254731459|ref|ZP_05190037.1| outer membrane protein, putative [Brucella abortus bv. 4 str. 292] gi|256030794|ref|ZP_05444408.1| outer membrane protein, putative [Brucella pinnipedialis M292/94/1] gi|256045910|ref|ZP_05448784.1| outer membrane protein, putative [Brucella melitensis bv. 1 str. Rev.1] gi|256112624|ref|ZP_05453545.1| outer membrane protein, putative [Brucella melitensis bv. 3 str. Ether] gi|256158815|ref|ZP_05456676.1| outer membrane protein, putative [Brucella ceti M490/95/1] gi|256254200|ref|ZP_05459736.1| outer membrane protein, putative [Brucella ceti B1/94] gi|256258680|ref|ZP_05464216.1| outer membrane protein, putative [Brucella abortus bv. 9 str. C68] gi|256368582|ref|YP_003106088.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella microti CCM 4915] gi|260169698|ref|ZP_05756509.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella sp. F5/99] gi|260546396|ref|ZP_05822136.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260563195|ref|ZP_05833681.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260567238|ref|ZP_05837708.1| Omp25d [Brucella suis bv. 4 str. 40] gi|260755975|ref|ZP_05868323.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260759199|ref|ZP_05871547.1| outer membrane protein [Brucella abortus bv. 4 str. 292] gi|260884996|ref|ZP_05896610.1| Omp25d [Brucella abortus bv. 9 str. C68] gi|261215250|ref|ZP_05929531.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|261218121|ref|ZP_05932402.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261221348|ref|ZP_05935629.1| Omp25d [Brucella ceti B1/94] gi|261314665|ref|ZP_05953862.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261316777|ref|ZP_05955974.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261321032|ref|ZP_05960229.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261759234|ref|ZP_06002943.1| outer membrane protein [Brucella sp. F5/99] gi|265987848|ref|ZP_06100405.1| Omp25d [Brucella pinnipedialis M292/94/1] gi|265992322|ref|ZP_06104879.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1] gi|265994064|ref|ZP_06106621.1| Omp25d [Brucella melitensis bv. 3 str. Ether] gi|265997308|ref|ZP_06109865.1| Omp25d [Brucella ceti M490/95/1] gi|297247515|ref|ZP_06931233.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5 str. B3196] gi|17983867|gb|AAL53011.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|23346896|gb|AAN29074.1| outer membrane protein, putative [Brucella suis 1330] gi|46251245|gb|AAS84593.1| Omp25d [Brucella abortus] gi|46251247|gb|AAS84594.1| Omp25d [Brucella ovis] gi|46251249|gb|AAS84595.1| Omp25d [Brucella canis] gi|46251253|gb|AAS84597.1| Omp25d [Brucella ceti] gi|46251255|gb|AAS84598.1| Omp25d [Brucella ceti] gi|46251257|gb|AAS84599.1| Omp25d [Brucella ceti] gi|46251259|gb|AAS84600.1| Omp25d [Brucella pinnipedialis] gi|62195231|gb|AAX73531.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615138|emb|CAJ10071.1| outer membrane protein, putative [Brucella melitensis biovar Abortus 2308] gi|148371121|gb|ABQ61100.1| putative outer membrane protein [Brucella ovis ATCC 25840] gi|161334917|gb|ABX61222.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365] gi|163673116|gb|ABY37227.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|189018946|gb|ACD71668.1| outer membrane protein, putative [Brucella abortus S19] gi|225618318|gb|EEH15361.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|237789428|gb|EEP63638.1| Porin subfamily protein [Brucella abortus str. 2308 A] gi|255998740|gb|ACU47139.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella microti CCM 4915] gi|260096503|gb|EEW80379.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260153211|gb|EEW88303.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260156756|gb|EEW91836.1| Omp25d [Brucella suis bv. 4 str. 40] gi|260669517|gb|EEX56457.1| outer membrane protein [Brucella abortus bv. 4 str. 292] gi|260676083|gb|EEX62904.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260874524|gb|EEX81593.1| Omp25d [Brucella abortus bv. 9 str. C68] gi|260916857|gb|EEX83718.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|260919932|gb|EEX86585.1| Omp25d [Brucella ceti B1/94] gi|260923210|gb|EEX89778.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261293722|gb|EEX97218.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261296000|gb|EEX99496.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261303691|gb|EEY07188.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261739218|gb|EEY27214.1| outer membrane protein [Brucella sp. F5/99] gi|262551776|gb|EEZ07766.1| Omp25d [Brucella ceti M490/95/1] gi|262765045|gb|EEZ10966.1| Omp25d [Brucella melitensis bv. 3 str. Ether] gi|263003388|gb|EEZ15681.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1] gi|264660045|gb|EEZ30306.1| Omp25d [Brucella pinnipedialis M292/94/1] gi|297174684|gb|EFH34031.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5 str. B3196] Length = 230 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51 Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110 Y NG E + G ++ GYN + + G++ +V Y + + Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111 Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155 + G++R R GY + D + Y G + G+ + Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204 G T G G++ +++++ RLEYR + Y K N I LGV K Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229 Query: 205 F 205 F Sbjct: 230 F 230 >gi|254700931|ref|ZP_05162759.1| outer membrane protein, putative [Brucella suis bv. 5 str. 513] gi|261751446|ref|ZP_05995155.1| outer membrane protein [Brucella suis bv. 5 str. 513] gi|261741199|gb|EEY29125.1| outer membrane protein [Brucella suis bv. 5 str. 513] Length = 232 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 82/243 (33%), Gaps = 52/243 (21%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51 Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110 Y NG E + G ++ GYN + + G++ +V Y + + Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111 Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------E 153 + G++R R GY + D + Y G + + G Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGIAFGGIKNSLRIGGEESSKS 170 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVG 202 + G T G G++ +++++ RLEYR + Y K N I LGV Sbjct: 171 KSKTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVA 229 Query: 203 MKF 205 KF Sbjct: 230 YKF 232 >gi|90419513|ref|ZP_01227423.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans SI85-9A1] gi|90336450|gb|EAS50191.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans SI85-9A1] Length = 223 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 31/205 (15%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH------HNAGG 78 D + P A + ++G YAG YN S +++ G Sbjct: 26 DVIYEEPQ-----PPVAAPIAPSTPVYVWSGAYAGAFVGYNTSNFDQSTGASFDGDGFVG 80 Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131 ++ GYN + ++G+E D+ + + + I GS R R G V D Sbjct: 81 GVYTGYNWQADQFVFGLEADLGGSDVDASGTNAATGAQLDADSNIFGSFRARVGVAV-DP 139 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L++AT G A+ + + +IG T G GVE +S+ + RLEYR S + Sbjct: 140 FLVFATGGLAAARNELSLNGFSDSQTSIGYTLGAGVEAR-VSDDVTTRLEYRYSDFGSET 198 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ +KF Sbjct: 199 YDLGNTSVSSGFDEHSIRAGIALKF 223 >gi|306844392|ref|ZP_07476982.1| outer membrane protein [Brucella sp. BO1] gi|306275205|gb|EFM56955.1| outer membrane protein [Brucella sp. BO1] Length = 230 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPGFSWAGAYFGGQV 51 Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110 Y NG E + G ++ GYN + + G++ +V Y + + Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111 Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155 + G++R R GY + D + Y G + G+ + Sbjct: 112 ITNGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204 G T G G++ +++++ RLEYR + Y K N I LGV K Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229 Query: 205 F 205 F Sbjct: 230 F 230 >gi|254718339|ref|ZP_05180150.1| outer membrane protein, putative [Brucella sp. 83/13] gi|265983298|ref|ZP_06096033.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306839561|ref|ZP_07472367.1| outer membrane protein [Brucella sp. NF 2653] gi|306842593|ref|ZP_07475242.1| outer membrane protein [Brucella sp. BO2] gi|264661890|gb|EEZ32151.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306287238|gb|EFM58726.1| outer membrane protein [Brucella sp. BO2] gi|306405347|gb|EFM61620.1| outer membrane protein [Brucella sp. NF 2653] Length = 230 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 50/241 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPGFSWAGAYFGGQV 51 Query: 63 LY-----------NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNI 110 Y NG E + G ++ GYN + + G++ +V Y + + Sbjct: 52 GYGWGRAKLENRTNGGTSEFKPNGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDF 111 Query: 111 -----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEIT 155 + G++R R GY + D + Y G + G+ + Sbjct: 112 ITSGNPVQTTGETQLRWSGAVRARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKS 170 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMK 204 G T G G++ +++++ RLEYR + Y K N I LGV K Sbjct: 171 KTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYK 229 Query: 205 F 205 F Sbjct: 230 F 230 >gi|315498453|ref|YP_004087257.1| porin [Asticcacaulis excentricus CB 48] gi|315416465|gb|ADU13106.1| porin [Asticcacaulis excentricus CB 48] Length = 199 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 27/179 (15%) Query: 52 DFNGPYAGLSALYN----------GSFGEEAHHNAG---GSIFAGYNVEDSCIMYGVEGD 98 DF+GPY Y G+ E A + G + G+N + + ++GVE D Sbjct: 23 DFSGPYIAGQGGYAKTKLEVTYSAGTTTESASDDTGNGAAGVILGFNAQSNGAVFGVETD 82 Query: 99 VRYT-----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153 + + VL + + + G++R R G+ VS + L Y G + Y + Sbjct: 83 LNWNNAKDRYRVLGEEVETGIDYSGAVRARLGF-VSGNTLFYGAAGVAGTRAYVEYDGEK 141 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-------FYNTISLGVGMKF 205 T G TAG+G + S+ + R+EYR + + VE ++ LG+GMKF Sbjct: 142 ETETVAGWTAGIGAD-HAFSDRVFGRIEYRYTDFGDVEDDGVKAELMQQSVWLGLGMKF 199 >gi|237814592|ref|ZP_04593590.1| Porin subfamily protein [Brucella abortus str. 2308 A] gi|237789429|gb|EEP63639.1| Porin subfamily protein [Brucella abortus str. 2308 A] Length = 239 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V +NG Y G Y ++ + G G ++AGYN + Sbjct: 42 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 101 Query: 91 IMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y + + G++R R GY V D L Y G Sbjct: 102 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 160 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 161 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 219 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 220 AAVTNNFKTNDIRFGVAYKF 239 >gi|294851523|ref|ZP_06792196.1| outer membrane protein [Brucella sp. NVSL 07-0026] gi|294820112|gb|EFG37111.1| outer membrane protein [Brucella sp. NVSL 07-0026] Length = 237 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V +NG Y G Y ++ + G G ++AGYN + Sbjct: 40 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 99 Query: 91 IMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y + + G++R R GY V D L Y G Sbjct: 100 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENHLRWSGAVRARAGYAV-DRFLPYIAGGV 158 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 159 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 217 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 218 AAVTNNFKTNDIRFGVAYKF 237 >gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062] gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062] Length = 221 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 30/228 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M ++ ++ +A ++ AAD + + +D++G Y G Sbjct: 1 MLRIASCTAIAFGLMAG--TSLAADLPQPVQPSQPEISYETPA---TFSAYDWSGAYIGA 55 Query: 61 SALY--------NGSFG--EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTV-PVLAD 108 +A + +G+ G ++ + + AGYN ++ G E D++Y + Sbjct: 56 NAGWGFLSADGKSGASGALDDDQNGVTAGVHAGYNFMVAPSVVLGAEADIQYNDLEEKSA 115 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 + ++R R GY + D L+Y T G AG+ AIG G GVE Sbjct: 116 GVELQSDWNATVRARAGYAL-DRTLVYGTGGAAFKDLTAKSSAGKDEKTAIGYVVGAGVE 174 Query: 169 VGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205 ++++L ARLEY + K + N + GV MKF Sbjct: 175 -HAVTDTLTARLEYLYQDFGDQKFDFGGTTEKTKIDENLVRAGVSMKF 221 >gi|156739552|gb|ABU93436.1| Omp25 [Brucella abortus] Length = 123 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 12/124 (9%) Query: 64 YNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSL 113 Y G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 2 YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVK 61 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E L+ Sbjct: 62 QGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLT 119 Query: 174 ESLV 177 ++++ Sbjct: 120 DNIL 123 >gi|254718340|ref|ZP_05180151.1| outer membrane protein [Brucella sp. 83/13] gi|265983299|ref|ZP_06096034.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306839562|ref|ZP_07472368.1| outer membrane protein [Brucella sp. NF 2653] gi|264661891|gb|EEZ32152.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306405348|gb|EFM61621.1| outer membrane protein [Brucella sp. NF 2653] Length = 227 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 71/199 (35%), Gaps = 37/199 (18%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V +NG Y G Y ++ + G G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90 Query: 91 IMYGVEGDVRYTVPVLA---------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 ++ G++GDV Y + + G++R R GY V D L Y G Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDGNDAGSFENRLRWSGAVRARAGYAV-DRFLPYIAGGVA 149 Query: 142 VA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194 + + + G T G G++ +++++ RLEYR + Y + + Sbjct: 150 FGSLRNRGEFEDASFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDDA 208 Query: 195 --------NTISLGVGMKF 205 N I GV KF Sbjct: 209 AVTNNFKTNDIRFGVAYKF 227 >gi|225626662|ref|ZP_03784701.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|225618319|gb|EEH15362.1| Porin subfamily protein [Brucella ceti str. Cudo] Length = 239 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 72/200 (36%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V + +NG Y G Y ++ + G G ++AGYN + Sbjct: 42 PAPVVVALTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 101 Query: 91 IMYGVEGDVRYTVPVLADNI----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y + + G++R R GY V D L Y G Sbjct: 102 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 160 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 161 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 219 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 220 AAVTNNFKTNDIRFGVAYKF 239 >gi|156739530|gb|ABU93425.1| Omp25 [Brucella suis] gi|156739540|gb|ABU93430.1| Omp25 [Brucella abortus] gi|156739558|gb|ABU93439.1| Omp25 [Brucella melitensis] gi|156739590|gb|ABU93455.1| Omp25 [Brucella suis] gi|156739594|gb|ABU93457.1| Omp25 [Brucella suis] gi|156739614|gb|ABU93467.1| Omp25 [Brucella melitensis] gi|156739630|gb|ABU93475.1| Omp25 [Brucella suis] Length = 128 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%) Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPV 105 G Y GL Y G +A + GSI FAG+N + I+YGVEGD Y+ Sbjct: 1 GGYTGL---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAK 57 Query: 106 LA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 + D + G GSLR R GY++ + ++ Y T G +Q + + +G TAG Sbjct: 58 KSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAG 116 Query: 165 VGVEVGGLSESLV 177 G+E L+++++ Sbjct: 117 AGLEA-KLTDNIL 128 >gi|328542837|ref|YP_004302946.1| OmpA-like transmembrane domain [polymorphum gilvum SL003B-26A1] gi|326412583|gb|ADZ69646.1| OmpA-like transmembrane domain, putative [Polymorphum gilvum SL003B-26A1] Length = 223 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 84/232 (36%), Gaps = 36/232 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L A ++ + A AAD + P I N+ R D++G Y G Sbjct: 1 MKSLAAAGVSIAVLAGASLPAFAADLPQ-------PAQPVIYDNQVSSARFDWSGFYFGG 53 Query: 61 SALYNGS----------FGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTV-----P 104 + + G + AGYN I+ G+E D + + Sbjct: 54 NLGWGWGQFTTNSALTGRFNSDASGVNGGVHAGYNHAITPNIIAGLEADFQLSDLEKRRS 113 Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 V + + ++R R GY D ++Y T G +A + AIG T G Sbjct: 114 VAGVGVKTSSDWNSTIRGRLGYAF-DRFMIYGTGGLAIADLEVAAAGSKGNETAIGWTLG 172 Query: 165 VGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205 G+E G +++++ ARLEY + + + + GV KF Sbjct: 173 AGIE-GAVTDNVTARLEYLYQDFGRESFTLGGTRYRTDLDASIARFGVSYKF 223 >gi|148559219|ref|YP_001258157.1| putative outer membrane protein [Brucella ovis ATCC 25840] gi|46251231|gb|AAS84586.1| Omp25c [Brucella ovis] gi|148370476|gb|ABQ60455.1| putative outer membrane protein [Brucella ovis ATCC 25840] Length = 228 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 69/200 (34%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNG----------SFGEEAHHNAGGSIFAGYNVEDSC- 90 V +NG Y G Y G+ G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDPTDLGDIKPDGFLGGLYAGYNFDLGNS 90 Query: 91 IMYGVEGDVRYTVPVLADNI----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y + + G++R R GY V D L Y G Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 150 AFGSLRNRGEFEGAGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228 >gi|17988112|ref|NP_540746.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|23501033|ref|NP_697160.1| outer membrane protein [Brucella suis 1330] gi|62289100|ref|YP_220893.1| hypothetical protein BruAb1_0116 [Brucella abortus bv. 1 str. 9-941] gi|82699038|ref|YP_413612.1| outer membrane protein [Brucella melitensis biovar Abortus 2308] gi|161618107|ref|YP_001591994.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365] gi|163842394|ref|YP_001626798.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|189023375|ref|YP_001934143.1| outer membrane protein [Brucella abortus S19] gi|225851659|ref|YP_002731892.1| outer membrane protein [Brucella melitensis ATCC 23457] gi|254690429|ref|ZP_05153683.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|254694917|ref|ZP_05156745.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|254696123|ref|ZP_05157951.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|254700932|ref|ZP_05162760.1| outer membrane protein [Brucella suis bv. 5 str. 513] gi|254705300|ref|ZP_05167128.1| outer membrane protein [Brucella suis bv. 3 str. 686] gi|254707183|ref|ZP_05169011.1| outer membrane protein [Brucella pinnipedialis M163/99/10] gi|254709272|ref|ZP_05171083.1| outer membrane protein [Brucella pinnipedialis B2/94] gi|254713305|ref|ZP_05175116.1| outer membrane protein [Brucella ceti M644/93/1] gi|254716341|ref|ZP_05178152.1| outer membrane protein [Brucella ceti M13/05/1] gi|254731460|ref|ZP_05190038.1| outer membrane protein [Brucella abortus bv. 4 str. 292] gi|256030795|ref|ZP_05444409.1| outer membrane protein [Brucella pinnipedialis M292/94/1] gi|256045911|ref|ZP_05448785.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1] gi|256112625|ref|ZP_05453546.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether] gi|256158816|ref|ZP_05456677.1| outer membrane protein [Brucella ceti M490/95/1] gi|256254201|ref|ZP_05459737.1| outer membrane protein [Brucella ceti B1/94] gi|256258681|ref|ZP_05464217.1| outer membrane protein [Brucella abortus bv. 9 str. C68] gi|256264830|ref|ZP_05467362.1| Omp25c [Brucella melitensis bv. 2 str. 63/9] gi|260546397|ref|ZP_05822137.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260563196|ref|ZP_05833682.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260567237|ref|ZP_05837707.1| Omp25c [Brucella suis bv. 4 str. 40] gi|260755976|ref|ZP_05868324.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260759200|ref|ZP_05871548.1| outer membrane protein [Brucella abortus bv. 4 str. 292] gi|260760488|ref|ZP_05872834.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884997|ref|ZP_05896611.1| Omp25c [Brucella abortus bv. 9 str. C68] gi|261215251|ref|ZP_05929532.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|261218122|ref|ZP_05932403.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261221349|ref|ZP_05935630.1| Omp25c [Brucella ceti B1/94] gi|261314664|ref|ZP_05953861.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261316778|ref|ZP_05955975.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261321031|ref|ZP_05960228.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261751447|ref|ZP_05995156.1| outer membrane protein [Brucella suis bv. 5 str. 513] gi|261756010|ref|ZP_05999719.1| outer membrane protein [Brucella suis bv. 3 str. 686] gi|265987849|ref|ZP_06100406.1| Omp25c [Brucella pinnipedialis M292/94/1] gi|265992323|ref|ZP_06104880.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1] gi|265994065|ref|ZP_06106622.1| Omp25c [Brucella melitensis bv. 3 str. Ether] gi|265997309|ref|ZP_06109866.1| Omp25c [Brucella ceti M490/95/1] gi|297247516|ref|ZP_06931234.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5 str. B3196] gi|17983866|gb|AAL53010.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|23346897|gb|AAN29075.1| outer membrane protein, putative [Brucella suis 1330] gi|46251229|gb|AAS84585.1| Omp25c [Brucella abortus] gi|46251233|gb|AAS84587.1| Omp25c [Brucella canis] gi|46251237|gb|AAS84589.1| Omp25c [Brucella pinnipedialis] gi|46251239|gb|AAS84590.1| Omp25c [Brucella ceti] gi|46251241|gb|AAS84591.1| Omp25c [Brucella ceti] gi|46251243|gb|AAS84592.1| Omp25c [Brucella ceti] gi|62195232|gb|AAX73532.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615139|emb|CAJ10072.1| outer membrane protein, putative [Brucella melitensis biovar Abortus 2308] gi|161334918|gb|ABX61223.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365] gi|163673117|gb|ABY37228.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|189018947|gb|ACD71669.1| outer membrane protein, putative [Brucella abortus S19] gi|225640024|gb|ACN99937.1| outer membrane protein [Brucella melitensis ATCC 23457] gi|260096504|gb|EEW80380.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260153212|gb|EEW88304.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260156755|gb|EEW91835.1| Omp25c [Brucella suis bv. 4 str. 40] gi|260669518|gb|EEX56458.1| outer membrane protein [Brucella abortus bv. 4 str. 292] gi|260670923|gb|EEX57744.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676084|gb|EEX62905.1| outer membrane protein [Brucella abortus bv. 6 str. 870] gi|260874525|gb|EEX81594.1| Omp25c [Brucella abortus bv. 9 str. C68] gi|260916858|gb|EEX83719.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|260919933|gb|EEX86586.1| Omp25c [Brucella ceti B1/94] gi|260923211|gb|EEX89779.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261293721|gb|EEX97217.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261296001|gb|EEX99497.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261303690|gb|EEY07187.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261741200|gb|EEY29126.1| outer membrane protein [Brucella suis bv. 5 str. 513] gi|261745763|gb|EEY33689.1| outer membrane protein [Brucella suis bv. 3 str. 686] gi|262551777|gb|EEZ07767.1| Omp25c [Brucella ceti M490/95/1] gi|262765046|gb|EEZ10967.1| Omp25c [Brucella melitensis bv. 3 str. Ether] gi|263003389|gb|EEZ15682.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1] gi|263095286|gb|EEZ18913.1| Omp25c [Brucella melitensis bv. 2 str. 63/9] gi|264660046|gb|EEZ30307.1| Omp25c [Brucella pinnipedialis M292/94/1] gi|289467873|gb|ADC95621.1| 25kDa outer membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. M5] gi|297174685|gb|EFH34032.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5 str. B3196] gi|326408139|gb|ADZ65204.1| outer membrane protein, putative [Brucella melitensis M28] gi|326537850|gb|ADZ86065.1| outer membrane protein [Brucella melitensis M5-90] Length = 228 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V +NG Y G Y ++ + G G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90 Query: 91 IMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y + + G++R R GY V D L Y G Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228 >gi|256368583|ref|YP_003106089.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915] gi|255998741|gb|ACU47140.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915] Length = 228 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V +NG Y G Y ++ + G G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90 Query: 91 IMYGVEGDVRYTV----------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y A + G++R R GY V D L Y G Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAAAFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228 >gi|225627449|ref|ZP_03785486.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|260563986|ref|ZP_05834472.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M] gi|260566481|ref|ZP_05836951.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40] gi|261758166|ref|ZP_06001875.1| outer membrane protein 25b [Brucella sp. F5/99] gi|265999479|ref|ZP_05466559.2| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9] gi|294852320|ref|ZP_06792993.1| outer membrane protein [Brucella sp. NVSL 07-0026] gi|225617454|gb|EEH14499.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|260154002|gb|EEW89094.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M] gi|260155999|gb|EEW91079.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40] gi|261738150|gb|EEY26146.1| outer membrane protein 25b [Brucella sp. F5/99] gi|263094215|gb|EEZ18092.1| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9] gi|294820909|gb|EFG37908.1| outer membrane protein [Brucella sp. NVSL 07-0026] Length = 243 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91 V +NG Y G Y + + G ++AGYN + Sbjct: 38 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 97 Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + GV+GD+ Y + + S G++R R G + D + Y G Sbjct: 98 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 156 Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 157 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 215 Query: 192 --------------GFYNTISLGVGMKF 205 + I LGV KF Sbjct: 216 SVVDGDLSVEARNKFKTHDIRLGVAYKF 243 >gi|156739528|gb|ABU93424.1| Omp25 [Brucella melitensis] Length = 124 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 12/126 (9%) Query: 62 ALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIH 111 LY G +A + GSI FAG+N + I+YGVEGD Y+ + D + Sbjct: 1 GLYLGYGWNKAKTSXVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLE 60 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 61 VKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 118 Query: 172 LSESLV 177 L+++++ Sbjct: 119 LTDNIL 124 >gi|156739520|gb|ABU93420.1| Omp25 [Brucella canis] gi|156739522|gb|ABU93421.1| Omp25 [Brucella canis] Length = 128 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%) Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPV 105 G Y GL Y G +A + GSI FAG+N + I+YGVEGD Y+ Sbjct: 1 GGYTGL---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAK 57 Query: 106 LA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 + D + G GSLR R GY++ + ++ Y T G +Q + + +G TAG Sbjct: 58 KSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAG 116 Query: 165 VGVEVGGLSESLV 177 G+E L+++++ Sbjct: 117 AGLEA-KLTDNIL 128 >gi|182677110|ref|YP_001831256.1| porin [Beijerinckia indica subsp. indica ATCC 9039] gi|182632993|gb|ACB93767.1| porin [Beijerinckia indica subsp. indica ATCC 9039] Length = 244 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 82/221 (37%), Gaps = 33/221 (14%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 L + S + +AS +A AAD RA +P + G Y G Sbjct: 1 MLRTIIHSSIVIMASSVAALAADLPNRAAPPTVPYLPPSP-------AFSWTGVYLGGQI 53 Query: 63 LYNGSFGEEAH----------HNAGGSIFAGYNVEDSCIMYGVEGDVR---YTVPVLA-- 107 Y + G G+N + S + G EGDV Y+ V Sbjct: 54 GYQFGRDSITAPGLFSVGHSPNGVVGGAHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPV 113 Query: 108 --DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-------ETGKAGEITPIA 158 + S + GSLR R G D +L+YAT G A + +T Sbjct: 114 FRTQLTSRIPVDGSLRGRIGAAW-DRVLVYATGGAAFASIKHGYIGSSLVPGSATLTNDR 172 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199 +G T G GVE ++++ R++YR + Y + F TI++ Sbjct: 173 VGWTVGGGVEY-AMTDNWSVRVDYRYTDYGNISDFPGTITV 212 >gi|306842592|ref|ZP_07475241.1| outer membrane protein [Brucella sp. BO2] gi|306287237|gb|EFM58725.1| outer membrane protein [Brucella sp. BO2] Length = 228 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 71/200 (35%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V +NG Y G Y ++ + G G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90 Query: 91 IMYGVEGDVRYTVPVL----------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y A + G++R R GY V D L Y G Sbjct: 91 VVLGIDGDVTYNDVSKKIDFLDENDAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGDKDYGFDD 208 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228 >gi|157310311|emb|CAN43867.1| outer membrane protein 25b [Brucella microti CCM 4915] gi|157310313|emb|CAN43868.1| outer membrane protein 25b [Brucella microti] Length = 245 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91 V +NG Y G Y + + G ++AGYN + Sbjct: 40 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 99 Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + GV+GD+ Y + + S G++R R G + D + Y G Sbjct: 100 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 158 Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 159 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 217 Query: 192 --------------GFYNTISLGVGMKF 205 + I LGV KF Sbjct: 218 SVVDGDLSVEARNKFKTHDIRLGVAYKF 245 >gi|156739532|gb|ABU93426.1| Omp25 [Brucella suis] gi|156739566|gb|ABU93443.1| Omp25 [Brucella melitensis] gi|156739572|gb|ABU93446.1| Omp25 [Brucella melitensis] gi|156739576|gb|ABU93448.1| Omp25 [Brucella melitensis] Length = 106 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132 + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + + Sbjct: 4 DDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 62 Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 + Y T G +Q + + +G TAG G+E L+++++ Sbjct: 63 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 106 >gi|260169699|ref|ZP_05756510.1| outer membrane protein [Brucella sp. F5/99] gi|261759235|ref|ZP_06002944.1| outer membrane protein [Brucella sp. F5/99] gi|261739219|gb|EEY27215.1| outer membrane protein [Brucella sp. F5/99] Length = 228 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 72/200 (36%), Gaps = 38/200 (19%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVEDSC- 90 V + +NG Y G Y ++ + G G ++AGYN + Sbjct: 31 PAPVVVALTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNS 90 Query: 91 IMYGVEGDVRYTVPVLADNI----------HSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++ G++GDV Y + + G++R R GY V D L Y G Sbjct: 91 VVLGIDGDVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAV-DRFLPYIAGGV 149 Query: 141 DVA----QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-- 194 + G + G T G G++ +++++ RLEYR + Y + + Sbjct: 150 AFGSLRNRGEFEGTGFSQSKTLTGWTIGAGMDYAA-TDNVILRLEYRYTDYGNKDYGFDD 208 Query: 195 ---------NTISLGVGMKF 205 N I GV KF Sbjct: 209 AAVTNNFKTNDIRFGVAYKF 228 >gi|156739546|gb|ABU93433.1| Omp25 [Brucella abortus] Length = 109 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYE 127 G + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+ Sbjct: 2 GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYD 61 Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 + + ++ Y T G +Q + + +G TAG G+E L+++++ Sbjct: 62 L-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 109 >gi|17987290|ref|NP_539924.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|23501854|ref|NP_697981.1| outer membrane protein [Brucella suis 1330] gi|163843239|ref|YP_001627643.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|225852477|ref|YP_002732710.1| porin [Brucella melitensis ATCC 23457] gi|254704272|ref|ZP_05166100.1| porin [Brucella suis bv. 3 str. 686] gi|254706827|ref|ZP_05168655.1| porin [Brucella pinnipedialis M163/99/10] gi|256061069|ref|ZP_05451225.1| porin [Brucella neotomae 5K33] gi|256369396|ref|YP_003106904.1| outer membrane protein, putative [Brucella microti CCM 4915] gi|260168691|ref|ZP_05755502.1| outer membrane protein, putative [Brucella sp. F5/99] gi|261314294|ref|ZP_05953491.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10] gi|261325071|ref|ZP_05964268.1| outer membrane protein 25b [Brucella neotomae 5K33] gi|261754939|ref|ZP_05998648.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686] gi|265991062|ref|ZP_06103619.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1] gi|17982969|gb|AAL52188.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|23347791|gb|AAN29896.1| outer membrane protein, putative [Brucella suis 1330] gi|46251214|gb|AAS84578.1| Omp25b [Brucella neotomae] gi|163673962|gb|ABY38073.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|225640842|gb|ACO00756.1| porin [Brucella melitensis ATCC 23457] gi|255999556|gb|ACU47955.1| outer membrane protein, putative [Brucella microti CCM 4915] gi|261301051|gb|EEY04548.1| outer membrane protein 25b [Brucella neotomae 5K33] gi|261303320|gb|EEY06817.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10] gi|261744692|gb|EEY32618.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686] gi|263001846|gb|EEZ14421.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1] gi|326408994|gb|ADZ66059.1| porin [Brucella melitensis M28] Length = 236 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91 V +NG Y G Y + + G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90 Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + GV+GD+ Y + + S G++R R G + D + Y G Sbjct: 91 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 149 Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 150 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 208 Query: 192 --------------GFYNTISLGVGMKF 205 + I LGV KF Sbjct: 209 SVVDGDLSVEARNKFKTHDIRLGVAYKF 236 >gi|156739538|gb|ABU93429.1| Omp25 [Brucella abortus] gi|156739542|gb|ABU93431.1| Omp25 [Brucella abortus] gi|156739562|gb|ABU93441.1| Omp25 [Brucella melitensis] gi|156739574|gb|ABU93447.1| Omp25 [Brucella melitensis] gi|156739596|gb|ABU93458.1| Omp25 [Brucella suis] gi|156739600|gb|ABU93460.1| Omp25 [Brucella suis] gi|156739604|gb|ABU93462.1| Omp25 [Brucella suis] gi|156739616|gb|ABU93468.1| Omp25 [Brucella melitensis] gi|156739628|gb|ABU93474.1| Omp25 [Brucella abortus] Length = 108 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYE 127 G + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY+ Sbjct: 1 GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYD 60 Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 + + ++ Y T G +Q + + +G TAG G+E L+++++ Sbjct: 61 L-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 108 >gi|118591879|ref|ZP_01549274.1| outer membrane protein, putative [Stappia aggregata IAM 12614] gi|118435522|gb|EAV42168.1| outer membrane protein, putative [Stappia aggregata IAM 12614] Length = 223 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 89/232 (38%), Gaps = 36/232 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L LA + A + AAD + VP + D+ G Y G Sbjct: 1 MKRLALAGMALTAAATASAPVLAADLPQS-PAPAYEAVPAPQQSI------DWTGLYVGG 53 Query: 61 SALYN-GSFGEEAHHNAG---------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN 109 + + G F +A +N G G ++ GYN + I+ G E D T + + Sbjct: 54 NLGWAFGQFDNKAGNNTGLGVDANGIAGGLYTGYNFQVTPNIVVGAEADFSLTDLEKSKS 113 Query: 110 -----IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 + S + R R GY D L+Y G +A +G + A+G T G Sbjct: 114 NGGLTLRSKSDWNSNFRGRVGYAF-DRYLVYGAGGLAIADLEVSGNGDTDSKTALGWTLG 172 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYN-----------TISLGVGMKF 205 G E ++ ++ A+LEY + + + N + +G+G KF Sbjct: 173 AGGEA-AITNNVTAKLEYVYQDFGEQDFNLNGTGVSSDFNNSQVRMGIGYKF 223 >gi|265994897|ref|ZP_06107454.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether] gi|262766010|gb|EEZ11799.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether] Length = 236 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 79/247 (31%), Gaps = 56/247 (22%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + S++ L + A+AAD V V +NG Y G Sbjct: 2 TIKSLLLASTVVLVAATGAKAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 51 Query: 63 LYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA----- 107 Y + + G ++AGYN + + GV+GD+ Y + Sbjct: 52 GYGWGHSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTD 111 Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGE 153 + S G++R R G + D + Y G Sbjct: 112 PDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVS 170 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTIS 198 + G AG GV+ +++++ RLEYR + Y + + I Sbjct: 171 QSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIR 229 Query: 199 LGVGMKF 205 LGV KF Sbjct: 230 LGVAYKF 236 >gi|256044638|ref|ZP_05447542.1| porin [Brucella melitensis bv. 1 str. Rev.1] gi|326538706|gb|ADZ86921.1| porin [Brucella melitensis M5-90] Length = 240 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 46/208 (22%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91 V +NG Y G Y + + G ++AGYN + Sbjct: 35 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 94 Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + GV+GD+ Y + + S G++R R G + D + Y G Sbjct: 95 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 153 Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 154 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 212 Query: 192 --------------GFYNTISLGVGMKF 205 + I LGV KF Sbjct: 213 SVVDGDLSVEARNKFKTHDIRLGVAYKF 240 >gi|156739524|gb|ABU93422.1| Omp25 [Brucella neotomae] Length = 128 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 15/133 (11%) Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPV 105 G Y GL Y G +A + GSI FAG+N + I+YGVEGD Y+ Sbjct: 1 GGYTGL---YLGYGWNKAKTSTVGSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAK 57 Query: 106 LA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 + D + G GSLR R GY++ + ++ Y T G +Q + + +G TAG Sbjct: 58 KSKDGLEVKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAG 116 Query: 165 VGVEVGGLSESLV 177 G+E L+++++ Sbjct: 117 AGLEA-KLTDNIL 128 >gi|256113516|ref|ZP_05454350.1| porin [Brucella melitensis bv. 3 str. Ether] Length = 240 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 79/247 (31%), Gaps = 56/247 (22%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + S++ L + A+AAD V V +NG Y G Sbjct: 6 TIKSLLLASTVVLVAATGAKAADAVIEQE----------PAPVVVAPTFTWNGAYLGGQI 55 Query: 63 LYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA----- 107 Y + + G ++AGYN + + GV+GD+ Y + Sbjct: 56 GYGWGHSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTD 115 Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGE 153 + S G++R R G + D + Y G Sbjct: 116 PDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVS 174 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTIS 198 + G AG GV+ +++++ RLEYR + Y + + I Sbjct: 175 QSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIR 233 Query: 199 LGVGMKF 205 LGV KF Sbjct: 234 LGVAYKF 240 >gi|256809485|gb|ACV30843.1| 25 kDa outer membrane protein [Ochrobactrum cytisi] Length = 130 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 22/142 (15%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V S+ L +A AAD ++ P + + ++ + G Y GL Y G Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49 Query: 68 FGEEAHHNAGG---------SIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117 +A + G +AG+N + +YGVEGD Y+ D + G Sbjct: 50 GWNKAKTDTVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109 Query: 118 GSLRIRGGYEVSDSLLLYATVG 139 GSLR R GY++ + ++ Y T G Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130 >gi|156739536|gb|ABU93428.1| Omp25 [Brucella abortus] Length = 105 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%) Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132 + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + + Sbjct: 4 DDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 62 Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 + Y T G +Q + + +G TAG G+E L++++ Sbjct: 63 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNI 105 >gi|218517219|ref|ZP_03514059.1| outer membrane protein [Rhizobium etli 8C-3] Length = 153 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 14/150 (9%) Query: 68 FGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIR 123 G A + G +F AGYN + I+ G+EG++ Y G++R R Sbjct: 6 GGASASEDFNGGVFGGFAGYNFQFDNIVVGIEGNLEYNWNEEEALGADVGTDWAGAVRGR 65 Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 GY D L+Y G + Y + T G T G GV+ ++ ++ AR EY Sbjct: 66 VGYAF-DKALIYGAAGWAATRGYVDAPGFDKETETFNGYTVGAGVDF-AITNNIFARGEY 123 Query: 183 RASKYS-------KVEGFYNTISLGVGMKF 205 R + Y V+ + + G+G+KF Sbjct: 124 RYNDYGERDILGVDVDLDQHELKFGIGVKF 153 >gi|256809411|gb|ACV30806.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 22/142 (15%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V S+ L +A AAD ++ P + + ++ + G Y GL Y G Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49 Query: 68 FGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117 +A + G++ +AG+N + +YGVEGD Y+ D + G Sbjct: 50 GWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109 Query: 118 GSLRIRGGYEVSDSLLLYATVG 139 GSLR R GY++ + ++ Y T G Sbjct: 110 GSLRARLGYDL-NPIMPYITAG 130 >gi|256809513|gb|ACV30857.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 22/142 (15%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V S+ L +A AAD ++ P + + ++ + G Y GL Y G Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49 Query: 68 FGEEAHHNAGG---------SIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117 +A +A G +AG+N + +YGVEGD Y+ + D + G Sbjct: 50 GWNKAKTDAVGTIKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKSKDGLEVKQGFE 109 Query: 118 GSLRIRGGYEVSDSLLLYATVG 139 GSLR R GY++ + ++ Y T G Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130 >gi|256809429|gb|ACV30815.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809431|gb|ACV30816.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809433|gb|ACV30817.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809435|gb|ACV30818.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809437|gb|ACV30819.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809439|gb|ACV30820.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809441|gb|ACV30821.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809443|gb|ACV30822.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809445|gb|ACV30823.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809519|gb|ACV30860.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809521|gb|ACV30861.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809525|gb|ACV30863.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809539|gb|ACV30870.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 16/139 (11%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V S+ L +A AAD ++ P + + ++ + G Y GL Y + Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGLYLGYGWN 52 Query: 68 ------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSL 120 G + +AG+N + +YGVEGD Y+ D + G GSL Sbjct: 53 KVKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFEGSL 112 Query: 121 RIRGGYEVSDSLLLYATVG 139 R R GY++ + ++ Y T G Sbjct: 113 RARLGYDL-NPVMPYITAG 130 >gi|256809401|gb|ACV30801.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809403|gb|ACV30802.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809405|gb|ACV30803.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809407|gb|ACV30804.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809409|gb|ACV30805.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809413|gb|ACV30807.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809415|gb|ACV30808.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809417|gb|ACV30809.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809419|gb|ACV30810.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809421|gb|ACV30811.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809423|gb|ACV30812.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809425|gb|ACV30813.1| 25 kDa outer membrane protein [Ochrobactrum lupini] gi|256809427|gb|ACV30814.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809447|gb|ACV30824.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809449|gb|ACV30825.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809451|gb|ACV30826.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809453|gb|ACV30827.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809455|gb|ACV30828.1| 25 kDa outer membrane protein [Ochrobactrum anthropi ATCC 49188] gi|256809457|gb|ACV30829.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809459|gb|ACV30830.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809461|gb|ACV30831.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809463|gb|ACV30832.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809465|gb|ACV30833.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809467|gb|ACV30834.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809469|gb|ACV30835.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809471|gb|ACV30836.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809473|gb|ACV30837.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809475|gb|ACV30838.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809477|gb|ACV30839.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809479|gb|ACV30840.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809481|gb|ACV30841.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809483|gb|ACV30842.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809487|gb|ACV30844.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809489|gb|ACV30845.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809491|gb|ACV30846.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809493|gb|ACV30847.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809495|gb|ACV30848.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809497|gb|ACV30849.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809499|gb|ACV30850.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809501|gb|ACV30851.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809503|gb|ACV30852.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809505|gb|ACV30853.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809507|gb|ACV30854.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809509|gb|ACV30855.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809511|gb|ACV30856.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809515|gb|ACV30858.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809517|gb|ACV30859.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809523|gb|ACV30862.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809527|gb|ACV30864.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809529|gb|ACV30865.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809531|gb|ACV30866.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809533|gb|ACV30867.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] gi|256809535|gb|ACV30868.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 22/142 (15%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V S+ L +A AAD ++ P + + ++ + G Y GL Y G Sbjct: 1 VIASAALLPFSATAFAADAIQEQ--------PPVPAPVEMAPQYSWAGGYTGL---YLGY 49 Query: 68 FGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117 +A + G++ +AG+N + +YGVEGD Y+ D + G Sbjct: 50 GWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109 Query: 118 GSLRIRGGYEVSDSLLLYATVG 139 GSLR R GY++ + ++ Y T G Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130 >gi|256254959|ref|ZP_05460495.1| porin [Brucella ceti B1/94] gi|261222144|ref|ZP_05936425.1| Omp25b [Brucella ceti B1/94] gi|265998108|ref|ZP_06110665.1| Omp25b [Brucella ceti M490/95/1] gi|46251220|gb|AAS84581.1| Omp25b [Brucella ceti] gi|46251222|gb|AAS84582.1| Omp25b [Brucella ceti] gi|260920728|gb|EEX87381.1| Omp25b [Brucella ceti B1/94] gi|262552576|gb|EEZ08566.1| Omp25b [Brucella ceti M490/95/1] Length = 236 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 31/179 (17%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91 V +NG Y G Y + + G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90 Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + GV+GD+ Y + + S G++R R G + D + Y G Sbjct: 91 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 149 Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 150 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKD 207 >gi|156739580|gb|ABU93450.1| Omp25 [Brucella canis] Length = 105 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132 + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + + Sbjct: 3 DDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 61 Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 + Y T G +Q + + +G TAG G+E L+++++ Sbjct: 62 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 105 >gi|158425585|ref|YP_001526877.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans ORS 571] gi|158332474|dbj|BAF89959.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans ORS 571] Length = 212 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 55/217 (25%), Positives = 80/217 (36%), Gaps = 26/217 (11%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 + V + +L A AAD R A A+ P + G Y G + Y Sbjct: 5 VLVTGALASLLFAAPAMAADLSRPAPAM-------PASAVSAPPVFSWTGFYIGANTGYA 57 Query: 66 GSFGEEAHHNAG-------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN-IHSLHGI 116 G+ + G G GYN + + ++ G+E DV+ + + S Sbjct: 58 WGSGKGSADALGLDPDGWFGGGQVGYNYQFQNNMLVGLEADVQGGGISAGNGPVSSKLES 117 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 G++R R GY V D +L Y T G T + G T G GVE L+ + Sbjct: 118 FGTVRARLGYAV-DRVLPYVTGGFAWGNNKITDFGTSQSQTLTGWTVGGGVEY-ALTNNW 175 Query: 177 VARLEYRASKYSKVEGF--------YNTISLGVGMKF 205 AR EY + K + +T LGV KF Sbjct: 176 TARAEYLYTDLGKADYKALGEAGVAASTARLGVNYKF 212 >gi|256159691|ref|ZP_05457444.1| porin [Brucella ceti M490/95/1] Length = 240 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 31/179 (17%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91 V +NG Y G Y + + G ++AGYN + Sbjct: 35 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 94 Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + GV+GD+ Y + + S G++R R G + D + Y G Sbjct: 95 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGV 153 Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 154 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKD 211 >gi|156739612|gb|ABU93466.1| Omp25 [Brucella canis] Length = 104 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%) Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSL 132 + FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + + Sbjct: 2 DDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPV 60 Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 + Y T G +Q + + +G TAG G+E L+++++ Sbjct: 61 MPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 104 >gi|90422419|ref|YP_530789.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisB18] gi|90104433|gb|ABD86470.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisB18] Length = 207 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 25/197 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPI-RHDFNGPYAGLSALYNGSFGEEAHH- 74 SAQAAD Y P+ H + GPY G + Y + Sbjct: 15 GLSSAQAADLPYGGSR--------APYTVYQPLNAHSWAGPYLGGNLGYAWGDVHNSATE 66 Query: 75 --NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEV 128 G + AGYN + +YG+EGD+ T AD+ + G++R R GY Sbjct: 67 PSGVAGGVQAGYNWQSGQFVYGLEGDIAITG---ADDTFASWKFSNPWFGTVRGRAGYSF 123 Query: 129 SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 D+LL+YAT G + + G T G G E GL+++ A++EY Sbjct: 124 -DNLLVYATGGLAFGELKGERFGQSNSSTNAGWTIGAGAEF-GLNQNWSAKVEYLYVDLG 181 Query: 189 ----KVEGFYNTISLGV 201 + G N+ G+ Sbjct: 182 GSNFSITGVQNSYQFGI 198 >gi|254701730|ref|ZP_05163558.1| porin [Brucella suis bv. 5 str. 513] gi|261752281|ref|ZP_05995990.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513] gi|261742034|gb|EEY29960.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513] Length = 236 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDSC-I 91 V +NG Y G Y + + G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90 Query: 92 MYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + GV+GD+ Y + + S G++R R + D + Y G Sbjct: 91 VLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMSVAM-DRWMPYIAGGV 149 Query: 141 DVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 150 AFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDF 208 Query: 192 --------------GFYNTISLGVGMKF 205 + I LGV KF Sbjct: 209 SVVDGDLSVEARNKFKTHDIRLGVAYKF 236 >gi|156739534|gb|ABU93427.1| Omp25 [Brucella suis] gi|156739618|gb|ABU93469.1| Omp25 [Brucella melitensis] Length = 98 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%) Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 FAG+N + I+YGVEGD Y+ + D + G GSLR R GY++ + ++ Y T Sbjct: 1 GAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDL-NPVMPYLT 59 Query: 138 VGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 G +Q + + +G TAG G+E L+++++ Sbjct: 60 AGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 98 >gi|256809537|gb|ACV30869.1| 25 kDa outer membrane protein [Ochrobactrum anthropi] Length = 130 Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 22/142 (15%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V + L +A AAD ++ P + ++ + G Y GL Y G Sbjct: 1 VIALAALLPFSATAFAADAIQEQ--------PPVPAPVEKAPQYSWAGGYTGL---YLGY 49 Query: 68 FGEEAHHNAGGSI---------FAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGIG 117 +A + G++ +AG+N + +YGVEGD Y+ D + G Sbjct: 50 GWNKAKTDTVGTVKPDDMKAGAYAGWNFQQDQFVYGVEGDAGYSWAKKTKDGLEVKQGFE 109 Query: 118 GSLRIRGGYEVSDSLLLYATVG 139 GSLR R GY++ + ++ Y T G Sbjct: 110 GSLRARLGYDL-NPVMPYITAG 130 >gi|85716040|ref|ZP_01047017.1| putative outer-membrane immunogenic protein precursor [Nitrobacter sp. Nb-311A] gi|85697238|gb|EAQ35119.1| putative outer-membrane immunogenic protein precursor [Nitrobacter sp. Nb-311A] Length = 206 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 16/195 (8%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M K +A + + A +AQAAD RA + + + GPY G Sbjct: 1 MSKTLIAALATMASTALIGTAQAADFSYRAPYTVNQPL----------NAFSWAGPYLGG 50 Query: 61 SALYNGSFGEEA---HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 + Y + + G + AGYN + +++G+EGD++ + Sbjct: 51 NLGYAWGSVQNSLTKPDGVFGGVQAGYNWQSGSMVFGLEGDIQANAANDTFAAWKFSNPW 110 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 G++R R GY S+ +L+Y T G + A + G T GVG EV G+ ++ Sbjct: 111 FGTVRGRLGYAFSN-VLVYGTGGLAFGKLRAETFALSESHTNAGWTVGVGAEV-GIYQNW 168 Query: 177 VARLEYRASKYSKVE 191 A++EY S Sbjct: 169 TAKVEYLYVDLSSSN 183 >gi|153007477|ref|YP_001368692.1| porin [Ochrobactrum anthropi ATCC 49188] gi|151559365|gb|ABS12863.1| porin [Ochrobactrum anthropi ATCC 49188] Length = 229 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 80/241 (33%), Gaps = 51/241 (21%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 K + +G S LA+ + A AAD + + G Y G Sbjct: 2 KFRILLGASLLAVVASTGAYAADAIVSQEPAPM-----------AAPAFSWGGAYIGGEI 50 Query: 63 LYNGSFG-----------EEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADN- 109 + E + G ++AGYN + ++ GV+G+ Y + + Sbjct: 51 GWGWGRAKLDDKSTDQSNEFKPNGFIGGVYAGYNFDMGNNVILGVDGNFDYNDLKKSHDY 110 Query: 110 ----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG----EIT 155 + G++R R GY V D + Y G + G Sbjct: 111 ISNSNAVQTSAETKLQWSGAVRARAGYAV-DRFMPYIAGGVAFGGVKNSLNVGGSDYNND 169 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF-----------YNTISLGVGMK 204 G T G GV+ +++++ RLEYR + + + N I LGV K Sbjct: 170 KTLTGWTVGTGVDYAA-TDNVLLRLEYRYTDFGNKDFDLGNTATRGSFKTNDIRLGVAYK 228 Query: 205 F 205 F Sbjct: 229 F 229 >gi|306841014|ref|ZP_07473744.1| outer membrane protein Omp31 [Brucella sp. BO2] gi|306846349|ref|ZP_07478900.1| outer membrane protein Omp31 [Brucella sp. BO1] gi|306273192|gb|EFM55083.1| outer membrane protein Omp31 [Brucella sp. BO1] gi|306288964|gb|EFM60252.1| outer membrane protein Omp31 [Brucella sp. BO2] Length = 239 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 82/250 (32%), Gaps = 64/250 (25%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S A+ SA AAD + + G Y G++A Y G Sbjct: 3 SVLLASFAMLFASSAMAADAIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50 Query: 67 SFG-------------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVR 100 + G + AGYN + D+ + G E D + Sbjct: 51 GKFKHPFSVAGLPTAGMNEEGGALSGSLDVTSSGFVGGVQAGYNWQLDNGFVLGAEADFQ 110 Query: 101 YT---------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK- 150 + + L N + G++R R GY ++ LL+Y T G + + Sbjct: 111 GSTVKGDISAHLDDLDGNAETKVEWFGTVRARLGYTATERLLVYGTGGLAYGKVKSSLGI 170 Query: 151 ---AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------N 195 + G T G G E ++ + + EY + K + + Sbjct: 171 EDWGVSSSKTKAGWTVGAGAEY-AINNNWTLKSEYLYTDLGKHDLINVNELSLKNDVKFH 229 Query: 196 TISLGVGMKF 205 T+ +G+ KF Sbjct: 230 TVRVGLNYKF 239 >gi|115522948|ref|YP_779859.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisA53] gi|115516895|gb|ABJ04879.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisA53] Length = 207 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 65/179 (36%), Gaps = 13/179 (7%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH--- 73 SAQAAD + V + + + GPY G + Y Sbjct: 15 GLVSAQAADLSYGRSYAPYTVNQPLN-------AYSWAGPYLGGNLGYAWGDIHNNSAKP 67 Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-IGGSLRIRGGYEVSDSL 132 G I GYN + ++YG+EGD++ T + G++R R GY +++ Sbjct: 68 SGLSGGIQGGYNWQSGQMVYGLEGDLQITGANDTFAQYKFSNPWFGTVRGRIGYAF-NNV 126 Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 + Y T G + + G T G G E GL + A++EY + Sbjct: 127 MFYGTGGLAYGELTAEMGGLSQSHTNAGFTVGAGAEF-GLMPNWTAKIEYLYVDLGESN 184 >gi|148558438|ref|YP_001257410.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840] gi|16611666|gb|AAL27291.1|AF366068_1 outer membrane protein Omp31 [Brucella ovis] gi|16611669|gb|AAL27292.1|AF366069_1 outer membrane protein Omp31 [Brucella ovis] gi|16611672|gb|AAL27293.1|AF366070_1 outer membrane protein Omp31 [Brucella ovis] gi|16611675|gb|AAL27294.1|AF366071_1 outer membrane protein Omp31 [Brucella ovis] gi|16611678|gb|AAL27295.1|AF366072_1 outer membrane protein Omp31 [Brucella ovis] gi|148369723|gb|ABQ62595.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840] Length = 240 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 83/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRY----- 101 + G + AGYN + D+ ++ G E D + Sbjct: 54 GKFKHPFSSFDKEDGEHVSGSPDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGLSVTG 113 Query: 102 ----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L N + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASSLEGNAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDAPA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|163844591|ref|YP_001622246.1| hypothetical protein BSUIS_B0425 [Brucella suis ATCC 23445] gi|16611654|gb|AAL27287.1|AF366064_1 outer membrane protein Omp31 [Brucella suis ATCC 23445] gi|163675314|gb|ABY39424.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 240 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFSSFDKEDIEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWPDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|161620493|ref|YP_001594379.1| porin [Brucella canis ATCC 23365] gi|16611681|gb|AAL27296.1|AF366073_1 outer membrane protein Omp31 [Brucella canis] gi|161337304|gb|ABX63608.1| porin [Brucella canis ATCC 23365] Length = 240 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V P+ T V + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 PISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|256111680|ref|ZP_05452664.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 3 str. Ether] gi|265993151|ref|ZP_06105708.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether] gi|16611648|gb|AAL27285.1|AF366062_1 outer membrane protein Omp31 [Brucella melitensis] gi|262764021|gb|EEZ10053.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether] Length = 240 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V P+ T V + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHMWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|75676711|ref|YP_319132.1| putative outer-membrane immunogenic protein precursor [Nitrobacter winogradskyi Nb-255] gi|74421581|gb|ABA05780.1| putative outer-membrane immunogenic protein precursor [Nitrobacter winogradskyi Nb-255] Length = 206 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 16/195 (8%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M ++ +A + + A +A AAD RA + + + GPY G Sbjct: 1 MTRITIAALAAMASTALIGAAHAADFSYRAPYTVNQPL----------DAFSWAGPYLGG 50 Query: 61 SALYNGSFGEEA---HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-DNIHSLHGI 116 + Y + + G + AG+N + +++G+EGD++ + Sbjct: 51 NLGYAWGSVQNSLTRPDGVFGGVQAGFNWQSGPVVFGLEGDIQANAANDTFAAWKFSNPW 110 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 G++R R GY +++L+Y T G + + + G T GVG EV G+ ++ Sbjct: 111 FGTVRGRIGYAF-NNVLVYGTGGLAFGKLRAETFGLSESHTSAGWTVGVGAEV-GIYQNW 168 Query: 177 VARLEYRASKYSKVE 191 A++EY S Sbjct: 169 TAKVEYLYVDLSSSS 183 >gi|254706065|ref|ZP_05167893.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis M163/99/10] gi|261313502|ref|ZP_05952699.1| outer-membrane immunogenic protein [Brucella pinnipedialis M163/99/10] gi|261302528|gb|EEY06025.1| outer-membrane immunogenic protein [Brucella pinnipedialis M163/99/10] Length = 240 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V P+ T V + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFFSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|23500173|ref|NP_699613.1| outer membrane protein [Brucella suis 1330] gi|225628865|ref|ZP_03786899.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|225686232|ref|YP_002734204.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457] gi|254699679|ref|ZP_05161507.1| outer membrane protein Omp31 precursor [Brucella suis bv. 5 str. 513] gi|254702817|ref|ZP_05164645.1| outer membrane protein Omp31 precursor [Brucella suis bv. 3 str. 686] gi|254711636|ref|ZP_05173447.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis B2/94] gi|254712249|ref|ZP_05174060.1| outer membrane protein Omp31 precursor [Brucella ceti M644/93/1] gi|254715320|ref|ZP_05177131.1| outer membrane protein Omp31 precursor [Brucella ceti M13/05/1] gi|256015206|ref|YP_003105215.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915] gi|256029730|ref|ZP_05443344.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis M292/94/1] gi|256043319|ref|ZP_05446254.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 1 str. Rev.1] gi|256059364|ref|ZP_05449566.1| outer membrane protein Omp31 precursor [Brucella neotomae 5K33] gi|256157882|ref|ZP_05455800.1| outer membrane protein Omp31 precursor [Brucella ceti M490/95/1] gi|256253156|ref|ZP_05458692.1| outer membrane protein Omp31 precursor [Brucella ceti B1/94] gi|256262636|ref|ZP_05465168.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9] gi|260167181|ref|ZP_05753992.1| outer membrane protein, 31 kDa [Brucella sp. F5/99] gi|260564527|ref|ZP_05835012.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M] gi|261217050|ref|ZP_05931331.1| outer membrane immunogenic protein [Brucella ceti M13/05/1] gi|261220262|ref|ZP_05934543.1| outer-membrane immunogenic protein [Brucella ceti B1/94] gi|261319260|ref|ZP_05958457.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94] gi|261319920|ref|ZP_05959117.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1] gi|261323324|ref|ZP_05962521.1| outer-membrane immunogenic protein [Brucella neotomae 5K33] gi|261750144|ref|ZP_05993853.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513] gi|261753417|ref|ZP_05997126.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686] gi|261756585|ref|ZP_06000294.1| outer-membrane immunogenic protein [Brucella sp. F5/99] gi|265986741|ref|ZP_06099298.1| outer-membrane immunogenic protein [Brucella pinnipedialis M292/94/1] gi|265989742|ref|ZP_06102299.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. Rev.1] gi|265996391|ref|ZP_06108948.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1] gi|61229373|sp|P0A3U4|OM31_BRUME RecName: Full=31 kDa outer-membrane immunogenic protein; Flags: Precursor gi|61229374|sp|P0A3U5|OM31_BRUSU RecName: Full=31 kDa outer-membrane immunogenic protein; Flags: Precursor gi|16611645|gb|AAL27284.1|AF366061_1 outer membrane protein Omp31 [Brucella melitensis] gi|16611651|gb|AAL27286.1|AF366063_1 outer membrane protein Omp31 [Brucella suis 1330] gi|16611657|gb|AAL27288.1|AF366065_1 outer membrane protein Omp31 [Brucella suis] gi|16611663|gb|AAL27290.1|AF366067_1 outer membrane protein Omp31 [Brucella suis] gi|16611684|gb|AAL27297.1|AF366074_1 outer membrane protein Omp31 [Brucella neotomae] gi|1457933|gb|AAB36693.1| outer membrane protein [Brucella melitensis] gi|23463773|gb|AAN33618.1| outer membrane protein Omp31 [Brucella suis 1330] gi|46251186|gb|AAS84564.1| Omp31 [Brucella ceti] gi|46251188|gb|AAS84565.1| Omp31 [Brucella pinnipedialis] gi|46251190|gb|AAS84566.1| Omp31 [Brucella ceti] gi|46251192|gb|AAS84567.1| Omp31 [Brucella ceti] gi|157310315|emb|CAN43870.1| outer membrane protein 31 [Brucella microti CCM 4915] gi|157310317|emb|CAN43872.1| outer membrane protein 31 [Brucella microti] gi|225616711|gb|EEH13759.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|225642337|gb|ACO02250.1| outer membrane protein Omp31 precursor [Brucella melitensis ATCC 23457] gi|226433917|gb|ACO56077.1| Omp31 [Brucella melitensis] gi|240265888|gb|ACS50328.1| Omp31 [Brucella melitensis] gi|255997866|gb|ACU49553.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915] gi|260152170|gb|EEW87263.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M] gi|260918846|gb|EEX85499.1| outer-membrane immunogenic protein [Brucella ceti B1/94] gi|260922139|gb|EEX88707.1| outer membrane immunogenic protein [Brucella ceti M13/05/1] gi|261292610|gb|EEX96106.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1] gi|261298483|gb|EEY01980.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94] gi|261299304|gb|EEY02801.1| outer-membrane immunogenic protein [Brucella neotomae 5K33] gi|261736569|gb|EEY24565.1| outer-membrane immunogenic protein [Brucella sp. F5/99] gi|261739897|gb|EEY27823.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513] gi|261743170|gb|EEY31096.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686] gi|262550688|gb|EEZ06849.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1] gi|263000411|gb|EEZ13101.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str. Rev.1] gi|263092421|gb|EEZ16674.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9] gi|264658938|gb|EEZ29199.1| outer-membrane immunogenic protein [Brucella pinnipedialis M292/94/1] Length = 240 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V P+ T V + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSE--------PSAPTAAPVDT-FSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|260568272|ref|ZP_05838741.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40] gi|16611660|gb|AAL27289.1|AF366066_1 outer membrane protein Omp31 [Brucella suis] gi|260154937|gb|EEW90018.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40] Length = 240 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDATAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|256682107|gb|ACV07678.1| OMP31 [Brucella melitensis] Length = 240 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 83/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ +++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERVMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|92118614|ref|YP_578343.1| putative outer-membrane immunogenic protein precursor [Nitrobacter hamburgensis X14] gi|91801508|gb|ABE63883.1| putative outer-membrane immunogenic protein precursor [Nitrobacter hamburgensis X14] Length = 206 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 22/179 (12%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH---HNA 76 +AQAAD R+ + + + + GPY G + Y + + + Sbjct: 20 TAQAADFSYRSPYTVNQPL----------NAYSWAGPYLGGNLGYAWGSVQNSATKPNGV 69 Query: 77 GGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSL 132 G + AGYN + +++G+EGD++ AD+I + G++R R GY +++ Sbjct: 70 FGGVQAGYNWQSGPLVFGLEGDIQAN---AADDIFARWKFSNPWFGTVRGRLGYAF-NNV 125 Query: 133 LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G + G T GVG E G+ ++ A++EY S Sbjct: 126 LIYGTGGLAFGALRAETFGLSESHTNAGWTVGVGAEF-GIYQNWTAKVEYLYVDLSSSN 183 >gi|306845687|ref|ZP_07478256.1| outer membrane protein Omp31 [Brucella sp. BO1] gi|206596728|emb|CAQ68394.1| outer membrane protein 31 [Brucella sp. BO1] gi|306274008|gb|EFM55835.1| outer membrane protein Omp31 [Brucella sp. BO1] Length = 240 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 79/248 (31%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT---- 102 G + AGYN + ++ G E D + + Sbjct: 54 GKFKHPFSAFDTDDNERVSGSLNITSGGFVGGVQAGYNWQFDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISADAGGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDVSA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNHWTLKSEYLYTDLGKRNLINVDDSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|298292421|ref|YP_003694360.1| porin [Starkeya novella DSM 506] gi|296928932|gb|ADH89741.1| porin [Starkeya novella DSM 506] Length = 215 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 59/185 (31%), Gaps = 22/185 (11%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-------HNAGGSIFAGYNVE-DSCIM 92 + G Y G +A Y G+E G G+N + D+ ++ Sbjct: 33 APPAVIAEPVFSWTGFYLGANAGYAWGSGQEGAETLGLDPDGFLGGGQIGFNYQFDNNVV 92 Query: 93 YGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK- 150 G E D + + S G++R R GY + +L Y T G K Sbjct: 93 LGAEADFQGSDIKDERLGFESKMDYFGTVRARLGYAFGN-VLPYVTGGLAWGHTEVNDKL 151 Query: 151 -AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS---------KVEGFYNTISLG 200 A+G T G GVE + + + EY K N + G Sbjct: 152 LGLTSDKTAVGWTVGGGVEY-AFTNNWTVKAEYLYMDLGDDYYASIGDKSGLTANVVRAG 210 Query: 201 VGMKF 205 + KF Sbjct: 211 INYKF 215 >gi|27382580|ref|NP_774109.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27355752|dbj|BAC52734.1| bll7469 [Bradyrhizobium japonicum USDA 110] Length = 208 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 20/179 (11%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHN 75 SA+AAD P A + + GPY G + Y + Sbjct: 19 ASAEAADLSYGQRAPYTVNQPLNA--------YSWAGPYLGGNIGYEWGSVDNNPSKPSG 70 Query: 76 AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDS 131 G I AGYN ++ ++GVEGD++ AD+ + G+LR R GY S+ Sbjct: 71 FVGGIQAGYNFQNGPWVFGVEGDIQ---AAGADDTFAPWKFSNPWFGTLRGRVGYAFSN- 126 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 +L Y T G + + + G T G G EV GL+ + A+LEY S Sbjct: 127 VLFYGTAGLAFGELRAQTFGWTESHTSAGWTIGAGAEV-GLAPNWSAKLEYLYIDLSTS 184 >gi|148253259|ref|YP_001237844.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1] gi|146405432|gb|ABQ33938.1| putative outer membrane protein precursor [Bradyrhizobium sp. BTAi1] Length = 206 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 77/202 (38%), Gaps = 18/202 (8%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 VG + A SAQAAD + GR T+ + + GPY G + Y Sbjct: 6 VGAAVAAALGSVSAQAAD-----FNYGRQAPYTVNQPLN---AYSWAGPYLGGTLGYEWG 57 Query: 68 F---GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-HSLHGIGGSLRIR 123 G + AGYN ++ ++G EGD+ T + G++R R Sbjct: 58 SVGNNPTKPSGLVGGLTAGYNWQNGPWVFGAEGDINLTGANDTFAPWKFSNPWFGTVRGR 117 Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183 GY +++L Y T G + ++G T G G E GL+++ A++EY Sbjct: 118 AGYAF-NNILFYGTGGLAFGGLRGETFGLSESHTSLGWTLGAGAEF-GLAQNWTAKIEYL 175 Query: 184 ASKYSK----VEGFYNTISLGV 201 + G N GV Sbjct: 176 YIDLDSSNFVITGAKNDYRFGV 197 >gi|299134246|ref|ZP_07027439.1| outer membrane protein Omp31 [Afipia sp. 1NLS2] gi|298590993|gb|EFI51195.1| outer membrane protein Omp31 [Afipia sp. 1NLS2] Length = 209 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 25/174 (14%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHN-----AGGSIFAGYNVEDSC-IMYGVEGDVRYTVP 104 + + GPY G + YN FG+ ++ G I GYN + + G+E D++ T Sbjct: 42 YSWAGPYLGANLGYN--FGDVSNSGTSPSGFSGGIQGGYNWQFGTPWVLGLEADLQATG- 98 Query: 105 VLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 AD+ + G++R R GY ++ + ++Y T G Q T T G Sbjct: 99 --ADDTFAAWKFSNPWYGTIRGRVGYAINPNFMIYGTGGLAFGQLKGTMPGLSETHTTAG 156 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGF---------YNTISLGVGMKF 205 T G G E L+ + + EY ++T+ +GV F Sbjct: 157 WTVGGGAEF-ALTNNWSLKAEYMYVDLDSSNFLITGLPNGYQFSTVRVGVNYHF 209 >gi|13471424|ref|NP_102990.1| outer membrane protein [Mesorhizobium loti MAFF303099] gi|14022166|dbj|BAB48776.1| outer membrane protein [Mesorhizobium loti MAFF303099] Length = 225 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 78/231 (33%), Gaps = 55/231 (23%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----- 67 A +A AAD V +++ G Y G S Sbjct: 12 FAALMAGTALAADATVELP---------------VASSYNWTGGYIGAQIGGGWSKVDQP 56 Query: 68 ----------FGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS--- 112 F ++ +G G + AGYN + ++G E D+ T D Sbjct: 57 WGFTEASPNIFDQDNADGSGVVGGLHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDI 116 Query: 113 ---LHGIGGSLRIRGGYEVSDSLLLYATVGPD----VAQKYETGKAGEITPIAIGGTAGV 165 S+R R G+ D +L+Y T G A + G+ + G T G Sbjct: 117 NGFKARWVASVRARAGFAF-DRVLIYGTGGYAYLNGKADTRDVGRQESHSASFNGWTIGA 175 Query: 166 GVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205 G E L++++ R EYR + + + +T+++GV KF Sbjct: 176 GAEY-ALTDNITVRGEYRYADFGSKTVVFNNYVEDISPALHTVTIGVSYKF 225 >gi|39934247|ref|NP_946523.1| outer membrane protein [Rhodopseudomonas palustris CGA009] gi|39648095|emb|CAE26615.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 226 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 19/199 (9%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 + + + +++ AS +AQAAD + V + + GPY G + Sbjct: 19 KMRKVTLAAAAVIAASVSTAQAADMGYYRSNAPYTVNQPLN-------AFSWAGPYLGGN 71 Query: 62 ALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG- 117 Y+ + G + GYN + I++G+EGD++++ AD+ + + Sbjct: 72 LGYSWGNVTNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFS---TADDTFAQYKFSN 128 Query: 118 ---GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ R R GY ++D +L+YAT G Q + + G T G G E + Sbjct: 129 PWFGTGRGRIGYAMND-VLIYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAP 186 Query: 175 SLVARLEYRASKYSKVEGF 193 L A++EY S F Sbjct: 187 KLSAKVEYLYMSLSTSNFF 205 >gi|254720536|ref|ZP_05182347.1| outer membrane protein Omp31 precursor [Brucella sp. 83/13] gi|265985569|ref|ZP_06098304.1| outer-membrane immunogenic protein [Brucella sp. 83/13] gi|306838097|ref|ZP_07470954.1| outer membrane protein Omp31 [Brucella sp. NF 2653] gi|264664161|gb|EEZ34422.1| outer-membrane immunogenic protein [Brucella sp. 83/13] gi|306406834|gb|EFM63056.1| outer membrane protein Omp31 [Brucella sp. NF 2653] Length = 240 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 82/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ + G E D + + Sbjct: 54 GKFKHPFSTFDTEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGGVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RIGLNYKF 240 >gi|86748303|ref|YP_484799.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86571331|gb|ABD05888.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 207 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 19/195 (9%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+KL +A A +AQAAD + G T+ + GPY G Sbjct: 1 MRKLAMAAATVIAATG--STAQAAD----MGYYGSRTPYTVNQPLN---AFSWAGPYLGG 51 Query: 61 SALYNGSFGEEAHH-----NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG 115 + Y +FG ++ G + GYN + I++G+EGD++++ + Sbjct: 52 NLGY--AFGNVTNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFSTANDTFASYKFSN 109 Query: 116 -IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ R R GY ++D +LLYAT G Q + + G T G G E + Sbjct: 110 PWFGTARGRVGYAMND-ILLYATGGLAFGQLKGEYLLSSESHTSAGWTVGAGAEF-AFAP 167 Query: 175 SLVARLEYRASKYSK 189 L A++EY S Sbjct: 168 KLSAKVEYLYGSLST 182 >gi|209886326|ref|YP_002290183.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5] gi|209874522|gb|ACI94318.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5] Length = 208 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 19/170 (11%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHN---AGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106 + GPY G + YN + N G + GYN + ++G+E D++ T Sbjct: 43 FSWAGPYLGANLGYNWGSVSNSGTNPTGFAGGVQGGYNWQFGSPWVFGLEADIQATG--- 99 Query: 107 ADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGT 162 AD+ + G++R R GY ++ + +LY T G + + + ++ G T Sbjct: 100 ADDTFAAWKFSNPWYGTVRGRVGYALNPNFMLYGTGGLAFGELKGSTPFYSASHVSAGWT 159 Query: 163 AGVGVEVGGLSESLVARLEYRASKY--SKVEGFYN-----TISLGVGMKF 205 G G E L+ + + EY S + G N T+ +GV F Sbjct: 160 VGAGAEF-ALNNAWSLKAEYLYVDLDSSNINGLPNGYNFSTVRVGVNYHF 208 >gi|192289773|ref|YP_001990378.1| outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris TIE-1] gi|192283522|gb|ACE99902.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris TIE-1] Length = 207 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 19/196 (9%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + + +++ AS +AQAAD + V + + GPY G + Y Sbjct: 3 KVTLAAAAVIAASVSTAQAADMGYYRSNAPYTVNQPLN-------AFSWAGPYLGGNLGY 55 Query: 65 NG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG---- 117 + + G + GYN + I++G+EGD++++ AD+ + + Sbjct: 56 SWGNVTNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQFS---TADDTFAQYKFSNPWF 112 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 G+ R R GY ++D +L+YAT G Q + + G T G G E + L Sbjct: 113 GTGRGRIGYAMND-VLIYATGGLAFGQLKGQNVFASESHSSAGWTVGAGAEF-AFAPKLS 170 Query: 178 ARLEYRASKYSKVEGF 193 A++EY S F Sbjct: 171 AKVEYLYMSLSTSNFF 186 >gi|316932716|ref|YP_004107698.1| putative outer-membrane immunogenic protein [Rhodopseudomonas palustris DX-1] gi|315600430|gb|ADU42965.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris DX-1] Length = 207 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 23/194 (11%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + + +++ A +AQAAD + V + + GPY G + Y Sbjct: 3 KVTLAAAAMIAAGMSTAQAADMGYYRSNAPYTVNQPLN-------AFSWAGPYLGGNLGY 55 Query: 65 NGSFGEEAHH-----NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG-- 117 +G ++ G + GYN + I++G+EGD++++ AD+ + + Sbjct: 56 --GWGNVTNNITKPSGFSGGLQGGYNWQSGNIVFGLEGDIQFS---TADDTFAPYKFSNP 110 Query: 118 --GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 G+ R R GY ++D +L+YAT G Q A + + G T G G E + Sbjct: 111 WFGTGRGRIGYAMND-VLIYATGGLAFGQLKGQNLAVSESHSSAGWTVGAGAEF-AFAPK 168 Query: 176 LVARLEYRASKYSK 189 L A++EY S Sbjct: 169 LSAKVEYLYMSLST 182 >gi|217977074|ref|YP_002361221.1| porin [Methylocella silvestris BL2] gi|217502450|gb|ACK49859.1| porin [Methylocella silvestris BL2] Length = 254 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 84/251 (33%), Gaps = 59/251 (23%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 L + S A+A +A AAD RA I + G Y G Sbjct: 2 MLRRLLLASVGAVALAGTAFAADLPSRAPPPVYVPPAPI---------FTWTGVYIGGQI 52 Query: 63 LYN-------------GSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 Y G+ G ++ +G G GYN++ S + G+EG V + + Sbjct: 53 GYAWGTQNANFGDSFIGTLGSVSYDTSGVLGGAHVGYNLQLSQFVVGLEGSVDGSSMSKS 112 Query: 108 D----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA----GE 153 + + I GS+R R GY D +LLYAT G A Sbjct: 113 AFLTDEFGNSLTLSAQSNIQGSIRGRVGYAW-DRVLLYATGGVAFAGVKANFYGPFSYDS 171 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF-------------------Y 194 + +G T G G+E ++ + R EYR S + + Sbjct: 172 ASSTRVGWTVGGGLEY-AVTNNWSVRAEYRYSDFGHSTFYPSNYGSVVLTSPFINRHFKE 230 Query: 195 NTISLGVGMKF 205 N + +G KF Sbjct: 231 NQVQVGFSYKF 241 >gi|229620416|gb|ACQ84164.1| Omp31 [Brucella melitensis] Length = 240 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 82/248 (33%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G D + + Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAGTDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E ++ + + EY + K +T+ Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTV 232 Query: 198 SLGVGMKF 205 +G+ KF Sbjct: 233 RVGLNYKF 240 >gi|265984654|ref|ZP_06097389.1| outer membrane protein 31b [Brucella sp. 83/13] gi|264663246|gb|EEZ33507.1| outer membrane protein 31b [Brucella sp. 83/13] Length = 261 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 84/268 (31%), Gaps = 78/268 (29%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++S+A+ SA AAD + + G Y G++A Sbjct: 7 TVMKTALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINA 54 Query: 63 LYNGSFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 Y G + G + AGYN + + I+ G E D + + Sbjct: 55 GYAGGKFKHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGS 114 Query: 103 VPVL---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 + + + G++R R G+ ++ L++Y T G Sbjct: 115 TVKSKLVDNGDLSDVGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLA 174 Query: 142 VAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + + A + + G T G GVE ++ + + EY + K Sbjct: 175 YGKVKTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFN 233 Query: 194 Y----------------NTISLGVGMKF 205 Y +T+ +G+ KF Sbjct: 234 YIDEENVNVNMENKVNFHTVRIGLNYKF 261 >gi|261218682|ref|ZP_05932963.1| outer membrane protein 25b [Brucella ceti M13/05/1] gi|261321820|ref|ZP_05961017.1| outer membrane protein 25b [Brucella ceti M644/93/1] gi|260923771|gb|EEX90339.1| outer membrane protein 25b [Brucella ceti M13/05/1] gi|261294510|gb|EEX98006.1| outer membrane protein 25b [Brucella ceti M644/93/1] Length = 229 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 37/167 (22%) Query: 74 HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLR 121 G ++AGYN + + GV+GD+ Y + + S G++R Sbjct: 65 DGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVR 124 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLS 173 R G + D + Y G + G AG GV+ + Sbjct: 125 ARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-T 182 Query: 174 ESLVARLEYRASKYSKVE---------------GFYNTISLGVGMKF 205 ++++ RLEYR + Y + + I LGV KF Sbjct: 183 DNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF 229 >gi|332717300|ref|YP_004444766.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3] gi|325063985|gb|ADY67675.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3] Length = 219 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 31/184 (16%) Query: 51 HDFNGPYAGLSALYNGSFGEEA-----------HHNAGGSIFAGYNVEDSC-IMYGVEGD 98 + G AG+ A Y + + + A F G+N + + G+E D Sbjct: 38 FSWTGFTAGVQAGYGWNNNDASIVGLPGQTSADFDGALAGGFVGFNYDLGNSWVVGLEAD 97 Query: 99 VRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-ETGKAG 152 +L GS+R R GY D L+Y T G A+ Y E Sbjct: 98 FEKNWGDDSATILGTGFDYGFDWQGSVRGRVGYAF-DRALVYGTAGWAYARGYAEVPGIA 156 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGV 201 ++ G T GVG++ ++ + R+EYR + + + + I +G+ Sbjct: 157 DVKETFNGYTVGVGLDY-AFTDMVFGRVEYRYTDFGDKDFDFGGAAINADVDQHAIRVGL 215 Query: 202 GMKF 205 G+KF Sbjct: 216 GVKF 219 >gi|23502485|ref|NP_698612.1| outer membrane protein Omp31 [Brucella suis 1330] gi|163843871|ref|YP_001628275.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|225628052|ref|ZP_03786088.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|256370036|ref|YP_003107547.1| outer membrane protein Omp31 [Brucella microti CCM 4915] gi|260169279|ref|ZP_05756090.1| outer membrane protein Omp31 [Brucella sp. F5/99] gi|260565895|ref|ZP_05836365.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40] gi|261219740|ref|ZP_05934021.1| outer membrane protein 31b [Brucella ceti M13/05/1] gi|261222753|ref|ZP_05937034.1| outer membrane protein 31b [Brucella ceti B1/94] gi|261315779|ref|ZP_05954976.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10] gi|261318224|ref|ZP_05957421.1| outer membrane protein 31b [Brucella pinnipedialis B2/94] gi|261322630|ref|ZP_05961827.1| outer membrane protein 31b [Brucella ceti M644/93/1] gi|261325677|ref|ZP_05964874.1| outer membrane protein 31b [Brucella neotomae 5K33] gi|261752901|ref|ZP_05996610.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513] gi|261755562|ref|ZP_05999271.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686] gi|261758791|ref|ZP_06002500.1| outer membrane protein 31b [Brucella sp. F5/99] gi|265989255|ref|ZP_06101812.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1] gi|265998716|ref|ZP_06111273.1| outer membrane protein 31b [Brucella ceti M490/95/1] gi|294852932|ref|ZP_06793605.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] gi|23348478|gb|AAN30527.1| outer membrane protein Omp31 [Brucella suis 1330] gi|46251200|gb|AAS84571.1| Omp31b [Brucella neotomae] gi|46251202|gb|AAS84572.1| Omp31b [Brucella pinnipedialis] gi|46251204|gb|AAS84573.1| Omp31b [Brucella ceti] gi|46251206|gb|AAS84574.1| Omp31b [Brucella ceti] gi|46251208|gb|AAS84575.1| Omp31b [Brucella ceti] gi|157310319|emb|CAN43873.1| outer membrane protein 31b [Brucella microti CCM 4915] gi|157310321|emb|CAN43874.1| outer membrane protein 31b [Brucella microti] gi|163674594|gb|ABY38705.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|225617215|gb|EEH14261.1| Porin subfamily protein [Brucella ceti str. Cudo] gi|256000199|gb|ACU48598.1| outer membrane protein Omp31 [Brucella microti CCM 4915] gi|260155413|gb|EEW90493.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40] gi|260921337|gb|EEX87990.1| outer membrane protein 31b [Brucella ceti B1/94] gi|260924829|gb|EEX91397.1| outer membrane protein 31b [Brucella ceti M13/05/1] gi|261295320|gb|EEX98816.1| outer membrane protein 31b [Brucella ceti M644/93/1] gi|261297447|gb|EEY00944.1| outer membrane protein 31b [Brucella pinnipedialis B2/94] gi|261301657|gb|EEY05154.1| outer membrane protein 31b [Brucella neotomae 5K33] gi|261304805|gb|EEY08302.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10] gi|261738775|gb|EEY26771.1| outer membrane protein 31b [Brucella sp. F5/99] gi|261742654|gb|EEY30580.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513] gi|261745315|gb|EEY33241.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686] gi|262553340|gb|EEZ09174.1| outer membrane protein 31b [Brucella ceti M490/95/1] gi|264661452|gb|EEZ31713.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1] gi|294821521|gb|EFG38520.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] Length = 261 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 84/268 (31%), Gaps = 78/268 (29%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++S+A+ SA AAD + + G Y G++A Sbjct: 7 TVMKTALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINA 54 Query: 63 LYNGSFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 Y G + G + AGYN + + ++ G E D + + Sbjct: 55 GYAGGKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGS 114 Query: 103 VPVL---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 + + + G++R R G+ ++ L++Y T G Sbjct: 115 TVKSKLVDNGDLSDIGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLA 174 Query: 142 VAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + + A + + G T G GVE ++ + + EY + K Sbjct: 175 YGKVKTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFN 233 Query: 194 Y----------------NTISLGVGMKF 205 Y +T+ LG+ KF Sbjct: 234 YIDEENVNINMENKVNFHTVRLGLNYKF 261 >gi|62290498|ref|YP_222291.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1 str. 9-941] gi|82700421|ref|YP_414995.1| OmpA-like transmembrane domain-containing protein [Brucella melitensis biovar Abortus 2308] gi|237816005|ref|ZP_04595002.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308 A] gi|260547029|ref|ZP_05822768.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260755331|ref|ZP_05867679.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870] gi|260758554|ref|ZP_05870902.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292] gi|260762376|ref|ZP_05874719.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59] gi|260884349|ref|ZP_05895963.1| Omp31b [Brucella abortus bv. 9 str. C68] gi|261214598|ref|ZP_05928879.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya] gi|297248879|ref|ZP_06932597.1| Omp31b [Brucella abortus bv. 5 str. B3196] gi|46251194|gb|AAS84568.1| Omp31b [Brucella abortus] gi|62196630|gb|AAX74930.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1 str. 9-941] gi|82616522|emb|CAJ11595.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus 2308] gi|237789303|gb|EEP63514.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308 A] gi|260096079|gb|EEW79956.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260668872|gb|EEX55812.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292] gi|260672808|gb|EEX59629.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59] gi|260675439|gb|EEX62260.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870] gi|260873877|gb|EEX80946.1| Omp31b [Brucella abortus bv. 9 str. C68] gi|260916205|gb|EEX83066.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya] gi|297176048|gb|EFH35395.1| Omp31b [Brucella abortus bv. 5 str. B3196] Length = 261 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 83/268 (30%), Gaps = 78/268 (29%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++S+A+ SA AAD + + G Y G++A Sbjct: 7 TVMKTALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINA 54 Query: 63 LYNGSFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDV--- 99 Y G + G + AGYN + + ++ G E D Sbjct: 55 GYAGGKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGS 114 Query: 100 ---------------RYTVPVLADN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 + D + + G++R R G+ ++ L++Y T G Sbjct: 115 TVKSKLVDNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLA 174 Query: 142 VAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + + A + + G T G GVE ++ + + EY + K Sbjct: 175 YGKVKTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFN 233 Query: 194 Y----------------NTISLGVGMKF 205 Y +T+ LG+ KF Sbjct: 234 YIDEENVNINMENKVNFHTVRLGLNYKF 261 >gi|254719645|ref|ZP_05181456.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13] gi|306837721|ref|ZP_07470589.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653] gi|306407177|gb|EFM63388.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653] Length = 253 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 78/264 (29%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++S+A+ SA AAD + + G Y G++A Y G Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106 + G + AGYN + + I+ G E D + + Sbjct: 51 GKFKHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKS 110 Query: 107 ---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + + + G++R R G+ ++ L++Y T G + Sbjct: 111 KLVDNGDLSDVGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170 Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194 + A + + G T G GVE ++ + + EY + K Y Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229 Query: 195 -------------NTISLGVGMKF 205 +T+ +G+ KF Sbjct: 230 ENVNVNMENKVNFHTVRIGLNYKF 253 >gi|326410582|gb|ADZ67646.1| outer membrane protein Omp31 [Brucella melitensis M28] Length = 229 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 76/238 (31%), Gaps = 59/238 (24%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------- 69 SA AAD V PT A + G Y G++A Y G Sbjct: 2 FATSAMAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAGGKFKHPFSSF 52 Query: 70 ------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLA 107 + G + AGYN + D+ ++ G E D + + L Sbjct: 53 DKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLE 112 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAI 159 + G++R R GY ++ L++Y T G + G+ Sbjct: 113 GKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKA 172 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205 G T G G E ++ + + EY + K +T+ +G+ KF Sbjct: 173 GWTLGAGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 229 >gi|158425351|ref|YP_001526643.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans ORS 571] gi|158332240|dbj|BAF89725.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans ORS 571] Length = 233 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 71/208 (34%), Gaps = 43/208 (20%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGS------------FGEEAHHNAGGSIFAGYNV 86 P A V + G Y G +A Y G GYN Sbjct: 28 PVKAPVAPVAPVFSWTGFYIGANAGYGGDKYNYDFGVPTTATASTNSSGFFAGGQIGYNY 87 Query: 87 ED-SCIMYGVEGDVRYTV---------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYA 136 + + ++ G+E D++++ P + NI S G++R R GY D L Y Sbjct: 88 QFANNVVLGLETDLQWSGIDGTLNTVTPGASTNIKSSLDYFGTVRARVGYAF-DRFLPYI 146 Query: 137 TVGPDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 T G + G + + +G T G GVE ++ + + EY+ Sbjct: 147 TGGMAYGKTKTEGSQFSRTGFTTFDDSDTKVGWTIGGGVEY-AITNNWTFKTEYQYVDLG 205 Query: 189 K-----------VEGFYNTISLGVGMKF 205 V+ ++T+ GV KF Sbjct: 206 NSDYGIGTNAVSVDNKFHTVRAGVNYKF 233 >gi|13471933|ref|NP_103500.1| outer membrane protein [Mesorhizobium loti MAFF303099] gi|14022677|dbj|BAB49286.1| outer membrane protein [Mesorhizobium loti MAFF303099] Length = 220 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 40/216 (18%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + LA+ S LA+ AAD V P A + G Y G+ A Sbjct: 1 MKLALLCSVAFLAAASPVLAADIVE----------PVAAMP------FSWTGFYGGVQAG 44 Query: 64 -------YNGSFGEEAHHNAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPV-------- 105 ++G+ + + N G IF G YN + + + G+EGD+ + Sbjct: 45 GGWNDSRWSGATFDSFNTNGSGGIFGGQIGYNYQINQFVIGIEGDLAGSTVKGDGQCSTA 104 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI----AIGG 161 L + GS+R R GY + D +L+Y G + G +G Sbjct: 105 LGTTCETKQDYLGSVRGRLGYAI-DRILIYGDAGVAFTKYKIAEVDGFHQSFGGGSRVGW 163 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197 TAG+G E L++ A +E+ + G +TI Sbjct: 164 TAGLGAEY-ALTDHWTAGVEWNYYDFGTKSGESDTI 198 >gi|254702337|ref|ZP_05164165.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str. 513] gi|254704867|ref|ZP_05166695.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str. 686] gi|254708278|ref|ZP_05170106.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis M163/99/10] gi|254710652|ref|ZP_05172463.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis B2/94] gi|254714835|ref|ZP_05176646.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1] gi|254717892|ref|ZP_05179703.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1] gi|256032146|ref|ZP_05445760.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis M292/94/1] gi|256061667|ref|ZP_05451806.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33] gi|256160342|ref|ZP_05458035.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1] gi|256255546|ref|ZP_05461082.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94] Length = 253 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 78/264 (29%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++S+A+ SA AAD + + G Y G++A Y G Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106 + G + AGYN + + ++ G E D + + Sbjct: 51 GKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKS 110 Query: 107 ---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + + + G++R R G+ ++ L++Y T G + Sbjct: 111 KLVDNGDLSDIGVAGNLSGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170 Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194 + A + + G T G GVE ++ + + EY + K Y Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229 Query: 195 -------------NTISLGVGMKF 205 +T+ LG+ KF Sbjct: 230 ENVNINMENKVNFHTVRLGLNYKF 253 >gi|319957414|ref|YP_004168677.1| porin [Nitratifractor salsuginis DSM 16511] gi|319419818|gb|ADV46928.1| porin [Nitratifractor salsuginis DSM 16511] Length = 220 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 53/239 (22%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ ++ +++AL+SF A G +VP ++G Y GL Sbjct: 1 MRRVIFSL-TTAVALSSFAMA------------GGDIVPVAPAPAD-----SWSGFYVGL 42 Query: 61 SALYNGSFGEE-----------AHHNAGGSIFAGYNVE-DSCIMYGVE--------GDVR 100 A + GG ++AGYN ++ + G+E D Sbjct: 43 QAGGIWGNADVNIPAYPSNFSLDPDGFGGGVYAGYNWLLENDFLIGLEVAGNFISADDEG 102 Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITP 156 + + + ++ +R G + D+ + Y T G + + G G Sbjct: 103 LSGGMGGEKYKVEQNWDAAILLRIGKVIDDTWMPYVTGGVAWTELETSYIPDGGWGSKKD 162 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKY----------SKVEGFYNTISLGVGMKF 205 G T G GVE L+ ++ AR+EYR + Y S V+ N + +G+ +F Sbjct: 163 TVNGWTIGAGVE-MKLTTNIHARIEYRYTDYDTAQFVHAGPSNVDYNDNRVMVGISYRF 220 >gi|260466903|ref|ZP_05813086.1| porin [Mesorhizobium opportunistum WSM2075] gi|259029299|gb|EEW30592.1| porin [Mesorhizobium opportunistum WSM2075] Length = 234 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 81/252 (32%), Gaps = 68/252 (26%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + + L A AAD + G +D++G YAG+ A Sbjct: 1 MKTLLLATVFILGPVGMACAADINEVSPVAG----------------YDWSGLYAGVDAG 44 Query: 64 YNGSFGEE-----------------AHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPV 105 Y G I G N + + + G E D+ Y+ Sbjct: 45 YAAGKSNLFIAGGGFGGGSDLNVPLDPDGFVGGIHIGTNYQMANNFVIGAEADIAYSNAD 104 Query: 106 LADNIHSLHG-----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GK 150 + + G GS R+R GY D L Y T G A+ T G Sbjct: 105 GLTPVDTGGGGVTTLLKSELKWQGSARLRAGYAF-DRTLPYITAGVAAAKYEVTAISAGP 163 Query: 151 AGE---ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS--------------KVEGF 193 GE +G T G G+E ++ +AR EYR S + V+ Sbjct: 164 GGEIPFHDESHVGWTVGAGIE-HAFTDRWIARAEYRYSDFGSQDLSLAAGLPTVTSVDLQ 222 Query: 194 YNTISLGVGMKF 205 + + +G+ KF Sbjct: 223 THDVRVGLSYKF 234 >gi|240850131|ref|YP_002971524.1| hemin binding protein D [Bartonella grahamii as4aup] gi|240267254|gb|ACS50842.1| hemin binding protein D [Bartonella grahamii as4aup] Length = 272 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 83/279 (29%), Gaps = 92/279 (32%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--- 63 V S +L S QAAD V P + G Y G Sbjct: 6 LVSTSIFSLISISVVQAADMV----------TPEQPVPVIAAPAFSWTGFYLGGQIGSFS 55 Query: 64 --------------YNGSFGEEAHHNAG--GSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106 +N E+ +G G ++AG N++ + G++ D+ ++ Sbjct: 56 GKTTASYLKDETGIWNPIGKEDLPKLSGFIGGVYAGSNIDIDNGFIIGIDTDIMWSDKKG 115 Query: 107 ADNIHS------------------------------------LHGIGGSLRIRGGYEVSD 130 +I+ G+ R++ G+ + Sbjct: 116 TKDINRPKKSQTEEASSEETNLTRDSHEEDSTIPIEAVRHTLKQKWAGATRVKVGFAIE- 174 Query: 131 SLLLYATVGPDVAQKYETGKAG---------------EITPIAIGGTAGVGVEVGGLSES 175 ++ Y + G Q + IG T G GV+ ++++ Sbjct: 175 RVMPYVSGGIAYTQLQNIFGLVADSNNRAVNFSDWLHDEKKTMIGYTLGGGVDF-AMTDN 233 Query: 176 LVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205 ++ R EYR S + K + + N +GV KF Sbjct: 234 VIVRAEYRYSDFGKKKFVHDKFEMGYKTNDFRVGVAYKF 272 >gi|110634908|ref|YP_675116.1| hypothetical protein Meso_2567 [Mesorhizobium sp. BNC1] gi|110285892|gb|ABG63951.1| outer membrane protein, hypothetical [Chelativorans sp. BNC1] Length = 234 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 44/240 (18%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + ++ + L + AAD + + +D++G Y G+ Sbjct: 1 MRSILSLAFIGLFGTSAGFAADAIIQRDDPVPVAP----VVAAPAKSYDWSGIYLGVDGG 56 Query: 64 YNGS----------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 Y + ++ G ++ GYN + + G EGD + Sbjct: 57 YKWNSLKFDPNSVAKKAGIKGDAFKMNSTFGGVYLGYNYQIDNWVIGAEGDAQLYFGGKD 116 Query: 108 DNIHSLHGI------GGSLRIRGGYEVSDSLLLYATVGPD-----VAQKYETGKAGEITP 156 S +G GS R+R GY + D L Y T G ++ K + Sbjct: 117 KAAASGNGRFAASRGFGSARVRLGYAM-DRFLPYVTGGAAFENLEISSKKDGKVVARDNK 175 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 +G T G G++ ++E + ++EY+ + K +T+ +G+ KF Sbjct: 176 TRVGYTLGAGLDY-AITEKWIGKVEYQFMDFGKKSYDLDIGSADLSSHSHTMRVGLSYKF 234 >gi|306843011|ref|ZP_07475638.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2] gi|306844622|ref|ZP_07477209.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1] gi|306275066|gb|EFM56829.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1] gi|306286803|gb|EFM58344.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2] Length = 253 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 78/264 (29%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++S+A+ SA AAD + + G Y G++A Y G Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106 + G + AGYN + + I+ G E D + + Sbjct: 51 GKFKHPFSGVEQDGGEDFSGSLDVTGSGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKS 110 Query: 107 ---------------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + + + G++R R G+ ++ L++Y T G + Sbjct: 111 KLVDKGDLSDIGVAGNLDGDESFGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170 Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194 + A + + G T G GVE ++ + + EY + K Y Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229 Query: 195 -------------NTISLGVGMKF 205 +T+ +G+ KF Sbjct: 230 ENVNVNMENKVNFHTVRIGLNYKF 253 >gi|189024724|ref|YP_001935492.1| OmpA-like transmembrane domain protein [Brucella abortus S19] gi|254689800|ref|ZP_05153054.1| OmpA-like transmembrane domain-containing protein [Brucella abortus bv. 6 str. 870] gi|254694291|ref|ZP_05156119.1| OmpA-like transmembrane domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|254697943|ref|ZP_05159771.1| OmpA-like transmembrane domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730834|ref|ZP_05189412.1| OmpA-like transmembrane domain-containing protein [Brucella abortus bv. 4 str. 292] gi|256258053|ref|ZP_05463589.1| OmpA-like transmembrane domain-containing protein [Brucella abortus bv. 9 str. C68] gi|189020296|gb|ACD73018.1| OmpA-like transmembrane domain protein [Brucella abortus S19] Length = 253 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 82/264 (31%), Gaps = 78/264 (29%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++S+A+ SA AAD + + G Y G++A Y G Sbjct: 3 TALLASVAMLFTSSAMAADIIVAE---------PAPVAVDT---FSWTGGYIGINAGYAG 50 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDV------- 99 + G + AGYN + + ++ G E D Sbjct: 51 GKFKHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKS 110 Query: 100 -----------RYTVPVLADN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + D + + G++R R G+ ++ L++Y T G + Sbjct: 111 KLVDNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKV 170 Query: 146 YETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--- 194 + A + + G T G GVE ++ + + EY + K Y Sbjct: 171 KTSLSAYDDGESFSAGNSKTKAGWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDE 229 Query: 195 -------------NTISLGVGMKF 205 +T+ LG+ KF Sbjct: 230 ENVNINMENKVNFHTVRLGLNYKF 253 >gi|302319025|gb|ADL14702.1| outer membrane protein 31 [Brucella melitensis] Length = 240 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 80/248 (32%), Gaps = 59/248 (23%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 +V ++S+A SA AAD V PT+A + G Y G++A Y G Sbjct: 3 SVILASIAAMFATSAMAADVVVSEPSA-----PTVAPVD----TFSWTGGYIGINAGYAG 53 Query: 67 SFG-------------------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---- 102 + G + AGYN + D+ ++ G E D + + Sbjct: 54 GKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTG 113 Query: 103 -----VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--- 154 L + G++R R GY ++ L++Y T G + G+ Sbjct: 114 SISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASA 173 Query: 155 -----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTI 197 G T G G E + + + EY K +T Sbjct: 174 LHTWSDKTKAGWTLGAGAEY-AFNNNWTLKSEYLYPYLGKRNLVDVDNSFLESKVNFHTD 232 Query: 198 SLGVGMKF 205 G+ KF Sbjct: 233 RFGLNYKF 240 >gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2] gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2] Length = 255 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 77/223 (34%), Gaps = 43/223 (19%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 L + S A+A +A AAD RA I + G Y G Sbjct: 1 MLRRVLLASVGAIALAGTALAADLPSRAPPPVYVPPAPI---------FTWTGVYIGGQI 51 Query: 63 LYNGSFGE--------------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT------ 102 Y G + + G GYN++ + + G+EG V T Sbjct: 52 GYAWGNGSANFGDANGNFVNFGNSGNGVIGGAHVGYNLQLNQFVVGLEGSVDGTSLSKTY 111 Query: 103 --------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA--- 151 V N+H+ I GS+R R GY D +L+YAT G A + Sbjct: 112 SGTAFVPGFGVAGINLHTSADIQGSIRGRVGYAW-DRVLVYATGGVAFAGVKASLSTPFS 170 Query: 152 -GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + +G T G G+E ++ + R EYR S + + Sbjct: 171 YDSSSTTKVGWTVGGGLEY-AVTNNWSIRAEYRYSNFGNATLY 212 >gi|306840766|ref|ZP_07473513.1| outer membrane protein Omp31 [Brucella sp. BO2] gi|306289161|gb|EFM60410.1| outer membrane protein Omp31 [Brucella sp. BO2] Length = 223 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 74/233 (31%), Gaps = 59/233 (25%) Query: 22 QAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------------ 69 AAD V P+ T V + G Y G++A Y G Sbjct: 1 MAADVVVSE--------PSAPTTAPVDT-FSWTGGYIGINAGYAGGKFKHPFSAFDTDDN 51 Query: 70 -------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHS 112 G + AGYN + D+ ++ G E D + + L + Sbjct: 52 ERVSGSLNITSGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISADAGGLEGKAET 111 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAG 164 G++R R GY ++ L++Y T G + G+ G T G Sbjct: 112 KVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDVSALHTWSDKTKAGWTLG 171 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205 G E ++ + + EY + K +T+ +G+ KF Sbjct: 172 AGAEY-AINNNWTLKSEYLYTDLGKRNLIDVDDSFLESKVNFHTVRVGLNYKF 223 >gi|319403668|emb|CBI77253.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498] Length = 262 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 88/268 (32%), Gaps = 74/268 (27%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S QAAD ++ VP I+++ + G Y G Sbjct: 3 IKHLLVACSWTFIPVSMVQAADIMKPHQSQSYQPVPVISSSN----NFSWTGFYVGAQIG 58 Query: 64 YNGSFGEEAHH------------------------NAGGSIFAGYNVE-DSCIMYGVEGD 98 G GE G I+AG N ++ G++ D Sbjct: 59 --GFSGEATLSPIQDSVEEDREGQGFSEIKSPKLSGFIGGIYAGSNFSLSKDLILGIDTD 116 Query: 99 VRYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--- 146 + ++ ++ G++R+R G+ + D ++ Y + G Q Sbjct: 117 MVWSGKKNTKVFDVQDMSIDMSIKEKWAGAMRMRVGFAM-DRVMPYVSGGVSYVQLQNVF 175 Query: 147 --------------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 K + T I +G + G GV+V ++++++ R EYR S Sbjct: 176 TAKRLAKAVVRERRNTLPSDSEPKFLDETKILVGYSVGGGVDV-AMTDNVIMRAEYRYSD 234 Query: 187 YSKVEGFYNTI---------SLGVGMKF 205 + K + + + +GV KF Sbjct: 235 FGKKKFAKDNVDLSYKTNDFRVGVAYKF 262 >gi|91975762|ref|YP_568421.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] gi|91682218|gb|ABE38520.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] Length = 207 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 16/149 (10%) Query: 50 RHDFNGPYAGLSALYNGSFGEEAHH-----NAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104 + GPY G + Y+ FG + G + GYN + I++G+EGD++++ Sbjct: 41 AFSWAGPYLGGNLGYS--FGNVTNSITKPSGFNGGVQGGYNWQSGNIVFGLEGDIQFS-- 96 Query: 105 VLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 AD+ + + G+ R R GY ++D LL+YAT G Q + + G Sbjct: 97 -TADDTFAPYKFSNPWFGTARGRVGYAMND-LLIYATGGFAFGQLKGERLLSTESHSSAG 154 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSK 189 T G G E + L A++EY S Sbjct: 155 WTVGAGAEF-AFAPKLSAKVEYLYGSLST 182 >gi|13470965|ref|NP_102534.1| outer membrane protein [Mesorhizobium loti MAFF303099] gi|14021708|dbj|BAB48320.1| outer membrane protein [Mesorhizobium loti MAFF303099] Length = 226 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 65/206 (31%), Gaps = 44/206 (21%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEA----------------HHNAGGSIFAGYN 85 A + HD++G Y G Y + G + GYN Sbjct: 23 AISAEPATAHDWSGVYVGGQIGYGFGKTDATYNLPNTPTIRGSQDYDTDGFLGGVQIGYN 82 Query: 86 VEDSCIMYGVEGDVRYTVPV---------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYA 136 + + + GVE DV L D + G+LR R GY D L+Y Sbjct: 83 YQINSAVLGVEADVSGADIKGHSDEITSGLGDRYDTKVDWFGTLRARAGYAF-DRTLIYG 141 Query: 137 TVGPDVAQKYETGKAG-----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV- 190 T G G +G T G G+E +++ A+ EY+ Sbjct: 142 TGGLAFGSVENRYVDGPFDTFSEKNTKVGWTIGAGLE-QAITDHWSAKFEYQYVDLRDQT 200 Query: 191 -----------EGFYNTISLGVGMKF 205 + +N + +G+ KF Sbjct: 201 IDYAPNSNTTFDNTFNAVKIGMNYKF 226 >gi|319408049|emb|CBI81703.1| Hemin binding protein C [Bartonella schoenbuchensis R1] Length = 274 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 87/281 (30%), Gaps = 88/281 (31%) Query: 4 LFLAVGVSSLALASFCSAQAAD-PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + S AL S +AQAAD PV+ T+ V + G Y G Sbjct: 3 MKCVITASIFALVSASAAQAADMPVQERPT-------TVLPQVVVAPAFSWTGFYLGGQI 55 Query: 63 L-------YNGSFGEEAH-----------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV 103 + + G+ G ++AG NV+ + GV+ D+ ++ Sbjct: 56 GGFSSNSSWVRTSGDIQGILGHNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWSG 115 Query: 104 PVL---------------------------------------ADNIHSLHGIGGSLRIRG 124 +++ G+ R+R Sbjct: 116 AKAKASRSSLRTGNGARLAARAGVSTRAPALFEGTDNNASRVTESVTFSDKWSGATRVRL 175 Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAG-----------EITPIAIGGTAGVGVEVGGLS 173 G+ D ++ Y G +Q + +G T G GV+ ++ Sbjct: 176 GFAF-DRIMPYVAGGIAYSQIKAVVAEERQGVETVIEQLSGSKTLVGYTLGAGVDF-AMT 233 Query: 174 ESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 +S++ R EYR S + K + N +GV KF Sbjct: 234 DSVILRAEYRYSDFGKKSFISNNAEIDLKTNDFRVGVAYKF 274 >gi|222082486|ref|YP_002541851.1| outer membrane protein [Agrobacterium radiobacter K84] gi|221727165|gb|ACM30254.1| outer membrane protein [Agrobacterium radiobacter K84] Length = 230 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 74/239 (30%), Gaps = 50/239 (20%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA-- 62 L A +A AD P A + G Y GL+ Sbjct: 4 VLGSAAFLFAFGMASAAYTADL--------SVSTPPAAPMEQ--PVFTWTGFYVGLNGGG 53 Query: 63 --------------LYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV---RYTVP 104 + G FG+ G GYN + D + G+E D Sbjct: 54 AFGGDDKFGLHSGDTFLGKFGKIEGSGFFGGGQIGYNYQVDPNWVIGLEADFQGANIHDS 113 Query: 105 VLADNIH--SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITPI 157 V D H S G+LR R GY D+ L Y T G G Sbjct: 114 VTNDGAHGSSKINWFGTLRPRVGYAY-DNTLFYGTGGLAYGHIDYKGSLDGVGSFSEDKT 172 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205 G G GVE ++++ A+LEY+ + K +++I +GV KF Sbjct: 173 KAGWVLGAGVE-HAFTDNVTAKLEYQYVDFGSFTAGGDALSSKATADFHSIRVGVNYKF 230 >gi|240849915|ref|YP_002971304.1| hemin binding protein C [Bartonella grahamii as4aup] gi|240267038|gb|ACS50626.1| hemin binding protein C [Bartonella grahamii as4aup] Length = 277 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 88/289 (30%), Gaps = 98/289 (33%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L A S+ A S +AQAAD + PT V + G Y G Sbjct: 3 MKWLITA---SAFAFVSVSAAQAADVI-------VPPSPTPVAPVIVAPTFSWTGFYLGG 52 Query: 61 SALYNGSFGEEAHH-------------------NAGGSIFAGYNVEDSC-IMYGVEGDVR 100 G G+ G ++AG NV+ ++ GV+ D+ Sbjct: 53 QLG--GFSGKTKMDILSNGKKIPAPDDLLPKLSGFMGGLYAGSNVDLGNGLILGVDTDIM 110 Query: 101 YT--VPVLADNIHS-------------------------------------LHGIGGSLR 121 ++ N + G+ R Sbjct: 111 WSNKDDTKTGNTYVILPDHINYIKKILTESGINIGKDALEAGAKRTHSFTFKEKWAGATR 170 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGV 165 +R G+ ++ ++ Y G Q + +G + T +G T G Sbjct: 171 VRIGFA-AERIMPYVAGGIAYTQLQDTASISITGKDSDKVIASGTLSDETKTLVGYTLGA 229 Query: 166 GVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 GV+ ++ +++ R EYR S + K N +GV KF Sbjct: 230 GVD-LAMTNNVIVRAEYRYSDFGKKKFSNDKYETSYKTNDFRVGVAYKF 277 >gi|17989189|ref|NP_541822.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|17985044|gb|AAL54086.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 219 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 71/216 (32%), Gaps = 51/216 (23%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------------------EEAHHNAGGS 79 P+ T V + G Y G++A Y G + G Sbjct: 6 PSAPTAAPVDT-FSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGG 64 Query: 80 IFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHSLHGIGGSLRIRGGYEVS 129 + AGYN + D+ ++ G E D + + L + G++R R GY + Sbjct: 65 VQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTAT 124 Query: 130 DSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLE 181 + L++Y T G + G+ G T G G E ++ + + E Sbjct: 125 ERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKAGWTLGAGAEY-AINNNWTLKSE 183 Query: 182 YRASKYSKVEGFY------------NTISLGVGMKF 205 Y + K +T+ +G+ KF Sbjct: 184 YLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 219 >gi|260545348|ref|ZP_05821089.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC 8038] gi|260754712|ref|ZP_05867060.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 6 str. 870] gi|260757935|ref|ZP_05870283.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 4 str. 292] gi|260761758|ref|ZP_05874101.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 2 str. 86/8/59] gi|260883735|ref|ZP_05895349.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 9 str. C68] gi|260096755|gb|EEW80630.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC 8038] gi|260668253|gb|EEX55193.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 4 str. 292] gi|260672190|gb|EEX59011.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 2 str. 86/8/59] gi|260674820|gb|EEX61641.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 6 str. 870] gi|260873263|gb|EEX80332.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus bv. 9 str. C68] Length = 173 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 37/167 (22%) Query: 74 HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLR 121 G ++AGYN + + GV+GD+ Y + + S G++R Sbjct: 9 DGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVR 68 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLS 173 R G + D + Y G + G AG GV+ + Sbjct: 69 ARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKTMTGWAAGAGVDYAA-T 126 Query: 174 ESLVARLEYRASKYSKVE---------------GFYNTISLGVGMKF 205 ++++ RLEYR + Y + + I LGV KF Sbjct: 127 DNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF 173 >gi|294853764|ref|ZP_06794436.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] gi|294819419|gb|EFG36419.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026] gi|326553873|gb|ADZ88512.1| outer membrane protein Omp31 [Brucella melitensis M5-90] Length = 223 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 74/233 (31%), Gaps = 59/233 (25%) Query: 22 QAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------------ 69 AAD V PT A + G Y G++A Y G Sbjct: 1 MAADVVVSEPSA-----PTAAPVD----TFSWTGGYIGINAGYAGGKFKHPFSSFDKEDN 51 Query: 70 -------EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHS 112 + G + AGYN + D+ ++ G E D + + L + Sbjct: 52 EQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAET 111 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAG 164 G++R R GY ++ L++Y T G + G+ G T G Sbjct: 112 KVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKAGWTLG 171 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205 G E ++ + + EY + K +T+ +G+ KF Sbjct: 172 AGAEY-AINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 223 >gi|289467881|gb|ADC95625.1| 31kDa outer membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. M5] Length = 219 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 71/216 (32%), Gaps = 51/216 (23%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------------------EEAHHNAGGS 79 P+ T V + G Y G++A Y G + G Sbjct: 6 PSAPTAAPVDT-FSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGG 64 Query: 80 IFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHSLHGIGGSLRIRGGYEVS 129 + AGYN + D+ ++ G E D + + L + G++R R GY + Sbjct: 65 VQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTAT 124 Query: 130 DSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLE 181 + L++Y T G + G+ G T G G E ++ + + E Sbjct: 125 ERLMVYGTGGLAYGKVKSAFNLGDDAGALHTWSDKTKAGWTLGAGAEY-AINNNWTLKSE 183 Query: 182 YRASKYSKVEGFY------------NTISLGVGMKF 205 Y + K +T+ +G+ KF Sbjct: 184 YLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 219 >gi|319782584|ref|YP_004142060.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168472|gb|ADV12010.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 242 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 83/255 (32%), Gaps = 70/255 (27%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + + +++ LA A AAD + +D++G YAG+ Sbjct: 6 TMKILLLATAIILAPAGMACAADIAETSPT----------------SAYDWSGLYAGVDI 49 Query: 63 LYN----------GSFGEEAHHNAG-------GSIFAGYNVE-DSCIMYGVEGDVRY--- 101 Y G G N G G + G N + ++ + G E D+ Y Sbjct: 50 GYAAGKSNLFIAGGGLGGATDLNVGVDPNGFIGGVHIGANYQMENSFVIGAEADIAYGNI 109 Query: 102 ---------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ---KYETG 149 + + S GS R+R GY D L Y T G A+ + Sbjct: 110 DGLTALDAGGGGGVTTLLKSELKWSGSARLRAGYAF-DRTLPYITAGVAAAKYELIAVSA 168 Query: 150 KAGEITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSK--------------V 190 +G T G G+E ++ +AR EYR S + V Sbjct: 169 GGPAAEVTLHSDSHVGWTVGAGIE-HAFTDRWIARAEYRYSDFGSQDLSVAAGLPTETHV 227 Query: 191 EGFYNTISLGVGMKF 205 + I +G+ KF Sbjct: 228 DLQTQDIRVGLSYKF 242 >gi|254696546|ref|ZP_05158374.1| outer membrane protein, putative [Brucella abortus bv. 2 str. 86/8/59] gi|254705298|ref|ZP_05167126.1| outer membrane protein, putative [Brucella suis bv. 3 str. 686] gi|260760923|ref|ZP_05873266.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|261756008|ref|ZP_05999717.1| outer membrane protein [Brucella suis bv. 3 str. 686] gi|260671355|gb|EEX58176.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|261745761|gb|EEY33687.1| outer membrane protein [Brucella suis bv. 3 str. 686] Length = 158 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 29/159 (18%) Query: 74 HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI-----------HSLHGIGGSLR 121 + G ++ GYN + + G++ +V Y + + + G++R Sbjct: 2 NGFIGGLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVR 61 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 R GY + D + Y G + G+ + G T G G++ +++++ Sbjct: 62 ARAGYAI-DRFMPYIAGGVAFGGIKNSLRIGGEESSKSKTQTGWTVGAGIDYAA-TDNVL 119 Query: 178 ARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 RLEYR + Y K N I LGV KF Sbjct: 120 LRLEYRYTDYGKKNFGLNDLDTRGSFKTNDIRLGVAYKF 158 >gi|182679250|ref|YP_001833396.1| porin [Beijerinckia indica subsp. indica ATCC 9039] gi|182635133|gb|ACB95907.1| porin [Beijerinckia indica subsp. indica ATCC 9039] Length = 250 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 64/200 (32%), Gaps = 47/200 (23%) Query: 51 HDFNGPYAGLSALYNGS----------------FGEEAHHNAGGSIFAGYNVE------- 87 + G Y G Y FG + G GYN + Sbjct: 40 FTWTGVYVGGDIGYAWGNTSYNSQIFSAPARFAFGSYSPDGVTGGAHVGYNFQAGPSFIG 99 Query: 88 DSCIMYGVEGDV---RYTVPVLADNIH---SLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 + G+EGDV Y+ V+ S I GS+R R G D L+YAT G Sbjct: 100 TGNFVIGIEGDVQGSNYSKSVVGFANDIYTSKLDITGSIRGRLGIAF-DRALIYATGGAA 158 Query: 142 VAQKYE-----TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF--- 193 G A+G T G G+E ++ + R +Y S Y F Sbjct: 159 FGGITNQLQLRNGAFFSNDRTAVGWTVGGGIEY-AVTNNWSVRAQYLYSDYGHTNSFFPN 217 Query: 194 --------YNTISLGVGMKF 205 N +++G KF Sbjct: 218 AQVHKHDTQNKVTVGFSYKF 237 >gi|254504423|ref|ZP_05116574.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii DFL-11] gi|222440494|gb|EEE47173.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii DFL-11] Length = 221 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 78/220 (35%), Gaps = 29/220 (13%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH-DFNGPYAGLSALYN------ 65 LALA F +A A + D+ G Y G + Sbjct: 4 LALAGFALTASAAGALAADLPQSPAPAPAYDAVPAGQQSIDWTGFYVGTQLGWAFGNFDN 63 Query: 66 ---GSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH-----SLHGI 116 G+ +++ GG +AGYN + ++ G+E D T + ++ S Sbjct: 64 STGGASSSFSNNGVGGGAYAGYNFQVTPNVVVGLESDFSLTDLEKSGTVNGLSLKSSSDW 123 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 + R R GY D ++Y G +A T + A+G T G G E +++++ Sbjct: 124 NANFRGRLGYAF-DRYMIYGAGGLAIADLEATANGVSDSKTALGWTLGAGAEA-AITQNV 181 Query: 177 VARLEYRASKYSKVE-----------GFYNTISLGVGMKF 205 VAR +Y + + + + G+ KF Sbjct: 182 VARFDYSYQDFGDQDFNLGGTGVSTEFNDHQVRAGIAYKF 221 >gi|319408047|emb|CBI81701.1| Hemin binding protein C [Bartonella schoenbuchensis R1] Length = 289 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 87/296 (29%), Gaps = 103/296 (34%) Query: 4 LFLAVGVSSLALASFCSAQAAD-PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + S AL S +AQAAD PV+ T+ V + G Y G Sbjct: 3 MKCVITASIFALVSASAAQAADMPVQERPT-------TVLPQVVVAPAFSWTGFYLGGQI 55 Query: 63 L-----------YNGSFGEEAH-----------HNAGGSIFAGYNVEDSC-IMYGVEGDV 99 Y G + G ++AG NV+ + GV+ D+ Sbjct: 56 GGFSSNSSSKRIYQGVSKGKEDILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDI 115 Query: 100 RYTVPVL-----------------------------------------ADNIHSLHGIGG 118 ++ N+ G Sbjct: 116 VWSGDKAKTSKSYDLPQTSDVQEVATRAEVSTGVPTLVEGADNNASRVTRNVTFSDKWSG 175 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK--------------------AGEITPIA 158 + R+R G D ++ Y G +Q + + + Sbjct: 176 ATRVRLGAAF-DRIMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEGLSDSKTM 234 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205 +G T G GV+ ++++++ R EYR S + K V+ N +GV KF Sbjct: 235 VGYTLGAGVDF-AMTDTVMLRAEYRYSDFGKKTFVKDKVEVDLKTNDFRVGVAYKF 289 >gi|296448558|ref|ZP_06890432.1| TonB-dependent receptor [Methylosinus trichosporium OB3b] gi|296253924|gb|EFH01077.1| TonB-dependent receptor [Methylosinus trichosporium OB3b] Length = 482 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 68/204 (33%), Gaps = 35/204 (17%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 + A+ A A + + + P R+D+ G Y G + Sbjct: 254 AKFPSAAGAPAFLASALPSSDLPSKKGPPG--------SRYDWRGVYVGFDVGHAWGHDR 305 Query: 71 EAHH---------------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA------DN 109 + G + AGYN + + ++ GVE + T Sbjct: 306 FVPYYSVPNVGAPQSFDLTGVIGGLHAGYNWQLASVVLGVETEFDATSLNRTVQQDAVTT 365 Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKY--ETGKAGEITPIAIGGTAGV 165 + S + GS+R R G+ D LL++ T G Q G + G Sbjct: 366 LRSSSALQGSIRARFGWAF-DRLLVFGTGGSQWAGVQNAYHIRGLGDSYSTNHHSWVVGG 424 Query: 166 GVEVGGLSESLVARLEYRASKYSK 189 G+E L++ + R EYR S + K Sbjct: 425 GIEY-ALTDHWLGRAEYRFSDFGK 447 >gi|49473903|ref|YP_031945.1| hemin binding protein c [Bartonella quintana str. Toulouse] gi|21689903|gb|AAM68128.1| hemin-binding protein C [Bartonella quintana] gi|49239406|emb|CAF25744.1| Hemin binding protein c [Bartonella quintana str. Toulouse] Length = 277 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 83/287 (28%), Gaps = 94/287 (32%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L A S+ A S + QAAD V P V + G Y G Sbjct: 3 MKWLITA---SAFAFVSASTVQAADVV-----VPPRSTPIAPVI--VAPTFSWTGFYIGG 52 Query: 61 SAL-----------YNGSFGEEAHH------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 NG G I+ G NV+ ++ GV+ D+ ++ Sbjct: 53 QIGGFSSKTKMNILANGKTFPVKDDLLPKLSGFMGGIYVGSNVDLGNGLILGVDTDIIWS 112 Query: 103 VPVLADNIHS---------------------------------------LHGIGGSLRIR 123 G+ R+R Sbjct: 113 DKKYTKTGKVYEITEQHIPYIKKMLTEAGIAISNNDLKPGAKRVHSFTFKEKWAGATRVR 172 Query: 124 GGYEVSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGVGV 167 G+ ++ ++ Y G Q + +G + T +G T G GV Sbjct: 173 IGFA-AERIMPYVAGGIAYTQLQDIGSISIKNKDSSKVIASGNLSDETKTFVGYTLGAGV 231 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205 + ++ ++V R EYR S + K + N +GV KF Sbjct: 232 D-LAMTNNVVVRAEYRYSDFGKKKFTKGQLETSYKTNDFRVGVAYKF 277 >gi|49475067|ref|YP_033108.1| hemin binding protein a [Bartonella henselae str. Houston-1] gi|2150037|gb|AAC39274.1| Pap31 [Bartonella henselae phage 60457] gi|49237872|emb|CAF27068.1| Hemin binding protein a [Bartonella henselae str. Houston-1] Length = 279 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 86/287 (29%), Gaps = 95/287 (33%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S +AL S +AQAAD + V +A + G Y G Sbjct: 3 IKSLMTTSVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVG 53 Query: 64 YNGSFGEEAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV--- 103 S E G I+AG N++ ++ GVE D + Sbjct: 54 NFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADRED 113 Query: 104 ----------------------------------------PVLADNIHSLHGIGGSLRIR 123 D++ G+ R+R Sbjct: 114 AKTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVR 173 Query: 124 GGYEVSDSLLLYATVGP------DVAQKYETGKAGE----------ITPIAIGGTAGVGV 167 G+ +D ++ Y G V+ T A + T +G T G GV Sbjct: 174 IGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGV 233 Query: 168 EVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 + ++++++ R EYR S + K N +GV KF Sbjct: 234 DF-AMTDNVLLRAEYRYSDFGKKKFEKEGSEFSYKTNDFRVGVAYKF 279 >gi|312112850|ref|YP_004010446.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311217979|gb|ADP69347.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100] Length = 233 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 21/201 (10%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 + L+LA+ +++ + A AAD R P I + G Y G++ Sbjct: 7 RSLYLAIIGAAVTVPL--GANAADMYRAPAPTTYAPPPPIVQPN------TWAGFYVGIN 58 Query: 62 ALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDV---RYTVPVLADNIHSLH 114 Y +++ G GYN + +YG+E D+ R T Sbjct: 59 GGYGWGASDDSTRGDVNGGFGGGQIGYNFQSGNFVYGLETDLQAGRITGKSDDYASKETT 118 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE----ITPIAIGGTAGVGVEVG 170 G+LR R GY ++ LLY T G + + G TAG G+E Sbjct: 119 DWFGTLRGRLGYAFGNT-LLYGTGGFAYGGVNQKMNYADVLFSNDDTRTGWTAGAGIEY- 176 Query: 171 GLSESLVARLEYRASKYSKVE 191 +S + + EY+ + K + Sbjct: 177 KVSGNWSLKGEYQYVDFGKED 197 >gi|163867545|ref|YP_001608744.1| hemin binding protein C [Bartonella tribocorum CIP 105476] gi|161017191|emb|CAK00749.1| hemin binding protein C [Bartonella tribocorum CIP 105476] Length = 277 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 87/289 (30%), Gaps = 98/289 (33%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L A S+ A S +AQAAD + PT V + G Y G Sbjct: 3 MKWLITA---SAFAFVSVSAAQAADVI-------VPPSPTPVAPVIVAPTFSWTGFYFGG 52 Query: 61 SALYNGSFGEEAHH-------------------NAGGSIFAGYNVEDSC-IMYGVEGDVR 100 G G+ G ++AG N++ ++ GV+ D+ Sbjct: 53 QIG--GFSGKTKMDILAKGQKIPVSDDYLPKLSGFMGGLYAGSNIDLGNGLILGVDTDIM 110 Query: 101 YT--VPVLADNIHS-------------------------------------LHGIGGSLR 121 ++ + G+ R Sbjct: 111 WSNKDDTKTGKTYVIAPGHINYINKILKDAAINIGKDALEAGAKRTHSFTFKEKWAGATR 170 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGV 165 +R G+ ++ ++ Y G Q + +G + T +G T G Sbjct: 171 VRIGFA-AERIMPYVAGGIAYTQLQDTASISITEKDSDKVIASGTLSDETKTLVGYTLGA 229 Query: 166 GVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 GV+ ++ +++ R EYR S + K N +GV KF Sbjct: 230 GVD-LAMTNNIIVRAEYRYSDFGKKKFSNDKYETSYKTNDFRVGVAYKF 277 >gi|146343868|ref|YP_001208916.1| putative outer membrane protein [Bradyrhizobium sp. ORS278] gi|146196674|emb|CAL80701.1| putative outer membrane protein precursor [Bradyrhizobium sp. ORS278] Length = 278 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 73/248 (29%), Gaps = 67/248 (27%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L AV SL +AS S AAD P A +++ G Y G Sbjct: 6 MKTLASAV---SLLIASSLSTFAADL----SARYTKAPPPAAI-------YNWTGGYFGG 51 Query: 61 SALYNGSFGEEAHH-----------------------------NAGGSIFAGYNVEDSCI 91 + Y G + AGYN + Sbjct: 52 NIGYGWGRSNLGTTLDQTSSWATEPVPFQNQFVAISNNRLNPSGVVGGLQAGYNWQAGPS 111 Query: 92 MYGVEGDVRYTVPVL-------------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138 ++G+E D+ + N + +LR R GY + D+ LLY T Sbjct: 112 VFGIEADINGSGVNKRVVYTGVNVPTTRTFNESIRNDWFMTLRGRAGYAI-DTTLLYVTG 170 Query: 139 GPDVAQKYET---------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G V + K G G T G GVE + + + EY + Sbjct: 171 GLAVGNVKGSWDLTSGNGYNKTGSADQTRAGWTIGAGVE-HAFAPNWTVKAEYLYTDLGS 229 Query: 190 VEGFYNTI 197 + + Sbjct: 230 INYTSGYV 237 >gi|150395644|ref|YP_001326111.1| porin [Sinorhizobium medicae WSM419] gi|150027159|gb|ABR59276.1| porin [Sinorhizobium medicae WSM419] Length = 225 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 84/240 (35%), Gaps = 50/240 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++ FL+ ++ + AAD P D+NG Y G Sbjct: 1 MKRYFLS---AAFLAGALSPVVAADL----------APVESPPAISAPAAFDWNGFYLGG 47 Query: 61 SALYNGS--------FGEEAHHN---AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD- 108 + + FGE AHH+ G + AGYN + + G E D + Sbjct: 48 NVGGGRADVDWTYQPFGETAHHDGKGFLGGVQAGYNWQIDGFVIGAEADFLGSSIDGDTP 107 Query: 109 ------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA---- 158 + S ++R R GY D+LL+YAT G + + G T + Sbjct: 108 CPNPAYSCTSDTKWLSTVRARAGYSF-DNLLVYATGGLGIGRFEIKTDDGAGTSGSTIRN 166 Query: 159 -IGGTAGVGVEVGGLSESLVARLEYRASKYS------------KVEGFYNTISLGVGMKF 205 G AG GVE G S + + EY + + ++T +GV +F Sbjct: 167 DTGWVAGAGVEY-GFSPNWSIKAEYMHHDFGERTYTVDGGNPVDADFRFDTGKIGVNYRF 225 >gi|158425586|ref|YP_001526878.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans ORS 571] gi|158332475|dbj|BAF89960.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans ORS 571] Length = 232 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 68/211 (32%), Gaps = 38/211 (18%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 GVS+LAL +A AAD + + V + G Y G + Y Sbjct: 5 ALAGVSALALLGCGAASAADLATK---------YPVKAIAPVVPVFSWTGFYIGANVGYA 55 Query: 66 GSFGEEA---------------HHNAGGSIFAGYNVED-SCIMYGVEGDVRY-------- 101 + + G GYN + + ++ G+E D+ + Sbjct: 56 WGSTDFHGNTRTGLPYSYSVGGQDDWLGGGQIGYNYQFANNVVVGIEADIDWTGIGSSGV 115 Query: 102 --TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIA 158 P+ I+ G++R R GY D L Y T G Y + Sbjct: 116 AVNGPLAGQTINGSLDYFGTVRARLGYAF-DKFLPYITGGAAWGHVDYGNIYGVGTSSTN 174 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G T G G E ++ ++ A LEY Sbjct: 175 WGWTIGAGFEY-AVTNNITAGLEYLYVDLGG 204 >gi|83308753|emb|CAJ01663.1| putative outer-membrane immunogenic protein precursor [Methylocapsa acidiphila] Length = 282 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 77/249 (30%), Gaps = 70/249 (28%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + S+ A+A SA AAD RA I + G Y G Sbjct: 1 MRTF---LLASAGAVALAGSAFAADLPSRAPPPAYVPPAPI---------FTWTGVYIGG 48 Query: 61 SALYNGSFGEEAHHNAG------------------------GSIFAGYNVEDSCIMYGVE 96 Y + + +AG G GYN++ + G+E Sbjct: 49 QIGYAWTNPNVTYGDAGYTVGGFPLGYADSYNVGGNANGVIGGAHVGYNLQLGQWVLGLE 108 Query: 97 GDVR---------------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 GDV Y + HS GI GS+R R G D LLYAT G Sbjct: 109 GDVDGSSISKTVSVSPYSSYYADYIPTTFHSNLGIQGSIRGRVGIAW-DRALLYATGGVA 167 Query: 142 VAQ-----------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 + + +G T G G+E ++ + R EYR Sbjct: 168 FGGFTSYVSTSYANPQGILSNFPFSGNDSFSQTRVGWTVGGGLEY-AITNNWSVRGEYRY 226 Query: 185 SKYSKVEGF 193 + + + Sbjct: 227 TDFGHTSNY 235 >gi|49475276|ref|YP_033317.1| hemin binding protein d [Bartonella henselae str. Houston-1] gi|49238082|emb|CAF27289.1| Hemin binding protein d [Bartonella henselae str. Houston-1] Length = 274 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 75/267 (28%), Gaps = 94/267 (35%) Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---------YNGS---- 67 AQAAD + VP + G Y G Y G Sbjct: 20 AQAADVI----------VPEQPVPVVAVPAFSWAGFYLGGQVGNFSSKTALSYLGDEKTG 69 Query: 68 -FGEEAH------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIH-------- 111 + G I+AG N + + + G++ DV ++ I Sbjct: 70 KWTPVKKEFVPKLSGFVGGIYAGSNFDINNGFIIGIDTDVMWSGKKNTKIITWPEVPPEV 129 Query: 112 -----------------------------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 G+ R++ G+ V D ++ Y G Sbjct: 130 SSEKKVERVSVGTNQDTSAEVTNGALSHTLKQKWFGATRVKVGF-VVDRMMPYIAGGVAY 188 Query: 143 AQKY---------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 Q + + +G T G G++ ++++++ R EYR S Y Sbjct: 189 TQLQNIFEKEADKTKKAIDISNVIHDEKKTMVGYTLGGGIDF-AMTDNVIVRAEYRYSDY 247 Query: 188 SKVEGFY---------NTISLGVGMKF 205 K + N +GV KF Sbjct: 248 GKKKFADEKIEMRYKTNDFRVGVAYKF 274 >gi|163867925|ref|YP_001609129.1| hemin binding protein D [Bartonella tribocorum CIP 105476] gi|161017576|emb|CAK01134.1| hemin binding protein D [Bartonella tribocorum CIP 105476] Length = 279 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 81/287 (28%), Gaps = 101/287 (35%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + S +L S QAAD V V + G Y G N Sbjct: 6 LISTSIFSLISISVLQAADIV----------VSEQPVPVITVPSFSWTGFYLGGQIG-NF 54 Query: 67 SFGEEAHH--------------------NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV 105 S A++ G ++AG N++ + G++ DV ++ Sbjct: 55 SGKTTANYLTKETGIWNPVEKEYLPKLSGFMGGVYAGSNIDIDNGFIIGIDTDVMWSNKK 114 Query: 106 LADNI-------------------------------------HSLHGIGGSLRIRGGYEV 128 +I G+ R++ G+ Sbjct: 115 STKDILLPKKDETGEKKSLEKTSHTRDSHEDASTTLVEGVSHTLKQKWSGATRVKVGFAF 174 Query: 129 SDSLLLYATVGPDVAQKYETGKAG---------------------EITPIAIGGTAGVGV 167 ++ Y + G Q A + IG T G GV Sbjct: 175 E-RMMPYVSGGIAYTQLQNILSAVVDSATVADSESRAIDSSDWLHDEKKTMIGYTLGGGV 233 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTI---------SLGVGMKF 205 + ++++++ R EYR S + K + + + +GV KF Sbjct: 234 DF-AMTDNVIVRAEYRYSDFGKKKFVQDKVEMSYKTNDFRVGVAYKF 279 >gi|146342874|ref|YP_001207922.1| putative outer membrane protein [Bradyrhizobium sp. ORS278] gi|146195680|emb|CAL79707.1| putative outer membrane protein precursor [Bradyrhizobium sp. ORS278] Length = 214 Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 13/175 (7%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF-GEEAHHN 75 SAQAAD GRG T+ + + GPY G + Y G A Sbjct: 20 GSGSAQAADLGY---GYGRGAPYTVNQPLN---AYSWAGPYLGGTLGYQWGTVGNSATKP 73 Query: 76 AG--GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI-HSLHGIGGSLRIRGGYEVSDS 131 +G G + AGYN ++ + G+EGD+ + + G+LR R GY ++ Sbjct: 74 SGLVGGVTAGYNWQNGSPWVLGIEGDINLSGANDTFAPWKFSNPWFGTLRGRVGYAF-NN 132 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 +L Y T G + + A+G T GVG E GL+++ A++EY Sbjct: 133 ILFYGTGGLALGGLRAETFGLSESHTAVGWTLGVGTEF-GLAQNWTAKIEYLYVD 186 >gi|27378846|ref|NP_770375.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27351995|dbj|BAC49000.1| bll3735 [Bradyrhizobium japonicum USDA 110] Length = 223 Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 29/216 (13%) Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71 ++ F + AA A R P A P+ + + G YAG +A Y S G++ Sbjct: 11 TMCALPFAAVFAAGSACAADLSPRYAAPASAYTAPQPV-YSWTGLYAGFNAGYAES-GDD 68 Query: 72 AHHNAGGSIFA-----------GYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLH---GI 116 A +N G+ GYN + + G+E D D ++S Sbjct: 69 AFNNLAGATGGKVKGAVGGVQIGYNYQLSPMFVVGIENDFEGGDIKNHDALNSAAVSLPW 128 Query: 117 GGSLRIRGGYE-VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 + R R G + LL + T G + + G I + +G TAG GVE L Sbjct: 129 YMTGRARAGIATMDSRLLFFGTAGLAAGEFKD----GPINKMKMGWTAGGGVEWAFL-PK 183 Query: 176 LVARLEYRASKYSKVEGFY------NTISLGVGMKF 205 A+ EY +++ + +T +GV F Sbjct: 184 WSAKAEYLYTEFKHDDLPDWNAAKFHTFRVGVNYHF 219 >gi|75674930|ref|YP_317351.1| outer membrane protein [Nitrobacter winogradskyi Nb-255] gi|74419800|gb|ABA03999.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255] Length = 209 Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 23/210 (10%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + +++ L S +A AAD R + VP +++ G Y G Sbjct: 1 MKKILLITAAVLVSVPAASAADLAPRPYTKAPPYVPA--------PIYNWTGFYLGGHIG 52 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 G+F G + +G++++ ++G+EG + L I + GS Sbjct: 53 --GAFSNGRDGVFLGGVQSGWDLQFAPNWVFGLEG----SYSFLDSGIAGANLGLGSATA 106 Query: 123 RGGYEVSDSLLLYATVGP--DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 R GY L Y G V + G T G G+E +++ ++ Sbjct: 107 RLGYTWGGPALFYVKGGYGTAVLRGNNAIFGINPNIGLDGYTVGAGLEY-MFTQNWAGKV 165 Query: 181 EYRASKYSKVEGFY-----NTISLGVGMKF 205 EY+ + ++ G +T+ +G+ +F Sbjct: 166 EYQYFDFGRIAGTNINLDTHTVKVGLNYRF 195 >gi|154246285|ref|YP_001417243.1| porin [Xanthobacter autotrophicus Py2] gi|154160370|gb|ABS67586.1| porin [Xanthobacter autotrophicus Py2] Length = 207 Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 52/161 (32%), Gaps = 7/161 (4%) Query: 31 HHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-HNAGGSIFAGYNVEDS 89 GR P + G Y G +A Y + G AGYN + + Sbjct: 25 DLSGRYPAPYAQPYVQPVAAFTWTGFYIGANAGYGWGSTVNSDPGGFIGGFQAGYNYQFA 84 Query: 90 C-IMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 + GVE D ++ G++R R G+ D +L+Y T G Q Sbjct: 85 SPFVLGVETDFNFSGLSAGG---YSLDYLGTVRARLGWSF-DRVLVYGTGGFAYGQGSLD 140 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + G T G G EV + AR EY Sbjct: 141 VLGLSSSSTQTGWTIGAGAEV-AFDRNWSARAEYLYVDLGS 180 >gi|298292293|ref|YP_003694232.1| porin [Starkeya novella DSM 506] gi|296928804|gb|ADH89613.1| porin [Starkeya novella DSM 506] Length = 257 Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 72/232 (31%), Gaps = 67/232 (28%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGE--------------EAHHNAG------- 77 P A V + G Y G +A Y G + + +G Sbjct: 28 PVKAPPMMVVPAFTWTGLYLGGNAGYGWGEGSAPWLGYLDYYYGALDQYGYSGGSDPQGW 87 Query: 78 -GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLA-----------------DNIHSLHGIGG 118 G + GYN + D+ ++ G+E D ++ + I + G Sbjct: 88 FGGVQVGYNYQFDNNVVLGIEADAQFGELKDSLSYYGTDLFSGVPDLDLGGIETKIEAFG 147 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYET---------------GKAGEITPIAIGGTA 163 ++R R GY V D LL Y T G + G T Sbjct: 148 TVRARLGYAV-DRLLPYVTGGLAWGNVKMSERWDTYMGGVFQPGLTGTASADETLWGWTV 206 Query: 164 GVGVEVGGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205 G GVE +++ + EY + KV+ T+ LG+ KF Sbjct: 207 GGGVEY-AFTDNWTVKAEYLYADLGDINWDGDAGTKVDVKLQTVKLGINYKF 257 >gi|49475066|ref|YP_033107.1| hemin binding protein c [Bartonella henselae str. Houston-1] gi|49237871|emb|CAF27067.1| Hemin binding protein c [Bartonella henselae str. Houston-1] Length = 276 Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 82/283 (28%), Gaps = 98/283 (34%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 +++ A AQAAD V PT V + G Y G G F Sbjct: 6 LITASAFTFVSVAQAADIV-------VPPSPTPVAPVIVAPTFSWTGFYIGGQI---GGF 55 Query: 69 GEEAH--------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA 107 + G ++AG NV+ ++ GV+ D+ +T Sbjct: 56 SSKTKMDILSKGKTIPVSDDFLPKLSGFMGGLYAGSNVDLGNGLILGVDTDIIWTDKDDT 115 Query: 108 DNI----------------------------------------HSLHGIGGSLRIRGGYE 127 + G+ R+R G+ Sbjct: 116 KTVPPYEIAENHVNYVNKMLKDAGINIGDNKLEAGKYTRALGFTFKEKWAGATRVRIGFA 175 Query: 128 VSDSLLLYATVGPDVAQKYE----------------TGKAGEITPIAIGGTAGVGVEVGG 171 ++ ++ Y G Q + +G + T +G T G GV+ Sbjct: 176 -AERIMPYVAGGIAYTQLQDITSISITKKETGKVIASGNLSDETKTLVGYTLGAGVD-LA 233 Query: 172 LSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 ++ +++ R EYR S + K N +GV KF Sbjct: 234 MTNNVIVRAEYRYSDFGKKKFSNDKYETSYKTNDFRVGVAYKF 276 >gi|312115998|ref|YP_004013594.1| porin [Rhodomicrobium vannielii ATCC 17100] gi|311221127|gb|ADP72495.1| porin [Rhodomicrobium vannielii ATCC 17100] Length = 203 Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 25/212 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L G++ ++ + SA +AD R G + V + G YAGL Sbjct: 1 MKLLSGIAGLTLASVVAIASANSADLYRGQAGGYKDGP-------IVAPVATWTGFYAGL 53 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVE----DSCIMYGVEGDVRYTVPVLADNIHSLHGI 116 + Y + +A G GYN + S ++ GVE D++ + ++ Sbjct: 54 NVGYGWNDDADA-DGIIGGGQIGYNWQGAFGTSPLVLGVETDIQGSDIKNDNDD--KLNY 110 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 G++R R GY + +S L+YAT G + + G T G GVE + +L Sbjct: 111 FGTVRGRLGYALGNS-LVYATGGFAYGE------FDGADKTSTGYTVGGGVE-HKFTPNL 162 Query: 177 VARLEYRASKYSKVEGFY---NTISLGVGMKF 205 + EY + + NT+ +G+ F Sbjct: 163 SVKAEYLYTDLGDNDSDNADFNTVRVGLNYHF 194 >gi|319898374|ref|YP_004158467.1| Pap31 [Bartonella clarridgeiae 73] gi|319402338|emb|CBI75877.1| Pap31 [Bartonella clarridgeiae 73] Length = 292 Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 86/301 (28%), Gaps = 110/301 (36%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S +AL + +AQAAD G V V + G Y G Sbjct: 3 MKCLMTASVVALMTAYAAQAADITVPQETGETIV---------VAPAFSWTGFYVGGQIG 53 Query: 64 -------YNGSFGEEAHH-------------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 ++ G+++ G + G NV+ ++ GV+ DV ++ Sbjct: 54 GFSSKTSFSSRDGDDSKKWLPLHKDLWSKPSGFTGGFYTGSNVDLGNGLILGVDTDVIWS 113 Query: 103 VPVLADNIHS-----------------------------------------LHGIGGSLR 121 G+ R Sbjct: 114 GRKDEKTHEVTVELEDKDKNKHQEKSVSRSPVVFADGEEKEVEITKYGHTLKEKWAGATR 173 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAG----------------------------E 153 IR G+ +D ++ Y G Q ++ + Sbjct: 174 IRIGFA-ADRIMPYVAGGVAYTQLQDSFSTSVSRQKVSGAKAERADKEPSAEPNTVNTVD 232 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMK 204 + IG T G GV+ +++++V R EYR S + K + N +GV K Sbjct: 233 ESKTMIGYTLGAGVDF-AMTDNVVLRAEYRYSDFGKKKLHNDKLEVNYKANDFRVGVAYK 291 Query: 205 F 205 F Sbjct: 292 F 292 >gi|22852215|dbj|BAC16222.1| hypothetical protein [Bartonella henselae] Length = 265 Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 79/258 (30%), Gaps = 92/258 (35%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 S +AL S +AQAAD + V +A + G Y G G+F Sbjct: 2 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSS 49 Query: 71 EAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVP------ 104 + G I+AG N+ ++ GVE D + Sbjct: 50 KVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTS 109 Query: 105 -------------------------------------VLADNIHSLHGIGGSLRIRGGYE 127 D++ G+ R+R G+ Sbjct: 110 SAKVIREDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFT 169 Query: 128 VSDSLLLYATVGP------DVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGG 171 +D ++ Y G V+ T A + T +G T G GV+ Sbjct: 170 AADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDF-A 228 Query: 172 LSESLVARLEYRASKYSK 189 ++++++ R EYR S + K Sbjct: 229 MTDNVLLRAEYRYSDFGK 246 >gi|240851183|ref|YP_002972586.1| hemin binding protein C [Bartonella grahamii as4aup] gi|240268306|gb|ACS51894.1| hemin binding protein C [Bartonella grahamii as4aup] Length = 296 Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 86/299 (28%), Gaps = 97/299 (32%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPV---RRAHHGGRGVVPTIA-TNRYVPIRHDFNGP 56 M+ + +S + +AQAAD V + + T V ++G Sbjct: 1 MKT-KCLIALSIFTFITTSTAQAADTVIFEQSKPKVSLQNDSSSRITPVTVSAPFSWSGF 59 Query: 57 YAGLSALY--------------NGSF-GEEAH-----HNAGGSIFAGYNVEDSC-IMYGV 95 Y G Y +G + + + ++AG N++ +++G Sbjct: 60 YFGGQIGYFSSKNTLDYAQEARDGKWAWVDRNLSPKPSGLRAGLYAGSNIDLGDDLVFGF 119 Query: 96 EGDVRYTVPVLADNIHSL------------------------------------------ 113 + D+ ++ + Sbjct: 120 DTDIVWSGRKSTQTDNGKKILNELDSINIAFKEAGIPIIKPAAQDETIPNYGDIVVSSVT 179 Query: 114 --HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----------------KYETGKAGEIT 155 G+ R R G+ S L+ Y G Q + +G + T Sbjct: 180 LKEKWSGAARARIGFA-SHRLMPYIAGGIAYTQMQYIMSLLSKSQEDSTVFASGNVLDKT 238 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 G T G G + ++++++ R EYR S + K + + G+ KF Sbjct: 239 KTLFGYTVGGGFD-LAMTDNIIMRTEYRYSDFFKKKFANDDLKISSQTHDVRFGIAYKF 296 >gi|254470997|ref|ZP_05084400.1| outer membrane protein [Pseudovibrio sp. JE062] gi|211960139|gb|EEA95336.1| outer membrane protein [Pseudovibrio sp. JE062] Length = 201 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 25/192 (13%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG------SIFAGYNVEDSC 90 P +A + ++G Y GL + G++ + G F GYN Sbjct: 12 SFPCVAFADDMSSVGKWDGFYLGLKGGFGQLTGKDTLGSKGTLDSGVVGAFGGYNHSFDR 71 Query: 91 IMYGVEGDV---RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 I+ GVE D+ YT + S S +R GY+ + L Y + G +A+ Sbjct: 72 IVVGVEADLNATNYTSVSDSGVSRSRSKWNTSATVRLGYD-AGMFLPYLSAGVGLAEYEV 130 Query: 148 TGKAG--EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------VEGF 193 A + IG G G+E ++E++ ARL+Y+ + SK +EG Sbjct: 131 KRFADGQKSENTHIGLVVGAGLEA-MITENVSARLDYKHMEMSKEKYKFQGFNAFHIEGR 189 Query: 194 YNTISLGVGMKF 205 + ++LGV F Sbjct: 190 QDLVTLGVAYNF 201 >gi|154246089|ref|YP_001417047.1| porin [Xanthobacter autotrophicus Py2] gi|154160174|gb|ABS67390.1| porin [Xanthobacter autotrophicus Py2] Length = 255 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 61/201 (30%), Gaps = 46/201 (22%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG-------------SFGEEAHHNAGGSIFA---GY 84 V + G Y G Y ++ +A + G + GY Sbjct: 30 PVKAAPVAPAFSWTGFYIGAQGGYAWADNSFSNTHDLYNTYANDASYTLDGGLVGGVIGY 89 Query: 85 NVEDSCIMYGVEGDVRYTVPVLADNI-----------------HSLHGIGGSLRIRGGYE 127 N + + I+ GVE D + + ++ S G++ R G Sbjct: 90 NYQINNIVLGVEADANWADISGSGSVLRAGELATNCIVSNNPCSSKIDALGTITARLGVA 149 Query: 128 VSDSLLLYATVGPDVAQKYETGK-----------AGEITPIAIGGTAGVGVEVGGLSESL 176 D +LLYA G A T + + G T G GVE + Sbjct: 150 F-DRVLLYAKGGAAWANVKHTAGSTDYEYPEFSYSASNSNTRWGWTVGAGVEWAFF-NNW 207 Query: 177 VARLEYRASKYSKVEGFYNTI 197 A++EY + +N + Sbjct: 208 SAKVEYNYIDLGSNDVTFNFV 228 >gi|83308662|emb|CAJ01570.1| outer membrane protein [uncultured bacterium] Length = 238 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 63/191 (32%), Gaps = 38/191 (19%) Query: 51 HDFNGPYAGLSALY-----------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 + G Y G Y G + G GYN++ + + G+EGDV Sbjct: 38 FTWAGLYLGGQIGYGWGTDTLTVFPRGFGTNFTPNGVVGGAHIGYNLQFNQFVAGLEGDV 97 Query: 100 -----RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GK 150 + + + GS+R R G D LLYAT G + A + Sbjct: 98 EGTSIDSSFSPGGVLYSTRIPVQGSIRGRVGVAF-DRALLYATGGAEFAGFNTSENGFPG 156 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG----------------FY 194 + + G T G G+E ++ + R EYR + + + Sbjct: 157 FDQNSTTRTGWTVGGGIEY-AVTGNWSIRAEYRYADFGHLTDPTPFTFGFGSFVIHHETE 215 Query: 195 NTISLGVGMKF 205 N + G KF Sbjct: 216 NAVRAGFSYKF 226 >gi|217979266|ref|YP_002363413.1| OmpA domain protein transmembrane region-containing protein [Methylocella silvestris BL2] gi|217504642|gb|ACK52051.1| OmpA domain protein transmembrane region-containing protein [Methylocella silvestris BL2] Length = 240 Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 55/168 (32%), Gaps = 33/168 (19%) Query: 52 DFNGPYAGLSALYNGSF-------------------GEEAHHNAGGSIFAGYNVEDSCIM 92 + G Y G Y A G G N + + Sbjct: 32 TWAGFYLGGQVGYGWGSDSGNVTGGFPLSPTIQTASTSTQTQGAIGGAHIGNNWQIQNFV 91 Query: 93 YGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA- 143 G+EGDV T ++ + G++R R GY + D LLYAT G Sbjct: 92 IGLEGDVNGTTLSKMSTPLFNNLYFPYTQSPVQGTVRGRLGYAL-DRTLLYATGGLAYGW 150 Query: 144 ---QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 G + G T G GVE ++++ R EYR +++ Sbjct: 151 IHNDYNIFGSRSSFSTTKAGWTIGGGVEF-AVNDNWSVRAEYRYTRFG 197 >gi|49474039|ref|YP_032081.1| hemin binding protein d [Bartonella quintana str. Toulouse] gi|21689907|gb|AAM68131.1| hemin-binding protein D [Bartonella quintana] gi|49239543|emb|CAF25900.1| Hemin binding protein d [Bartonella quintana str. Toulouse] Length = 294 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 80/300 (26%), Gaps = 112/300 (37%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--- 63 + S +L S AQAAD + +P + + G Y G Sbjct: 6 LITTSIFSLISISVAQAADVI----------IPEQPESVVAVPAFSWTGFYLGGQIGNFS 55 Query: 64 ------YNGSFGEE--------------AHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 Y ++ G I+ G+N + + GV+ DV ++ Sbjct: 56 SKVDLNYLRDLRDQEVGKWASVKKELLPKPSGFVGGIYGGFNFDFGKGFVIGVDTDVIWS 115 Query: 103 VPVLADN------------IHSLHGIGGSL------RIRGGYEVSDSL------------ 132 + N G S GG E D + Sbjct: 116 NKKESKNFNEPMKRRPEILSEEQAGTSKSGIEIPGTEFPGGVEFPDPVPGPERPPFEYDR 175 Query: 133 -------------------------LLYATVGPDVAQKYETGKAG-------------EI 154 + Y G Q T A + Sbjct: 176 IIQATLKQKWSGATRVRVGFSGERLMPYIAGGVAYTQIQNTFVAPPNFVVIDFSRFLHDE 235 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI---------SLGVGMKF 205 +G T G GV+ ++++++ R EYR S + K + + + +GV KF Sbjct: 236 KKTFVGYTLGGGVDF-AMTDNVIMRAEYRYSDFGKKKFGQDRVEIGYKTNDFRVGVAYKF 294 >gi|319405138|emb|CBI78744.1| Pap31 [Bartonella sp. AR 15-3] Length = 278 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 82/287 (28%), Gaps = 96/287 (33%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S +AL + + QAAD G V V + G Y G Sbjct: 3 IKCLMTASVVALMTASAVQAADITVPQEVGETIV---------VAPAFSWTGFYFGGQIG 53 Query: 64 YNGSFGEEAHHN--------------------AGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 S + + G +AG NV+ ++ GV+ D+ + Sbjct: 54 GFSSKTSFSSRDAEDLNKWDSLNKALWSKPSGFMGGFYAGSNVDLGNGLILGVDTDIVLS 113 Query: 103 VPVLAD--------------------------------NIHSLHGIGGSLRIRGGYEVSD 130 N G+ R+R G+ +D Sbjct: 114 GQKDTKEHTVAVELKDQNAKQQREEQPENAKEAEITKYNHTLKEKWAGATRVRIGFA-AD 172 Query: 131 SLLLYATVGPDVAQKYET-----------------------GKAGEITPIAIGGTAGVGV 167 ++ Y G Q +T + + IG T GV Sbjct: 173 RIMPYVAGGVAYTQLQDTLETSVSQGKMPVQRNDETETSSQTNTVDESKTMIGYTLAAGV 232 Query: 168 EVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205 + ++++++ R EYR S + K V N +GV KF Sbjct: 233 DF-AMTDNVMLRAEYRYSDFGKKKLHNDKLEVSYKANDFRVGVAYKF 278 >gi|319783214|ref|YP_004142690.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169102|gb|ADV12640.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 221 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 70/211 (33%), Gaps = 41/211 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L V + A AADP D+ G YAGL Sbjct: 1 MRRLM--VASAGFLAVLAVPAFAADPAVDVPM--------------TAPGFDWTGYYAGL 44 Query: 61 SALYNGSFGE-------------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT----- 102 A Y + + G AG + + G E D+ Y+ Sbjct: 45 QAGYGWGQSDISVTEGAPFSIAPDIDGGFVGGHVAGL-WQFDQAVLGAEADLNYSSVGGT 103 Query: 103 -VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIA 158 V L + GS+ + GY + D LL+Y G A + AG + T Sbjct: 104 TVSALGSTFGTDIKWFGSVNAKAGYAM-DRLLVYGIGGVAFAGIETSQVAGPAFDSTRTN 162 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 +G T G GV+ L++ V +YR + Sbjct: 163 VGWTVGAGVDY-ALTDKFVVGAQYRYYDFGS 192 >gi|319406585|emb|CBI80227.1| Hemin binding protein D [Bartonella sp. 1-1C] Length = 274 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 90/280 (32%), Gaps = 86/280 (30%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S QAAD +R VP I+++ + G Y G Sbjct: 3 IKHLLVACSWTFIPVSMVQAADIMRPHQSQSYQPVPVISSSN----NFSWTGFYVGAQIG 58 Query: 64 YNGSFGEEAHH------------------------NAGGSIFAGYNVEDSC-IMYGVEGD 98 G GE G I+AG NV + ++ G++ D Sbjct: 59 --GFSGEATRSPTQDSVEEDSEGQEFSKIKSPKLSGFIGGIYAGSNVSLNKGLILGIDAD 116 Query: 99 VRYTVPVLADNIHSLH----------------------GIGGSLRIRGGYEVSDSLLLYA 136 V ++ G+ R+R G+ V D ++ Y Sbjct: 117 VVWSGKKNTKVFDVQDMNILERSSTDVSSISISHSLQEKWAGATRMRVGFAV-DRVVPYV 175 Query: 137 TVGP----------------DVAQKYETGKAG------EITPIAIGGTAGVGVEVGGLSE 174 + G +AQ +G + T I +G + G GV+V +++ Sbjct: 176 SGGVSYVQLQNVFTAKGLARALAQARSASPSGSETKVLDETKILVGYSVGGGVDV-AMTD 234 Query: 175 SLVARLEYRASKYSKVEGFYNTI---------SLGVGMKF 205 +++ R EYR S + K + + + +GV KF Sbjct: 235 NVIMRAEYRYSDFGKKKFAKDNVDLSYKTNDFRVGVAYKF 274 >gi|7514148|pir||JC6528 31K major protein, Pap31 - Bartonella henselae phage Length = 281 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 86/289 (29%), Gaps = 97/289 (33%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNG--PYAGLS 61 + + S +AL S +AQAAD + V +A + G Y G Sbjct: 3 IKSLMTTSVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGTGFYIGGQ 53 Query: 62 ALYNGSFGEEAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV- 103 S E G I+AG N++ ++ GVE D + Sbjct: 54 VGNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADR 113 Query: 104 ------------------------------------------PVLADNIHSLHGIGGSLR 121 D++ G+ R Sbjct: 114 EDAKTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATR 173 Query: 122 IRGGYEVSDSLLLYATVGP------DVAQKYETGKAGE----------ITPIAIGGTAGV 165 +R G+ +D ++ Y G V+ T A + T +G T G Sbjct: 174 VRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGG 233 Query: 166 GVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 GV+ ++++++ R EYR S + K N +GV KF Sbjct: 234 GVDF-AMTDNVLLRAEYRYSDFGKKKFEKEGSEFSYKTNDFRVGVAYKF 281 >gi|319408048|emb|CBI81702.1| Hemin binding protein C [Bartonella schoenbuchensis R1] Length = 296 Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 91/303 (30%), Gaps = 110/303 (36%) Query: 4 LFLAVGVSSLALASFCSAQAAD-PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS- 61 + + S AL S +AQAAD PV+ T+ V + G Y G Sbjct: 3 MKCVITASIFALVSASAAQAADMPVQERPT-------TVLPQVVVAPAFSWTGFYLGGQI 55 Query: 62 ALYNGSFGEEAHHN---------------------AGGSIFAGYNVEDSC-IMYGVEGDV 99 ++ + + +N G ++AG NV+ + GV+ D+ Sbjct: 56 GGFSSNSSSKGTYNNVPNGTKEILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDI 115 Query: 100 RYTVPVLA------------------------------------------------DNIH 111 ++ + ++ Sbjct: 116 VWSGDKASKSKSYEVAAKPDTPIGDFNPADGVSGGGYLGVATRAKDEGSQIAKPAKGDVT 175 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK--------------------A 151 G+ R+R G D ++ Y G +Q + + Sbjct: 176 FSDKWSGATRVRLGAAF-DRVMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEG 234 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVG 202 + +G T G GV+ ++++++ R EYR S + K V+ N +GV Sbjct: 235 LSDSKTMVGYTLGAGVDF-AMTDTVMLRAEYRYSDFGKKKFVKDKVEVDLKTNDFRVGVA 293 Query: 203 MKF 205 KF Sbjct: 294 YKF 296 >gi|110632458|ref|YP_672666.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1] gi|110283442|gb|ABG61501.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1] Length = 237 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 70/223 (31%), Gaps = 42/223 (18%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG------- 59 + ++ A SA AAD + A P ++ GPY G Sbjct: 3 LLVATAAACVISSSAFAADILYDAPPAPPAP-------PPPPAPFNWTGPYVGVYGGIAA 55 Query: 60 ----------LSALYNGSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVR-------- 100 + + G E + A G I GY+ + + + G D+ Sbjct: 56 GDIKHNLNVLGNVPFTGLLTERSRAGGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKN 115 Query: 101 --YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-----ETGKAGE 153 Y + S G++R R GY D L+Y G + + Sbjct: 116 SYYVLGTRIAKDSSKLSYLGTVRARAGYAW-DRTLVYGHGGFAYGKTKQTSDFIGTDTLK 174 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 + G T G GVE +++ + EY + K + + + Sbjct: 175 QSQTRTGWTIGAGVEY-AVTDRISLGSEYSYVDFGKKDIYKDA 216 >gi|319405139|emb|CBI78745.1| Hemin binding protein d [Bartonella sp. AR 15-3] Length = 262 Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 70/254 (27%) Query: 16 ASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYNGSFGEEAHH 74 QAAD ++ VP IA+ + G Y G ++G + + Sbjct: 15 IPVSIVQAADIMKPHQSQSYQPVPLIAS----SSSFSWTGFYFGGQIGGFSGEATLKDKN 70 Query: 75 NAG--------------GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS------- 112 +A G ++AG NV ++ G++ D+ ++ ++ Sbjct: 71 DASEDSKLLSPELSGFIGGVYAGSNVGLGKDLILGIDTDMVWSGKKYTKVVNVPGDIEKV 130 Query: 113 ----------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY---------- 146 G+ R+R G+ + D ++ Y + G Q Sbjct: 131 TYRFIKRPNDRFDYVLKEKWAGATRMRVGF-IVDRVMPYVSGGVSYVQLQSVFEVKSSNT 189 Query: 147 ------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------ 194 + T I +G + G G++V +++++V R EYR S + K + Sbjct: 190 QKQNVGINEVKLDETKILVGYSIGGGIDV-AMTDNVVMRAEYRYSDFGKKKFAEEDGELS 248 Query: 195 ---NTISLGVGMKF 205 N +GV KF Sbjct: 249 YKTNDFRVGVAYKF 262 >gi|154246283|ref|YP_001417241.1| porin [Xanthobacter autotrophicus Py2] gi|154160368|gb|ABS67584.1| porin [Xanthobacter autotrophicus Py2] Length = 236 Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 64/183 (34%), Gaps = 30/183 (16%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAG-------GSIFAGYNVE-DSCIMYGVEGDVR-- 100 + G Y G +A Y G++ AG G AGYN + + I+ G+E D++ Sbjct: 56 FSWTGFYIGGNAGYGWGSGQDELGVAGVDPKGWFGGGQAGYNYQFSNNIVAGIEADIQGG 115 Query: 101 ---------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151 + + S G++R R GY +L Y T G Sbjct: 116 DIGASASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAF-GPILPYVTGGFAWGNNSIDYLG 174 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVG 202 + G TAG G+E L++ A+ EY + T +G+ Sbjct: 175 ASQSQTHTGWTAGAGIEY-ALTDHWTAKTEYLYTDLGSKFYDTLGASAGVTAQTARIGIN 233 Query: 203 MKF 205 KF Sbjct: 234 YKF 236 >gi|209883207|ref|YP_002287064.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5] gi|209871403|gb|ACI91199.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5] Length = 644 Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 74/216 (34%), Gaps = 46/216 (21%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 V + A + AQAAD +D+NG Y G Y+ Sbjct: 1 MVMTAAFPALS-AQAADL---------------PLKAPAIPAYDWNGAYVGAHIGYSFGT 44 Query: 69 GEE---------AHHNAGG---SIFAGYNVEDSC-IMYGVEGDVRY-----------TVP 104 HH+ GG AGYNV I+ G E D+ + T P Sbjct: 45 AHGEVIDGSAFPTHHHFGGAMAGFHAGYNVLLPSRILLGAEADISFPSYFESNALIATTP 104 Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPIAIG 160 + + GSLR R GY + LLY T G A + + G Sbjct: 105 TAGNMLTERLDYAGSLRARLGYA-TPQWLLYVTGGFAFAGERFENELAPFKDKRIAYRTG 163 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 TAG G+E ++ ARLEY S + + N+ Sbjct: 164 WTAGAGIEY-AIAPLWSARLEYLYSDFGRTSVVMNS 198 >gi|297248917|ref|ZP_06932626.1| Omp31b [Brucella abortus bv. 5 str. B3196] gi|297174251|gb|EFH33607.1| Omp31b [Brucella abortus bv. 5 str. B3196] Length = 176 Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 31/166 (18%) Query: 70 EEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYT---------VPVLADNIHSLHGIGGS 119 + G + AGYN + D+ ++ G E D + + L + G+ Sbjct: 12 DATAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGT 71 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAIGGTAGVGVEVGG 171 +R R GY ++ L++Y T G + G+ G T G G E Sbjct: 72 VRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTKAGWTLGAGAEY-A 130 Query: 172 LSESLVARLEYRASKYSKVEGFY------------NTISLGVGMKF 205 ++ + + EY + K +T+ +G+ KF Sbjct: 131 INNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF 176 >gi|217977073|ref|YP_002361220.1| porin [Methylocella silvestris BL2] gi|217502449|gb|ACK49858.1| porin [Methylocella silvestris BL2] Length = 239 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 61/196 (31%), Gaps = 40/196 (20%) Query: 48 PIRHDFNGPYAGLSALYNG--------------SFGEEAHHNAGGSIFAGYNVEDSCIMY 93 ++G Y G Y S G GYN++ + I+ Sbjct: 36 APIFTWSGLYLGGQIGYGWANNALSGWGPFFVFSGASYNPSGVLGGAHVGYNLQFNQIVL 95 Query: 94 GVEGDVRYTVPVLADNI-----HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 G+EGDV T + + GS+R R G+ V D L Y T G A Sbjct: 96 GLEGDVEATGVDKTYAFGPTVYTTQIPVQGSIRARFGFAV-DRALFYVTGGAAFASVTNQ 154 Query: 149 G----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----------- 193 + G T G G+E L+ + R EYR S + + Sbjct: 155 YQSYLGYNSLNRSFAGWTIGGGLEY-ALTNNWSVRAEYRYSDFGTATDYTFTAGPGGNVA 213 Query: 194 ----YNTISLGVGMKF 205 N +G KF Sbjct: 214 RHLTENAARVGFSYKF 229 >gi|115525004|ref|YP_781915.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisA53] gi|115518951|gb|ABJ06935.1| putative outer-membrane immunogenic protein precursor [Rhodopseudomonas palustris BisA53] Length = 219 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 77/222 (34%), Gaps = 31/222 (13%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + ++ LA ++ AAD R + V +++G YAG+ Sbjct: 1 MKKILLATTALLAMGATSFAADLPARVYTK---------APVLVAPGVNWSGFYAGVFGG 51 Query: 64 YNGSFGEEAH---------HNAGGSIFAGYNVEDS--CIMYGVEGDV-RYTVPVLADNIH 111 Y S + + G GYN + ++G+E D ++ Sbjct: 52 YGWSQDIKVDGLAIATDEINGGFGGGTVGYNWQAPGSQWVFGIEVDAAGSSLKYTTVGFE 111 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 GS+ R GY V D+ L YA G A T + + G T G G+E Sbjct: 112 DKIDAFGSVTGRVGYAV-DAALFYAKGGFAWADNKVTVPGFSESKLHTGWTVGGGLEY-M 169 Query: 172 LSESLVARLEYRASKYSK--------VEGFYNTISLGVGMKF 205 + + + EY + Y K + +T+ GV F Sbjct: 170 FAPAWSVKGEYMYADYGKETYGNIVDIGATVHTVKAGVNYHF 211 >gi|92115870|ref|YP_575599.1| putative outer membrane protein [Nitrobacter hamburgensis X14] gi|91798764|gb|ABE61139.1| putative outer membrane protein [Nitrobacter hamburgensis X14] Length = 452 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 55/181 (30%), Gaps = 33/181 (18%) Query: 45 RYVPIR-HDFNGPYAGLSALYNGSFGEE---------------AHHNAGGSIFAGYNVED 88 Y P+ ++NG Y G + A G + AGYN + Sbjct: 235 TYAPVATANWNGFYLGGNVGSGTGRDRTTVTNLATGESAAFNLAPDGFIGGVQAGYNWQA 294 Query: 89 SCIMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 I+YG+E D + + N ++ G++R R GY V L YAT Sbjct: 295 GNIVYGLETDFQGSTMEDNKTCIGCEPGASLNFNAKLQWLGTVRGRLGYAV-GPSLFYAT 353 Query: 138 VGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG 192 G + G T G G+E + + EY K Sbjct: 354 GGFAYGNVKTAINEVNFSDTRTGWTVGGGIETPFTLFGLFGPNWTSTTEYLYVDLGKSTN 413 Query: 193 F 193 Sbjct: 414 G 414 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 72/223 (32%), Gaps = 44/223 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ L V ++ A+ SAQAAD R + +D+ G Y G+ Sbjct: 1 MKRILLGVLLAGTAM----SAQAADLAPR----------PYTKAPVMAPVYDWTGFYLGV 46 Query: 61 SALYNGSFGEEAHH--------------NAGGSIFAGYNVEDSCI----MYGVEGDVRYT 102 +A + A G GYN + + + GVE D++ Sbjct: 47 NAGLGLGRDRTVNDFGDGTGNSTYLQPLGAIGGGQIGYNWQTNSFLGPLVLGVEADIQGA 106 Query: 103 V------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---- 152 + + G+ R R G V+ L Y T G G A Sbjct: 107 DMTDNRTNINGVQYNQKLDWFGTARGRIGL-VNGPTLTYLTGGYAYGNVSTRGVADGVPF 165 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 + G T G GVE L + ++EY ++ Sbjct: 166 AFSGNRSGWTWGSGVEA-ALGGNWTGKIEYLYVDLGNRTDVFD 207 >gi|13470446|ref|NP_102014.1| outer membrane protein [Mesorhizobium loti MAFF303099] gi|14021187|dbj|BAB47800.1| outer membrane protein [Mesorhizobium loti MAFF303099] Length = 221 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 76/235 (32%), Gaps = 52/235 (22%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 L V + L A AADP D+ G YAGL A Y Sbjct: 4 LVVASAGLLAVLSVPALAADPTVDVPM--------------TAPGFDWTGYYAGLQAGYG 49 Query: 66 GSFGE-------------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL------ 106 + + + G AG + + G E D+ Y+ Sbjct: 50 WGQSDISGTEGEPFSVSPDINGGFVGGHIAGL-WQFDQAVIGAEADLNYSSVNGTAEAEP 108 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTA 163 +N + GS+ + GY + D +L+Y G A + AG T +G T Sbjct: 109 GNNFGTDIKWFGSVNAKAGYAM-DRVLVYGIGGVAFAGIETSQSAGSAFSETRANVGWTL 167 Query: 164 GVGVEVGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMKF 205 G GV+ L++ V +YR + + NT+ + + KF Sbjct: 168 GAGVDY-ALTDKFVVGAQYRYYDFGSEHYDGSSDFVGRDQDTKLNTVGINLSYKF 221 >gi|319783284|ref|YP_004142760.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169172|gb|ADV12710.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 217 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 35/190 (18%) Query: 49 IRHDFNGPYAGLSA--------LYNGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEG 97 + GPYAG+ +Y A HN G FAGYN++ I+YGVEG Sbjct: 30 PEWTWQGPYAGVFGAGTLEHYKIYGPGAQAGATHNVGSATVGGFAGYNLQSGKIVYGVEG 89 Query: 98 DVRYTVPVLADN-------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150 ++ Y + + + G+ GS++ R G ++ + + T G A+ Sbjct: 90 ELGYRFKKNTFDDIPGPGVLDASTGLFGSVKGRVGMDMGA-YMPFVTAGVTAAKLKTFYP 148 Query: 151 AG--EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-------------N 195 G E +GG G G++V L+ ++ R EY S + K Y + Sbjct: 149 GGNAERDATLVGGVVGAGIDV-ALTHNVFLRGEYDFSFFGKKSLEYCGGGCTLEHTLQTH 207 Query: 196 TISLGVGMKF 205 +G+ MKF Sbjct: 208 DFRVGIAMKF 217 >gi|319403667|emb|CBI77252.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498] Length = 295 Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 86/306 (28%), Gaps = 112/306 (36%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M + + S +AL + + QAAD G V V + G Y G Sbjct: 1 MNNMKCLITTSVVALITASAVQAADIRVPQEIGETIV---------VAPAFSWTGFYLGA 51 Query: 61 SAL-------YNGSFGEEAHH-------------NAGGSIFAGYNVEDSC-IMYGVEGDV 99 ++G +++ G +AG NV+ ++ GV+ DV Sbjct: 52 QIGGFSSKTSFSGPADDDSKKWLPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDV 111 Query: 100 RYTVPVLADNIHS----------------------------------------------L 113 ++ N Sbjct: 112 VFSGQKDTKNDKVTSELDKDNNNNNAPAGAKDKDNGKPEPEKEPEKEKDVKFTQYDHTLK 171 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-------------------------T 148 G+ RIR G+ +D ++ Y G Q + Sbjct: 172 AKWAGATRIRIGFA-ADRIMPYVAGGVAYTQLQDTFTTLTGIKKVPAQKAEGTDKETSGK 230 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISL 199 + + IG T GV+ ++++++ R EYR S + K + N + Sbjct: 231 SNTVDESKTMIGYTLAAGVDF-AMTDNVLLRAEYRYSDFGKKKLHNDKFEVNYKANDFRV 289 Query: 200 GVGMKF 205 GV KF Sbjct: 290 GVAYKF 295 >gi|27379811|ref|NP_771340.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27352964|dbj|BAC49965.1| blr4700 [Bradyrhizobium japonicum USDA 110] Length = 229 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 66/197 (33%), Gaps = 32/197 (16%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVE 96 P V +++ G Y G+ G GG + AGYN + +++GVE Sbjct: 27 PYTKAPVAVASVYNWTGFYLGIVGGGAWENGSGDPKMKGGFVGGTAGYNWQTGNVVFGVE 86 Query: 97 GDVRYT--------------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 D + V + S G++R R GY V +++L Y T G Sbjct: 87 ADGTWADVSASATGATVVPGFGVATATVSSKTDAMGTVRGRIGYAV-NNVLFYGTGGYAW 145 Query: 143 AQKYET----GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---- 194 T G + + G T G GVE + + EY F Sbjct: 146 IDNKITLSALGVSVSDSKFHSGWTVGAGVEA-FFAPQWSVKGEYLYRSLGGETYFSGALP 204 Query: 195 ------NTISLGVGMKF 205 +T+ +GV F Sbjct: 205 TGTLNFHTVQVGVNYHF 221 >gi|15420174|gb|AAK97309.1|AF308167_1 Pap31 [Bartonella henselae phage 60457] Length = 241 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 78/254 (30%), Gaps = 92/254 (36%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72 +AL S +AQAAD + V +A + G Y G G+F + Sbjct: 1 IALISXSAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48 Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVP-------- 104 G I+AG N++ ++ GVE D + Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSA 108 Query: 105 -----------------------------------VLADNIHSLHGIGGSLRIRGGYEVS 129 D++ G+ R+R G+ + Sbjct: 109 KVIREDELVNFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAA 168 Query: 130 DSLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLS 173 D ++ Y G V+ T A + T +G T G GV+ ++ Sbjct: 169 DRIMPYVAGGVSYAQVQAVSSTKVTKAADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMT 227 Query: 174 ESLVARLEYRASKY 187 ++++ R EYR S + Sbjct: 228 DNVLLRAEYRYSDF 241 >gi|49473904|ref|YP_031946.1| hemin binding protein a [Bartonella quintana str. Toulouse] gi|8575707|gb|AAF78059.1|AF266281_1 hemin-binding surface protein A precursor [Bartonella quintana] gi|21689904|gb|AAM68129.1| hemin-binding protein A [Bartonella quintana] gi|49239407|emb|CAF25745.1| Hemin binding protein a [Bartonella quintana str. Toulouse] Length = 272 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 84/284 (29%), Gaps = 96/284 (33%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S +AL S +AQAAD + A + G Y G Sbjct: 3 IKSLITTSVIALVSASAAQAADVIATHE----------AAPVITTPNFSWTGFYIGGQI- 51 Query: 64 YNGSFGEEAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV 103 G+F + G I+AG N++ ++ GVE D + Sbjct: 52 --GNFTSDNKIKGLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWAD 109 Query: 104 --------------------------------------PVLADNIHSLHGIGGSLRIRGG 125 ++D+ G+ R R G Sbjct: 110 CEATKTSAIRTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIG 169 Query: 126 YEVSDSLLLYATVGP---------------DVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 + D ++ Y G K G + T + +G T GV+V Sbjct: 170 FSAFDRVMPYFAGGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMMVGFTVSGGVDV- 228 Query: 171 GLSESLVARLEYRASKYSKVEGFYNT---------ISLGVGMKF 205 ++ +++ R EYR S + K + NT GV KF Sbjct: 229 AMTGNVLLRGEYRYSDFGKKKFLNNTQEFNYKTNDFRFGVAYKF 272 >gi|170750202|ref|YP_001756462.1| carbohydrate-selective porin OprB [Methylobacterium radiotolerans JCM 2831] gi|170656724|gb|ACB25779.1| Carbohydrate-selective porin OprB [Methylobacterium radiotolerans JCM 2831] Length = 708 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 78/243 (32%), Gaps = 69/243 (28%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 A V + L + +A+AAD P D++G Y GL Sbjct: 11 TAALVLTAPLLAPVAARAADLF------------APRPTAQAPAYTDWSGGYVGLEGSAG 58 Query: 66 GSFGE----------------EAHHNAG------------GSIFAGYNVEDSCIMYGVEG 97 GS+G ++ + G G +F G+N + +YG+E Sbjct: 59 GSYGAYSFGPTTIGGRPVPPFKSGDSTGRSDQGKNATTATGGLFGGWNWQAGPWVYGIEA 118 Query: 98 D----------------VRYTVPVLADN-IHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 Y A N + + + G+LR R GY D L+Y T G Sbjct: 119 SLDAANLKRPVPSTIAGFGYADTTPAFNIVRAKTDLYGALRARLGYSF-DRYLIYGTFGL 177 Query: 141 DVAQKYETGKAGEITP----------IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 A ++ +G T G GV+ +++SL ++YR Sbjct: 178 AGANARILANYPDLDAGGQTAARRDLDYVGFTLGAGVQY-AITDSLALGIDYRYIDLGGS 236 Query: 191 EGF 193 F Sbjct: 237 RRF 239 >gi|27375206|ref|NP_766735.1| hypothetical protein blr0095 [Bradyrhizobium japonicum USDA 110] gi|27348342|dbj|BAC45360.1| blr0095 [Bradyrhizobium japonicum USDA 110] Length = 675 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 75/219 (34%), Gaps = 45/219 (20%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 + L A ++S + +++AAD +A + +D+ G Y G Sbjct: 20 RYLRTAAAIASGVMVLPAASRAADLPLKAPA--------------LKTVYDWTGLYIGAH 65 Query: 62 ALYNGSFGEEA------------HHNAGGSIFAGYNVE-DSCIMYGVEGDVRY------- 101 A G + AGYN +S ++ GVEGD+ + Sbjct: 66 VGVTRGTSSATLIDPTLATDDHVFTGATGGVQAGYNWRLNSGLLLGVEGDISFPNYLPSN 125 Query: 102 ----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA--QKYETGKAGEIT 155 + + + SLR R GY + + L YAT G + T G Sbjct: 126 HVVSSAATVLSSAEERWDYVASLRARLGYT-TGNWLFYATGGAAFTGERFLSTPTGGTEE 184 Query: 156 P---IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 G TAG GVE + ARLEY SK+ Sbjct: 185 KVLHTRFGWTAGGGVEY-AFAPHWSARLEYLYSKFDNAN 222 >gi|90422268|ref|YP_530638.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18] gi|90104282|gb|ABD86319.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18] Length = 447 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 31/176 (17%) Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAH-------------HNAGGSIFAGYNVEDSCIMYG 94 ++ G Y G + + G GYN + S +YG Sbjct: 240 APVANWTGFYLGGNFGSAFARNRTTASIGPFSEQFNLGLDGFAGGGQVGYNWQASNWVYG 299 Query: 95 VEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 +E D + + D + G++R R GY + S L Y T G Sbjct: 300 LEADFQGSTQRDNDTAVLFGLAAYDAKLPWFGTVRGRLGYSL-GSTLFYGTGGYAYGNVK 358 Query: 147 --ETGKAGEI--TPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEGF 193 T G + A G TAG G+E + + ++ EY Sbjct: 359 TTITAGTGSETISKTASGWTAGAGIETPFTLLGLVGPNWTSKTEYLYVDLGSTTSD 414 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 61/216 (28%), Gaps = 43/216 (19%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + + + SAQAAD +A + +V +D+ G Y G++A Sbjct: 4 ILAGVALIGTAVSAQAADLATKAPYYKAPIV----------AVYDWTGFYVGVNAGAGLG 53 Query: 68 FGEEAHH--------------NAGGSIFAGYNVED----SCIMYGVEGDVRYTVPVLAD- 108 + A G GYN + ++ G+EGD + Sbjct: 54 RDRAIQNFAPGLTSTTYLQPFGALGGGQIGYNYQTNSLFGPLVIGLEGDFQGADLSDTRT 113 Query: 109 ------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET------GKAGEITP 156 N + R R G +L Y T G T Sbjct: 114 TLSGPVNYSQKLDWFATARGRIGIA-RGPVLNYFTGGFAAGDVRTTVTEGGFTAFDSGKR 172 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 G T G GVE L + ++EY Sbjct: 173 TLTGWTIGSGVEA-ALGGNWTGKIEYLHLDLGNKTD 207 >gi|148255740|ref|YP_001240325.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146407913|gb|ABQ36419.1| putative outer-membrane protein, putative secreted protein [Bradyrhizobium sp. BTAi1] Length = 212 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 59/174 (33%), Gaps = 15/174 (8%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVE 96 PT + + G Y G Y A G GYN + +++G+E Sbjct: 27 PTYTKAPVLAPVQTWTGFYIGAFGGYANEDASTAALKGGFAGGT-VGYNWQQGPLVFGLE 85 Query: 97 GDVRYTVPVLADNIHSLHGI------GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150 D + I + G+ G++R R GY D++LLY T G + Sbjct: 86 ADAAWADINATVGIPGVFGLTDRIESTGTVRGRIGYAF-DTVLLYGTGGYAWGNNKLSAT 144 Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 AG T G AG GVE + + EY F + LG Sbjct: 145 VGGVAGSETKFLSGWAAGAGVE-WMFAPKWSLKGEYLYKSLESSTYFGGAVPLG 197 >gi|75674387|ref|YP_316808.1| outer membrane protein [Nitrobacter winogradskyi Nb-255] gi|74419257|gb|ABA03456.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255] Length = 453 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 79/244 (32%), Gaps = 55/244 (22%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ L V ++S A+ SAQAAD R + +D+ G Y G+ Sbjct: 1 MKKILLGVLLASTAM----SAQAADLAPR----------PYTKAPPIAPVYDWTGLYVGV 46 Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVEDSCI----MYGVEGDVRYTV 103 +A H A G GYN + + ++G+E D++ Sbjct: 47 NAGLGLGRNRAVHDFGVGAISTHLQPLGAVGGGQIGYNWQTNSFFGPLVFGIEADIQGAD 106 Query: 104 PVLADNIHSL-------HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---- 152 + G+ R R G ++ +L Y T G T G Sbjct: 107 MTDNRTNFAGLLQYNQRLDWFGTARGRVGL-INGPMLTYVTGGWAYGHVGTTVIQGGVPF 165 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-----------VEGFYNTISLGV 201 + G T G GVE L + ++EY + E N G+ Sbjct: 166 AFSGGRNGWTFGSGVEA-ALGGNWTGKIEYLYLDFGNRTDSFAGQALRSEMRENIFRAGL 224 Query: 202 GMKF 205 +F Sbjct: 225 NYRF 228 Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 55/190 (28%), Gaps = 41/190 (21%) Query: 42 ATNRYVPIR-HDFNGPYAGLSALYNGSFGEE--------------AHHNAGGSIFAGYNV 86 A+N Y P+ ++NG Y G + A G GYN Sbjct: 230 ASNPYAPVATANWNGLYLGGNVGGGVGRNRTTISNPAGNLAQFNLAPDGFVGGGQIGYNW 289 Query: 87 EDSCIMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135 + I+ G+E D + + +S G++R R GY V +S + Y Sbjct: 290 QAGNIVLGLETDFQGATLQDNKTCIGCVPGASFDFNSKLQWFGTVRGRLGYAVGNS-MFY 348 Query: 136 ATVGPDVAQKYETGKAG----EITPIAIGGTAGVGVEV----------GGLSESLVARLE 181 AT G + G G G+E + + E Sbjct: 349 ATGGFAYGNIRTALNTPLNNFNFSNTRTGYAVGGGIETPLPMVNLFGGPLFGPNWTSTTE 408 Query: 182 YRASKYSKVE 191 Y + Sbjct: 409 YLFVDLGRSS 418 >gi|225853091|ref|YP_002733324.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457] gi|256263422|ref|ZP_05465954.1| Omp31b [Brucella melitensis bv. 2 str. 63/9] gi|260565169|ref|ZP_05835653.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M] gi|265991667|ref|ZP_06104224.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1] gi|265995505|ref|ZP_06108062.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether] gi|225641456|gb|ACO01370.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457] gi|260151237|gb|EEW86331.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M] gi|262766618|gb|EEZ12407.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether] gi|263002451|gb|EEZ15026.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1] gi|263093434|gb|EEZ17484.1| Omp31b [Brucella melitensis bv. 2 str. 63/9] gi|326409637|gb|ADZ66702.1| outer membrane protein Omp31 [Brucella melitensis M28] gi|326539339|gb|ADZ87554.1| outer membrane protein Omp31 [Brucella melitensis M5-90] Length = 202 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 47/182 (25%) Query: 70 EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL---------------------A 107 + G + AGYN + + ++ G E D + + + Sbjct: 22 DVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNGDLSDIGVAGNLSGDES 81 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAI 159 + + G++R R G+ ++ L++Y T G + + A + + Sbjct: 82 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTKA 141 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----------------NTISLGVGM 203 G T G GVE ++ + + EY + K Y +T+ LG+ Sbjct: 142 GWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRLGLNY 200 Query: 204 KF 205 KF Sbjct: 201 KF 202 >gi|17986685|ref|NP_539319.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|256045237|ref|ZP_05448134.1| outer membrane protein Omp31 [Brucella melitensis bv. 1 str. Rev.1] gi|256114189|ref|ZP_05454943.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether] gi|17982306|gb|AAL51583.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 201 Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 47/182 (25%) Query: 70 EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL---------------------A 107 + G + AGYN + + ++ G E D + + + Sbjct: 21 DVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNGDLSDIGVAGNLSGDES 80 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI--------TPIAI 159 + + G++R R G+ ++ L++Y T G + + A + + Sbjct: 81 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTKA 140 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----------------NTISLGVGM 203 G T G GVE ++ + + EY + K Y +T+ LG+ Sbjct: 141 GWTLGAGVEY-AVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRLGLNY 199 Query: 204 KF 205 KF Sbjct: 200 KF 201 >gi|154246284|ref|YP_001417242.1| porin [Xanthobacter autotrophicus Py2] gi|154160369|gb|ABS67585.1| porin [Xanthobacter autotrophicus Py2] Length = 232 Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 67/206 (32%), Gaps = 43/206 (20%) Query: 41 IATNRYVPIR-HDFNGPYAGLSALYNG----------------SFGEEAHHNAGGSIFAG 83 +P++ + G Y G + + S+ + G + G Sbjct: 29 PVKAAPIPVQTFSWTGFYIGGNVGWGWADNTYDVTPFGSLIGYSYSPGTGNGFIGGLQTG 88 Query: 84 YNVED-SCIMYGVEGDVRYT----------VPVLADNIHSLHGIGGSLRIRGGYEVSDSL 132 YN + + ++ GVE D ++ P I G++R R GY + D Sbjct: 89 YNYQFANNVVIGVEADFDWSDIGSSSLVVGGPFTGGAISQNIDYFGTIRARLGYGI-DRF 147 Query: 133 LLYATVGPD-VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L Y T G Q + G T G GVE ++ + + EY ++K Sbjct: 148 LPYITGGAAWAKQNFSDFYGNTYNDTKWGWTVGAGVEY-AITNNWTVKAEYLYLGFNKNT 206 Query: 192 GFY------------NTISLGVGMKF 205 +T LGV KF Sbjct: 207 TNDYFGDSYSVGSNISTAKLGVNYKF 232 >gi|307942791|ref|ZP_07658136.1| porin [Roseibium sp. TrichSKD4] gi|307773587|gb|EFO32803.1| porin [Roseibium sp. TrichSKD4] Length = 183 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 27/181 (14%) Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHN---------AGGSIFAGYNVEDSCIMYGVEGD 98 P + + G Y G YN G++ + G AGYN + GVE + Sbjct: 7 PETNSWQGFYIGGHFGYNWMNGQDDLDDGIGTTSLSSVIGGFHAGYNHMFGQFLLGVEAE 66 Query: 99 VRYTV--PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156 + A + + + R+R GY L YAT G +A + + + Sbjct: 67 GNLSDLNGQTAGGLDASSNWMIAGRVRAGYAFE-HFLAYATAGVSMADASLS-GTKKSSN 124 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA------------SKYSKVEGFYNTISLGVGMK 204 G G G+E +++++ ARLEY+ + Y KV+ + + G+ Sbjct: 125 THTGLVVGGGLEA-FVTQNISARLEYQHHWLNEQSYNTNNTDY-KVDAELDIVRAGLSYH 182 Query: 205 F 205 F Sbjct: 183 F 183 >gi|319408782|emb|CBI82439.1| Hemin binding protein c [Bartonella schoenbuchensis R1] Length = 275 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 80/281 (28%), Gaps = 93/281 (33%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + S L + AQA ++ V + G Y G G Sbjct: 6 LITASIFTLVASSVAQA------ESGRISQESMSVVLPNVVAPSFSWTGFYFGGQI---G 56 Query: 67 SFGEEAH------------------------HNAGGSIFAGYNVE-DSCIMYGVEGDVRY 101 F + G ++AG N + ++ ++ GV+ DV + Sbjct: 57 GFSSKTDLNLNLKGVGSTKLSSIEKDLLPKLSGFMGGLYAGANFDLNNSLVLGVDTDVIW 116 Query: 102 TVPVLADNIHS---------------------------------------LHGIGGSLRI 122 + I G+ R+ Sbjct: 117 SDKKDTKVIRHSGYKTKDGGHGVQRQHHLQEAVSSDELLEKFIVTVSHTLKQKWAGATRM 176 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYE---------TGKAGEITPIAIGGTAGVGVEVGGLS 173 R G+ V D ++ Y G Q + K + T IG T G G++ ++ Sbjct: 177 RVGFAV-DHIMPYIAGGVAYTQLQDILLVSTGIKKDKIVDETKAMIGYTFGGGIDFAMMN 235 Query: 174 ESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 + ++ R EYR S + K + N +GV KF Sbjct: 236 DLIL-RAEYRFSNFGKKKFIKDKFEIDYKTNDFRVGVSYKF 275 >gi|298292422|ref|YP_003694361.1| porin [Starkeya novella DSM 506] gi|296928933|gb|ADH89742.1| porin [Starkeya novella DSM 506] Length = 203 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 56/170 (32%), Gaps = 20/170 (11%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHH--NAGGSIFAGYNVEDSC--IMYGVEGDVRYTVPVL 106 + G Y G +A Y + + G + AGYN + + ++ GVE D +Y Sbjct: 39 FTWTGFYIGANAGYGFGEADFSGDIDGFIGGLQAGYNWQGAGSPLVLGVETDFQYADVSS 98 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 + G++R R GY D L+Y T G G T G G Sbjct: 99 S---VFSLDYFGTVRARVGYAF-DQFLVYGTGGFAYGAGSYELLGLTNDRNHFGWTVGAG 154 Query: 167 VEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGVGMKF 205 E L + + EY V N I GV +F Sbjct: 155 AEY-ALGNNWSVKGEYLYLDMGEETYATFTGPRDVGLTSNVIRAGVNYRF 203 >gi|77917690|ref|YP_355505.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM 2380] gi|77543773|gb|ABA87335.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM 2380] Length = 225 Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 58/166 (34%), Gaps = 25/166 (15%) Query: 49 IRHDFNGPYAGLSALYNGSFGEEAHH------------NAGGSIFAGYNVEDSCIMYGVE 96 D++GPY G ++ + E + G ++ G+N IM G E Sbjct: 31 ALSDYSGPYIGGFVGHSWADLEYSDSWNPGYDLNADIEGFVGGLYFGHNYMIDNIMLGFE 90 Query: 97 GDVRYTVPVLADNIHSLH--------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 D + ++ + LR R G+ V ++ L Y G VA+ Sbjct: 91 ADAGIGDLGEGADKNNSYNDWSAFDIDWDAHLRARAGF-VYNTTLFYVAGGLAVAKVAVD 149 Query: 149 G---KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 G G T G G+E ++E L AR+EY Y Sbjct: 150 DTDSGYGGDNATHFGWTIGAGIE-QKITEHLTARIEYLYDDYGSES 194 >gi|240849916|ref|YP_002971305.1| hemin binding protein A [Bartonella grahamii as4aup] gi|240267039|gb|ACS50627.1| hemin binding protein A [Bartonella grahamii as4aup] Length = 288 Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 65/249 (26%), Gaps = 84/249 (33%) Query: 40 TIATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAH---------------HNAGGSIFAG 83 T + G Y G ++G E G I+ G Sbjct: 41 TAPAVISAAPSFSWTGFYIGGQVGNFSGKVDEFDSETKKKITDKDWTPKPSGFMGGIYVG 100 Query: 84 YNVEDSC-IMYGVEGDVRYTVPVLA----------------------------------- 107 NV+ ++ GVE D + + Sbjct: 101 SNVDLGNGLILGVETDAVWADREDSKTHSAVIGETGLAAFKNKLTAAEATFASGKNIDNV 160 Query: 108 -------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI------ 154 + G+ R+R G+ D +L Y G Q Sbjct: 161 TKDGKRVEGTSIKEKWSGATRVRIGFAAVDRILPYFAGGIAYTQLQVVNSLKAEGADGAE 220 Query: 155 ---------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NT 196 + +G T G GV+ ++++++ R EYR S + K N Sbjct: 221 IASAKMFDQSKTMVGFTVGGGVDF-AMTDNVLLRAEYRYSDFGKKAFVKDEDKIAYKTND 279 Query: 197 ISLGVGMKF 205 +GV KF Sbjct: 280 FRVGVAYKF 288 >gi|90418791|ref|ZP_01226702.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans SI85-9A1] gi|90336871|gb|EAS50576.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans SI85-9A1] Length = 263 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 71/237 (29%), Gaps = 55/237 (23%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L L + ++ A AAD + P V + G Y G Sbjct: 1 MKRLALLLATTAF----VTPALAADVIYEEPPA-----PAPMAIEPVATTATWTGLYIGG 51 Query: 61 SAL---------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 A ++ + G GY+ + + + G D+ Sbjct: 52 QAGVAFGNESDGATFNPGGGGPFGTGTYSEDDDNAGFIGGGHIGYDYQINDFVVGAVADI 111 Query: 100 RYTVPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG 149 Y + + G G++R R GY + DS+LLY T G A Sbjct: 112 NYIDAETNRSYTTGGGSTFSTSSDINYLGTVRARVGYAM-DSVLLYGTGGLAYAGVDNNA 170 Query: 150 KAGEITPIA-------------IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 A + IG G GV+V + ++ +EY + + Sbjct: 171 SAPASSGTFTNYTFEQDENDTDIGYAVGGGVDVMA-TNNISFGVEYLYTNLGSNDQT 226 >gi|92115908|ref|YP_575637.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14] gi|91798802|gb|ABE61177.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14] Length = 245 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 80/232 (34%), Gaps = 41/232 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ LA V+ + +A+ AQAAD R T A +++ G Y G Sbjct: 18 MKKILLA-SVAIVGMAAIVPAQAADLAAR--------PYTKAPVYEAAPIYNWTGFYLGG 68 Query: 61 ----------SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN 109 + G G GY+ + ++G+ Y+ D+ Sbjct: 69 HVGGAFGGDHNLAAPGFTRNGNDGVFMGGGQIGYDYQFSPNWVFGIGA--NYSFLDTNDH 126 Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-----GGTAG 164 G+ GS+ R GY LLYA G A T G T G T G Sbjct: 127 PFVNRGL-GSVTGRLGYTW-GPALLYAKGGYAWADTRNTNGFGGDTFSNNRIGRDGFTVG 184 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGF-----------YNTISLGVGMKF 205 G+E +++ +EY+ + +TI +G+ +F Sbjct: 185 GGLEY-MFTQNWSGLIEYQYYDFGTTRTTFRNQDVRFRNDEHTIKVGLNYRF 235 >gi|83308665|emb|CAJ01573.1| outer membrane protein [uncultured bacterium] Length = 275 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 57/184 (30%), Gaps = 43/184 (23%) Query: 51 HDFNGPYAGLSALYNGS------------------FGEEAHHNAGGSIFAGYNVEDSCI- 91 ++G Y G+ Y F G GYN++ + Sbjct: 51 FTWSGLYLGVQVGYAWGSDPVDEVDVLTPRFANNAFFNLQPKGVLGGAHVGYNLQFTNWN 110 Query: 92 -------MYGVEGDVRYTVPVLADNIHSL------HGIGGSLRIRGGYEVSDSLLLYATV 138 + G+EG V + S GSLR R G D LL+Y T Sbjct: 111 WLSSSGVVIGLEGSVDGSSLSGTRTSASGLTMRLRTETQGSLRARIGLAW-DRLLIYGTG 169 Query: 139 GPDVAQKYETGKA---------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G A + + + G T G GV+ ++ + +EYR S + + Sbjct: 170 GAAFAGFDDNYVTVFGTPFFVDEQDSKTRTGWTVGGGVDY-AITPNWSIGVEYRYSDFGR 228 Query: 190 VEGF 193 + Sbjct: 229 TTDY 232 >gi|260460749|ref|ZP_05808999.1| outer membrane protein [Mesorhizobium opportunistum WSM2075] gi|259033326|gb|EEW34587.1| outer membrane protein [Mesorhizobium opportunistum WSM2075] Length = 221 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 79/234 (33%), Gaps = 50/234 (21%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 L V + L A A AADP D+ G YAG+ A Y Sbjct: 4 LIVASAGLLAALSVPALAADPTVDVPM--------------TAPGFDWTGYYAGMQAGYG 49 Query: 66 GSFGEEAHH---------NAGGSIFAGYN---VEDSCIMYGVEGDVRYTVPVLADNIHSL 113 + + + GG G+ + + G E D+ Y+ ++ + Sbjct: 50 WGQSDISGTGGGPFSVSPDIGGGFVGGHVAGLWQFDQAVIGAEADLNYSSVDGTADLGAG 109 Query: 114 H------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAG 164 + GS+ + GY V D +L+Y G A + AG T +G T G Sbjct: 110 NTLGTDVKWFGSVNAKAGYAV-DRVLVYGIGGVAFAGIETSQSAGAAFSETRTNVGWTVG 168 Query: 165 VGVEVGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMKF 205 GV+ L++ V +YR + + NT+ + + KF Sbjct: 169 AGVDY-ALTDKFVVGAQYRYYDFGSEHFDGSNGFADRDQDTKLNTVGVNLSYKF 221 >gi|300024284|ref|YP_003756895.1| porin [Hyphomicrobium denitrificans ATCC 51888] gi|299526105|gb|ADJ24574.1| porin [Hyphomicrobium denitrificans ATCC 51888] Length = 218 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 69/191 (36%), Gaps = 27/191 (14%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVE 96 P A Y P ++G Y G++ Y S G GYN + +++G+E Sbjct: 32 PPPEAAPVYQPAI--WDGAYIGINGGYGWSDARPTEPEGGFGGGQIGYNWQRGRVVFGLE 89 Query: 97 GDV------RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKY 146 GD D S ++R R G+ S LLYAT G VA + Sbjct: 90 GDFQGADISGRAYTFDGDTARSDMNWFSTVRGRLGFT-SGPWLLYATGGLAVADVDHRAN 148 Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA------------SKYSKVEGFY 194 G++ + G G G+E S++ A+ EY + ++ Sbjct: 149 LEGQSFRGSDTLTGYAVGGGLE-WKFSQNWSAKAEYLYLGLGDSKLTADNGDFVRINNDV 207 Query: 195 NTISLGVGMKF 205 T+ +G+ F Sbjct: 208 QTVRVGLNYHF 218 >gi|15420180|gb|AAK97312.1|AF308170_1 Pap31 [Bartonella henselae phage 60457] Length = 240 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 77/253 (30%), Gaps = 92/253 (36%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72 +AL S +AQAAD + V +A + G Y G G+F + Sbjct: 1 IALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48 Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV--------- 103 G I+AG N+ ++ GVE D + Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTSSA 108 Query: 104 ------------------------PVLADNIHS----------LHGIGGSLRIRGGYEVS 129 +D++ G+ R+R G+ + Sbjct: 109 KVIREDELANFKDSLKNANAVFAKDKTSDDVKQDEKHTDSLALKEKWSGATRVRIGFTAA 168 Query: 130 DSLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLS 173 D ++ Y G V+ T A + T +G T G GV+ ++ Sbjct: 169 DRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMT 227 Query: 174 ESLVARLEYRASK 186 ++++ R EYR S Sbjct: 228 DNVLLRAEYRYSD 240 >gi|115522754|ref|YP_779665.1| porin [Rhodopseudomonas palustris BisA53] gi|115516701|gb|ABJ04685.1| porin [Rhodopseudomonas palustris BisA53] Length = 446 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 51/175 (29%), Gaps = 30/175 (17%) Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAH------------HNAGGSIFAGYNVEDSCIMYGV 95 ++ G Y G + + G GYN + + ++G Sbjct: 241 APVANWAGFYLGGNFGSGTARERTTATRVATEQFNLAPDGFIGGGQIGYNWQAANWVFGG 300 Query: 96 EGDVRYTVPVLA--------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 E D + + D+ + ++R R GY V S L Y T G V Sbjct: 301 EADFQGSTQRDNRTIVQGGVDSYDAKLPWLATVRGRLGYSV-GSTLFYGTGGYAVGSVKT 359 Query: 148 T----GKAGEITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEGF 193 + T G TAG G+E + ++ EY V Sbjct: 360 SIATPAFTETFTKTKSGWTAGAGIETPFTLFNLFGPNWTSKTEYLYVDLGSVNNT 414 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 66/215 (30%), Gaps = 42/215 (19%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + + + SAQAAD +A + +V +D+ G Y G++A Sbjct: 4 ILAGVALVGTAVSAQAADLAVKAPYLKAPIV----------AVYDWTGFYIGVNAGVGLG 53 Query: 68 FGEEAHH--------------NAGGSIFAGYNVEDSCI----MYGVEGDVRYTVPVLADN 109 H+ A G GYN + + + G+E D++ T Sbjct: 54 RDLATHNITPAAFATTYLQPQGALGGGQVGYNWQTNSFLGPLVLGLEADIQGTGMSDDRT 113 Query: 110 I--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----KAGEITPI 157 G+ R R G +L Y T G T + I Sbjct: 114 NLFGNVAAYSQKLDWFGTARGRIGLA-KGPVLSYFTGGFAYGNVKTTVTEGLASDSINRT 172 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 G T G GVE L + ++EY + Sbjct: 173 QTGWTIGSGVEA-ALGGNWTGKIEYLYVNLGNKDD 206 >gi|299132804|ref|ZP_07025999.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2] gi|298592941|gb|EFI53141.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2] Length = 694 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 72/193 (37%), Gaps = 35/193 (18%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALY----------NGSFGEEAHHN--AGGSIFAGYNVE 87 D++G Y G Y +G+ +H A + AGYNV Sbjct: 69 AADFPVKAAPVFDWSGAYVGAHFAYGFGSSHASVFDGASFNTRNHFGTATAGVQAGYNVV 128 Query: 88 DSCIM-YGVEGDVRYTVPVLADN-----------IHSLHGIGGSLRIRGGYEVSDSLLLY 135 + GVE D+ + + + + GSLR R GY + LLY Sbjct: 129 LPSRVLLGVEADLSFPNYIESSGGVAVTPTMNGTLTERLDYAGSLRARLGYA-APRWLLY 187 Query: 136 ATVGPDVA--QKYETGKAGEITPIAI--GGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 T G A + T A + +++ G AGVG E + AR+EY S Y + Sbjct: 188 VTGGLAFAGERFEYTSPAFDDKKLSLRTGWIAGVGAEY-AIGPKWSARVEYLYSDYGR-- 244 Query: 192 GFYNTISLGVGMK 204 + + LG G++ Sbjct: 245 ---DHVQLGSGLQ 254 >gi|3426106|emb|CAA07721.1| hypothetical protein [Rhizobium leguminosarum] Length = 139 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 47/138 (34%), Gaps = 18/138 (13%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 ++ + + S A AAD V + P D++G Y GL Sbjct: 1 MYTKIIALAAVAFSAVPAFAADAVVQD--------PAYVQQGQTQSAFDWSGFYLGLQGG 52 Query: 64 YNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 Y E+ I+ GYN + ++G+E D Y D Sbjct: 53 YTSTHASYLDGSEQDLDGGSTGIYGGYNFQHGPFVFGIENDFNYNWK---DGSDVSLKWD 109 Query: 118 GSLRIRGGYEVSDSLLLY 135 GS R R GY + D L+Y Sbjct: 110 GSARGRVGYAL-DRTLIY 126 >gi|319899124|ref|YP_004159217.1| Hemin binding protein d [Bartonella clarridgeiae 73] gi|319403088|emb|CBI76643.1| Hemin binding protein d [Bartonella clarridgeiae 73] Length = 303 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 86/316 (27%), Gaps = 124/316 (39%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L S AL AQAAD V +PT+ + P + G Y G Sbjct: 1 MKRLTT----SIFALLLVSEAQAADFV---IPYQSSTIPTVIS----PPHFSWTGIYFGG 49 Query: 61 SAL--------YNGSFGEEAH-----------HNAGGSIFAGYNVEDSC-IMYGVEGDVR 100 Y + GE G ++AG + + + ++ G + D+ Sbjct: 50 HVGGFEGPSTSYMSTQGERQKLLFKNNPSPKFSGVIGGLYAGASFDVNNGLVLGFDTDIN 109 Query: 101 YTVPVLADNIHS---------------------------------------LHGIGGSLR 121 ++ ++ G+ R Sbjct: 110 WSGAKDEKSVDMDSFVMALRKMDNVSNKDNVSNKIFPGFSLEQFISLKQTLKQKWVGATR 169 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETG-------------------------------- 149 +R G+ D ++ Y G + Sbjct: 170 VRIGFGF-DRIMPYVAGGVAYTHLKDVYVMETVTQETLKTGIRQSSQSSQSSQSSQSSQS 228 Query: 150 -----------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----- 193 IG T G G++ ++++L+ R EYR S ++ E Sbjct: 229 SQSSQSSQLDFSMESEKKTMIGFTIGGGLD-LAVTDNLILRAEYRYSDFNNKEFTKERFT 287 Query: 194 ----YNTISLGVGMKF 205 N S+GV KF Sbjct: 288 IKYKSNGFSVGVAYKF 303 >gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 212 Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 26/221 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +++ AV + + +A SA AAD + + V + HD++G Y G Sbjct: 2 LKRSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVASGP--------HDWSGNYIGA 53 Query: 61 SALYNGSFGE---EAHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHG 115 + S A G + G N++ +++G E G+ + Sbjct: 54 QIGASSSKVPGPFTNRTGALGGVVVGKNMQSGNVVFGAELEGNFAEAEHRIGHGGSLQQS 113 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 G+ + + GY D L+Y T G V + G G GVE L+ Sbjct: 114 WNGNAKGKVGYAF-DKTLVYGTAGYGVTRFKAKDNTTSAPGWEGGALIGAGVE-QALTGP 171 Query: 176 LVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 L + EY ++S V+ ++I G+ KF Sbjct: 172 LSVKAEYDFQRFSDVKSRVNGVEQRNNLKNHSIKAGLNYKF 212 >gi|85713978|ref|ZP_01044967.1| possible outer membrane protein [Nitrobacter sp. Nb-311A] gi|85699104|gb|EAQ36972.1| possible outer membrane protein [Nitrobacter sp. Nb-311A] Length = 453 Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 70/221 (31%), Gaps = 44/221 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ L V ++S A+ SAQAAD R + +D+ G Y G+ Sbjct: 1 MKRILLGVLLASTAM----SAQAADLAPR----------PYTKAPPMAPVYDWTGLYLGV 46 Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVED----SCIMYGVEGDVRYTV 103 +A H A G GYN + I++GVE D++ Sbjct: 47 NAGLGVGRNRAVHDFGPLAISTHLQPLGAVGGGQIGYNWQTNSFFGPIVFGVEADLQGAD 106 Query: 104 PVLADNIHSLH-------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQ---KYETGKAGE 153 G+ R R G V+ ++ Y T G G Sbjct: 107 MTDNRTNFIGALQYNQRLNWFGTARGRVGL-VNGPMMTYLTGGWAYGNVGTTVIQGGVPS 165 Query: 154 I-TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 G T G GVE L + ++EY F Sbjct: 166 AFGGGRSGWTWGSGVEA-ALGGNWTGKIEYLYLDLGNRTDF 205 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 41/186 (22%) Query: 46 YVP-IRHDFNGPYAGLSALYNGSFGEE--------------AHHNAGGSIFAGYNVEDSC 90 YVP + ++NG Y G + A + G GYN + Sbjct: 234 YVPMVTANWNGLYLGGNFGGGVGRNRTTISNPAGNLAQFNLAPNGFVGGGQIGYNWQAGN 293 Query: 91 IMYGVEGDVRYT-----------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 I++G+E D + + VP + + +S G++R R GY V +S + YAT G Sbjct: 294 IVFGLETDFQGSTLEDNKACFFCVPGASVDFNSKLQWFGTVRGRLGYAVGNS-MFYATGG 352 Query: 140 PDVAQKYETGKAG----EITPIAIGGTAGVGVEV----------GGLSESLVARLEYRAS 185 + G G G+E + + EY Sbjct: 353 FAYGNVQTALNTPLNNFSFSNTRTGYAVGGGIETPLPLVNLFGGPLFGPNWTSTTEYLYV 412 Query: 186 KYSKVE 191 + Sbjct: 413 DLGRSS 418 >gi|158425587|ref|YP_001526879.1| putative outer-membrane immunogenic protein [Azorhizobium caulinodans ORS 571] gi|158332476|dbj|BAF89961.1| putative outer-membrane immunogenic protein [Azorhizobium caulinodans ORS 571] Length = 202 Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 52 DFNGPYAGLSALYN-GSFGEEAHHNAGGSIFAGYNVEDSC--IMYGVEGDVRYTVPVLAD 108 + G Y G + Y GS G ++ G + AGYN++ + I+ G+E D + Sbjct: 40 SWTGFYVGGNIGYGWGSAGADSPKGFLGGLQAGYNLQMAGSPIVLGLETDFDWAGMNDG- 98 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 + G++R R G+ D +L+Y T G + + + G G G E Sbjct: 99 --NYSQDYIGTVRARAGFAF-DRVLIYGTAGFAYGKGSYQVFGLSNSQTSYGWALGAGAE 155 Query: 169 VGGLSESLVARLEYRASKYSKVE 191 + + AR EY Sbjct: 156 Y-AIDRNWSARAEYMYVDLGNST 177 >gi|148258659|ref|YP_001243244.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146410832|gb|ABQ39338.1| putative outer membrane protein with ompA domain [Bradyrhizobium sp. BTAi1] Length = 662 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 62/175 (35%), Gaps = 31/175 (17%) Query: 44 NRYVPIRHDFNGPYAGLSALYN-------------GSFGEEAHHNAGGSIFAGYNV-EDS 89 R D++G Y G A Y G+ G + AGYN S Sbjct: 35 ARMAQTVFDWSGIYVGAHAGYTRDHAQASLIDPIGGAGAGSRFSGLTGGVQAGYNWVTRS 94 Query: 90 CIMYGVEGDVRYTVPVL-----------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138 ++ G EGD + + ++ L S R R GY D L+YAT Sbjct: 95 GLLLGFEGDFSFPNSLTSNHTVAMLNRPGSSVSELWDYVASARGRIGYAQGD-WLVYATG 153 Query: 139 G--PDVAQKYETGKAGEIT--PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G + T AG+ +G TAG G+E + RLEY S++ Sbjct: 154 GLAWTGGRFINTTAAGDEKLLTTRVGWTAGAGIE-RAFAPHWSWRLEYLYSQFEN 207 >gi|240849917|ref|YP_002971306.1| hemin binding protein A [Bartonella grahamii as4aup] gi|240267040|gb|ACS50628.1| hemin binding protein A [Bartonella grahamii as4aup] Length = 296 Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 82/303 (27%), Gaps = 116/303 (38%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + S L S +AQAAD + + + G Y G G Sbjct: 6 LIATSVATLISASAAQAADVMIPHEVAPAVIA--------AAPSFSWTGFYLGGQV---G 54 Query: 67 SFGEEAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106 +F + G I+AG NV+ ++ GVE D + Sbjct: 55 NFSSKTKVTIPGEERELFKKDNIPSPSGFMGGIYAGSNVDLGNGLILGVETDAVWADREE 114 Query: 107 ADNIHS----------------------------------------LHGIGGSLRIRGGY 126 + G+ R+R G+ Sbjct: 115 SKKARELTLTEKNAADFNAALEKAKVELKDQQQFQKDDKVTETHSYKEKWSGATRVRIGF 174 Query: 127 EVSDSLLLYATVGPD-------------VAQKYETGKAG--------------------- 152 D ++ Y G + KAG Sbjct: 175 AAVDRIMPYVAGGIAYAQVQGIQSVAGKGERAKVEQKAGGDEIVPEAGAKQSIDLTGGTW 234 Query: 153 -EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT---------ISLGVG 202 + T +G T G GV+ ++++++ R EYR S + K + +T +GV Sbjct: 235 ADDTKTMLGFTIGGGVDF-AMTDNVLLRAEYRYSDFGKKKFANDTREFNYKTNDFRVGVA 293 Query: 203 MKF 205 KF Sbjct: 294 YKF 296 >gi|148252036|ref|YP_001236621.1| putative 31 kDa outer-membrane immunogenic protein [Bradyrhizobium sp. BTAi1] gi|146404209|gb|ABQ32715.1| putative 31 kDa outer-membrane immunogenic protein precursor [Bradyrhizobium sp. BTAi1] Length = 219 Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 26/176 (14%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE-DSCIMYGVEGDV 99 + G YAG + + + + AG G + AGYN + + G+E D+ Sbjct: 45 FSWTGFYAGANVGGAFTGNDSVTNLAGGNGGKLSGVIGGMQAGYNYQVSPLFVVGIENDL 104 Query: 100 RYTVPVLADNI---HSLHGIGGSLRIRGGYEVSD-SLLLYATVGPDVAQKYETGKAGEIT 155 +T ++ + R R G+ + D L LY T G + + G + Sbjct: 105 DFTGLSRQGDLVNPAVSVPWLTTGRARAGFTMLDQRLFLYGTAGLAAGELKD----GPVH 160 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------NTISLGVGMKF 205 + +G TAG G E L A+LEY + +++ +G+ F Sbjct: 161 KVKMGWTAGGGAEWAFL-PKWSAKLEYLYTDLKHDALPDWRAAKIHSVRVGLNYHF 215 >gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188] gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 212 Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 26/221 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +++ AV + + +A SA AAD + + V HD++G Y G Sbjct: 2 LKRSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVAAGP--------HDWSGNYVGA 53 Query: 61 SALYNGSFGE---EAHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHG 115 + S A G + G N++ +++G E G+ + + Sbjct: 54 QVGASSSRVPGPFTNRTGALGGVVVGKNMQSGNVVFGGELEGNFAEAEHRIGNGGSLQQS 113 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 G+ + + GY D L+Y T G V + G G GVE LS Sbjct: 114 WNGNAKGKVGYAF-DKTLVYGTAGYGVTRFKAKDNTTSAPGWEGGALVGAGVE-QALSGP 171 Query: 176 LVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 L + EY +++ V+ ++I G+ KF Sbjct: 172 LSVKAEYDFQRFNDVKSRVNGVEQRNNLKNHSIKAGLNYKF 212 >gi|319404477|emb|CBI78084.1| Hemin binding protein D [Bartonella rochalimae ATCC BAA-1498] Length = 267 Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 81/273 (29%), Gaps = 84/273 (30%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63 + S L S QA D V + P + + + G Y G Sbjct: 4 LTASVFTLFSISIVQATDFV--IPYQSYTASPVV-----LSSTFSWTGFYFGGKIGVFSG 56 Query: 64 -------------YNGSFGEEAH---HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV- 105 +N F ++ G ++ G N+ + + G + D+ ++ Sbjct: 57 QSTSSFIDSNNVKHNIIFQNQSSPKLSGVVGGLYTGLNININNGFVLGFDTDINWSGAKD 116 Query: 106 ----------LADNIHSLH-----------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 ADN ++R R G+ D ++ Y G V + Sbjct: 117 TKVIDIIASLKADNNKKSQIDFDIKQSLQQKWLSAIRGRIGFSF-DRVMPYIAGGISVTK 175 Query: 145 KYETGK-----------------------AGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 T + + I G T G G++ ++++ + R E Sbjct: 176 LQSTYLKFFVPSKNNSLTRSSLEKTPPVLSTSNSKIMNGYTIGGGLDF-AITDNFILRAE 234 Query: 182 YRASKYSKVEGFYNTISL---------GVGMKF 205 Y S + K E N +++ GV KF Sbjct: 235 YNYSDFGKKEFVNNNMNVSYKSNAFYFGVACKF 267 >gi|90419518|ref|ZP_01227428.1| possible outer membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90336455|gb|EAS50196.1| possible outer membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 273 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 71/240 (29%), Gaps = 58/240 (24%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L++ +S AL AQAAD + A P+ + G Y G+ Sbjct: 1 MRTYLLSILTASTALTFASYAQAADVIYEEPM-------APAPMEISPVASGWTGIYLGV 53 Query: 61 SAL----------------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + +F + G GY+ + ++ Sbjct: 54 QGGGAFNPQDPDNVDLRTNGFAFGGSAVQTAFGSNFDSNVDSSFLGGAHIGYDYQMDSVV 113 Query: 93 YGVEGDVRYTVPVLADNIHSLH----------GIGGSLRIRGGYEVSDSLLLYATVGPDV 142 +GV D+ + N S G++R R GY V+ L Y T G Sbjct: 114 FGVLADINAIDLTRSSNADSNAPAYYRTDRELNYLGTVRARVGYLVTPDALAYVTGGLAY 173 Query: 143 AQ------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 T + G T G G+EV ++++ EY + Sbjct: 174 GDVDYSFSTNSPAVTGATPAVVSEDEDSFGYTVGGGMEV-KFTDNMSFGAEYLYTNLGGS 232 >gi|76885942|gb|ABA60112.1| pap31-like protein [Bartonella bacilliformis] Length = 300 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 87/310 (28%), Gaps = 120/310 (38%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + V S AL S +AQAAD + +P + + G Y G Sbjct: 3 IKCLVTASVCALISASAAQAADVM----------IPQEISPIISAPTFSWTGLYLGGQIG 52 Query: 64 ----------------YNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV- 105 + + + G ++AG N++ ++ GV+ D+ + Sbjct: 53 GLSGKHDFKAIGKDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEG 112 Query: 106 -----------------------------------LADNIHSLHGIGGSLRIRGGYEVSD 130 L N G+ R+R G+ +D Sbjct: 113 KLFSNHRAETQDDADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFG-AD 171 Query: 131 SLLLYATVGPDVAQKYETGKA--------------------------------------- 151 ++ Y + G Q G A Sbjct: 172 RIMPYVSGGVAYTQVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALD 231 Query: 152 -------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI------- 197 + +G T G GV+ ++++++ R EYR S + K + + I Sbjct: 232 VLASGTITDEKKTLLGYTLGAGVDF-AMTDNVILRTEYRYSDFGKKKFVKDAIETNYKTN 290 Query: 198 --SLGVGMKF 205 +GV KF Sbjct: 291 DFRVGVAYKF 300 >gi|121602865|ref|YP_989466.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis KC583] gi|120615042|gb|ABM45643.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis KC583] Length = 300 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 87/310 (28%), Gaps = 120/310 (38%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + V S AL S +AQAAD + +P + + G Y G Sbjct: 3 IKCLVTASVCALISASAAQAADVM----------IPQEISPIISAPTFSWTGLYLGGQIG 52 Query: 64 ----------------YNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV- 105 + + + G ++AG N++ ++ GV+ D+ + Sbjct: 53 GLSGKHDFKAIGKDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEG 112 Query: 106 -----------------------------------LADNIHSLHGIGGSLRIRGGYEVSD 130 L N G+ R+R G+ +D Sbjct: 113 KLSSNHKAETQDDADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFG-AD 171 Query: 131 SLLLYATVGPDVAQKYETGKA--------------------------------------- 151 ++ Y + G Q G A Sbjct: 172 RIMPYVSGGVAYTQVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALD 231 Query: 152 -------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI------- 197 + +G T G GV+ ++++++ R EYR S + K + + I Sbjct: 232 VLASGTITDEKKTLLGYTLGAGVDF-AMTDNVILRTEYRYSDFGKKKFVKDAIETNYKTN 290 Query: 198 --SLGVGMKF 205 +GV KF Sbjct: 291 DFRVGVAYKF 300 >gi|39933549|ref|NP_945825.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas palustris CGA009] gi|39647395|emb|CAE25916.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris CGA009] Length = 736 Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 68/195 (34%), Gaps = 41/195 (21%) Query: 49 IRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG---SIFAGYNVEDS-CIMYG 94 +D++G Y G A Y + + + + AGG AGYN ++ G Sbjct: 113 PAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLLG 172 Query: 95 VEGDVRY-----------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV- 142 VE D+ + N G++R R G ++ L Y T G Sbjct: 173 VEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGV-IAGRWLGYVTGGLAFE 231 Query: 143 -AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------ 189 + G + IG AG GVE G + + AR+EY S+Y Sbjct: 232 HERYLTDPDVGRVMNARIGWAAGAGVEY-GFTPNWSARVEYLYSQYQNATVDLPTGASYA 290 Query: 190 VEGFYNTISLGVGMK 204 T+ +GV K Sbjct: 291 TSLNLQTVRVGVNRK 305 >gi|15420178|gb|AAK97311.1|AF308169_1 Pap31 [Bartonella henselae phage 60457] Length = 239 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 77/252 (30%), Gaps = 92/252 (36%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72 +AL S +AQAAD + V +A + G Y G G+F + Sbjct: 1 IALISPSAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48 Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVP-------- 104 G I+AG N++ ++ GVE D + Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSA 108 Query: 105 -----------------------------------VLADNIHSLHGIGGSLRIRGGYEVS 129 D++ G+ R+R G+ + Sbjct: 109 KVIREDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAA 168 Query: 130 DSLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLS 173 D ++ Y G V+ T A + T +G T G GV+ ++ Sbjct: 169 DRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMT 227 Query: 174 ESLVARLEYRAS 185 ++++ R EYR S Sbjct: 228 DNVLLRAEYRYS 239 >gi|85713475|ref|ZP_01044465.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A] gi|85699379|gb|EAQ37246.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A] Length = 668 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 69/184 (37%), Gaps = 34/184 (18%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE---------EAHHNAGG---SIFAGY 84 +PT A + G Y G A + G ++ GG + AGY Sbjct: 37 SIPTKAVPH---PIIQWTGLYLGAHAGFGGGRSTATLADPAPITTGNDFGGLISGVQAGY 93 Query: 85 NVEDSC-IMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRGGYEVSDSL 132 N++ ++ GVE D+ + + ++ ++ GS R R GY + Sbjct: 94 NLQLPSGLLLGVETDISFPSYIESNSFVSKLATARSDVTHQWDFIGSARGRIGYA-TGPW 152 Query: 133 LLYATVGPDVA--QKYETGKAGEITPIA---IGGTAGVGVEVGGLSESLVARLEYRASKY 187 L YAT G +A + +G+ +G AG G+E + ARLEY ++ Sbjct: 153 LTYATGGLAIAGERYLNDPPSGDREKTLGSRLGWVAGAGLEY-AFAPHWSARLEYLYYQF 211 Query: 188 SKVE 191 K Sbjct: 212 DKTN 215 >gi|90426297|ref|YP_534667.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18] gi|90108311|gb|ABD90348.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18] Length = 251 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 80/233 (34%), Gaps = 41/233 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K L V+ +A+A+ A AAD T A +++ G Y G Sbjct: 22 MKKFLLGT-VALVAMATTVPALAADL--------GARTYTKAPAYVAAPIYNWTGFYIGG 72 Query: 61 SALYNGSFGEEAHHNAG----------GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADN 109 G+F + G G + GY+ + + GVE + Sbjct: 73 HVG--GAFVGDDSIGTGATRSSDGTFLGGVQGGYDYQFAPNWVLGVEAQYSWLDQGTDPV 130 Query: 110 IHSLHGIG------GSLRIRGGYEVSDSLLLYATVGPDVAQ----KYETGKAGEITPIAI 159 + + GS+ R GY LLYA G A G ++ + Sbjct: 131 LVGPYSFSDKQKGLGSVTGRIGYTW-GPALLYAKGGYAFADYDTTVTLGGVGAAVSSKSD 189 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVE-------GFYNTISLGVGMKF 205 G T G G+E +++ ++EY+ + V+ + + G+ +F Sbjct: 190 GYTVGAGLEYL-FAQNWSGKVEYQYYDFGNVDFGGFSFKNDEHVVKAGLNYRF 241 >gi|146340936|ref|YP_001205984.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] gi|146193742|emb|CAL77759.1| putative outer-membrane protein, putative secreted protein [Bradyrhizobium sp. ORS278] Length = 217 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 76/233 (32%), Gaps = 44/233 (18%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ LA + A PT + + G Y G Sbjct: 1 MKKILLATVALAALAAPAA------------AADLAARPTYTKAPVLAPVPTWAGFYLGA 48 Query: 61 SALY----NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA--------- 107 Y NG AGG+I GYN + +YG+E D + + Sbjct: 49 FGGYATTDNGGVLSPKGGFAGGTI--GYNWQSGAWVYGLEADAAWADIKDSVGGVVPGFG 106 Query: 108 -DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITPIAIGGT 162 I S G+ R R GY +++LLY T G A T G T G T Sbjct: 107 AVGIASKIDATGTARGRVGYAF-NNVLLYGTGGYAWANNKITLSALGVGVSDTQFLSGWT 165 Query: 163 AGVGVEVGGLSESLVARLEYRASKYSKVEGF----------YNTISLGVGMKF 205 AG GVEV + + EY + F +++ +GV F Sbjct: 166 AGGGVEVL-FAPKWSVKAEYLYKSFDGKTYFGGALPTGNLNLHSVQVGVNYHF 217 >gi|15420176|gb|AAK97310.1|AF308168_1 Pap31 [Bartonella henselae phage 60457] Length = 245 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 86/251 (34%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 S +AL S +AQAAD + V +A + G Y G S E Sbjct: 5 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVGNFSSKVE 55 Query: 71 EAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV---------- 103 G I+AG N++ ++ GVE D + Sbjct: 56 ITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAE 115 Query: 104 ---------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130 D++ G+ R+R G+ +D Sbjct: 116 AIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAAD 175 Query: 131 SLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSE 174 ++ Y G V+ T A + T +G T G GV+ +++ Sbjct: 176 RIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDF-AMTD 234 Query: 175 SLVARLEYRAS 185 +++ R EYR S Sbjct: 235 NVLLRAEYRYS 245 >gi|27379826|ref|NP_771355.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27352979|dbj|BAC49980.1| blr4715 [Bradyrhizobium japonicum USDA 110] Length = 283 Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 72/252 (28%), Gaps = 75/252 (29%) Query: 1 MQKLFLAVGVSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYA 58 M+ V +A+ + +A AAD PT +NG Y Sbjct: 1 MKNFEKLVLAGVVAVGAAWGTAHAADLA-----------PTYKMPVKAIAPVQTWNGFYV 49 Query: 59 GLSALYNGSFGEE------------------------------AHHNAGGSIFAGYNVE- 87 G + Y+ S G + G + AGYN + Sbjct: 50 GGNVGYDWSTGSTGISVLSTDPALAAPLAALVAAGSFPTALSPSAKGVIGGVQAGYNWQV 109 Query: 88 DSCIMYGVEGDVRYT--------------VPVLADNIHSLHGIGGSLRIRGGYEVSDSLL 133 + G+E D + + + G++R R G V+ L Sbjct: 110 APQWLVGLEADFQGADVKGTTTQALAPVGFDATSTTVSKGIDWFGTVRGRVGVLVAPQWL 169 Query: 134 LYATVGPDVAQKYET----------------GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 LY T G + + +G + + G TAG G EV + + Sbjct: 170 LYGTGGFAYGRTKSSFSTTDVTGGCIVGATICASGASSGTSTGWTAGAGTEV-MFAPNWS 228 Query: 178 ARLEYRASKYSK 189 + EY + Sbjct: 229 FKAEYLYVDLGR 240 >gi|86747693|ref|YP_484189.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas palustris HaA2] gi|86570721|gb|ABD05278.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris HaA2] Length = 661 Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 62/171 (36%), Gaps = 29/171 (16%) Query: 48 PIRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG---SIFAGYN-VEDSCIMY 93 D++G Y G A Y + +F +GG AGYN + + +++ Sbjct: 40 SPAMDWSGFYVGAHAGYVRGHADARLQDPTFAASQSSGSGGVTAGAQAGYNILTRAGVLF 99 Query: 94 GVEGDVRY-----------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 GVE D+ + G+LR R G + L Y T G Sbjct: 100 GVEADISFPSYLPANAVLSEFDNATSTAQQHIDFYGTLRARLGVA-AGRWLGYVTGGLAY 158 Query: 143 A--QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 + AG++ IG AG G+E G + + AR+EY S + Sbjct: 159 EHERYLTEPGAGKVLNGRIGWAAGAGLEY-GFTPNWSARIEYLYSDFGNAS 208 >gi|49474419|ref|YP_032461.1| hemin binding protein E [Bartonella quintana str. Toulouse] gi|21689909|gb|AAM68132.1| hemin-binding protein E [Bartonella quintana] gi|49239923|emb|CAF26323.1| Hemin binding protein E [Bartonella quintana str. Toulouse] Length = 299 Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 78/302 (25%), Gaps = 112/302 (37%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63 + S A QAAD + V+P + + G Y G Sbjct: 6 IIGSVFAFIPASVVQAADVI--VPQQSEQVIPPVIA----SPPFSWTGFYFGGQIGGFSS 59 Query: 64 ------------Y--NGSFGEEAHHN----------------AGGSIFAGYNVEDSC-IM 92 Y N F +E N G + G N+E + Sbjct: 60 KISAMTSDVASPYVDNLFFPDEESKNKKWVSVEKKYMPELSGFIGGGYTGANLELGNGFI 119 Query: 93 YGVEGDVRYTVPVLADNI------------------------------------------ 110 GVE D+ + + Sbjct: 120 LGVETDILVSKRKDTKTVVFSDKSDQKITLVEGTKGETDGHTEEDSLGQLIGVSRLKEAE 179 Query: 111 --------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-----------TGKA 151 G+ R+R G+ V ++ Y + G Q + Sbjct: 180 ENSLTVSHTLKQKWTGATRVRVGFPVE-RMMPYISGGVAYGQFQDIFSMSITGEDADFTT 238 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGM 203 + T IG T G GV+ +++ + R EYR S + K + N +GV Sbjct: 239 VDDTKAMIGYTLGGGVDF-AMTDHFIVRAEYRYSDFGKKKFQERIELNYKTNDFRVGVAY 297 Query: 204 KF 205 KF Sbjct: 298 KF 299 >gi|156739568|gb|ABU93444.1| Omp25 [Brucella melitensis] gi|156739602|gb|ABU93461.1| Omp25 [Brucella suis] Length = 66 Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 + G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 LEVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA 59 Query: 170 GGLSESLV 177 L+++++ Sbjct: 60 -KLTDNIL 66 >gi|15420170|gb|AAK97307.1|AF308165_1 Pap31 [Bartonella henselae phage 60457] Length = 243 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 86/251 (34%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 S +AL S +AQAAD + V +A + G Y G S E Sbjct: 3 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVGNFSSKVE 53 Query: 71 EAH----------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV---------- 103 G I+AG N++ ++ GVE D + Sbjct: 54 ITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAE 113 Query: 104 ---------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130 D++ G+ R+R G+ +D Sbjct: 114 AIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAAD 173 Query: 131 SLLLYATVGP------DVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSE 174 ++ Y G V+ T A + T +G T G GV+ +++ Sbjct: 174 RIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDF-AMTD 232 Query: 175 SLVARLEYRAS 185 +++ R EYR S Sbjct: 233 NVLLRAEYRYS 243 >gi|260466904|ref|ZP_05813087.1| porin [Mesorhizobium opportunistum WSM2075] gi|259029300|gb|EEW30593.1| porin [Mesorhizobium opportunistum WSM2075] Length = 238 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 73/209 (34%), Gaps = 56/209 (26%) Query: 51 HDFNGPYAGLSALYNG-------SFGEEAHHNAG---------GSIFAGYNVEDSC-IMY 93 ++++G Y G A Y +F + + G G ++AG N + ++ Sbjct: 32 YNWSGAYIGAQAGYAWANARVGQTFAPGSFDDYGWGYNPSGGFGGLYAGVNHQFDSGLVL 91 Query: 94 GVEGDVRYTVPVLAD------------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 G+E D + GSLR+R GY V D L + T G Sbjct: 92 GIEADYSFAGVKDTTHYRALGVDDPAFGGELKLDTVGSLRLRAGYAV-DRWLPFVTGGLA 150 Query: 142 VAQKY-------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK----- 189 VA + ++ G T G G E ++++ + R EYR + + + Sbjct: 151 VASYKHTTVNLPGSTPYADVKGTVAGYTLGAGAEY-AVTDNWLVRGEYRFADFGRHTSVR 209 Query: 190 -------------VEGFYNTISLGVGMKF 205 V+ + + +GV KF Sbjct: 210 HSLVNGAPLNPDAVDLTTHDLRIGVAYKF 238 >gi|154244432|ref|YP_001415390.1| porin [Xanthobacter autotrophicus Py2] gi|154158517|gb|ABS65733.1| porin [Xanthobacter autotrophicus Py2] Length = 283 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 68/249 (27%), Gaps = 77/249 (30%) Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------- 69 F + AA V + + P + G Y G +A Y + G Sbjct: 5 FVAVFAA-SVMSGAACAADLAVAVTKAPPAPASFSWTGFYIGGNAGYAWNSGTLDGVGYI 63 Query: 70 -----------------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD---- 108 ++ G AGYN + + G E D+ Y Sbjct: 64 YGSDYGSYSNGWFNGQRSSESNSFTGGAQAGYNYQIGRAVLGFEADINYADASKTYAASS 123 Query: 109 ----------------------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 + + G++R R G D LL+YAT G + Sbjct: 124 TYDLYPYPVDRPDYNYHLREQLDASASVEWFGTIRARLGVTALDRLLVYATGGAAYGKVS 183 Query: 147 ET------------------------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 + G G + + G T G G+E +++++ + EY Sbjct: 184 GSGSYSWREYGFWWGGPGDHAFDRSGGFGGTDSSVRWGWTVGGGLEY-AITDNITVKGEY 242 Query: 183 RASKYSKVE 191 + Sbjct: 243 LYVDLGSND 251 >gi|27383307|ref|NP_774836.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27356481|dbj|BAC53461.1| bll8196 [Bradyrhizobium japonicum USDA 110] Length = 278 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 69/249 (27%), Gaps = 69/249 (27%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 ++L LA ++ +A + AAD P + V + G Y G S Sbjct: 5 KQLSLASIIAFGTIAFGSGSLAADLP---------AAPVVKAPAPVYPLFSWTGGYIGGS 55 Query: 62 ALYNGSFGEE----------------------------------AHHNAGGSIFAGYNVE 87 + + G + AGYN + Sbjct: 56 VGSGWGTSQTDLAVGNTFIGAPVNQTVNQLIGGTADLNVPLPQVQLNGFLGGVQAGYNFQ 115 Query: 88 DSCIMYGVEGDVRYTVPVLAD------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 ++YGVE D ++ N + + R G V D L+Y G Sbjct: 116 SGVMVYGVESDFLWSGIKGRTGCFVVLNCTNDTKWIADITGRVGVTVGDRGLVYIKGGAA 175 Query: 142 VAQKYE-------------------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 A G T GGT G G+E L A++EY Sbjct: 176 WADSSIGINQSFAVTSNLGAGFAANGAADGRATKNIFGGTLGAGIEYAFL-PGWSAKVEY 234 Query: 183 RASKYSKVE 191 + + + Sbjct: 235 DYFDFGRQD 243 >gi|75674443|ref|YP_316864.1| outer membrane protein [Nitrobacter winogradskyi Nb-255] gi|74419313|gb|ABA03512.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255] Length = 241 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 75/227 (33%), Gaps = 38/227 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ LA V+ L +A+ AQAAD R + VP +++ G Y G Sbjct: 18 MKKILLA-SVAFLGMAAIVPAQAADLAPRPYTKAPPYVPA--------PIYNWTGFYLGG 68 Query: 61 SALYNG---------SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNI 110 F G GY+ + ++G+E L Sbjct: 69 HIGGAFGGPGNVLAPGFFNNNDGAFMGGGQVGYDTQFSPNWVFGIEA----NYSFLDTGS 124 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 + GS+ R GY LLY G A T G T G G+E Sbjct: 125 FFANRGLGSVTARLGYTW-GPALLYVKGGYGWADSRFTNGF-AGNGGRDGYTVGGGLEYL 182 Query: 171 GLSESLVARLEYRASKYSKV------------EGFYNTISLGVGMKF 205 +++ ++EY+ V +T+ +G+ +F Sbjct: 183 -FTQNWSGKVEYQYYDLGNVNFFGPLGGIGNFRNDQHTVKVGLNYRF 228 >gi|158425350|ref|YP_001526642.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans ORS 571] gi|158332239|dbj|BAF89724.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans ORS 571] Length = 233 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 51 HDFNGPYAGLSALYNGS----------FGEEAHHNAG--GSIFAGYNVED-SCIMYGVEG 97 + G Y G +A + G FG +++G GYN + + ++ G+E Sbjct: 40 FSWTGFYIGANAGFGGDKYNYDFGAPGFGSATANSSGFFAGGQLGYNYQFANNVVLGLET 99 Query: 98 DVRYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-- 146 D++++ N++S G++R R GY D L Y T G + Sbjct: 100 DIQWSGIEGDTTLASGGSVANLNSSLDYFGTVRARVGYAF-DRFLPYITGGFAYGESKTS 158 Query: 147 ------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------K 189 T GE + G T G GVE + + + EY Sbjct: 159 ITTITPTTLTFGEGSGTKTGWTLGGGVEY-AFTNNWTFKTEYLYVDLDDSNYGVGAGAVN 217 Query: 190 VEGFYNTISLGVGMKF 205 V+ ++T+ G+ KF Sbjct: 218 VDNKFHTVKAGINYKF 233 >gi|121602037|ref|YP_989465.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis KC583] gi|120614214|gb|ABM44815.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis KC583] Length = 284 Score = 85.1 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 79/290 (27%), Gaps = 91/290 (31%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ +L+V + L S AAD V +++ + P + G Y G Sbjct: 1 MKMRYLSVLFG-ITLGSSSVVNAADVVVINKTEEEA---PASSSVFTPADLSWTGVYLGG 56 Query: 61 SAL----------YNGSFGEEAHH-------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 Y+ + G ++ G N++ + GVE D ++ Sbjct: 57 QISGFSSKVDIDRYSDNTWSSVEKSLLPEISGFSGGLYVGSNIDLGEGFILGVETDALWS 116 Query: 103 VPVLADNIHSL------------------------------------------------H 114 + + Sbjct: 117 NTGDKKTLPTKKVGAAHRLEAAERNREDEVVQERRVAAANNSAKAPEANVRMTGEYALRQ 176 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAG 164 G+ R R G+ V + Y T G Q + + + +G G Sbjct: 177 QWIGATRARVGFAVE-RFMPYVTGGLAYGQLRGVNLLALATNNTENSEKEEKLMVGYAVG 235 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205 G++ +S ++ R EYR S K + N +GV KF Sbjct: 236 AGLDF-AVSSNIFLRTEYRFSDLGKKKFANEKIEVNYKINDFRVGVAYKF 284 >gi|163869043|ref|YP_001610277.1| hemin binding protein [Bartonella tribocorum CIP 105476] gi|161018724|emb|CAK02282.1| hemin binding protein [Bartonella tribocorum CIP 105476] Length = 296 Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 81/299 (27%), Gaps = 97/299 (32%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRY----VPIRHDFNGP 56 M+ +S + +AQAAD V P+ ++R V ++G Sbjct: 1 MKT-KCLFVLSLFTFMTTSTAQAADTVISQQSQPSVSAPSSLSSRLSPVTVSAPFSWSGF 59 Query: 57 YAGLSALYNGSFG--------------------EEAHHNAGGSIFAGYNVEDSC-IMYGV 95 Y G + S +AG N++ ++ Sbjct: 60 YFGGQLGHLSSKSTLNYAPESQGGKWALVDRGLSPKPTGFVAGFYAGSNIDLGNSLVVSF 119 Query: 96 EGDVRYTVPVLADNIHSL------------------------------------------ 113 + D+ ++ + Sbjct: 120 DTDMIWSGKKNTQTDNGKKILDKLDSVHAAFHDAGIPIITSEVQDETIPNYSDIIVSSVT 179 Query: 114 --HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ----------------KYETGKAGEIT 155 G+ R R G+ S L+ Y G Q + +G + T Sbjct: 180 LKEKWAGAARARIGFA-SHRLMPYIAGGVAYTQMQYILSLLTKSQEDSTVFASGDVFDKT 238 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKY---------SKVEGFYNTISLGVGMKF 205 IG T G G + +++ ++ R EYR + + K+ + LG+ KF Sbjct: 239 KTMIGYTVGGGFD-LAMTDDIIMRTEYRYTDFFKQKFANDELKMSVQTHNFRLGIAYKF 296 >gi|83956056|ref|ZP_00964538.1| outer membrane protein [Sulfitobacter sp. NAS-14.1] gi|83839622|gb|EAP78801.1| outer membrane protein [Sulfitobacter sp. NAS-14.1] Length = 199 Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 33/193 (17%) Query: 45 RYVPIRHDFNGPYAGLSALY-----------------NGSFGEEAH-HNAGGSIFAGYNV 86 + G Y G + Y NG + ++ AGY+ Sbjct: 8 AEQAPAPAWTGGYVGGNISYGFGSLDANDDLASALTTNGFSDNLSEPDGVSAALRAGYDW 67 Query: 87 EDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYATVG 139 + ++G+ + + + + I + G+ ++ RGGY V D+ L Y +G Sbjct: 68 QFGRGVFGLGAEYNFGSYDGDGEGILAGSGVDVEIQDMATIFARGGYLVKDNFLAYGLLG 127 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----- 194 A+ + + G T G G E +++ EY + + V+ Sbjct: 128 YSQAEGEVSLGGDSESEDLDGVTIGFGGEY-MFTQNWTGYAEYTYTDFGDVDNTDGQLEA 186 Query: 195 --NTISLGVGMKF 205 I GV +F Sbjct: 187 DLQQIKFGVNYRF 199 >gi|91977250|ref|YP_569909.1| hypothetical protein RPD_2780 [Rhodopseudomonas palustris BisB5] gi|91683706|gb|ABE40008.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 570 Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 71/220 (32%), Gaps = 55/220 (25%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 +S++ AS +A AAD R P A ++ G Y G G Sbjct: 8 LSAVLFASCGTAHAADIAR----------PPAADPI---AALNWTGFYLGAHLG-AGFGT 53 Query: 70 EEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------------VRY 101 + + G SI+ AGYN + + GVE D + Y Sbjct: 54 TKVDNPYGPSIYGDTVRVPKALAGLQAGYNWQAPGTAWVLGVEADASALDADGTDTCLAY 113 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV----------AQKYETG 149 + ++ N + G+L R G+ L+Y G A Y Sbjct: 114 SGQFVSANCRVREHVLGTLTGRIGHAFGSQGRSLMYVKGGAAFLTSDLTMTTNAVDYLNR 173 Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 A E+ G T G G+E LS R EY + + Sbjct: 174 PAAELKETRWGWTVGAGIE-HALSSGWAVRAEYDYADFGT 212 >gi|296445473|ref|ZP_06887430.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] gi|296257039|gb|EFH04109.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] Length = 210 Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 25/174 (14%) Query: 50 RHDFNGPYAGLSALY-----NGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTV 103 + G Y GL+A NG G+ + GG I GYN++ + G+E D + T Sbjct: 41 VFSWTGAYVGLNAGGAFKADNGLGGDYSGVVGGGQI--GYNLQLSPLFVVGLETDFQGTS 98 Query: 104 PVLAD--NIHSLHGIGGSLRIRGGYEVSDS-LLLYATVGPDVAQKYETGKAGEITPIAIG 160 G++R R G + DS LL Y T G + A + G Sbjct: 99 LSRNTWFGQQVSLPWFGTVRGRVGVTLFDSQLLAYGTGGFAYGEVK----APWSSDTHTG 154 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEG---------FYNTISLGVGMKF 205 TAG GVE L + A++EY + G ++T+ GV F Sbjct: 155 WTAGGGVEWAFL-PNWSAKVEYLYTDLQNNSGWGWVAPQRAKFHTVRAGVNYHF 207 >gi|319406584|emb|CBI80226.1| Hemin binding protein C [Bartonella sp. 1-1C] Length = 304 Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 84/315 (26%), Gaps = 121/315 (38%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M + + S +AL + +AQAAD G V V + G Y G Sbjct: 1 MNNMKCLITASVVALMTASAAQAADIKVPQEIGETIV---------VAPAFSWTGFYLGG 51 Query: 61 SALYNGSFGEEAH--------------------HNAGGSIFAGYNVEDSC-IMYGVEG-- 97 S + G +AG NV+ ++ GV+ Sbjct: 52 QIGGFSSKTSFSSLADGDSKKWFPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDV 111 Query: 98 -------------------DVRYTVPVLADNIHS-------------------------- 112 D VP A + + Sbjct: 112 VFSGRKDTRNDTMTSELGKDKNNNVPTGAKDNGNPKPEKEPGKEPGKEPEKEPEKESDVK 171 Query: 113 --------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE----------------- 147 G+ R+R G+ +D ++ Y G Q + Sbjct: 172 FTKYDHTLKAKWAGATRVRIGFA-ADRIMPYVAGGVAYTQLQDTFTTLTGIQKIPVQKAD 230 Query: 148 --------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY----- 194 + + IG T GV+ ++++++ R EYR S + K + Sbjct: 231 GKDEETSGKSNTVDESKTMIGYTLAAGVDF-AMTDNVLLRAEYRYSDFGKKKLHNDKFEV 289 Query: 195 ----NTISLGVGMKF 205 N +GV KF Sbjct: 290 NYKANDFRVGVAYKF 304 >gi|156739550|gb|ABU93435.1| Omp25 [Brucella abortus] gi|156739554|gb|ABU93437.1| Omp25 [Brucella abortus] gi|156739570|gb|ABU93445.1| Omp25 [Brucella melitensis] Length = 65 Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 EVKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA- 58 Query: 171 GLSESLV 177 L+++++ Sbjct: 59 KLTDNIL 65 >gi|192288904|ref|YP_001989509.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris TIE-1] gi|192282653|gb|ACE99033.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris TIE-1] Length = 689 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 29/170 (17%) Query: 49 IRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG---SIFAGYNVEDS-CIMYG 94 +D++G Y G A Y + + + + AGG AGYN ++ G Sbjct: 66 PAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLLG 125 Query: 95 VEGDVRY-----------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV- 142 VE D+ + N G++R R G ++ L Y T G Sbjct: 126 VEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGV-IAGRWLGYVTGGLAFE 184 Query: 143 -AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 + AG + IG AG GVE G + + R+EY S+Y Sbjct: 185 HERYLTDPDAGRVMNARIGWAAGAGVEY-GFAPNWSVRIEYLYSQYQNAS 233 >gi|307946127|ref|ZP_07661462.1| putative outer membrane protein [Roseibium sp. TrichSKD4] gi|307769791|gb|EFO29017.1| putative outer membrane protein [Roseibium sp. TrichSKD4] Length = 256 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 26/193 (13%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + + ++ A+AAD V P + + V + G Y G A + + Sbjct: 44 LVMCAVLGGLVAGAKAAD----MPVYDDFVTPNLPSAGSV-----WEGGYVGAEAGLSQT 94 Query: 68 FGEE---------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN------IHS 112 E + +A +F GYN + S ++ GVE Y N + + Sbjct: 95 LTESKVPGAKSTASKMDAAFGLFGGYNWQVSRVVLGVEAGATYLGGQAKKNLSGVGQVKA 154 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGL 172 SLR R G S + Y T G + + +G G G+EV + Sbjct: 155 GSQWSASLRGRVGLPFE-SFMPYLTAGLAATDHSTKANGKTHSALGVGLMFGGGLEV-AV 212 Query: 173 SESLVARLEYRAS 185 SE+ R +Y + Sbjct: 213 SENWRVRADYSMT 225 >gi|319408966|emb|CBI82625.1| Hemin binding protein E [Bartonella schoenbuchensis R1] Length = 303 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 24/115 (20%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPD-------------VAQKYETGKAGEITPIAI 159 G+ RIR G+ +D ++ Y G E + T I Sbjct: 191 NQKWTGATRIRIGFA-ADRIMPYIAGGVAYGQFQNILSLSSTATHDKELNNMSDETKTMI 249 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL---------GVGMKF 205 G T G G++ +++ ++ R EYR S + K + ++ L GV KF Sbjct: 250 GYTFGAGIDF-AMTDDIILRAEYRYSDFGKKKFAKDSFELHYKTNDFRAGVSYKF 303 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + S LA+ QAAD + + GV P + P +NG Y G Sbjct: 4 KCLIATSIFTLAAISLVQAADSIVFKENYKMGVSPIVR-----PPTFSWNGFYIGGQVG 57 >gi|240849918|ref|YP_002971307.1| hemin binding protein B [Bartonella grahamii as4aup] gi|240267041|gb|ACS50629.1| hemin binding protein B [Bartonella grahamii as4aup] Length = 582 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 75/272 (27%) Query: 7 AVGVSSLALASFCSAQAADPVRR---AHHGGRGVVPTIA--------TNRYVPIRHDFNG 55 + SS+ + A A + VP+ ++ + +G Sbjct: 313 TLVKSSVTAPAVQPAAKAPTSVQSASQPSTAEKTVPSAPLVLARSGSSSEPAKASNGTSG 372 Query: 56 PYAGLSALYNGSFGEE-----------------------AHHNAGGSIFAGYNVEDSCIM 92 G +GS + A + GG AG+ + + + Sbjct: 373 AQNGAHHGAHGSGSDANPHGASHGGGHGSGAHAHGANPHASRSHGGQNMAGHGAQSTQAV 432 Query: 93 -------YGVE------GDVRYTVPVLADNIHS--LHGIGGSLRIRGGYEVSDSLLLYAT 137 YG+E ++ + ++ GG+ R+R G+ +D + Y Sbjct: 433 DKNNSSVYGIEQMKRVASELGLDQEDEVETLNHTFKQNWGGATRVRIGFA-ADRFMPYLA 491 Query: 138 VGPDVA---------------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 G + + + T IG T G GV+ L ++++ R EY Sbjct: 492 GGIAYGQFQDTISISVKDEDGRVVSSKNLADETKTMIGYTLGGGVDFSVL-DNVIVRAEY 550 Query: 183 RASKYS---------KVEGFYNTISLGVGMKF 205 R S + +V N +GV KF Sbjct: 551 RYSDFGKKKFAKEKFEVNYKTNDFRVGVAYKF 582 Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 30/135 (22%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + S +L S +A AAD + ++ V + G Y G+ A G Sbjct: 6 LITASIFSLISTSTALAADVM------IPHQPAPSTSSAIVAPTFSWTGLYLGVQA---G 56 Query: 67 SFGEEAH--------------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPV 105 F ++ G +AG N++ ++GV+ D+ + Sbjct: 57 GFSSKSDMALVDQEKNLPLDKEFSPKLSGFVGGFYAGSNIDLGDNFIFGVDTDLMISGKK 116 Query: 106 LADNIHSLHGIGGSL 120 I ++ Sbjct: 117 HTKTITIGAADNTTV 131 >gi|296446453|ref|ZP_06888397.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] gi|296256088|gb|EFH03171.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] Length = 210 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 63/194 (32%), Gaps = 28/194 (14%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K A+ + + LA +AAD P + ++G YAGL Sbjct: 1 MRKTVSALASTFVLLAG--DVRAADL-----------PPQATVFGGARPAYAWSGVYAGL 47 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHS----LHG 115 + S G GYN + G+E D + T + Sbjct: 48 NLGAGLSASGLDRSGILGGGQLGYNYRLGPLFVVGLETDFQGTSLGGDSGRYGFPSPRFD 107 Query: 116 IGGSLRIRGGY-EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ R R G SD LL + T G + + G TAG G+E + Sbjct: 108 WFGTARGRVGVLPFSDHLLFFGTGGYAYGH--------DGDRMHDGWTAGGGLEWAFARD 159 Query: 175 SLVARLEYRASKYS 188 + EY + + Sbjct: 160 -WSVKAEYLYTDFG 172 >gi|86751713|ref|YP_488209.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86574741|gb|ABD09298.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 449 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 46/175 (26%), Gaps = 30/175 (17%) Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAH------------HNAGGSIFAGYNVEDSCIMYG 94 P ++ G Y G + + G GYN + S ++G Sbjct: 242 TPPPANWAGLYLGGNFGGATARNRTTSSVIFSENFNLSPDGFVGGGQIGYNWQASNWVFG 301 Query: 95 VEGDVRYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 E D + + + G+ R R GY V S L YAT G Sbjct: 302 AEADFQGSTQKDDRAAVLSSLLLYNQKLPWFGTARARLGYTV-GSTLFYATGGYAYGNVK 360 Query: 147 ETGKAGEITPIAI----GGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG 192 G G GVE L + ++ EY Sbjct: 361 TNVVTAFSNETFNRSRSGYAVGAGVETPFQLFGLLGPNWTSKTEYLYVDLGSTTD 415 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 70/216 (32%), Gaps = 46/216 (21%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + V + S SAQAAD +A + + +D+ G Y G + Sbjct: 4 ILVGVALIGSAVSAQAADLAVKAPYLK----------APIAAVYDWTGFYIGANVGVGLG 53 Query: 68 FGEEAHHNAGGSI-------------FAGYNVED-----SCIMYGVEGDVRYTV------ 103 + H G + GYN + ++ GVE D++ + Sbjct: 54 RDLQTHAVPAGGVASHLSPQGVIGGGQIGYNWQSNTTFLGPLLIGVEADIQGSGMTDGHT 113 Query: 104 ----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--ETGKAG----E 153 P+ A N + ++R R G V ++ Y T G A T G Sbjct: 114 TLSSPLGAANYNQKLDWFTTVRGRVGL-VRGPVVGYFTGGFAAANVKTTVTQIGGIVPFA 172 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + G T G GVE + + ++EY Sbjct: 173 FSETRTGWTIGSGVEA-AIGGNWTGKIEYLYLDLGN 207 >gi|300024536|ref|YP_003757147.1| porin [Hyphomicrobium denitrificans ATCC 51888] gi|299526357|gb|ADJ24826.1| porin [Hyphomicrobium denitrificans ATCC 51888] Length = 232 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 63/194 (32%), Gaps = 37/194 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH-------------------NAGGSIF 81 A + + GPY G + Sbjct: 13 AAATPVLAGEPSWTGPYIGAHVGGAWGNASTTDDPRDWGNDPKFIGPFDQNPVGVIAGLT 72 Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH-----------GIGGSLRIRGGYEVSD 130 AGYNV+ S I+ GVEGD+ Y A + S GI G++ R G+ + Sbjct: 73 AGYNVQLSNIVLGVEGDIGYLGLDSALDTPSSQSGNHQSIVLDSGIYGAVTARAGFLATP 132 Query: 131 SLLLYATVGPDVAQKYETGKAGEI------TPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 S L+Y G T T G AG G+E L+++L ++EY Sbjct: 133 STLVYGKGGFAFYNGDATQSTTADGYVFHGTGTFTGWVAGGGIE-QRLTDNLSIKVEYLH 191 Query: 185 SKYSKVEGFYNTIS 198 + G +IS Sbjct: 192 FDFGSQAGDQTSIS 205 >gi|316934003|ref|YP_004108985.1| porin [Rhodopseudomonas palustris DX-1] gi|315601717|gb|ADU44252.1| porin [Rhodopseudomonas palustris DX-1] Length = 578 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 68/223 (30%), Gaps = 55/223 (24%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 ++ S LA+ C A AAD R ++ G Y G G Sbjct: 16 SIICVSAVLAASCGAHAADLPR-------------PPAAKAVAVWNWTGFYLGAHLG-AG 61 Query: 67 SFGEEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------------ 98 + + G SI+ AGY + + GVE D Sbjct: 62 FGTAKVDNPFGASIYGDTVRAPKALAGLQAGYTWQAPGSAWVLGVEVDASAIDADGTDTC 121 Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV----------AQKY 146 + Y+ ++ N + G+L R G+ LLY G A Y Sbjct: 122 LAYSGQFVSANCRIREHVLGTLTGRLGHAFGAQGRSLLYVKGGGAFLIGNLTMTTNASDY 181 Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 E+ G T G G+E L+ R EY + + + Sbjct: 182 LAQPGAELNATRWGWTVGAGIE-HALTPRWSVRAEYDYANFGR 223 >gi|156739548|gb|ABU93434.1| Omp25 [Brucella abortus] gi|156739556|gb|ABU93438.1| Omp25 [Brucella abortus] gi|156739560|gb|ABU93440.1| Omp25 [Brucella melitensis] gi|156739564|gb|ABU93442.1| Omp25 [Brucella melitensis] gi|156739578|gb|ABU93449.1| Omp25 [Brucella melitensis] gi|156739582|gb|ABU93451.1| Omp25 [Brucella melitensis] gi|156739584|gb|ABU93452.1| Omp25 [Brucella melitensis] gi|156739588|gb|ABU93454.1| Omp25 [Brucella melitensis] gi|156739592|gb|ABU93456.1| Omp25 [Brucella suis] gi|156739598|gb|ABU93459.1| Omp25 [Brucella suis] gi|156739620|gb|ABU93470.1| Omp25 [Brucella pinnipedialis] gi|156739622|gb|ABU93471.1| Omp25 [Brucella pinnipedialis] gi|156739624|gb|ABU93472.1| Omp25 [Brucella pinnipedialis] gi|156739626|gb|ABU93473.1| Omp25 [Brucella pinnipedialis] Length = 64 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 VKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58 Query: 172 LSESLV 177 L+++++ Sbjct: 59 LTDNIL 64 >gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13] gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13] gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653] gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13] gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653] Length = 212 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 26/220 (11%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 ++ A + +A SA AAD + + V HD++G Y G Sbjct: 3 KRSITAAAFGTAVMAFAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQ 54 Query: 62 ALYNGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGI 116 + S + A G I G N+++ I++G EG+ + Sbjct: 55 VGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSW 114 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 G+ + + GY D L+Y T G V + G G GVE LS L Sbjct: 115 NGNAKGKVGYAF-DKTLVYGTAGYGVTRFKAKENTTSAPGWEGGVLIGAGVE-QALSGPL 172 Query: 177 VARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 + EY +++ V+ ++I G+ +F Sbjct: 173 SVKAEYDFQRFNDVKSQVNGIEQRNNLKNHSIKAGLNYRF 212 >gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840] gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis] gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840] Length = 212 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + R + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGRTDYTYNDPVAAGP--------HDWSGNYVGTQVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 222 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 79 Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G E G+ + G+ + + GY D Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 138 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + + G G GVE LS L + EY +++ V+ Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSASGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 198 SQVNGIEQRNNLKNHSIKAGLNYKF 222 >gi|254470977|ref|ZP_05084380.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062] gi|211960119|gb|EEA95316.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062] Length = 228 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 29/184 (15%) Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYNVEDSCIMYGVEGDV 99 P +D++G Y G+ + G +N+G ++ GYN I+ GVEG+ Sbjct: 49 TPPEYDWDGFYLGVQGGWARLHGTNRFNNSGSQYNGGTVGLYGGYNYTYQNILIGVEGEG 108 Query: 100 RY--TVPVLADNIHSLHGIGGSLRIRGG--YEVSDSLLLYATVGPDVAQKYETGKA---G 152 Y + + +IR G Y+ + Y T G V+ + G Sbjct: 109 AYWAFGERSRGEMSLRSDYFAAAKIRAGLTYDW---FMAYVTGGAAVSTFRASNPNFGPG 165 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------KVEGFYNTISLGV 201 + +G G G+E ++E ++ RL+Y + K + + I LGV Sbjct: 166 TDSNTMLGWVGGAGLE-MFVTERIIVRLDYERIVFPGRSFTVGGTRFKEDIDSDAIRLGV 224 Query: 202 GMKF 205 KF Sbjct: 225 SYKF 228 >gi|39935611|ref|NP_947887.1| outer membrane protein [Rhodopseudomonas palustris CGA009] gi|39649464|emb|CAE27986.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 997 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 74/225 (32%), Gaps = 46/225 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + V S+ + SA AAD +A VP ++ G Y G Sbjct: 1 MKNFPAWLSVWSVVAVACGSAHAADLQN------------VAVPSAVPAATNWTGFYIGT 48 Query: 61 SALYNGS-------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 S G NA I GYN + + G+EGD + Sbjct: 49 HVGAAASESAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQFGNYVLGIEGDASF 108 Query: 102 -TVPVLADNIHSLHGIGG------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-- 152 ++ LA +H +L R GY D LL+Y G A + +G Sbjct: 109 GSINGLARCLHGTFACTSRIDELWTLAARFGYAAGD-LLVYGKAGAAWADVHRRMASGNF 167 Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 E + G G GVE L L A++EY + + Sbjct: 168 VNVLEASETRSGWLLGAGVEYAFL-PGLSAKIEYNYADFGNRSLT 211 Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 52 DFNGPYAGLSALYNGSFGEEAH----------HNAGGSIFAGY---NVEDSCIMYGVEGD 98 ++ G Y G S A + GG++ G N + ++ GVE Sbjct: 785 NWTGLYVGASVGAGWGRTTYADPFPTPTTGDRADLGGALLGGQIGANYQFGHLVAGVEAS 844 Query: 99 VRYTVPVLADNIHSLH------GIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQ 144 + D + G G+ RGGY + D LLY G + Sbjct: 845 ANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAIGAFTARGGYAI-DRTLLYVKGGAAWDR 903 Query: 145 KYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197 + + G T G T G G+E L+ S LEY+ + F ++ Sbjct: 904 QQDQFNTVGVGGTTLASTSTNWGWTVGGGLEY-ALAPSWSMALEYKYFDFGASPAFSTSV 962 Query: 198 S 198 + Sbjct: 963 T 963 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 66/217 (30%), Gaps = 49/217 (22%) Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA----------- 82 G V + + G Y G+ A G FG +A G++ A Sbjct: 240 GAASVSAAPLPGVPLPQWSWTGIYLGVHAG--GGFGSNDWDSATGALLAASTSGGFPGRG 297 Query: 83 -----------GYNVEDSCIMYGVEGDV------RYTVPVLADNI------HSLHGIGGS 119 G N + + GVE Y H+ G+ Sbjct: 298 DSSGLFGGGQIGANYQFGRWVAGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGT 357 Query: 120 LRIRGGYEVSDSLLLYATVGPD-VAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLS 173 + R G + LL+Y G + +AG + G G G+E LS Sbjct: 358 ITGRLGQTWGN-LLIYGKAGAAWATGSSDAQRAGSASRFTESGTRWGWVTGTGLEY-ALS 415 Query: 174 ESLVARLEYRASKYSK-----VEGFYNTISLGVGMKF 205 +L A +EY + V+ F N +G KF Sbjct: 416 PNLSAFVEYNHVDFGTQDTAYVDQFGNASEVGFKQKF 452 >gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457] gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str. Rev.1] gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M] gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1] gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457] gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M] gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9] gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28] gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90] Length = 212 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G E G+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|261317611|ref|ZP_05956808.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94] gi|265988645|ref|ZP_06101202.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1] gi|261296834|gb|EEY00331.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94] gi|264660842|gb|EEZ31103.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1] Length = 134 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 25/123 (20%) Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPI 157 L + S G++R R G + D + Y G + Sbjct: 14 LTTGVDSKLRWSGAVRARMGVAM-DRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKT 72 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTISLGVG 202 G AG GV+ +++++ RLEYR + Y + + I LGV Sbjct: 73 MTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVA 131 Query: 203 MKF 205 KF Sbjct: 132 YKF 134 >gi|323136250|ref|ZP_08071332.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC 49242] gi|322398324|gb|EFY00844.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC 49242] Length = 226 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-GS 67 + +A AA P A P P ++G Y G+ Y S Sbjct: 1 MKNKVAALLAPFVLAAGPSLSADLPRGAAPPPGDYVAP-PPAFVWSGFYVGVHGGYAFSS 59 Query: 68 FGEEAHHNAGG------SIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIGG-- 118 F ++A+ GG + GYN + GVE D +T ++ G Sbjct: 60 FEDDANTLIGGADGGLIGVTGGYNYMVTPQFLLGVEADFAFTGVSKSNAPFFGVIARGEV 119 Query: 119 ----SLRIRGGYEVSDSLLLYATVGPDVAQKYE------TGKAGEITPIAIGGTAGVGVE 168 +LR R GY + D LLY T G ++ TG G G G GVE Sbjct: 120 DDMFTLRGRAGYSI-DRALLYVTGGFAASKNAIGLTTPFTGFYGYQATFQPGWALGAGVE 178 Query: 169 VGGLSESLVARLEYRASKYSKVEGFY 194 ++ +L A+ EY + F Sbjct: 179 Y-MITSNLSAKGEYIFTSTGSDSYFD 203 >gi|121602149|ref|YP_989467.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis KC583] gi|120614326|gb|ABM44927.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis KC583] Length = 281 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 87/283 (30%), Gaps = 80/283 (28%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M K + + + +A++S QAAD V + + A + + G Y G+ Sbjct: 1 MNKKNVLLSLCVVAVSSPSLVQAADTVVVSRAVSKTQTAQNAMSVVDHSDLSWGGLYFGV 60 Query: 61 S-ALYNGSF--------GEEAHH--------NAGGSIFAGYNVEDSC-IMYGVEGDVRYT 102 +G+ GE+ G + G NVE ++ GV+ DV ++ Sbjct: 61 QVGGISGNLSLNRKAVSGEDKSSSETLPKLSGFIGGFYLGSNVEFGGGLVVGVDTDVVWS 120 Query: 103 -------------------------------------VPVLADNIHSLHGIGGSLRIRGG 125 +A N+ G+ RIR G Sbjct: 121 NQKYKQLSDPIHVDEEVLKLHQALMSDYGHNSNSLKIGDKIAYNVTRKTNWIGATRIRFG 180 Query: 126 YEVSDSLLLYATVGPDVAQKYETG--------------KAGEITPIAIGGTAGVGVEVGG 171 + ++ Y G Q T +G T G G E Sbjct: 181 LA-GERMMPYVAGGIAYTQLQVTPWFEVTPTKGEVSSIDFMNDKKTMVGYTLGAGFEFLM 239 Query: 172 LSESLVARLEYRASKYS---------KVEGFYNTISLGVGMKF 205 ++ ++ R EYR S + KV N + +GV KF Sbjct: 240 -TDDVILRTEYRHSDFGKKNFLKDTSKVSYKTNDVRIGVAYKF 281 >gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str. Ether] gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether] gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether] Length = 212 Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGGTDYTYYDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G E G+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|148258633|ref|YP_001243218.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146410806|gb|ABQ39312.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1] Length = 710 Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 66/192 (34%), Gaps = 25/192 (13%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF-GEEAH----- 73 A A R + + +D+ G Y G Y G G+++H Sbjct: 59 PAGADRLGTERRLDVRTKADRPPSEAEMKRVYDWTGFYVGGHFGYGGGRLGDDSHPKPEQ 118 Query: 74 --------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNI-----HSLHGIGGS 119 G GYN + + ++ GVE D +T P + +S G+ Sbjct: 119 GVFLPHSPTGLIGGFQVGYNRQLANHLVLGVEADASFTSPTDEPALAPSPFNSTVDYVGT 178 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI---AIGGTAGVGVEVGGLSESL 176 R R GY D + Y T G + G + G TAG+G E +S + Sbjct: 179 ARGRVGYAF-DRWMPYVTGGFAWGHGHIEVNDGSGAQLGRYQTGWTAGLGAEF-AVSGNW 236 Query: 177 VARLEYRASKYS 188 A++EY S Sbjct: 237 TAKVEYDYVNLS 248 >gi|156739526|gb|ABU93423.1| Omp25 [Brucella neotomae] gi|156739608|gb|ABU93464.1| Omp25 [Brucella ovis] Length = 63 Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 VKQGFEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58 Query: 172 LSESL 176 L++++ Sbjct: 59 LTDNI 63 >gi|92116045|ref|YP_575774.1| carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14] gi|91798939|gb|ABE61314.1| Carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14] Length = 692 Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 82/218 (37%), Gaps = 43/218 (19%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY----- 57 + V +S+LAL SA AAD G ++PT A R D+ G Y Sbjct: 36 VVLAGVALSALALGG--SAVAADV-------GASLLPTKAMPR---PVIDWTGLYFGAHA 83 Query: 58 -------AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADN 109 + G + + AGYN++ ++ G+E D+ + + +++ Sbjct: 84 GFGGGRSTATLVDPASTTGRNDYGGIISGVQAGYNIQLPSGLLLGLEADISFPNYIESNS 143 Query: 110 IHSL-----------HGIGGSLRIRGGYEVSDSLLLYATVGPD-VAQKYETG-KAGEITP 156 S GS R R GY + L YA+ G ++Y +G+ Sbjct: 144 DVSKLATARSAVTQQWDFIGSARGRIGYA-TGPWLTYASGGLAFAGERYLNDLPSGDQEK 202 Query: 157 IA---IGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 +G AG G+E + S ARLEY ++ K Sbjct: 203 ALDMRLGWAAGAGLEY-AFTPSWSARLEYLYYRFDKTN 239 >gi|39933882|ref|NP_946158.1| outer membrane protein [Rhodopseudomonas palustris CGA009] gi|192289301|ref|YP_001989906.1| porin [Rhodopseudomonas palustris TIE-1] gi|39647729|emb|CAE26249.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] gi|192283050|gb|ACE99430.1| porin [Rhodopseudomonas palustris TIE-1] Length = 449 Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 48/177 (27%), Gaps = 32/177 (18%) Query: 47 VPIRHDFNGPYAGLS--------------ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM 92 P ++ G Y G + A G GYN + S + Sbjct: 241 TPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQASNWV 300 Query: 93 YGVEGDVRYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 +GVE D + + + G+ R R GY + S L Y T G Sbjct: 301 FGVEADFQGSTQKDQRASVLGPRAYYDAKLPWFGTARGRIGYSL-GSTLFYGTAGYAYGN 359 Query: 145 KYETGKAG----EITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG 192 + G AG G+E L + ++ EY Sbjct: 360 IKSDIVSSIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLYVDLGSTTD 416 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 74/225 (32%), Gaps = 47/225 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++F V ++ A S AQAAD +A + V +D+ G Y G Sbjct: 1 MKRIFAGVVLAGTAAVS---AQAADLAVKAPYLK----------APVAAVYDWTGFYIGA 47 Query: 61 SALYNGSFGEEAHHNAGG---------------SIFAGYNVEDSCI----MYGVEGDVRY 101 + + H GG GYN + + G+E D++ Sbjct: 48 NVGVGLGRNLQTHAYPGGASLNTTYLQPQGVIGGGQIGYNWQLGSFLGPMLLGLEADIQG 107 Query: 102 TVPV--------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG- 152 + LA N + G++R R G V + Y T G V T G Sbjct: 108 SGASDGYTSLNGLATNYNQKLDWFGTVRGRVGL-VRGPAVAYFTGGYAVGSVKTTVTEGG 166 Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + + G G GVE L + ++EY F Sbjct: 167 LVAFDNSKTRSGWVIGSGVEA-ALGGNWTGKIEYLYLDLGNQTDF 210 >gi|156739586|gb|ABU93453.1| Omp25 [Brucella melitensis] Length = 64 Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 VKQGFEGSLRARVGYDL-NPVMPYLTAGIVGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58 Query: 172 LSESLV 177 L+++++ Sbjct: 59 LTDNIL 64 >gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 222 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 79 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 138 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 198 SQVNGIEQRNNLKNHSIKAGLNYKF 222 >gi|296447421|ref|ZP_06889346.1| OmpA domain protein transmembrane region-containing protein [Methylosinus trichosporium OB3b] gi|296255041|gb|EFH02143.1| OmpA domain protein transmembrane region-containing protein [Methylosinus trichosporium OB3b] Length = 271 Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 71/233 (30%), Gaps = 59/233 (25%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L ++ + SA AAD + G YAGL Sbjct: 1 MKTLSALSMIT--LGFAVSSASAADLPSAK---------APVAFVEPAPAFTWTGVYAGL 49 Query: 61 SALYNGS--------------------FGEEAHHNAGGSIFAGYNVEDS--CIMYGVEGD 98 + Y S F A G GYN + + + G+E D Sbjct: 50 NIGYGWSEKQSIAGTVSAAGTPIAFWSFPSSAVDGVLGGGQIGYNRQFAGTSFVVGLEAD 109 Query: 99 V------RYTVPVLADNIHS---------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 Y+ N G++R R GY V+ +LL+Y T G Sbjct: 110 FRGAGVNGYSNGFGPTNQFGYTPFVNARQQLDWFGTVRGRLGYAVAPTLLVYGTGGFAYG 169 Query: 144 QKYETGKAG----------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 T G + + G TAG GVE L A++EY ++ Sbjct: 170 GYRATYSGGAVGVPVTVSVSNSDVRTGWTAGGGVEWAFL-PRWSAKVEYLYTE 221 >gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str. 9-941] gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus 2308] gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19] gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str. 870] gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str. Tulya] gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str. 86/8/59] gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str. 292] gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str. C68] gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038] gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870] gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292] gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59] gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68] gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya] gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196] gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus] gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus] gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus 2308] gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19] gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038] gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292] gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59] gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870] gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68] gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya] gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196] Length = 212 Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G E G+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSASGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|90424285|ref|YP_532655.1| hypothetical protein RPC_2788 [Rhodopseudomonas palustris BisB18] gi|90106299|gb|ABD88336.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 578 Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 75/253 (29%), Gaps = 78/253 (30%) Query: 29 RAHHGGRGVVPTIATNRYV----PIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAG 77 ++ + P A + P+ ++ G Y G ++ S G Sbjct: 318 QSSYKWGDTTPPSAAVGFATKAPPLAVNWTGVYVGGQLGAGFGPKHWSDSIGSTTSLVNP 377 Query: 78 GSIF-AG--------------------------YNVEDSCIMYGVEGDVRYTVPVLADNI 110 GS F AG YN + + GVE DV + + I Sbjct: 378 GSDFPAGTPPGLNVGGFGKSTPMAGGLGGAQLGYNFQTGRTVLGVEADVAFADLKGSHTI 437 Query: 111 HSLHGIG---------GSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKA--------- 151 +S G G GS+ R GY V +LL G V + Sbjct: 438 YSGLGGGQAEAHTTALGSVTGRVGYAVERNLLYVKAGGAWAVTDHTLDTSSIFIPSQGEG 497 Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----------------KVE 191 + +G T G G+E + A+LEY + ++ Sbjct: 498 CCHDNVRSTRLGWTVGAGLEY-AVDRHWSAKLEYDYMDFGSQSVSFPVNARLGLPSVDID 556 Query: 192 GFYNTISLGVGMK 204 ++ + +GV K Sbjct: 557 QAFHVVKMGVNYK 569 >gi|154246410|ref|YP_001417368.1| porin [Xanthobacter autotrophicus Py2] gi|154160495|gb|ABS67711.1| porin [Xanthobacter autotrophicus Py2] Length = 258 Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 55/197 (27%), Gaps = 43/197 (21%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGS------------------FGEEAHHNAGGSIFA 82 V + G Y G + Y G Sbjct: 28 PVKAVAVAPVFSWTGFYIGANVGYGGDKFTFDEVESYNGYPYYATSTSLNSSGFFAGGQI 87 Query: 83 GYNVED-SCIMYGVEGDVRYTVPVLADNIHS---------------LHGIGGSLRIRGGY 126 GYN + + ++ G E D++++ + S G++R R GY Sbjct: 88 GYNYQFANNVVLGAETDLQWSGIEGKADYSSVYLYGGYPYTSSFGASVDYFGTIRARIGY 147 Query: 127 EVSDSLLLYATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 D L Y T G + +G + G T G GVE ++ + + Sbjct: 148 AF-DRFLPYITGGAAYGKTKVSGSYYDYSVGGFSASGTNWGWTVGGGVEY-AITNNWTFK 205 Query: 180 LEYRASKYSKVEGFYNT 196 EY + Y + Sbjct: 206 TEYLYVDLGSTDYTYAS 222 >gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1] gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 222 Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 79 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 138 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 198 SQVNGIEQRNNLKNHSIKAGLNYKF 222 >gi|156739606|gb|ABU93463.1| Omp25 [Brucella canis] Length = 63 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 GI GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 VKQGIEGSLRARVGYDL-NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58 Query: 172 LSESL 176 L++++ Sbjct: 59 LTDNI 63 >gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2] gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2] Length = 212 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 71/202 (35%), Gaps = 26/202 (12%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHNA 76 SA AAD + + V HD++G Y G + S + A Sbjct: 21 SAFAADMMGGTDYTYSDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASRTGA 72 Query: 77 GGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134 G I G N+++ I++G EG+ + G+ + + GY D L+ Sbjct: 73 LGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DKTLV 131 Query: 135 YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-- 192 Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 132 YGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVKSQV 190 Query: 193 ---------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 191 NGIEQRNNLKNHSIKAGLNYKF 212 >gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1] gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1] Length = 212 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 71/202 (35%), Gaps = 26/202 (12%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHNA 76 SA AAD + + V HD++G Y G + S + A Sbjct: 21 SAFAADMMGGTDYTYSDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASRTGA 72 Query: 77 GGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134 G I G N+++ I++G EG+ + G+ + + GY D L+ Sbjct: 73 LGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DKTLV 131 Query: 135 YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG-- 192 Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 132 YGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVKSQV 190 Query: 193 ---------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 191 NGIEQRNNLKNHSIKAGLNYKF 212 >gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365] gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40] gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis] gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365] gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40] Length = 212 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 S SA AAD + + V HD++G Y G + S + Sbjct: 18 SAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|46202723|ref|ZP_00052712.2| COG3659: Carbohydrate-selective porin [Magnetospirillum magnetotacticum MS-1] Length = 693 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 68/214 (31%), Gaps = 57/214 (26%) Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE--------------------- 70 HG PT ++P + G Y G +FG+ Sbjct: 10 HGADLATPTPHDATHLPSFGTWAGGYTGWQGSAGDAFGDFGFGSGMIGRRSVPEFRTGDA 69 Query: 71 EAHHNAG-------GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-------------- 109 ++AG G +F GY + +YGVE DV T + Sbjct: 70 TGRNDAGRNATTALGGLFGGYAWQIGPFVYGVEADVDATNLKRPVSSTTPGFGFEGLDPA 129 Query: 110 ---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI--------- 157 I + + G+ R R GY L+YA+ G AQ + Sbjct: 130 FPVIRAKADVFGTARARVGYAFE-RYLVYASFGLAGAQVRFLTNFPDPATTSAPALRRGR 188 Query: 158 -AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 +G + G G+E ++E L LEYR + Sbjct: 189 AFLGFSLGAGIEY-AITEHLALGLEYRYLDLGRS 221 >gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330] gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str. 513] gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str. 686] gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915] gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513] gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686] gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026] gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330] gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915] gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti] gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445] gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915] gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513] gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686] gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026] Length = 212 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGAQVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|119383169|ref|YP_914225.1| outer membrane protein [Paracoccus denitrificans PD1222] gi|119372936|gb|ABL68529.1| outer membrane protein [Paracoccus denitrificans PD1222] Length = 255 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 84/255 (32%), Gaps = 58/255 (22%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + ++ ++A + +A AA+ V A D+ G YAGL+ Sbjct: 6 VKASLTAGAVASLALGTALAANAGGYTPPVVDTDV--TAPVVESAPVGDWAGAYAGLTLG 63 Query: 64 ------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105 Y G G+ A + GY + ++G E + + Sbjct: 64 YAFGGDDRVGFTEVDTGTYLGDAGKLELGGANAGLHVGYRWQRDRWVFGPE--LGFEAGN 121 Query: 106 LADNIHSLHGIGGS------------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153 + D I + +GGS LR++ GY + LLLY G A + Sbjct: 122 IKDTITFDNQLGGSTDVSSKIRNVLALRLKTGYALRPDLLLYGIAGIARADVEYKVAGTD 181 Query: 154 ITP---------IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----------- 193 + + G G+GVE LS+ + EY + + K Sbjct: 182 GSGGSMSESRDFKSNGYIVGLGVE-RKLSDRMSVTGEYEYANFGKTTRTFQVDGGVSTQA 240 Query: 194 ---YNTISLGVGMKF 205 Y+ + LG+ KF Sbjct: 241 TPDYHNVKLGLNFKF 255 >gi|39936434|ref|NP_948710.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009] gi|39650289|emb|CAE28812.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 240 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 71/238 (29%), Gaps = 41/238 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + + ++ +A A AAD P + +++ G Y G Sbjct: 1 MKTMKNTLLGAAAVIALSAPAFAADLP---PRPYTKAAPAYTAPE---VVYNWTGFYVGG 54 Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGI 116 + N+G G + G + + + + G+E + I Sbjct: 55 HVGGAWAGDNNITGNSGRFFGGVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGST 114 Query: 117 G-------GSLRIRGGYEVSDSLLLYATVGPD--------VAQKYETGKAGEITPIAIGG 161 GS+ R GY L+YA G + G Sbjct: 115 ATEDTRGLGSVTGRLGYAW-GPTLVYAKGGYAWRDSDLSVASLGGVPSGYTTSGSRNDGY 173 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205 T G G+E + S A++EY+ K+ +T+ G+ +F Sbjct: 174 TVGAGLEY-MFAPSWSAKVEYQYYKFGDTTFTGGPADVVGTSFRNDEHTVKAGINYRF 230 >gi|188581225|ref|YP_001924670.1| carbohydrate-selective porin OprB [Methylobacterium populi BJ001] gi|179344723|gb|ACB80135.1| Carbohydrate-selective porin OprB [Methylobacterium populi BJ001] Length = 703 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 70/215 (32%), Gaps = 63/215 (29%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGE---------------------EAHHNAGG--- 78 R P D++G YAG+ SFG + GG Sbjct: 36 AERARPRFLDWSGLYAGVQGSAGASFGNYDIGPTTIGTRRVRTISTGDATGSRDLGGDAT 95 Query: 79 ----SIFAGYNVEDSCIMYGVEGDVRYTVPVLADN-----------------IHSLHGIG 117 FAG+N +D I+YG+E D+ T + + Sbjct: 96 TVAAGAFAGWNWQDGAIVYGLEADLAGTNLKRGARSDAPGFGYEAVDPPFALVREKTDLF 155 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP----------IAIGGTAGVGV 167 G+ R R GY ++ L+YAT G A +++ +G T G GV Sbjct: 156 GAARARLGYAFGNN-LIYATFGLTGANGRVLATYPDLSGGPTATAARNVSYLGYTLGAGV 214 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 + + L ++YR S + G+G Sbjct: 215 QF-AVDPHLSLGIDYRYSDLG------ESARFGLG 242 >gi|192292221|ref|YP_001992826.1| porin [Rhodopseudomonas palustris TIE-1] gi|192285970|gb|ACF02351.1| porin [Rhodopseudomonas palustris TIE-1] Length = 240 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 71/238 (29%), Gaps = 41/238 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + + ++ +A A AAD P + +++ G Y G Sbjct: 1 MKTMKNTLLGAAAVIALSAPAFAADLP---PRPYTKAAPAYTAPE---VVYNWTGFYVGG 54 Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGI 116 + N+G G + G + + + + G+E + I Sbjct: 55 HVGGAWAGDNNITGNSGRFFGGVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGST 114 Query: 117 G-------GSLRIRGGYEVSDSLLLYATVGPD--------VAQKYETGKAGEITPIAIGG 161 GS+ R GY L+YA G + G Sbjct: 115 ATEDTRGLGSVTGRLGYAW-GPTLVYAKGGYAWRDSDLSVASLGGVPSGYTASGSRNDGY 173 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205 T G G+E + S A++EY+ K+ +T+ G+ +F Sbjct: 174 TVGAGLEY-MFAPSWSAKVEYQYYKFGDTTFTGGPADVVGTSFRNDEHTVKAGINYRF 230 >gi|192291194|ref|YP_001991799.1| outer membrane insertion C-terminal signal [Rhodopseudomonas palustris TIE-1] gi|192284943|gb|ACF01324.1| outer membrane insertion C-terminal signal [Rhodopseudomonas palustris TIE-1] Length = 997 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 73/225 (32%), Gaps = 46/225 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + V S+ + SA AAD A VP ++ G Y G Sbjct: 1 MKNFPAWLSVWSVVAVACGSAHAADLQNG------------AVPSAVPAATNWTGFYIGT 48 Query: 61 SALYNGS-------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 S G NA I GYN + + G+EGD + Sbjct: 49 HVGAAASDSAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQFGNYVLGIEGDASF 108 Query: 102 -TVPVLADNIHSLHGIGG------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-- 152 ++ LA +H +L R GY D LL+Y G A + +G Sbjct: 109 GSINGLARCLHGTFACTSRIDELWTLAARFGYAAGD-LLVYGKAGAAWADVHRRMASGNF 167 Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 E + G G GVE L L A++EY + + Sbjct: 168 VNVLEASETRSGWLLGAGVEYAFL-PGLSAKIEYNYADFGSRSLT 211 Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 66/208 (31%), Gaps = 43/208 (20%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------H 74 D + HG P IA ++ G Y G S A Sbjct: 765 DAAEASAHGITKAPPRIAPT-------NWTGLYVGASVGAGWGRTTYADPFPTPTTGDRA 817 Query: 75 NAGGSIFAGY---NVEDSCIMYGVEGDVRYTVPVLADNIHSLH------GIG-------- 117 + GG++ G N + ++ GVE + D + G Sbjct: 818 DLGGALLGGQIGANYQFGHLVAGVEASANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAI 877 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVG 170 G+ RGGY + D LLY G ++ + G T G T G G+E Sbjct: 878 GAFTARGGYAI-DRTLLYVKGGAAWDRQQDQFNTVGVGGTTLANTSTNWGWTVGGGLEY- 935 Query: 171 GLSESLVARLEYRASKYSKVEGFYNTIS 198 L+ S LEY+ + F +++ Sbjct: 936 ALAPSWSMALEYKYFDFGASPAFSTSVT 963 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 66/217 (30%), Gaps = 49/217 (22%) Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA----------- 82 G V + + G Y G+ A G FG +A G++ A Sbjct: 240 GAASVSAAPLPGVPLPQWSWTGIYLGVHAG--GGFGSNDWDSATGALLAASTSGGFPGRG 297 Query: 83 -----------GYNVEDSCIMYGVEGDV------RYTVPVLADNI------HSLHGIGGS 119 G N + + GVE Y H+ G+ Sbjct: 298 DSSGLFGGGQIGANYQFGRWVAGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGT 357 Query: 120 LRIRGGYEVSDSLLLYATVGPD-VAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLS 173 + R G + LL+Y G + +AG + G G G+E LS Sbjct: 358 ITGRLGQTWGN-LLIYGKAGAAWATGSSDAQRAGSASRFTESGTRWGWVTGTGLEY-ALS 415 Query: 174 ESLVARLEYRASKYSK-----VEGFYNTISLGVGMKF 205 +L A +EY + V+ F N +G KF Sbjct: 416 PNLSAFVEYNHVDFGTQDTAYVDQFGNASEVGFKQKF 452 >gi|312113068|ref|YP_004010664.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC 17100] gi|311218197|gb|ADP69565.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC 17100] Length = 260 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 72/234 (30%), Gaps = 41/234 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M + G + + A AADP +GG G + V + G Y G Sbjct: 1 MSVVKSVGGAALGMFLAAQVAYAADPYYGGGYGGYGGYKDPYPPQPVAPIPLWQGFYIGG 60 Query: 61 SALYNGSFGEEAHH-------------------NAGGSIFAGYNVEDSCIMYGVEGDVRY 101 + S E A + G + GYN+ ++G+EGD+ Sbjct: 61 NIGGAWSTIETASNVVFVNGATTVLSDRSVEGSGFLGGLQLGYNIPIGNFLWGIEGDLGG 120 Query: 102 TVPVLADN------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG 149 + + + S G G + +RGG+ + + L+Y G Sbjct: 121 LGNDASKSFAVGGVLPSVLTVSSDGGWYGDVTVRGGF-LYGNALIYLKGGFGFYTGETNV 179 Query: 150 KAGEI--------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 + G T G G+E +S + EY + ++ Sbjct: 180 TLVTDNISALRQSSGTFTGWTLGGGLEYQ-VSPRWSIKAEYLYFDFGDSTLNFD 232 >gi|254561199|ref|YP_003068294.1| outer membrane porin [Methylobacterium extorquens DM4] gi|254268477|emb|CAX24434.1| Putative outer membrane porin (OMPA-like) [Methylobacterium extorquens DM4] Length = 703 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 75/241 (31%), Gaps = 75/241 (31%) Query: 7 AVGVSSLALASF--CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 AV A+ F + AAD RA P D++G YAG+ Sbjct: 14 AVSAGLAAILGFHAGAGMAADLAERAG----------------PRFIDWSGFYAGVQGSA 57 Query: 65 NGSFGE----------------EAHHNAG------------GSIFAGYNVEDSCIMYGVE 96 SFG G G FAG+N +D +YGVE Sbjct: 58 GASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDATTAVGGAFAGWNWQDGAFVYGVE 117 Query: 97 GD-VRYTVPVLADNIHSLHGIG----------------GSLRIRGGYEVSDSLLLYATVG 139 D V + A + + G G+ R R GY ++ L+YAT G Sbjct: 118 ADLVGANLKRGARSDATGFGYEGIDPPFALIREKTEVFGAARARLGYAFGNN-LIYATAG 176 Query: 140 PDVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 A + +G T G GV+ + L ++YR S + Sbjct: 177 LTGANGRVLATYPDLAGGPTVTATRNVSYLGFTLGAGVQF-AVDPHLSLGIDYRYSDLGE 235 Query: 190 V 190 Sbjct: 236 S 236 >gi|319898375|ref|YP_004158468.1| Hemin-binding protein E [Bartonella clarridgeiae 73] gi|319402339|emb|CBI75878.1| Hemin-binding protein E [Bartonella clarridgeiae 73] Length = 288 Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 80/290 (27%), Gaps = 98/290 (33%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--- 63 + S QAAD + V + G Y G Sbjct: 6 LMITSIWIFVLASMVQAADIMIPYQQQSHQ-----PAPMIVSSDFSWTGFYFGGQVGGFS 60 Query: 64 ----YNGSFGEEAH------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVL 106 G +A G ++AG NV ++ G++ D+ ++ Sbjct: 61 SKSTVRGRRNSDAEWESLEPKYLPKLSGVIGGVYAGSNVNFGNGLILGIDTDMAWSGKKD 120 Query: 107 ADNIHS-------------------------------------------------LHGIG 117 IH Sbjct: 121 TKIIHREEQNEETVEEESTRRQENTRNNNSRVERSVQVCAVAEEGSNPVSSSHTLKEKWV 180 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYE-------------TGKAGEITPIAIGGTAG 164 G+ R+R G+ V D ++ Y + G Q + T + T + +G T G Sbjct: 181 GATRVRIGFAV-DRVMPYVSGGVAYTQLQDLLTIRKEGKELPITRNVIDDTKVFVGYTFG 239 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205 G++ +++S++ R EYR S + K + N +GV KF Sbjct: 240 GGIDF-AMAKSVILRAEYRYSDFGKKKFAKDKMEIGYKTNDFRVGVAYKF 288 >gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis B2/94] gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94] gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99] gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94] gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99] gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis] gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti] gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti] gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94] gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99] Length = 212 Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|12620707|gb|AAG60983.1|AF322013_102 ID693 [Bradyrhizobium japonicum] Length = 325 Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 35/210 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ + AL + + D + +P A D++G Y G Sbjct: 85 MKKILILTACIG-ALCAAAPSFGTDLAGQPVKVKAAPLPVAA------PIIDWSGYYMGA 137 Query: 61 SALY---------NGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLA-- 107 + + NG E H++ GG++ GY + ++YG+EG + + Sbjct: 138 NGGWGTSHNCWDFNGITSEGCHNSTGGTVGGQIGYRWQIFNMVYGLEGQGNWADFRGSNV 197 Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGKA-----GEI 154 D + + G L GY +++LLY G V Y A G+ Sbjct: 198 STAFPTDTVGTTTDAFGLLTGHIGYAF-NAVLLYGKGGAAVTSNTYYVNSVATGTELGKN 256 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 + GG G G EV L+ + A +EY Sbjct: 257 NDVRWGGVLGAGAEVS-LTPNWSAGVEYNH 285 >gi|39933934|ref|NP_946210.1| outer membrane protein [Rhodopseudomonas palustris CGA009] gi|39647781|emb|CAE26301.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 244 Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 39 PTIATNRYVP-IRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE 87 P Y P +++ G Y G G+F + G G + AGY+ + Sbjct: 38 PYTKAPAYAPAPVYNWTGFYIGGHIG--GAFSGDNSIGTGVTASDNGKFLGGVQAGYDWQ 95 Query: 88 D-SCIMYGVEGDVRYTVPVLADNIHSLHGIGG-------------SLRIRGGYEVSDSLL 133 + GVEG +Y+ + N G G S+ R GY L Sbjct: 96 FAPNWVLGVEG--QYSW-LSGTNSSVSWGAPGAVFTYSDNQRGLASVTGRLGYTW-GPAL 151 Query: 134 LYATVGPDVAQ-----KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 LY G A + + G T G G+E + + ++EY+ + Sbjct: 152 LYVKGGWAYADYSSSLTFNNVGVAVDSKT-DGYTVGGGLEYL-FAPNWSGKIEYQYYDFG 209 Query: 189 KV--------EGFYNTISLGVGMKF 205 V + + + G+ +F Sbjct: 210 NVTLAPGFTAKNDEHVVKAGLNYRF 234 >gi|209885837|ref|YP_002289694.1| OmpA domain protein transmembrane region-containing protein [Oligotropha carboxidovorans OM5] gi|209874033|gb|ACI93829.1| OmpA domain protein transmembrane region-containing protein [Oligotropha carboxidovorans OM5] Length = 236 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 72/226 (31%), Gaps = 50/226 (22%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--YNGS------- 67 S S AAD R T A V +++ G Y G + GS Sbjct: 14 SSTSVFAADLAAR--------PYTKAPPAPVAPIYNWTGLYIGAQVGGAFQGSSGFVTDD 65 Query: 68 ---FGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVR------YTVPVLADNIHSLHGIG 117 G + G G N + + G+EG+ YT D I + Sbjct: 66 PLVTGNRDDSSFLGGGVLGANYQFSPNWVLGIEGEFNGLSNNRYTFTDGFDGIRVKNDWL 125 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-----GGTAGVGVEVGGL 172 S+ R GY ++YA G + G TP + G T G G+E Sbjct: 126 ASVTGRLGYTW-GPGMIYAKGGVAF---RDNGGIAATTPFLVSRDTTGYTVGAGLEY-MF 180 Query: 173 SESLVARLEYRASKYSKV-------------EGFYNTISLGVGMKF 205 + + A++EY+ + + +T+ G+ F Sbjct: 181 APAWSAKIEYQYYDFDRTALTFGTLPSTVSYRDDLHTVKAGINYHF 226 >gi|27379978|ref|NP_771507.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27353131|dbj|BAC50132.1| bll4867 [Bradyrhizobium japonicum USDA 110] Length = 258 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 27/178 (15%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSAL---------YNGSFGEEAHHNAGGSIFA--GYNVE 87 P V +D++G Y G++ G E +H GG++ GY + Sbjct: 48 PYTKAPAMVAAIYDWSGFYIGINGGGGSAHSTWDLVGGGREGSHDATGGTVGGQIGYRWQ 107 Query: 88 DSCIMYGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 ++GVEG + + A S G + + GY +++L+Y G Sbjct: 108 SGQWVFGVEGQGNWADFSGDNVSALFATRNRSKIDSFGLITGQVGYAW-NNVLIYVKGGA 166 Query: 141 DVAQKYETGKA-------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 VA + GGT G G+E G + + +EY + Sbjct: 167 AVAGTKYEVFSTASGALLSSNDQTRWGGTVGAGLEY-GFAPNWSVGVEYNHIFLQDKD 223 >gi|163851436|ref|YP_001639479.1| carbohydrate-selective porin OprB [Methylobacterium extorquens PA1] gi|163663041|gb|ABY30408.1| Carbohydrate-selective porin OprB [Methylobacterium extorquens PA1] Length = 703 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 64/203 (31%), Gaps = 57/203 (28%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGE----------------EAHHNAG--------- 77 R P D++G YAG+ SFG G Sbjct: 36 AERARPRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDAT 95 Query: 78 ---GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS-----------------LHGIG 117 G FAG+N +D ++YG+E D+ + + Sbjct: 96 TAVGGAFAGWNWQDGALVYGIEADLVGANLKRGARSDATGFGYEGIDPPFALIREKTDVF 155 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY------ETGKAGEITPIA----IGGTAGVGV 167 G+ R R GY ++ L+YAT G A + T +G T G GV Sbjct: 156 GAARARLGYAFGNN-LIYATAGLTGANGRVLATYPDLAGGPTATATRNVSYLGFTLGAGV 214 Query: 168 EVGGLSESLVARLEYRASKYSKV 190 + + L ++YR S + Sbjct: 215 QF-AVDPHLSLGIDYRYSDLGES 236 >gi|218678361|ref|ZP_03526258.1| outer membrane protein [Rhizobium etli CIAT 894] Length = 96 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 8/102 (7%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + S A+A +AQAAD V + +A + V ++ G Y G Sbjct: 1 MRVLIAGLMASVFAIAGISAAQAADAVDQIPEA------PVAQDAPVKPAGNWEGFYLGG 54 Query: 61 SALYN-GSFGEEAH-HNAGGSIFAGYNVEDSCIMYGVEGDVR 100 + YN GSFG + H + GG +F GYN + I+YGVE D+ Sbjct: 55 AGTYNMGSFGSDRHTYGFGGQVFTGYNWQQGQIVYGVESDLG 96 >gi|240138602|ref|YP_002963074.1| putative outer membrane porin (OMPA-like) [Methylobacterium extorquens AM1] gi|240008571|gb|ACS39797.1| Putative outer membrane porin (OMPA-like) [Methylobacterium extorquens AM1] Length = 703 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 61/194 (31%), Gaps = 57/194 (29%) Query: 52 DFNGPYAGLSALYNGSFGE----------------EAHHNAG------------GSIFAG 83 D++G YAG+ SFG G G FAG Sbjct: 45 DWSGFYAGVQGSAGASFGNYDLGPTTIGPRRVRSISTGDATGSRDLGGDATTAVGGAFAG 104 Query: 84 YNVEDSCIMYGVEGDVRYTVPVLADNIHS-----------------LHGIGGSLRIRGGY 126 +N +D ++YG+E D+ + + G+ R R GY Sbjct: 105 WNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVFGAARARLGY 164 Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGGLSESL 176 ++ L+YAT G A + +G T G GV+ + L Sbjct: 165 AFGNN-LIYATAGLTGANGRVLATYPDLAGGPTVTATRNVSYLGFTLGAGVQF-AVDPHL 222 Query: 177 VARLEYRASKYSKV 190 ++YR S + Sbjct: 223 SLGIDYRYSDLGES 236 >gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33] gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33] gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae] gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33] Length = 212 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 26/205 (12%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGGTDYTYNDPV--------AAGLHDWSGNYVGAQVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 G-----------FYNTISLGVGMKF 205 ++I G+ KF Sbjct: 188 SQVNGIEQRNNLKNHSIKAGLNYKF 212 >gi|192291549|ref|YP_001992154.1| hypothetical protein Rpal_3175 [Rhodopseudomonas palustris TIE-1] gi|192285298|gb|ACF01679.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 566 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 73/228 (32%), Gaps = 57/228 (25%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + VS++ S +A+AAD R A ++ G Y G Sbjct: 1 MRT--SIICVSAVLAVSCGAAEAADLSR-------------APATKAITAWNWTGFYLGG 45 Query: 61 SALYNGSFGEEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------ 98 G + + G SI+ AGYN + + GVE D Sbjct: 46 HLG-AGFGTAKVDNPFGPSIYGDTVRAPKALAGLQAGYNWQAHGSPWVLGVEVDASAIDA 104 Query: 99 ------VRYTVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV-------- 142 + Y+ ++ N + G+L R G+ L+Y G Sbjct: 105 DGTNTCLAYSGQFVSANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGGGAFLFGNFRMT 164 Query: 143 --AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 A Y + E+ G T G G+E LS R EY + + Sbjct: 165 TNAPDYLNQPSAELDTTRWGWTVGAGIE-HALSSRWAVRAEYDYANFG 211 >gi|319408577|emb|CBI82232.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1] gi|319408616|emb|CBI82271.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1] Length = 439 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 24/115 (20%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-------------YETGKAGEITPIAI 159 G+ R+R G+ V D ++ Y G AQ + + I + Sbjct: 327 KQKWSGATRVRIGFAV-DRIVPYIAGGVAYAQLQNIFSRSIETEGHEISSSSLSDKKIMV 385 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205 G T G GV+ ++++++ R EYR S + K ++ N +GV KF Sbjct: 386 GYTLGGGVDF-AMADNVILRAEYRYSDFGKQKFAKDKLELDYQTNDFRVGVAYKF 439 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 38/138 (27%) Query: 5 FLAVGVSSLALASFCSAQAAD--------PVRRAHHGGRGVVPTIA-------TNRYVPI 49 + S + L + AQAAD PV + + P + Sbjct: 4 KCLISTSIITLFTASVAQAADIMVPRESRPVVSPPQASKQISPPVEMSPNSDIPPVISAP 63 Query: 50 RHDFNGPYAGLS-ALYNGSFGEEAHHNAG---------------------GSIFAGYNVE 87 +NG Y G ++G G + G G ++AG NV+ Sbjct: 64 TFSWNGFYLGGQIGGFSGKTGISLYAKKGPSTREWTPVEKDTVPQLSGFMGGLYAGANVD 123 Query: 88 DSC-IMYGVEGDVRYTVP 104 + GV+ D+ ++ Sbjct: 124 LGNSFILGVDTDIVWSNK 141 >gi|39935901|ref|NP_948177.1| hypothetical protein RPA2834 [Rhodopseudomonas palustris CGA009] gi|39649755|emb|CAE28276.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 566 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 73/228 (32%), Gaps = 57/228 (25%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + VS++ S +A+AAD R A ++ G Y G Sbjct: 1 MRT--SIICVSAVLAVSCGAAEAADLSR-------------APATKAITAWNWTGFYLGG 45 Query: 61 SALYNGSFGEEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------ 98 G + + G SI+ AGYN + + GVE D Sbjct: 46 HLG-AGFGTAKVDNPFGPSIYGDTVRAPKALAGLQAGYNWQAHGSPWVLGVEVDASAIDA 104 Query: 99 ------VRYTVPVLADNIHSLHGIGGSLRIRGGYEV--SDSLLLYATVGPDV-------- 142 + Y+ ++ N + G+L R G+ L+Y G Sbjct: 105 DGTNTCLAYSGQFVSANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGGGAFLFGNFRMT 164 Query: 143 --AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 A Y + E+ G T G G+E LS R EY + + Sbjct: 165 TNAPDYLNQPSAELDTTRWGWTVGAGIE-HALSSRWAVRAEYDYANFG 211 >gi|316932343|ref|YP_004107325.1| porin [Rhodopseudomonas palustris DX-1] gi|315600057|gb|ADU42592.1| porin [Rhodopseudomonas palustris DX-1] Length = 448 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 54/201 (26%), Gaps = 43/201 (21%) Query: 47 VPIRHDFNGPYAGLSALYNGSFGEE-------------AHHNAGGSIFAGYNVEDSCIMY 93 P ++ G Y G + + A G GYN + ++ Sbjct: 241 APPPANWAGLYIGGNFGGATARDRSSVTIAGVTDAFNLAPDGFFGGGQIGYNWQAVNWVF 300 Query: 94 GVEGDVRYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 GVE D + + + G+ R R GY + S L Y T G Sbjct: 301 GVEADFQGSTLKDQRAAVLGPAVFYDAKLPWFGTARGRIGYSL-GSTLFYGTAGYAYGNI 359 Query: 146 YETGKAG----EITPIAIGGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEG---- 192 + G AG G+E L + ++ EY Sbjct: 360 KTDIVSAIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLYVDLGSTTDAFGA 419 Query: 193 --------FYNTISLGVGMKF 205 +T+ G+ F Sbjct: 420 TGINTTKVTQHTLRTGINYHF 440 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 71/225 (31%), Gaps = 47/225 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ V ++ A S AQAAD +A + V +D+ G Y G Sbjct: 1 MKRILAGVVLAGTAAVS---AQAADLAVKAPYMK----------APVAAVYDWTGFYIGA 47 Query: 61 SALYNGSFGEEAHHNAGGSIF---------------AGYNVEDSCIM----YGVEGDVRY 101 + + H G GYN + + GVE D++ Sbjct: 48 NVGVGLGRDLQTHSYPGAGTLNSTYLQPQGAIGGGQIGYNWQFGSMFGPMLIGVEADIQG 107 Query: 102 TV--------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG- 152 + LA N + G++R R G V Y T G V T G Sbjct: 108 SGMSDGYTSLNGLATNYNQKLDWFGTVRGRVGL-VRGPAFGYFTGGYAVGNVKTTVTEGG 166 Query: 153 ----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + + G G GVE L + ++EY F Sbjct: 167 LVAFDNSKTRSGWVIGSGVEA-ALGGNWSGKIEYLYLDLGNQTDF 210 >gi|240142230|ref|YP_002966740.1| hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens AM1] gi|240012174|gb|ACS43399.1| Hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens AM1] Length = 269 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 48/192 (25%) Query: 52 DFNGPYAGLSALYNGSFGEEAHHN---------------AGGSIFAGYNVEDSCIMYGVE 96 D++G Y G + + G G++ + +++G Sbjct: 58 DWSGAYVGFQVGGAFAGKPSIGDDRVTRSLLSNGREFSGFTGGGHVGFDYQVGSVVFGGI 117 Query: 97 GDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSD-SLLLYATV 138 GD+ Y + I G++R R G+ D +L Y T Sbjct: 118 GDINYVDIRAKGAGPFTLVQNGVVTTYNATGTAGLEIDGTVRARLGFAGLDLPILPYVTG 177 Query: 139 GPDVAQKY--------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 G + + T + + +G G GV+ ++++ AR+EY Sbjct: 178 GLALGTGFGNFRLLGTDPATGAVTSQNLRDSRTNVGYAVGGGVDY-AFTDNIRARVEYLY 236 Query: 185 SKYSKVEGFYNT 196 + S+ F N Sbjct: 237 TDLSQARYFQNV 248 >gi|300025034|ref|YP_003757645.1| porin [Hyphomicrobium denitrificans ATCC 51888] gi|299526855|gb|ADJ25324.1| porin [Hyphomicrobium denitrificans ATCC 51888] Length = 231 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 67/200 (33%), Gaps = 47/200 (23%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHH---------NAGGSIFAGYNVEDSC-IMYGVEGDVR 100 D+ G YAGL A Y+ S + G + GYN + ++ G+E D+ Sbjct: 34 FDWTGAYAGLQAGYSWSSARYSDDTYLSEANPEGFIGGGYIGYNYQLPSRLVLGIEADIV 93 Query: 101 YTVPVLADN---------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + +D + ++R R GY L Y G Sbjct: 94 GSGMDGSDGQRYLDDPSVSIAGVELEMETRWSAAVRGRIGYAY-GRYLPYIAGGVSFTDY 152 Query: 146 Y------ETGKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK------------ 186 + G G GVE ++ ++ R EYR + Sbjct: 153 EFRWIDHVNATVPFKREQSRTGWNIGTGVEYAA-NDWVIVRAEYRYTDFGTDHFPNDFAG 211 Query: 187 -YSKVEGFYNTISLGVGMKF 205 YSK+E + + LGVG+KF Sbjct: 212 PYSKMELQTHDLRLGVGVKF 231 >gi|148253089|ref|YP_001237674.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146405262|gb|ABQ33768.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1] Length = 598 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 55/156 (35%), Gaps = 31/156 (19%) Query: 78 GSIFAGYNVEDSC-IMYGVEGDVR-----------YTVPVLADNIHSLHGIGGSLRIRGG 125 G + GYN E ++ GVE D+ ++ + GSLR R G Sbjct: 13 GGLQLGYNRELPSRVVLGVETDLSFPNYLDFDDIIWSGVNANGRVTEKVDYYGSLRGRIG 72 Query: 126 YEVSDSLLLYATVGPDVAQKYE-----TGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 Y L+YAT G +Q + G AG GVE + + AR+ Sbjct: 73 YA-PARWLIYATAGLAYSQGRLTEDPFDPATQKKIGFRAGWVAGAGVEAP-VDGNWTARI 130 Query: 181 EYRASKYSKVEGF------------YNTISLGVGMK 204 EY S + + +T+ LG+ K Sbjct: 131 EYLYSNFGSLNVMLPSGTSYGSTFDLHTVRLGLNRK 166 >gi|90424594|ref|YP_532964.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18] gi|90106608|gb|ABD88645.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18] Length = 236 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 71/238 (29%), Gaps = 45/238 (18%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+KL L ++ + A AAD P + +++ G Y G Sbjct: 1 MRKLLLG---TAALMVLAAPAFAADL----PAPTYTKAPAYTAPE---VVYNWTGFYIGG 50 Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGI 116 + N G G + G + + + G+E + + G Sbjct: 51 HVGGAFAGDNNISGNDGQFLGGVQIGADYQFTRNWVVGLEAQYSWLPSNDNGGLAFPGGS 110 Query: 117 --------GGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAIGG 161 GS+ R GY LLYA G ++ G Sbjct: 111 LVTQDNRGLGSVTGRLGYTW-GPALLYAKGGYAFRDSSLDLSNTGVGVPFTTSGNHRDGY 169 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSK--------------VEGFYNTISLGVGMKF 205 T G G+E + + A++EY+ + V +T+ G+ +F Sbjct: 170 TVGAGLEY-MFAPNWSAKVEYQYYDFGNTTFTGGPPDVLGASVRNDEHTVKAGLNYRF 226 >gi|218530244|ref|YP_002421060.1| carbohydrate-selective porin OprB [Methylobacterium chloromethanicum CM4] gi|218522547|gb|ACK83132.1| Carbohydrate-selective porin OprB [Methylobacterium chloromethanicum CM4] Length = 703 Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 64/203 (31%), Gaps = 57/203 (28%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGE----------------EAHHNAG--------- 77 R P D++G YAG+ SFG G Sbjct: 36 AERARPRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDAT 95 Query: 78 ---GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS-----------------LHGIG 117 G FAG+N +D ++YG+E D+ + + Sbjct: 96 TAVGGAFAGWNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVF 155 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY------ETGKAGEITPIA----IGGTAGVGV 167 G+ R R GY ++ L+YAT G A + T +G T G GV Sbjct: 156 GAARARLGYAFGNN-LIYATAGLTGANGRVLATYPDLAGGPTATATRNVSYLGFTLGAGV 214 Query: 168 EVGGLSESLVARLEYRASKYSKV 190 + + L ++YR S + Sbjct: 215 QF-AVDPHLSLGIDYRYSDLGES 236 >gi|146340934|ref|YP_001205982.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] gi|146193740|emb|CAL77757.1| putative outer-membrane protein; putative secreted protein [Bradyrhizobium sp. ORS278] Length = 261 Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 69/221 (31%), Gaps = 50/221 (22%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + +S+AL A AAD R + YV + G Y GL+ Sbjct: 4 TALITTASVALLGLAPASAADFATRPYGK-------APPPAYVTPLPSWAGFYLGLNGGA 56 Query: 65 NGSFGEEAHHNAGG-------------------SIFAGYNVEDSCIMYGVEGDVRYTVPV 105 + S +N GG GY + + ++G+E +T Sbjct: 57 DWSRNCWTLNNVGGVPVAPRQSEGCHNASSGLIGGQVGYRWQAASWVFGLEAQGNWTDLK 116 Query: 106 LADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA---- 151 ++ + G + GY D++L Y G VA TG A Sbjct: 117 SSNASTAALAAGITNTTKTDAIGLFTGQVGYAW-DNVLWYVKGGAAVAHNKYTGTANAAA 175 Query: 152 --------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 + GGT G GVE G + + +EY Sbjct: 176 PVAVGTLLDSASETRWGGTVGTGVEY-GFAPNWSVAVEYDH 215 >gi|148255739|ref|YP_001240324.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146407912|gb|ABQ36418.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] Length = 245 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 65/212 (30%), Gaps = 48/212 (22%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSA------------------LYNGSFGEEAHHNAGGSI 80 P V ++G YAG+ + G+ + G + Sbjct: 29 PYTKAPPVVVPILSWSGIYAGIQGGGGWGTSKETFIGRFNAPGFLGTQNYNTNGGFVGGV 88 Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPV---------LADNIHSLHGIGGSLRIRGGYEVSDS 131 GYN + ++ G+EGD ++ + D + G ++ R GY V Sbjct: 89 I-GYNWQFDNLVVGLEGDYHWSDINGRSAVINAGVGDTYFTKLTSFGDIKGRLGYAV-GP 146 Query: 132 LLLYATVGPDVAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 L + + G V + G T G G E + + A+LEY Sbjct: 147 ALFFVSGGAAVGELQHRYDRAAGVFFGQNTTRWGYTVGAGAEY-MFAPNWSAKLEYNYLD 205 Query: 187 YSKVEGFY-------------NTISLGVGMKF 205 + K Y +T+ G+ F Sbjct: 206 FGKSTLQYVGVPGRSEWKDSVHTVKAGLNYHF 237 >gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1 str. 16M] gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 185 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 18/171 (10%) Query: 51 HDFNGPYAGLSALYNGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVPV 105 HD++G Y G + S + A G I G N+++ I++G E G+ Sbjct: 17 HDWSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHR 76 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 + G+ + + GY D L+Y T G V + + G G Sbjct: 77 IGHGGTLQQSWNGNAKGKVGYTF-DKTLVYGTAGYGVTRFKAKDNTTSASGCEGGVLIGA 135 Query: 166 GVEVGGLSESLVARLEYRASKYSKVEG-----------FYNTISLGVGMKF 205 GVE LS L + EY +++ V+ ++I G+ KF Sbjct: 136 GVE-QALSGPLSVKAEYDFQRFNDVKSQVNGIEQRNNLKNHSIKAGLNYKF 185 >gi|154246409|ref|YP_001417367.1| porin [Xanthobacter autotrophicus Py2] gi|154160494|gb|ABS67710.1| porin [Xanthobacter autotrophicus Py2] Length = 248 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 67/213 (31%), Gaps = 60/213 (28%) Query: 51 HDFNGPYAGLSALYNG---------------SFGEEAHHNAGG---SIFAGYNVED-SCI 91 + G Y G + Y G + N+ G GYN + + + Sbjct: 38 FSWTGFYIGANVGYGGDKFTFDEVESYYGYPYYANSTSLNSSGFFAGGQIGYNYQFANNV 97 Query: 92 MYGVEGDVRYTVPVLADNIHS---------------LHGIGGSLRIRGGYEVSDSLLLYA 136 + GVE D++++ ++ S G++R R GY D L Y Sbjct: 98 VLGVETDLQWSGIEGKEDYSSVYVYGGYPYTSSYGASVDYFGTIRARIGYAF-DRFLPYI 156 Query: 137 TVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 T G + + + + G T G GVE ++ + + EY Sbjct: 157 TGGAAYGKTKISSSYAGDGFGSLSASATNWGWTVGGGVEY-AITNNWTFKTEYLYVDLGS 215 Query: 190 -----------------VEGFYNTISLGVGMKF 205 V+ ++T+ GV KF Sbjct: 216 TDYAYADGYGYYSYAGTVDTKFHTLKAGVNYKF 248 >gi|27377123|ref|NP_768652.1| hypothetical protein bll2012 [Bradyrhizobium japonicum USDA 110] gi|27350266|dbj|BAC47277.1| bll2012 [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 35/210 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ + AL + + D + +P A D++G Y G Sbjct: 68 MKKILILTACIG-ALCAAAPSFGTDLAGQPVKVKAAPLPVAA------PIIDWSGYYMGA 120 Query: 61 SALY---------NGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLA-- 107 + + NG E H++ GG++ GY + ++YG+EG + + Sbjct: 121 NGGWGTSHNCWDFNGITSEGCHNSTGGTVGGQIGYRWQIFNMVYGLEGQGNWADFRGSNV 180 Query: 108 ------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGKA-----GEI 154 D + + G L GY +++LLY G V Y A G+ Sbjct: 181 STAFPTDTVGTTTDAFGLLTGHIGYAF-NAVLLYGKGGAAVTSNTYYVNSVATGTELGKN 239 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 + GG G G EV L+ + A +EY Sbjct: 240 NDVRWGGVLGAGAEVS-LTPNWSAGVEYNH 268 >gi|148255876|ref|YP_001240461.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146408049|gb|ABQ36555.1| putative outer-membrane protein precursor [Bradyrhizobium sp. BTAi1] Length = 237 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 35/206 (16%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG--LS 61 + + ++ + A AAD R T A + +D++G Y G Sbjct: 1 MKKLLLTTTALVVLASPALAADLAAR--------PYTKAPPPVMAAIYDWSGFYIGVNGG 52 Query: 62 ALYNGSFGEE-------AHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTV-------PV 105 + + + +H ++GG+I GY + ++GVE + + Sbjct: 53 GGWTHNTWDVVGGGREGSHDSSGGTIGGQVGYRWQMGQFVFGVEAQGNWADFAGDNQSAL 112 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIA 158 + G + GY +++L+YA G + G Sbjct: 113 FGTRNRTKTDAFGLFTGQVGYAF-NNVLVYAKGGAAITSNTYTITNAATGAFLGSNDNTR 171 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA 184 GG G G+E G + + +EY Sbjct: 172 WGGVVGAGLEY-GFAPNWSLGVEYDH 196 >gi|118593217|ref|ZP_01550602.1| outer membrane protein [Stappia aggregata IAM 12614] gi|118434108|gb|EAV40764.1| outer membrane protein [Stappia aggregata IAM 12614] Length = 251 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 18/162 (11%) Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDS 89 T T Y P + + GPY G + G + + +A +F GYN E S Sbjct: 61 TYETPLYAPTPQSLWAGPYLGFEGGVSQTVTELKSGGRTKDFSRVDAAFGLFGGYNWEVS 120 Query: 90 CIMYGVEGDVRYTVPVLA------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 + GVEG Y I + + + R G + + ++ Y ++G Sbjct: 121 RFVLGVEGGAAYLGAREKGTHPTLGAIETGSKWTINAKARVGMPIKN-VMPYLSLGIAAT 179 Query: 144 QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 + E +++G G GVEV + ++ R +Y + Sbjct: 180 EHSLKANGTERNSVSVGPVLGGGVEV-AVMDAWHLRADYSLT 220 >gi|319408066|emb|CBI81720.1| Hemin-binding protein C [Bartonella schoenbuchensis R1] Length = 287 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 77/293 (26%), Gaps = 99/293 (33%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + VS+ L + + QA + V P++ V + G Y G Sbjct: 3 MKYLITVSAFVLLAISTVQAENGT--IPQESISVTPSVI----VTPSFSWTGFYLGGQIG 56 Query: 64 --------YNGSFGEE--------------AHHNAGGSIFAGYNVEDSC-IMYGVEGDVR 100 +G + G +AG NV + GV+ D+ Sbjct: 57 IFSNKIDLSSGYLKNDDVEKWALIRKDFMPKLSGVVGGFYAGANVSLGNSFIIGVDTDMV 116 Query: 101 YTVPVLADNIHS-----------------------------------------------L 113 + + Sbjct: 117 LSDKKDIKTVKINDYGQNEELRNENTARDSEGMVAASDCGIYNENIVSKIKFATYNHILK 176 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET------------GKAGEITPIAIGG 161 G+ R+R G+ +D ++ Y G Q + T IG Sbjct: 177 QKWAGATRVRVGFA-ADHVMPYVAGGISYTQLQDVLLRSSQEQGQIVDNTVGGTGTMIGY 235 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 T G GV+ + +++ R EYR S + K N +GV KF Sbjct: 236 TLGAGVDFVMIGNTIL-RTEYRYSDFGKKQFAKSGVEHSYKTNDFRVGVAYKF 287 >gi|163867547|ref|YP_001608746.1| hemin binding protein B [Bartonella tribocorum CIP 105476] gi|161017193|emb|CAK00751.1| hemin binding protein B [Bartonella tribocorum CIP 105476] Length = 544 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 47/192 (24%) Query: 59 GLSALYNGSFGEEAHHNAGGSIFAG------YNVEDSCI-------MYGVEGDVRYT--- 102 G Y+ + H +G + + + +YG+E R Sbjct: 355 GGGYAYSHGTSQSGGHGSGARGHNANPHSRSHGAQSTQAADKNESSVYGIEQMRRMASEL 414 Query: 103 VPVLADNIHS-----LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------------- 144 D + + GG+ R+R G+ +D + Y G Q Sbjct: 415 GLEQGDEVETLDHTFKQNWGGATRVRIGFA-ADRFMPYLAGGIAYGQFQDTISISVKDEE 473 Query: 145 --KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGF 193 + + T IG T G GV+ L ++++ R EYR S + K V Sbjct: 474 GTVVSSKNLTDETKTMIGYTLGGGVDFSVL-DNVIVRAEYRYSDFGKKKFSKEKLEVNYK 532 Query: 194 YNTISLGVGMKF 205 N +GV KF Sbjct: 533 TNDFRVGVAYKF 544 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 30/140 (21%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + S +L S +A AAD + ++ V + G Y G+ A G Sbjct: 6 LITASIFSLISASTALAADVLIPHQPASST------SSTIVAPTFSWTGLYLGVQA---G 56 Query: 67 SFGEEAH--------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV 105 F +A G +AG N++ ++G++ D+ + Sbjct: 57 GFSSKADLALVGQEKSFPLDKEFSPKLSGFAGGFYAGSNIDLGDSFIFGIDTDLMLSGKK 116 Query: 106 LADNIHSLHGIGGSLRIRGG 125 I ++ G Sbjct: 117 HTKTITIGAADNITVENAVG 136 >gi|148256482|ref|YP_001241067.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. BTAi1] gi|146408655|gb|ABQ37161.1| putative outer-membrane immunogenic protein precursor [Bradyrhizobium sp. BTAi1] Length = 236 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 73/239 (30%), Gaps = 46/239 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++FL+ ++ A AAD R + P A +++ G Y G Sbjct: 1 MKRVFLSAVALTVL---AAPAFAADMPARTYTKAPVYTPPQAI-------YNWTGFYIGG 50 Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRY------TVPVLADNI 110 + N G G + G++ + + G+E + + Sbjct: 51 HLGGAFAGNNSLEGNNGRFLGGVQGGFDYQFAPNWVLGIEAQYSWMDRNTTNFGFPGATV 110 Query: 111 HSLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIG 160 S G GS+ R GY LLYA G G Sbjct: 111 VSSTGANQLGSVTGRLGYTW-GPALLYAKGGYAWRDGNALGVNVAGVPAGFTTSGNTKDG 169 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205 T G G+E + + A+ EY+ + +T+ +GV +F Sbjct: 170 YTVGGGLEY-MFAPNWSAKAEYQYYNFGNTTFTGGPAPVVGSRFNSDEHTVKVGVNYRF 227 >gi|83308664|emb|CAJ01572.1| outer membrane protein [uncultured bacterium] Length = 252 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 62/228 (27%), Gaps = 75/228 (32%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAG-----------------------GSIFAGYNVE 87 + G Y G Y S G + G GYN + Sbjct: 15 FTWTGVYLGGQIGYAWSNGSNNFNGFDPFFNRGRGVFLDSSAGGTPNGVIGGAHVGYNYQ 74 Query: 88 --------DSCIMYGVEGDVRYTV----------PVLADNIHSLHGIGGSLRIRGGYEVS 129 S ++ G+EG V T + S I GS+R R G Sbjct: 75 IPSWNWFSSSGVVIGLEGTVDGTSLSNTAIAVFPDGSNVSASSTANIQGSIRGRIGIAW- 133 Query: 130 DSLLLYATVGPDVAQKYETG--------------KAGEITPIAIGGTAGVGVEVGGLSES 175 D L+Y T G +G I+ G T G G++ ++ + Sbjct: 134 DRALIYGTGGVAFGGFETNVRFNGTDFATGAPFFASGSISSTRTGWTVGGGIDY-AITNN 192 Query: 176 LVARLEYRASKYSKV------------------EGFYNTISLGVGMKF 205 EYR + + + N + +G KF Sbjct: 193 WSIFGEYRYTNFGSIRENDFGQLPGGFTFEGSRRLQQNQVQVGFSYKF 240 >gi|156739610|gb|ABU93465.1| Omp25 [Brucella neotomae] Length = 63 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 VKQGFEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58 Query: 172 LSESL 176 L++++ Sbjct: 59 LTDNI 63 >gi|91975275|ref|YP_567934.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] gi|91681731|gb|ABE38033.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] Length = 454 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 60/188 (31%), Gaps = 35/188 (18%) Query: 47 VPIRHDFNGPYAGLSALYN-----------GSFGEEAH---HNAGGSIFAGYNVEDSCIM 92 P ++ G Y G + + G F E+ + G GYN + + + Sbjct: 245 APPPANWAGLYIGGNFGGSATARNRTTATIGGFTEQFNLSPEGFIGGGQIGYNWQAANWV 304 Query: 93 YGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 +G E D + + + G+ R R GY V S LLYAT G Sbjct: 305 FGAEADFQGSTQKDDRTAVFGSTVAYNQKLPWFGTARARLGYSV-GSTLLYATGGYAYGN 363 Query: 145 KYETGKAGEITPIAI----GGTAGVGVEVGG-----LSESLVARLEYRASKYSKVEGFYN 195 + G G GVE+ L + ++ EY + Sbjct: 364 VKTNIVTPLSNETSNRSRSGYAVGGGVEMPFSLFGLLGPNWTSKTEYLYVDLGS---TTD 420 Query: 196 TISLGVGM 203 + G+G+ Sbjct: 421 VFAGGLGV 428 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 70/229 (30%), Gaps = 49/229 (21%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + V + + S SAQAAD RA + V +D+ G Y G + Sbjct: 4 LLVGAALVGSAVSAQAADLAVRAPY----------VKAPVAAIYDWTGFYIGGNVGVGVG 53 Query: 68 FGEEAHHNAGGSI---------------FAGYNVEDSCIM----YGVEGDVRYTVPVLAD 108 ++H G + GYN + + + GVE D++ + Sbjct: 54 RNLQSHVFPAGGVANSSYLQPQGVIGGGQIGYNWQTNSVFGPLLIGVEADIQGSGMSDGR 113 Query: 109 -------------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--- 152 N + ++R R G ++ Y T G T Sbjct: 114 TTLNTLNGVLGTVNYNQKLDWFTTVRGRIGIA-RGPVVSYFTGGFAAGDVKTTVTEVGLV 172 Query: 153 --EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199 ++ G G GVE L + ++EY + T SL Sbjct: 173 PFNLSGTRTGWVIGSGVEA-ALGGNWTGKIEYLYLDLGNRTDVFGTQSL 220 >gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1] gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1] Length = 221 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 15/186 (8%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 28 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 79 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 80 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 138 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 139 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 197 Query: 192 GFYNTI 197 N I Sbjct: 198 SQVNGI 203 >gi|316934026|ref|YP_004109008.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris DX-1] gi|315601740|gb|ADU44275.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris DX-1] Length = 246 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 35/179 (19%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGS----------------FGEEAHHNAGGSIFA 82 P +P +D++G Y G + + S FGE H +GG++ Sbjct: 28 PYTKAPPIIPAMYDWSGFYIGANGGWGSSRNCWDYLGTTAAPFAAFGEGCHDASGGTVGG 87 Query: 83 --GYNVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSL 132 GYN + ++GVE + ++ S G R GY ++ Sbjct: 88 QIGYNWQVGTWVFGVEAQGNWADFKGSNASLRFTDTTNESKVDAFGLFTARVGYAW-NNA 146 Query: 133 LLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 LLY G V + + + G G G+E G + + +EY Sbjct: 147 LLYVKGGAAVTSDKYTTYRTLAGTIIDDASETRWGAAVGGGLEY-GFTPNWSFAVEYDH 204 >gi|296445958|ref|ZP_06887908.1| OmpA domain protein transmembrane region-containing protein [Methylosinus trichosporium OB3b] gi|296256476|gb|EFH03553.1| OmpA domain protein transmembrane region-containing protein [Methylosinus trichosporium OB3b] Length = 275 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 60/201 (29%), Gaps = 51/201 (25%) Query: 53 FNGPYAGLSALYNGSFG----------------------EEAHHNAGGSIFAGYNVEDSC 90 ++G Y GL+A Y ++ G GYN + Sbjct: 41 WSGFYVGLNAGYTWDERGNVLVNSPANIWAVGASGSGALATSNDGFIGGGQIGYNYQFGQ 100 Query: 91 -IMYGVEGDVRYTVPVLADNIHSL--------------HGIGGSLRIRGGYEVSDSLLLY 135 + GVE D++ + G++R R GY +S +LLLY Sbjct: 101 TFVVGVEADIQGVGGSNSSATVGNFVTPVSSAITASKQLDYLGTVRGRAGYLISPTLLLY 160 Query: 136 ATVGPDVAQKYETGKAGE-------------ITPIAIGGTAGVGVEVGGLSESLVARLEY 182 T G Q + + +G TAG GVE + A+ EY Sbjct: 161 GTGGVAYGQANLNATVTQTGLNGATGSATVGFSDTRVGWTAGGGVEWLFM-PQWSAKAEY 219 Query: 183 RASKYSKVEGFYNTISLGVGM 203 + GV + Sbjct: 220 LYYDLGRASASNTLAFQGVNV 240 >gi|146340932|ref|YP_001205980.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] gi|146193738|emb|CAL77755.1| putative outer-membrane protein; putative secreted protein [Bradyrhizobium sp. ORS278] Length = 250 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 34/176 (19%) Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV---------LADNIH 111 + + G+ + + G + GYN + I++G+EGD + D Sbjct: 70 AVGFAGTQRYDINGGFAGGVI-GYNWQVDNIVFGLEGDYHWADISGRSTEINLGAGDTYF 128 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------EITPIAIGGTA 163 + G ++ R G+ + L + + G V AG + G T Sbjct: 129 TKLRGFGDIKGRLGWA-AGPALFFVSGGAAVGDLQHRYDAGLFGPAFSASQSDWRWGWTI 187 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFY--------------NTISLGVGMKF 205 G G E +++ A++EY + K Y +T+ +GV F Sbjct: 188 GAGAEY-MFAQNWSAKVEYNYLDFGKSTLQYTPVAANRSEWNDTVHTVKVGVSYHF 242 >gi|163867546|ref|YP_001608745.1| hemin binding protein A [Bartonella tribocorum CIP 105476] gi|161017192|emb|CAK00750.1| hemin binding protein A [Bartonella tribocorum CIP 105476] Length = 290 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 22/120 (18%) Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD------------VAQKYETGKAGEI 154 ++ + G+ R+R G+ +D ++ Y G VA K + + + Sbjct: 172 SEGVGFKQKWAGATRVRVGFAAADRIMPYVAGGVAYTQLEAAHGQVKVADKTFSAGSSDE 231 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205 T +G T G G++ ++++++ R EYR S Y K + F N +GV KF Sbjct: 232 TATMVGFTIGGGIDF-AMTDNVLLRAEYRYSDYGKKKFFAKEKEYNFKTNDFRVGVAYKF 290 Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 16/85 (18%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH---------------HNAGGSIF 81 ++P + G Y G S + G + Sbjct: 26 IIPHEVAPVITAPSFSWTGFYIGGQIGGFSSKIDLKDKDKDTSVFKDLSPKLSGLIGGFY 85 Query: 82 AGYNVEDSC-IMYGVEGDVRYTVPV 105 AG N + I+ GVE DV ++ Sbjct: 86 AGSNFDLGNGIILGVETDVIWSGKK 110 >gi|316932401|ref|YP_004107383.1| putative outer-membrane immunogenic protein [Rhodopseudomonas palustris DX-1] gi|315600115|gb|ADU42650.1| putative outer-membrane immunogenic protein precursor; putative secreted protein [Rhodopseudomonas palustris DX-1] Length = 235 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 39/202 (19%) Query: 39 PTIATNRYVP-IRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE 87 P Y P +++ G Y G G+F + G G + AGY+ + Sbjct: 28 PYTKAPAYAPAPIYNWTGFYIGGHIG--GAFSGDNSIGTGVTASDNGKFLGGVQAGYDWQ 85 Query: 88 D-SCIMYGVEGDVRYTVPVLA-----DNIHSLHGIG------GSLRIRGGYEVSDSLLLY 135 + GVEG + D + + + S+ R GY LLY Sbjct: 86 FAPNWVLGVEGQYSWLSGTNQSVAFVDGLGNSYLFSDNQRGLASVTGRLGYTW-GPALLY 144 Query: 136 ATVGPDVAQ----KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV- 190 G A G + G T G G+E + + ++EY+ + V Sbjct: 145 VKGGWAYADYSTSLTVNGFGVAVDSKTDGYTVGGGLEYL-FAPNWSGKIEYQYYDFGNVN 203 Query: 191 -------EGFYNTISLGVGMKF 205 + + + G+ +F Sbjct: 204 LGNGFSAKNDEHVVKAGLNYRF 225 >gi|148255736|ref|YP_001240321.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146407909|gb|ABQ36415.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] Length = 248 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 16/146 (10%) Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI---------HSL 113 + G+ + + G + GYN + I++G+EGD + + + Sbjct: 72 GFAGTQRYDINGGFAGGVI-GYNWQVDNIVFGLEGDYHWADINGRSGVITAGLGDSYFTK 130 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI----GGTAGVGVEV 169 G ++ R G+ + L + + G V + I G T G G E Sbjct: 131 LRGFGDIKGRLGWA-AGPALFFVSGGAAVGDLQHRYDNPAFSTIQNDWRWGWTIGAGAEY 189 Query: 170 GGLSESLVARLEYRASKYSKVEGFYN 195 + + A++EY + K YN Sbjct: 190 -MFAPNWSAKVEYNYLDFGKSTLQYN 214 >gi|126729809|ref|ZP_01745622.1| outer membrane protein, putative [Sagittula stellata E-37] gi|126709928|gb|EBA08981.1| outer membrane protein, putative [Sagittula stellata E-37] Length = 220 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 70/212 (33%), Gaps = 24/212 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K L + V+ AL + SA + D T ++ G Y GL Sbjct: 26 MKKHILTMTVAIAALGTAASAGSLDVTPVEPAPM-----TPVEVVPAAPVGNWTGGYTGL 80 Query: 61 S-ALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIGG 118 S S G + GY+ + I+ G E + + + + Sbjct: 81 SLGGAQASSGGSEESGMIYGLHGGYDYQFGNGIVLGGEAEFQGNNDLSVNGFDV--DNVS 138 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178 + R GY++ L+Y T G GE T G+G+E +++ Sbjct: 139 RAKARMGYDL-GQALVYGTAGVS----KVNTSIGEATSPVY----GLGMEY-KVTDKFSV 188 Query: 179 RLEYRASKYS-----KVEGFYNTISLGVGMKF 205 EY + + +++SL +F Sbjct: 189 GAEYLNEDFQDLGSTNTDLQQDSLSLRGNFRF 220 >gi|312113917|ref|YP_004011513.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC 17100] gi|311219046|gb|ADP70414.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC 17100] Length = 292 Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 66/251 (26%), Gaps = 80/251 (31%) Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-------- 66 + + SA AAD R G + G Y G Sbjct: 1 MVAGNSALAADLYGRGGGLKDGPFYEAPAL--------WQGFYLGGHVGAAWSKADVDDT 52 Query: 67 --------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-------- 110 G+ + G GYN + ++GVEGD+ Y + ++ Sbjct: 53 FIYVGDPTYKGDLNTTSLTGGGQLGYNFQRGNFVFGVEGDIGYLKVDASKDVAFRPTSCV 112 Query: 111 -----------------------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY- 146 + + G + R GY D L YA G Sbjct: 113 GTYTSAPYTVNYDPKMCAVDTKYSASGDLYGDITGRLGYAF-DRTLFYAKGGVAFLNGEF 171 Query: 147 ----------------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 + + +G T GVGVE L+ S + EY+ Sbjct: 172 DAKYLGQNCASLGSDSHCLGNALSKFDYSHSETLVGWTIGVGVEY-KLTPSWSLKAEYQH 230 Query: 185 SKYSKVEGFYN 195 + + YN Sbjct: 231 FNFGSISYSYN 241 >gi|91975321|ref|YP_567980.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] gi|91681777|gb|ABE38079.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] Length = 242 Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 50/211 (23%) Query: 39 PTIATNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNV 86 P Y P +++ G Y G G+F + G G + AGY+ Sbjct: 28 PYNKAPVYAPPVPIYNWTGFYIGGHIG--GAFAGDNSIGTGVTANSDGKFLGGVQAGYDW 85 Query: 87 ED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG--------------GSLRIRGGYEVSDS 131 + + GVEG +Y+ +++ + +G S+ R GY Sbjct: 86 QFAPSWVLGVEG--QYSWLSGSNDAVAFTVVGQPGTYTFSDNQRGLASVTGRLGYTW-GP 142 Query: 132 LLLYATVGPDVAQKYET---------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 LLY G A + T G T G G+E +++ ++EY Sbjct: 143 ALLYVKGGWAYADYKSSLTFTAPGGAAVGVSSTSSQDGYTVGAGLEYL-FAQNWSGKIEY 201 Query: 183 RASKYSKVE--------GFYNTISLGVGMKF 205 + + V+ + + G+ +F Sbjct: 202 QYYDFGNVDLGAGFTAKNDQHVVKAGLNYRF 232 >gi|156739632|gb|ABU93476.1| Omp25 [Brucella neotomae] Length = 63 Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 GI GSLR R GY++ + ++ Y T G +Q + + +G TAG G+E Sbjct: 1 VKQGIEGSLRARVGYDL-NLVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-K 58 Query: 172 LSESL 176 L++++ Sbjct: 59 LTDNI 63 >gi|86749831|ref|YP_486327.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86572859|gb|ABD07416.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 243 Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 32/186 (17%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSF---------------GEEAHHNAGGSIFA 82 T A + +D++G Y G + + S G A Sbjct: 28 PYTKAPPPMIVAIYDWSGFYIGANGGWGTSRKSWDFYAPGALLLSEGSHDASGATAGGQV 87 Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLL 134 GYN + ++GVE + ++ + HS G R GY ++ LL Sbjct: 88 GYNWQMGSWVFGVEAQGNWADFKGSNVTLLGGLFDNHSKVEAFGLFTGRVGYAW-NNALL 146 Query: 135 YATVGPDVAQKY-------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 YA G V + G + G + G G+E G + + +EY Sbjct: 147 YAKGGAAVVNDKYEFVRRADGLVTGTASETRWGASVGAGLEY-GFTPNWSFAVEYNHLFL 205 Query: 188 SKVEGF 193 K + Sbjct: 206 DKKDVT 211 >gi|319408046|emb|CBI81700.1| Outer membrane protein, omp25/ropB family [Bartonella schoenbuchensis R1] Length = 273 Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 78/272 (28%), Gaps = 89/272 (32%) Query: 3 KLFLAVGVSSLALASFCSAQAA--DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 + + + +L L S +A+ ++ +VP + G Y G Sbjct: 1 MIRCLIIICALTLFSTSVVRASGYMVIQE------------PMPVFVPSTFSWEGLYLGG 48 Query: 61 SAL------------YNGSFGEEAHH-----------NAGGSIFAGYNVE--DSCIMYGV 95 +G G +AG N+ D+ ++ V Sbjct: 49 QVGGALGKLSVSSRVISGKNTVTKKSQIVSSDKYNLAGFIGGFYAGSNLRLDDNGLILSV 108 Query: 96 EGDVRYT--------------------------------------VPVLADNIHSLHGIG 117 + D+ ++ + N Sbjct: 109 DTDIVWSNQKNVQFGKRMIVGDQSARVHNALVSRFGHKKSGLVKVGDEVTYNTTRKEKWA 168 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAGVGV 167 G+ R+R G+ +D ++ Y G + T IG T G GV Sbjct: 169 GATRVRFGFA-ADRIMPYIAGGIAYTKVQITPWFLVNSANPLNLMTEKKAMIGYTLGAGV 227 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISL 199 +S++++ R EYR S + K + + +++ Sbjct: 228 NF-AVSDNVILRGEYRYSDFGKKKFMESPVNV 258 >gi|39935882|ref|NP_948158.1| outer membrane protein [Rhodopseudomonas palustris CGA009] gi|39649736|emb|CAE28257.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 288 Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 37/194 (19%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF----------------GEEAHHNAGG--SI 80 P + +D++G Y G + + S GE H +GG Sbjct: 64 PYTKAPPIIAAAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGG 123 Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSD 130 GYN + S ++GVE + ++ + G R GY + Sbjct: 124 QVGYNWQISTWVFGVEAQGNWADFKGSNANLLVIPAPTTNQTKIDAFGLFTARVGYAW-N 182 Query: 131 SLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183 + L+Y G V + + + G T G G+E G + S +EY Sbjct: 183 NALIYVKGGAAVTSDKYTRFRTATGVFNDDASETRWGATVGTGLEY-GFTPSWSFAVEYD 241 Query: 184 ASKYSKVEGFYNTI 197 + ++ + Sbjct: 242 HLFLGGRDLTFSPV 255 >gi|154246408|ref|YP_001417366.1| porin [Xanthobacter autotrophicus Py2] gi|154160493|gb|ABS67709.1| porin [Xanthobacter autotrophicus Py2] Length = 250 Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 45/189 (23%) Query: 51 HDFNGPYAGLSALYNG--------------------SFGEEAHHNAGGSIFAGYNVED-S 89 + G Y G + Y G + GYN + + Sbjct: 38 FSWTGFYIGANVGYGGDKFTFDEVESYYYGAYPYYANSTSLNSSGFFAGGQIGYNYQFAN 97 Query: 90 CIMYGVEGDVRYTVPVLADNIHS---------------LHGIGGSLRIRGGYEVSDSLLL 134 ++ GVE D++++ ++ S G++R R GY D L Sbjct: 98 NVVLGVETDLQWSGIEGKEDYSSVYIYGGYPYTSSYGASVDYFGTIRARIGYAF-DRFLP 156 Query: 135 YATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 Y T G + +G + + + G T G GVE ++ + + EY Sbjct: 157 YITGGAAYGKTKVSGSYAGEGFGSFDSSSTNWGWTVGGGVEY-AITNNWTFKTEYLYVDL 215 Query: 188 SKVEGFYNT 196 + Y + Sbjct: 216 GSTDYTYGS 224 >gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis M163/99/10] gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis M292/94/1] gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1] gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1] gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1] gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1] gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1] Length = 211 Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 15/186 (8%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AH 73 SA AAD + + V HD++G Y G + S + Sbjct: 18 FAGSAFAADMMGGTDYTYNDPVAAGP--------HDWSGNYVGARVGGSSSKFPSPFASR 69 Query: 74 HNAGGSIFAGYNVEDSCIMYGV--EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 A G I G N+++ I++G EG+ + G+ + + GY D Sbjct: 70 TGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAF-DK 128 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L+Y T G V + G G GVE LS L + EY +++ V+ Sbjct: 129 TLVYGTAGYGVTRFKAKDNTTSAPGWEGGVLIGAGVE-QALSGPLSVKAEYDFQRFNDVK 187 Query: 192 GFYNTI 197 N I Sbjct: 188 SQVNGI 193 >gi|163868669|ref|YP_001609878.1| hemin binding protein E [Bartonella tribocorum CIP 105476] gi|161018325|emb|CAK01883.1| hemin binding protein E [Bartonella tribocorum CIP 105476] Length = 309 Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 21/112 (18%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-----------GKAGEITPIAIGG 161 G+ R+R G + ++ Y G Q + K ++T +G Sbjct: 200 KQKWTGATRVRLGLS-AHRVMPYIAGGIAYGQFQDVLSTVITGDESFNKTSDVTKTMVGY 258 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGMKF 205 T G GV+ ++++LV R EYR S + K + N G+ KF Sbjct: 259 TLGGGVDF-AMTDNLVVRAEYRYSDFGKKKFKDEIEIKYKTNDFRAGIAYKF 309 Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 36/148 (24%), Gaps = 36/148 (24%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYNG 66 + S +L S QAAD V + + ++G Y G ++ Sbjct: 6 ITASVFSLISPSILQAADVVAPEEPVH------VVSEVVTSSDFSWSGFYFGGQIGGFSS 59 Query: 67 SFGEEAHH----------------------------NAGGSIFAGYNVEDS-CIMYGVEG 97 G ++AG N + ++ G++ Sbjct: 60 KISGTTRDVDTPLYPDEESKNKPWVPLEKQYKPELSGFVGGLYAGVNFDLGNNLIVGLDT 119 Query: 98 DVRYTVPVLADNIHSLHGIGGSLRIRGG 125 D+ T S G Sbjct: 120 DILLTEKKDTKTFIHTEESSASGSGTEG 147 >gi|27380404|ref|NP_771933.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27353568|dbj|BAC50558.1| bll5293 [Bradyrhizobium japonicum USDA 110] Length = 277 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 73/247 (29%), Gaps = 69/247 (27%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K LAV + + S QAAD + +++ G Y G Sbjct: 1 MKKFLLAV---ASVVLGTASVQAADLAAHYTKAPM-----------MAPAYNWTGFYVGG 46 Query: 61 SALYNGSFGEEA----------------------------HHNAGGSIFAGYNVEDSCIM 92 + + + + G AGYN + + + Sbjct: 47 NVGGQWGSSDPSTSTVFSPTGYFAASSVPAINTVGAQGINSSSVTGGFTAGYNWQVNHAV 106 Query: 93 YGVEGDVRYTVPVLAD----------------NIHSLHGIGGSLRIRGGYEVSDSLLLYA 136 G+EGD+ Y + + ++R R G+ + + LLYA Sbjct: 107 LGLEGDINYFGFKGSATGSALYPCCAPTGFTVSSSVSADWLATIRGRIGFLAAPTWLLYA 166 Query: 137 TVGPDVAQKYET----------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 T G +A+ ++ I +G TAGVG E + EY Sbjct: 167 TGGAAIAEVKGNFNFTDTFAGATESSAIRDTRLGWTAGVGTEY-AFGGGWSLKAEYLYVD 225 Query: 187 YSKVEGF 193 + Sbjct: 226 LGRASAT 232 >gi|86751658|ref|YP_488154.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86574686|gb|ABD09243.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 238 Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 62/201 (30%), Gaps = 40/201 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVED-S 89 +++ G Y G G+F + G G + GY+ + Sbjct: 32 APVYAPPAPIYNWTGFYIGGHIG--GAFAGDNSIGTGVTAGSDGKFLGGVQVGYDWQFAP 89 Query: 90 CIMYGVEGDVRYTVPVLADNIHSLHGIGG------------SLRIRGGYEVSDSLLLYAT 137 + GVEG + ++ G+ G S+ R GY LLY Sbjct: 90 SWVLGVEGQYSWLSGTNDAVSFTVPGVAGTYTYADNQRGLASVTGRLGYTW-GPALLYVK 148 Query: 138 VGPDVAQ-----KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE- 191 G A T G T G G+E +++ ++EY+ + V+ Sbjct: 149 GGWAYADYTSSLTLSGVGTVSSTSSQDGYTVGGGLEYL-FAQNWSGKIEYQYYDFGNVDL 207 Query: 192 -------GFYNTISLGVGMKF 205 + + G+ +F Sbjct: 208 GAGFTAKNDQHVVKAGLNYRF 228 >gi|27377055|ref|NP_768584.1| hypothetical protein bll1944 [Bradyrhizobium japonicum USDA 110] gi|27350198|dbj|BAC47209.1| bll1944 [Bradyrhizobium japonicum USDA 110] Length = 825 Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 68/231 (29%), Gaps = 61/231 (26%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------H 74 D + +G P + ++ G Y G + A Sbjct: 598 DTAQAKANGIDKEPPPVMPT-------NWAGVYLGGTIGAGKGRSHYADPFPTPVSGDYA 650 Query: 75 NAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPVLADNIHSLH-------GIG------- 117 + GG++F G N + + G+E Y V N G Sbjct: 651 DLGGAMFGGQIGINYQTGSWVLGLEAS-GYWANVQGTNTCFGAFPSPQIAGFNCGSQIDA 709 Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-------GGTAGVGVEV 169 G+L R GY D LLY G ++ G I+ + G T G G+E Sbjct: 710 LGALTGRVGYAF-DRTLLYVKGGSAWDRQTNQFNTGGISGTILTNGNTNWGWTVGGGLEY 768 Query: 170 GGLSESLVARLEYRASKYSKV----------------EGFYNTISLGVGMK 204 L + LEY+ + K T+SLGV K Sbjct: 769 -ALLPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYK 818 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 60/221 (27%), Gaps = 53/221 (23%) Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSAL---------- 63 + A AAD V T P ++ G Y G Sbjct: 71 AGLYGPAHAADLP----------VKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQT 120 Query: 64 ---------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE-----GDVRY--TVPVLA 107 G G G G N + + G+E DV A Sbjct: 121 ATGLQADFSNRGFPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANRA 180 Query: 108 DNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------E 153 DN + + G++ R G + LL+Y G A + Sbjct: 181 DNRYGVISFTCDNRVTSLGTIAGRLGQTWGN-LLIYGKAGAAWATDESDARTSHYINKFN 239 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G G+G+E S +L A +EY + + Y Sbjct: 240 QSGTRWGWMGGLGLEY-AFSPNLSAFVEYDHFDFGSKDSNY 279 >gi|146339995|ref|YP_001205043.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. ORS278] gi|146192801|emb|CAL76806.1| conserved hypothetical protein; putative outer-membrane immunogenic protein precursor; putative secreted protein [Bradyrhizobium sp. ORS278] Length = 237 Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 74/238 (31%), Gaps = 47/238 (19%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 + AV +++LA+ A AAD R + + P A +D+ G Y G Sbjct: 3 RVFLSAVALTALAV----PAFAADMPARTYTKAPPMTPPQAI-------YDWTGFYIGGH 51 Query: 62 ALYNGSFGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRY------TVPVLADNIH 111 + G N G + G++ + + G+E + + Sbjct: 52 LGGAFAGGNGLEGNNARFLGGVQGGFDYQFAPNWVLGIEAQYSWMDRNTTNFGFPGATVV 111 Query: 112 SLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGG 161 + G GS+ R GY LLYA G G Sbjct: 112 TSTGANQLGSVTGRLGYTW-GPALLYAKGGYAWRDGNGLGVNVAGVPAGFTTSGNAKDGY 170 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGF--------------YNTISLGVGMKF 205 T G G+E + + A+ EY+ + +T+ +GV +F Sbjct: 171 TVGAGLEY-MFAPNWSAKAEYQYYNFGNTTFTGGPAPVVGSRFNNEDHTVKVGVNYRF 227 >gi|312114546|ref|YP_004012142.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311219675|gb|ADP71043.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100] Length = 250 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 80/224 (35%), Gaps = 41/224 (18%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + L + + A+A SA AAD R GG P +AT + G YAG++ Sbjct: 1 MIRLGIIGTVSAIALTVSANAADLYRAPAGGGLKDAPYVAT---------WTGFYAGVNG 51 Query: 63 LYNGSFGEE--------------AHHNAGGSIFAGYNVE---DSCIMYGVEGDVRYTVPV 105 Y S + + G GYN++ ++ G+E D++ + Sbjct: 52 GYAWSQSSDQLAYVDPNYPFYGLSPEGGFGGGQIGYNLQGFVHPNLVLGIEADIQGSDIS 111 Query: 106 LAD------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------- 152 + S G++R R GY + DS L+YAT G A Sbjct: 112 DSGVDSATYKYSSKVDWFGTVRGRLGYAI-DSALVYATGGFAYGGIKNDYDARHLGAGEF 170 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 + A G G GVE L+ + + EY+ K + Sbjct: 171 KFDGNATGYVVGGGVEY-KLAPAWSLKAEYQYINLGKNNPVDTS 213 >gi|316933367|ref|YP_004108349.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1] gi|315601081|gb|ADU43616.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1] Length = 240 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 72/238 (30%), Gaps = 41/238 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M + + ++ +A A AAD P + + +++ G Y G Sbjct: 1 MTTMKNTLLGAAAVIALSAPAFAADLP---PRPYTKAAPAYTAPQ---VVYNWTGFYVGG 54 Query: 61 SALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGI 116 + N+G G + G + + + + G+E + I Sbjct: 55 HVGGAWAGDNSIPGNSGRFFGGVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGST 114 Query: 117 G-------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--------GG 161 GS+ R GY L+YA G P A G Sbjct: 115 AVEDTRGLGSVTGRLGYAW-GPTLVYAKGGYAWRDSDLGVATAAGFPAAYTTSGSRNDGY 173 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205 T G G+E + S A++EY+ K+ +T+ G+ +F Sbjct: 174 TVGAGLEYL-FAPSWSAKVEYQYYKFGDTTFTGGPADVVGTSFRNDEHTVKAGINYRF 230 >gi|148258469|ref|YP_001243054.1| hypothetical protein BBta_7274 [Bradyrhizobium sp. BTAi1] gi|146410642|gb|ABQ39148.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 693 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 76/231 (32%), Gaps = 68/231 (29%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG--------------------- 78 + V D+ G Y G Y + A G Sbjct: 35 PLPVQASVSSIFDWTGFYVGTHFGYAAGASNWSATQADGSAPRLMGRLDFYPQYDAFKGT 94 Query: 79 -----SIFAGYNVEDSC-IMYGVEGDVRYTVPVLAD-------NIHSLHG----IGGSLR 121 + AGYN + + ++ GVE D+ + V A + +G GS+R Sbjct: 95 GSFSSGLQAGYNYQAASRLLLGVEADISFPNSVSATQTFSTTLGDQASYGETVLHAGSVR 154 Query: 122 IRGGYEVSDSLLLYATVGPD---------------VAQKYETGKAGEITPIAIGGTAGVG 166 R GY D+ L+Y T G + G + + +G AG G Sbjct: 155 GRVGYAF-DNWLVYGTGGFGWSFDQFTRTQLMGSPMGGSAVPGTLEKHSLWRLGWVAGAG 213 Query: 167 VEVGGLSESLVARLEYRASKYSKV-------------EGFYNTISLGVGMK 204 VE+ ++ S A+LEY S++ + ++I LG+ + Sbjct: 214 VELP-VAPSWTAKLEYLLSEFGGQSISFPAGAQKFEGDYASHSIRLGLNYQ 263 >gi|91977701|ref|YP_570360.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] gi|91684157|gb|ABE40459.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] Length = 237 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 41/231 (17%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + ++ A A AAD G R + +++ G Y G + + Sbjct: 5 LLSAAAVFALTAPAFAADL------GPRTYTKAPPVYTPPEVVYNWTGFYIGGNVGGAFA 58 Query: 68 FGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------ 117 +AG G + G++ + + G+E + + L + Sbjct: 59 GSNNIQSDAGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVLFPLGSVATENTRG 118 Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--------GGTAGVGVE 168 GS+ R GY LLYA G A G T G G+E Sbjct: 119 LGSVTGRLGYSW-GPALLYAKGGYAFRDSSLGVNTAAGVQSAYTTSGNRNDGYTVGAGLE 177 Query: 169 VGGLSESLVARLEYRASKYSKVE--------------GFYNTISLGVGMKF 205 + S A++EY+ K+ +T+ G+ +F Sbjct: 178 Y-MFAPSWSAKVEYQYYKFDNTSFTGGPADVVGTTFRNDDHTVKAGINYRF 227 >gi|323136580|ref|ZP_08071661.1| FecR protein [Methylocystis sp. ATCC 49242] gi|322397897|gb|EFY00418.1| FecR protein [Methylocystis sp. ATCC 49242] Length = 438 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 49/164 (29%), Gaps = 29/164 (17%) Query: 52 DFNGPYAGLSALYNGSFGEEAH------HNAGGSIFAGYNVED-SCIMYGVEGDVRYTVP 104 ++ G G + E A G + GYN + I+ G E D Y Sbjct: 231 NWGGLSIGFNVGTAIGNAEFADPVPMNGVGFLGGLKLGYNWQVLPNIVAGFETDAEYRSE 290 Query: 105 VLADNIHSLH------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG--------- 149 + G G+ R R GY + L+Y T G Sbjct: 291 IGGSTNGHGTVSSTRGGYLGTFRGRLGYAF-NRWLVYGTGGLAYGHIIAPRTFSGANLLG 349 Query: 150 -----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 + P G T G GV+ L+ ++ + EY K Sbjct: 350 PAYAFGTSQNNPFLAGWTVGGGVQF-ALTSNISVKAEYLYVKLQ 392 >gi|75677151|ref|YP_319572.1| hypothetical protein Nwi_2970 [Nitrobacter winogradskyi Nb-255] gi|74422021|gb|ABA06220.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 276 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 89/289 (30%), Gaps = 97/289 (33%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L LA + A A AAD P+++T R V + G Y G Sbjct: 1 MRRLLLAAVICGAA----HGAYAADMPDDFPFLRGSQPPSLSTVRTV-----WQGFYIGG 51 Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88 A Y + G ++ N+G F GYN++ Sbjct: 52 QASYGSADMDFKNSGKDLLERLLNHVDVESQFNLSSWPLGGTSSNRNSGFGGFLGYNLQM 111 Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIG------------------------GSLRIRG 124 +++GVE YT G GSLR+R Sbjct: 112 EDVVFGVEA--NYTHSKFLGASSGSQGRSFSYPADYRTSAFVQSNASMQIMDFGSLRVRA 169 Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAG---------------------------EITPI 157 GY + S L YA G + Q A Sbjct: 170 GYSL-GSFLPYAFGGVAMGQANIRRNASYNLHYQYVGTQIPPLPNLAGGGSLSDNANAHF 228 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205 G AG+G++ + + L R E+ +++ V+ NT+ G G +F Sbjct: 229 IYGYAAGLGID-MMIVDGLFLRAEWEFLRFTAPVDTIVNTVRAGAGYRF 276 >gi|83308663|emb|CAJ01571.1| outer membrane protein [uncultured bacterium] Length = 276 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 72/246 (29%), Gaps = 67/246 (27%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M + FL V ++AL +A AAD RA P I + G Y G Sbjct: 1 MYRKFLLASVGAIALTG-SAAFAADLPSRAPPPVYLPPPPI---------FTWTGFYIGG 50 Query: 61 SALYNGSFGEEAHHNAG--------------------GSIFAGYNVE--------DSCIM 92 G + G G++ + S ++ Sbjct: 51 QVGGAWGTGGSSFTAFDAVTGRFVDASFGGGNPSGVIGGGHIGFDYQIPTWNWFSSSGVV 110 Query: 93 YGVEGDVRYTVPVLADNI--------------HSLHGIGGSLRIRGGYEVSDSLLLYATV 138 GVEG V + + + I GS+R R G D +L+YAT Sbjct: 111 IGVEGSVDGSSLSKTTTVTLPGIFLNNGFATARTSADIQGSIRGRLGIAW-DRVLVYATG 169 Query: 139 GPDVA--------QKYETGKAG-----EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 G + + G T G G+E L+ + EYR + Sbjct: 170 GVAFGGINSDIQVNGVDAAGVPFFGQRNRSNDRTGWTVGGGIEY-ALTPNWSVGAEYRFT 228 Query: 186 KYSKVE 191 + + Sbjct: 229 DFGTIS 234 >gi|49473905|ref|YP_031947.1| hemin binding protein b [Bartonella quintana str. Toulouse] gi|21689905|gb|AAM68130.1| hemin-binding protein B [Bartonella quintana] gi|49239408|emb|CAF25746.1| Hemin binding protein b [Bartonella quintana str. Toulouse] Length = 453 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 41/181 (22%) Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIM-------YGVE------GDVRYTVPVLADNI 110 ++ + GGS AG + + + YG+E + A+ + Sbjct: 275 HSHRVNNPHGNPHGGSSAAGRSAQGEQTVNEKSASVYGIEEVKKVAASLGVDQGGRAETL 334 Query: 111 HS--LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---------------E 153 G+ R+R G+ +D ++ Y G Q + Sbjct: 335 THTLKQNWAGATRLRIGFA-ADRIMPYVAGGIAYTQLQDIVSISLKEQDGEAVSRKNLTN 393 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMK 204 T IG T G G++ ++++++ R EYR S + K V N +GV K Sbjct: 394 ETKTMIGYTLGGGIDF-AMTDNVLLRAEYRYSGFGKKKFAKEKLEVNYKTNDFRIGVAYK 452 Query: 205 F 205 F Sbjct: 453 F 453 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + VS AL S +AQAAD G + + G YAG+ G Sbjct: 6 LITVSIFALVSASAAQAADV------GIPHQSAPTSLPVIAAPAFTWTGFYAGIQI---G 56 Query: 67 SFGEEAHHNAGG--------------------SIFAGYNVEDS-CIMYGVEGDVRYTVPV 105 F + + G ++AG N++ ++ ++ D+ ++ Sbjct: 57 GFSSKTDMSIVGKGKSVLLSKDLLPKLSGFESGLYAGSNIDLGDNFIFNIDTDLIWSGQK 116 Query: 106 LADNIHSLHGIGGSL-----RIRGGYEVSDSLL 133 I S+ R R + + LL Sbjct: 117 YTKTIALGASDNVSVDNLVTRSRRSLRLENQLL 149 >gi|115526777|ref|YP_783688.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115520724|gb|ABJ08708.1| OmpA domain protein transmembrane region-containing protein [Rhodopseudomonas palustris BisA53] Length = 228 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 29/190 (15%) Query: 43 TNRYVP-IRHDFNGPYAGLSAL--------YNGSFGEEAHHNAGGSIFAGYNVED-SCIM 92 Y P +++ G Y G G + GY+ + + Sbjct: 31 APAYAPAPIYNWTGFYIGGHIGGAFVGDDSIATGVTRNNDGTFLGGVQGGYDYQFAPNWV 90 Query: 93 YGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYATVGPDVAQ-- 144 +G+E + + + GS+ R GY LLYA G A Sbjct: 91 FGIEAQYSWLDSGTDPVLVGAYSFSDKQKGLGSVTGRIGYTW-GPALLYAKGGYAFADYD 149 Query: 145 --KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE-------GFYN 195 G ++ + G T G G+E + S A++EY+ + V+ + Sbjct: 150 TTVTLGGVGAAVSSKSDGYTVGGGLEYL-FAPSWSAKVEYQYYDFGNVDFGTFSVKNDEH 208 Query: 196 TISLGVGMKF 205 + G+ +F Sbjct: 209 VVKAGLNYRF 218 >gi|49475068|ref|YP_033109.1| hemin binding protein b [Bartonella henselae str. Houston-1] gi|49237873|emb|CAF27069.1| Hemin binding protein b [Bartonella henselae str. Houston-1] Length = 391 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 41/191 (21%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCI-------MYGVE---GDVRYTV 103 NG Y ++ A + G AG + + + +YG+E + Sbjct: 203 NGAYPHSMGAHSHVANPHASNPHGTQNMAGRTTQSTKVAEKNASGIYGIEQVKKEAYEHG 262 Query: 104 PVLADNIHS-----LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE----------- 147 N+ + G+ R+R G+ V D ++ Y G AQ ++ Sbjct: 263 LSQYGNVETLSHTLKQNWAGATRVRVGFSV-DRVMPYFAGGIAYAQLHDTISISIKKNDE 321 Query: 148 ----TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------- 194 + + IG T G GV+ ++++++ R EYR S + K + Sbjct: 322 SVVTSKNLTDEKKTMIGYTLGGGVDF-AMTDNVLLRAEYRYSDFGKKKFAKEKLEINYKT 380 Query: 195 NTISLGVGMKF 205 N +GV KF Sbjct: 381 NDFRVGVAYKF 391 Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 30/135 (22%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + VS AL + +A AAD G A+ + G YAG+ A G Sbjct: 6 LITVSIWALIAASTAHAADV------GIPRQSVLAASPVITAPTFTWTGFYAGIQA---G 56 Query: 67 SFGEEAH--------------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPV 105 F + G +AG N+ ++GV+ D+ + Sbjct: 57 GFSSKTDLSIVGKDKTVPLSKDLSPKLSGFEGGFYAGSNINLGDDFIFGVDTDLTLSGQK 116 Query: 106 LADNIHSLHGIGGSL 120 I ++ Sbjct: 117 HTKTIIIGVDDNAAV 131 >gi|110633591|ref|YP_673799.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1] gi|110284575|gb|ABG62634.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1] Length = 234 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 57/207 (27%), Gaps = 39/207 (18%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG------------- 66 SA AAD V D+ G Y G + Sbjct: 16 SAFAADAVYGDVPAAPVA-------EVAAESFDWTGLYLGAFGGVSTGDFKYEAGPTGGD 68 Query: 67 --SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT----------VPVLADNIHSLH 114 + + G GY+ + + G D+ T + S Sbjct: 69 PLGGIDISGGGFIGGAQVGYDWQIGNWVIGGVADIAATNHDADISADIDGFGSAEAESKL 128 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-----EITPIAIGGTAGVGVEV 169 G++R R GY D L+Y G + + G + G TAG GVE Sbjct: 129 KYLGTVRARAGYSF-DRTLVYGHGGFAYGETEQKIDLGGTELFNESQGRTGWTAGAGVEF 187 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNT 196 ++ + EY + F + Sbjct: 188 -AVTNRISVGTEYSYVDLGEERVFEDA 213 >gi|319409089|emb|CBI82733.1| Hemin binding protein b [Bartonella schoenbuchensis R1] Length = 367 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 25/115 (21%) Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE--------------TGKAGEITPIAI 159 G+ R+R G+ V+D ++ Y VG AQ + + + T + + Sbjct: 255 QKWSGATRMRIGF-VADRIMPYIAVGVTYAQLQDIFSRSVEVAGKEINSFNLSDETKMMV 313 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSK---------VEGFYNTISLGVGMKF 205 G T G G++ ++++++ R+EYR S + K ++ N +GV KF Sbjct: 314 GYTLGGGIDF-AMADNVILRVEYRYSDFGKQKFAKDKLELDYKTNDFRVGVAYKF 367 Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 34/123 (27%), Gaps = 25/123 (20%) Query: 7 AVGVSSLALASFCSAQAAD---PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA- 62 V S L + QAAD P ++ + ++G Y G Sbjct: 6 LVSTSIFTLFTASMTQAADIRIPRESRPVVAPVEASSVVSPVIAAPIFSWDGFYLGGQIG 65 Query: 63 --------------LYNGSFGEEAHH------NAGGSIFAGYNVEDSC-IMYGVEGDVRY 101 + + G ++AG NV + GV+ D+ + Sbjct: 66 GFSSKSDRSLYAKQGSSREWAPVGKDALPQLSGFMGGLYAGANVSLGNSFVLGVDTDIAW 125 Query: 102 TVP 104 + Sbjct: 126 SNK 128 >gi|319407469|emb|CBI81119.1| Hemin binding protein d [Bartonella sp. 1-1C] Length = 270 Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 77/276 (27%), Gaps = 87/276 (31%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYNG 66 + S L S AQA D V + P + + + G Y G ++G Sbjct: 4 LTASVFTLFSISIAQATDFV--IPYQSHTDSPFV-----LSSAFSWQGFYFGARIGGFSG 56 Query: 67 SFGEEAHH-------------------NAGGSIFAGYNVEDSCI-MYGVEGDVRYTVPVL 106 G ++AG ++ I + G + +V ++ Sbjct: 57 PITSSIMDENNVERNIIFQDQSSPKLSGVVGGLYAGLDINIHNIFVVGCDTNVDWSGVKD 116 Query: 107 ADNIHS-------------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 I ++R R G+ D ++ Y G Sbjct: 117 TKVIDVIASLQADLKYGNGGGEVDFGIKQSLQQKWLSAIRWRVGFSF-DRVMPYVAGGVS 175 Query: 142 VAQ-----------------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178 ++Q K + +G T G G++ ++++ + Sbjct: 176 LSQFRSTYSKFLVASNNNSSIRSLSEKPLPVSSTSNVNTMVGYTIGGGLDF-AITDNFIL 234 Query: 179 RLEYRASKYSKVEGFYNTIS---------LGVGMKF 205 R EY S + + E + I G+ KF Sbjct: 235 RAEYNYSDFGRKELVNSKIKFSYKSNAFYFGLAYKF 270 >gi|15420172|gb|AAK97308.1|AF308166_1 Pap31 [Bartonella henselae phage 60457] Length = 219 Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 83/223 (37%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH-------------------HNAGGSI 80 +A + G Y G G+F + G I Sbjct: 1 EVAPTVISAPAFSWTGFYIGGQV---GNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGI 57 Query: 81 FAGYNVEDSC-IMYGVEGDVRYTVP----------------------------------- 104 +AG N++ ++ GVE D + Sbjct: 58 YAGSNMDLGNNMILGVETDAVWADREDAKTSSAKVIREDELVNFKDSLKNANAVFAKDKT 117 Query: 105 --------VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGK 150 D++ G+ R+R G+ +D ++ Y G V+ T Sbjct: 118 MDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTKA 177 Query: 151 AG----------EITPIAIGGTAGVGVEVGGLSESLVARLEYR 183 A + T +G T G GV+ ++++++ R EYR Sbjct: 178 ADDAEIASAQLFDKTKTLVGFTLGGGVDF-AMTDNVLLRAEYR 219 >gi|209966188|ref|YP_002299103.1| outer membrane protein [Rhodospirillum centenum SW] gi|209959654|gb|ACJ00291.1| outer membrane protein [Rhodospirillum centenum SW] Length = 231 Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 41/205 (20%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------------SFGEEAHHNAGGSIFAGYNV 86 ++ + F+G Y G + Y + + G++F GY Sbjct: 28 ALSSAPALAQSPFDGGYVGAALGYAWMKPNGTTTFSNATTQKVDRTNDGVTGAVFLGYGK 87 Query: 87 EDSCIMYGVEGDVRYTVPVLADNIHSL-----HGIGGSLRIRGGYEVSDSLLLYATVGPD 141 + G+EG++ + + G + +R G + L+Y +G Sbjct: 88 TIDTLYLGIEGEIGISDQEKNSTLAGNTYNFDAGTSLGIALRAGLLATPDTLVYGRIGWQ 147 Query: 142 VAQKYETGKAG--------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY------ 187 +G+ G + G G GVE L+E+++ARLEY + Y Sbjct: 148 RTDLDVSGRLGSVAGTPTMDENEHLNGWRIGGGVE-HALTENVLARLEYNYTDYESYKVS 206 Query: 188 -------SKVEGFYNTISLGVGMKF 205 + E + + G+ +F Sbjct: 207 YGQGGARTNAEPHESAVRAGIAYRF 231 >gi|118593370|ref|ZP_01550754.1| outer membrane protein, putative [Stappia aggregata IAM 12614] gi|118434048|gb|EAV40705.1| outer membrane protein, putative [Stappia aggregata IAM 12614] Length = 208 Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 17/144 (11%) Query: 77 GGSIFAGYNVEDSCIMYGVEGDVRYTV--PVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134 G + GYN + G+EG+ + N+ + R+R GY D L Sbjct: 67 VGGVHVGYNHMLGQFVLGIEGEANLANFSDTTSANLDVDINWMIAARLRAGYAF-DRFLA 125 Query: 135 YATVGPDVAQ-KYETGKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK--- 189 +AT G ++ +E G + G G GVE G ++E + R EY+ + Sbjct: 126 FATTGVSFSEVTFEIPGTGISDSNTHTGFLFGGGVE-GYVTEHISVRAEYQHHWFGNESY 184 Query: 190 --------VEGFYNTISLGVGMKF 205 +EG + + GV F Sbjct: 185 NVGAGAFDIEGDLDLLRAGVSYHF 208 >gi|12620644|gb|AAG60920.1|AF322013_39 ID525 [Bradyrhizobium japonicum] Length = 781 Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 68/231 (29%), Gaps = 61/231 (26%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------H 74 D + +G P + ++ G Y G + A Sbjct: 554 DTAQAKANGIDKEPPPVMPT-------NWAGVYLGGTIGAGKGRSHYADPFPTPVSGDYA 606 Query: 75 NAGGSIFAG---YNVEDSCIMYGVEGDVRYTVPVLADNIHSLH-------GIG------- 117 + GG++F G N + + G+E Y V N G Sbjct: 607 DLGGAMFGGQIGINYQTGSWVLGLEAS-GYWANVQGTNTCFGAFPSPQIAGFNCGSQIDA 665 Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI-------GGTAGVGVEV 169 G+L R GY D LLY G ++ G I+ + G T G G+E Sbjct: 666 LGALTGRVGYAF-DRTLLYVKGGSAWDRQTNQFNTGGISGTILTNGNTNWGWTVGGGLEY 724 Query: 170 GGLSESLVARLEYRASKYSKV----------------EGFYNTISLGVGMK 204 L + LEY+ + K T+SLGV K Sbjct: 725 -ALLPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYK 774 Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 60/221 (27%), Gaps = 53/221 (23%) Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSAL---------- 63 + A AAD V T P ++ G Y G Sbjct: 27 AGLYGPAHAADLP----------VKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQT 76 Query: 64 ---------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE-----GDVRY--TVPVLA 107 G G G G N + + G+E DV A Sbjct: 77 ATGLQADFSNRGFPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANRA 136 Query: 108 DNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------E 153 DN + + G++ R G + LL+Y G A + Sbjct: 137 DNRYGVISFTCDNRVTSLGTIAGRLGQTWGN-LLIYGKAGAAWATDESDARTSHYINKFN 195 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G G+G+E S +L A +EY + + Y Sbjct: 196 QSGTRWGWMGGLGLEY-AFSPNLSAFVEYDHFDFGSKDSNY 235 >gi|296444784|ref|ZP_06886747.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium OB3b] gi|296257732|gb|EFH04796.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium OB3b] Length = 1115 Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 63/246 (25%), Gaps = 70/246 (28%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + S A + FC A + + + G +AGL+ Y S Sbjct: 24 IVASVAAYSLFCPLGAGSAIAAEPSAAKSAGAASPPM--------WTGFHAGLNGGYGWS 75 Query: 68 F-------------------------------------GEEAHHNAGGSIFAGYNVEDSC 90 A G + GY+ Sbjct: 76 SDTKAQLTVTPLEPPLLYVPPDRVPPSDNFARDATRSIARSASGAFIGGLQLGYDWAFGE 135 Query: 91 -IMYGVEGDVRYTVPVLADNIH----------SLHGIGGSLRIRGGYEVSDSLLLYATVG 139 + GVE D + +V + + G+LR R G + SLL+Y T G Sbjct: 136 RYVVGVEADFQGSVGGHGEATTYSPSTVFVTANQLDYLGTLRGRLGVLATPSLLVYGTAG 195 Query: 140 PD-------------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 A + + +G AG GVE + EY Sbjct: 196 AAYGGPATRTQITQPGAGVFGGYGESQTDRTRLGWAAGAGVE-WMFDPKWSLKAEYLHYD 254 Query: 187 YSKVEG 192 + G Sbjct: 255 LGSIGG 260 Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 48/150 (32%), Gaps = 33/150 (22%) Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA------------------DNIHSLHG 115 GG G ++ + G+E D+R + Sbjct: 926 GFVGGFQIGGNQKLNARFVAGLEADLRGSFGNSGSRSQFGTSTSIGNTFLSFGQTTVRLN 985 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT--------------PIAIGG 161 G++R R GY V+ + LYAT G A + + +G Sbjct: 986 YLGTIRPRLGYLVTPDVQLYATGGLAFAGLTSSAEMVTDRVGGITTTVGDPLYQDTRLGW 1045 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVE 191 TAG GVE L+ + A+ EY ++ Sbjct: 1046 TAGGGVE-WALAPNWTAKAEYLHYDLGQIR 1074 >gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099] gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099] Length = 205 Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 71/219 (32%), Gaps = 33/219 (15%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 ++ + V + LA A AAD + P ++G Y G+ Sbjct: 4 RVKIVVTAAGLAFCLLGPAMAADL---------------SPTYNDPPAFQWSGAYVGVHG 48 Query: 63 LYNGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--NIHSLHGIG 117 + + G + AGYN + + G E + Y D Sbjct: 49 GTAFTGMPNPFAGRNGFSGGVQAGYNQQMGPTVLGAEIEGSYLGGAEHDVQGGKIKEKWR 108 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 G+ + + G D LL+ T G + + + +G G G+E G + L Sbjct: 109 GAAKAKAGLSF-DQTLLFGTGGVALTKFDKGDNVSSADGWKVGYLLGAGIE-QGFAGGLS 166 Query: 178 ARLEYRASK-----------YSKVEGFYNTISLGVGMKF 205 A++EY + SK + + G+ +F Sbjct: 167 AKVEYDYVRTLGVETTSALGTSKTTIGSHELKAGINYRF 205 >gi|323138252|ref|ZP_08073324.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] gi|322396504|gb|EFX99033.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] Length = 255 Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 71/215 (33%), Gaps = 40/215 (18%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + SLA+ + SA AAD R P + G YAG++ Sbjct: 3 KTLLTAVSLAVLAAGSAFAADLPSRKE--------APVYVPPPPPPPMWTGFYAGVNIGG 54 Query: 65 NGSFGEEAHH-----NAGGSI------------FAGYNVE-DSCIMYGVEGDVRYTVPVL 106 G + A G + GYN + + GVE D + T Sbjct: 55 GWDAGNGNGNAWNLFGANGGVTNNMSGGVVGGGQVGYNYQITPMFLVGVETDFQGTSMGS 114 Query: 107 ADNIH------------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154 N + + G++R R G ++ +LL+Y T G A G Sbjct: 115 GMNNNNWLWGWNGRAQGTSLDWFGTVRGRAGVTITPTLLVYGTGGFAYAGVQRNGGFQT- 173 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + G TAG GVE + A+ EY + S Sbjct: 174 SATQTGWTAGGGVE-WMFMPNWSAKAEYLYTDVSG 207 >gi|192289353|ref|YP_001989958.1| porin [Rhodopseudomonas palustris TIE-1] gi|192283102|gb|ACE99482.1| porin [Rhodopseudomonas palustris TIE-1] Length = 243 Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 69/210 (32%), Gaps = 47/210 (22%) Query: 39 PTIATNRYVP-IRHDFNGPYAGLSALYNGSFGEEAHHNAG----------GSIFAGYNVE 87 P Y P +++ G Y G G+F + G G + AGY+ + Sbjct: 28 PYTKAPAYAPAPVYNWTGFYIGGHIG--GAFSGDNSIGTGVTASDNGKFLGGVQAGYDWQ 85 Query: 88 D-SCIMYGVEGDVRY-----TVPVLADNIHSLHGIG---------GSLRIRGGYEVSDSL 132 + GVEG + ++ G+ S+ R GY Sbjct: 86 FAPNWVLGVEGQYSWLSGTNQSVAFGGTLNGAPGVFTYADNQRGLASVTGRLGYTW-GPA 144 Query: 133 LLYATVGPDVAQKYET----GKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYR 183 LLY G A + AG +AI G T G G+E + + ++EY+ Sbjct: 145 LLYVKGGWAYADYSSSLTFVPNAGGFAAVAIDSKKDGYTVGGGLEYL-FAPNWSGKIEYQ 203 Query: 184 ASKYSKVE--------GFYNTISLGVGMKF 205 + V+ + + G+ +F Sbjct: 204 YYDFGNVDLGNGFSAKNDEHVVKAGLNYRF 233 >gi|146337818|ref|YP_001202866.1| putative outer membrane protein A-like (OmpA-like) [Bradyrhizobium sp. ORS278] gi|146190624|emb|CAL74626.1| Conserved hypothetical protein; putative outer membrane Protein A-like (OmpA-like) [Bradyrhizobium sp. ORS278] Length = 673 Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 66/202 (32%), Gaps = 39/202 (19%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIR-------HDFNGPYAGLSALYNGSFGEEA----- 72 V G G + T +P++ D+ G Y G A Y Sbjct: 19 MLVAGTMLAGLGPLATSVAAADLPVKARMAQTVFDWTGLYVGAHAGYTRDHASATLSDPT 78 Query: 73 --------HHNAGGSIFAGYNV-EDSCIMYGVEGDVRYTVPVLAD-----------NIHS 112 + G + AGYN S ++ G+EGD + + ++ ++ Sbjct: 79 GVASAGSRFNGLTGGVQAGYNWVTRSGLLLGLEGDFSFPNYLTSNHTVAMLGTPGASVSE 138 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGTAGVGV 167 L + R R GY + L YAT G + T AG +G AG G+ Sbjct: 139 LWDYVATARGRVGYA-NGDWLAYATGGVAWTGGRFINTDPAGNTEKRLTTRLGWVAGAGI 197 Query: 168 EVGGLSESLVARLEYRASKYSK 189 E + RLEY + Sbjct: 198 E-RAFAPDWSWRLEYLYYGFEN 218 >gi|75677026|ref|YP_319447.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi Nb-255] gi|74421896|gb|ABA06095.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi Nb-255] Length = 652 Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 47/204 (23%), Gaps = 43/204 (21%) Query: 31 HHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-----------GSFGEEAHHNAGGS 79 G +++ G Y G S G+ G Sbjct: 410 PDQVAGAPLFAKAPAMGVAPYNWTGFYIGASTGVLNGRTDWSFPGFGTGANPRFAGFAGG 469 Query: 80 IFAGYNVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDS 131 GY+ + + G+EG + A + + G+ + GY + Sbjct: 470 GQIGYDWQTGPWVVGIEGAFNASNANGARSCPNALFYTCRNEIDWLGTATAKLGYALWSR 529 Query: 132 LLLYATVGPDVAQKYETGK-----------------------AGEITPIAIGGTAGVGVE 168 L+Y G + A+G T G G E Sbjct: 530 SLVYLRGGAAFGNTRIVSTCNTGPNGQYIDYSIPALITQPGCGASSSRTAVGWTIGYGAE 589 Query: 169 VGGLSESLVARLEYRASKYSKVEG 192 LS + R E Sbjct: 590 F-ALSRNWTVRAESNYFDLGTERH 612 >gi|323136029|ref|ZP_08071112.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC 49242] gi|322399120|gb|EFY01639.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC 49242] Length = 582 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 71/253 (28%), Gaps = 74/253 (29%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 + + +L A FC+ P A P P + G Y G + Sbjct: 5 KSVTRRFAACALTFAGFCA-----PASGADLPSFKGAPVAP-----PPVFTWTGLYVGFN 54 Query: 62 ALYNGSFGEEAHHNA---------------------------GGSIF---AGYNVE-DSC 90 + + + + GG F AGYN + Sbjct: 55 FGHTWTASDPVSIGSVNPFDLSGAGFGPASALGATGAVDARLGGYFFGGQAGYNWQFSEK 114 Query: 91 IMYGVEGDVRYTVPVLADNIHS-----------------LHGIGGSLRIRGGYEVSDSLL 133 ++ G E D++ ++ S G++R R GY V+ + + Sbjct: 115 LIAGFEADIQGAGVRGGGHLASILPAPAGFAVSGVKLSRGLEYFGTVRGRFGYAVTPTFM 174 Query: 134 LYATVGPDVAQ---------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178 Y T G + +G T G G EV LS ++ A Sbjct: 175 AYVTGGLAYGGVTADSAIRQSLTPSLLLAEPGKLDYFDNRVGWTVGAGGEV-ALSRNISA 233 Query: 179 RLEYRASKYSKVE 191 +LEY V Sbjct: 234 KLEYLYYDLGGVT 246 >gi|319898376|ref|YP_004158469.1| Hemin binding protein E [Bartonella clarridgeiae 73] gi|319402340|emb|CBI75879.1| Hemin binding protein E [Bartonella clarridgeiae 73] Length = 299 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 19/110 (17%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE--------TGKAGEITPIAIGGTAG 164 G+ R+R G+ +D ++ Y G + + + + IG T G Sbjct: 192 KEKWTGATRVRIGFA-ADRIMPYVAGGISYVELQDTLSVVIGTEENKADESKTMIGYTFG 250 Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 GV+ L+ S++ R EYR S + K N +GV KF Sbjct: 251 GGVDF-ALTNSIIVRTEYRYSDFGKKKFAKEEVDLSYKTNNFRVGVAYKF 299 >gi|90424253|ref|YP_532623.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18] gi|90106267|gb|ABD88304.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18] Length = 247 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 67/212 (31%), Gaps = 40/212 (18%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K L V +AL A AAD R + YV +D++G Y G Sbjct: 1 MKKFLLGT-VGVVALGLAAPAVAADLPARTYTK---------APAYVAAVYDWSGFYIGA 50 Query: 61 SALYNGSF------------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY------- 101 +A + S G A GY + ++G+E + Sbjct: 51 NAGWGNSRDSRFDETFGLDLGAHDADGAVAGGQIGYRWQTGTWVFGLEAQGDWADLSGNH 110 Query: 102 -TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT----- 155 V + + S G + GY ++ LLY G V + Sbjct: 111 LNPLVFDNRLSSKTDAFGLFTGQIGYAW-NNALLYVKGGAAVTDRKYDFTVDSTGAPISS 169 Query: 156 ---PIAIGGTAGVGVEVGGLSESLVARLEYRA 184 GT GVG+E G + + +EY Sbjct: 170 TGYKTRWSGTVGVGLEY-GFAPNWSFGVEYDH 200 >gi|27376315|ref|NP_767844.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27349455|dbj|BAC46469.1| outer-membrane immunogenic protein precursor [Bradyrhizobium japonicum USDA 110] Length = 241 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 61/208 (29%), Gaps = 38/208 (18%) Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSAL--------YNG-SFGEEAHHNAGGSIFAGY 84 G YV +++ G Y G +NG S G + G + G Sbjct: 26 GNRNYYKAPAPAYVAPIYNWTGFYLGAHVGGAFSSDNNFNGLSTGNNGNGRFLGGVQVGA 85 Query: 85 NVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYAT 137 + + + + GVEG + + GS+ R GY LLY Sbjct: 86 DWQFNPNFVVGVEGQYSWLSGSVGAVFPGGVAYTNDQRGLGSITGRVGYTW-GPGLLYVK 144 Query: 138 VGPDVAQKYETGKAGE-------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 G + E G G T G G+E + + A+ EY+ + Sbjct: 145 GGYAYSDNNEKVTVGGVPTGFIIDGDHRNGYTVGAGLEY-MFAPNWSAKAEYQYYNFGDA 203 Query: 191 -------------EGFYNTISLGVGMKF 205 +T GV +F Sbjct: 204 HFTAGPLAGTGNFTTDDHTFKAGVNYRF 231 >gi|254503257|ref|ZP_05115408.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii DFL-11] gi|222439328|gb|EEE46007.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii DFL-11] Length = 184 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 17/162 (10%) Query: 47 VPIRHDFNGPYAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97 P + GPY G A + G + + +A +F GYN E S ++ GVEG Sbjct: 2 APAGSIWAGPYLGFEAGGSQTVTEVKAGGQKKDYSRFDAAFGVFGGYNWEVSRVILGVEG 61 Query: 98 DVRYTVPVLADN------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151 Y I + + + R G + ++ + Y ++G Sbjct: 62 AATYIGDTKKGQHPVLGTIETGSKWSVTAKTRVGLPI-NNFMPYVSLGVAATDHSLKANG 120 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + + +G G GVEV + ++ R +Y + + + Sbjct: 121 RTESSVGLGAVLGAGVEV-AMHDNWRLRADYTLTGIADTKDT 161 >gi|319898546|ref|YP_004158639.1| Hemin binding protein B [Bartonella clarridgeiae 73] gi|319402510|emb|CBI76053.1| putative Hemin binding protein B [Bartonella clarridgeiae 73] Length = 609 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 24/115 (20%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPD-----VAQKYETGKAGEIT---------PIA 158 G+ RIR G + + Y G + G+ Sbjct: 497 KQKWSGATRIRLGLA-AGRFMPYIAGGVAYTKIQGTFSKLIKEIGKENTSSNLFDSVETM 555 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGMKF 205 IG T G + +++ ++ R EYR S + + + N + +G+ KF Sbjct: 556 IGYTLSGGFDF-AMTDRVLIRSEYRYSDFGEKKFKKINSKYYKINDVRIGLAYKF 609 Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 34/131 (25%), Gaps = 33/131 (25%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-ALYN 65 V +S + Q AD + V + + G Y G ++ Sbjct: 6 LVTISVFSFILASRVQGADIINHQDSRSI-----------VAPVYSWKGFYLGGQIGGFS 54 Query: 66 GSFGEEAHH-------------------NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPV 105 G H G +AG N + + GV+ D+ ++ Sbjct: 55 GLTTFNYHKYDNIEKWNSIDEDLSSEIFGFTGGFYAGSNFDFGNGFILGVDTDIVFS-NK 113 Query: 106 LADNIHSLHGI 116 + + Sbjct: 114 KDTKVFVKNKF 124 >gi|91977226|ref|YP_569885.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] gi|91683682|gb|ABE39984.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] Length = 241 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 56/184 (30%), Gaps = 31/184 (16%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG--------------SIFAGY 84 P + +D++G Y G + + S + GG GY Sbjct: 28 PYAKAPPIIAAVYDWSGFYIGANGGWGTSRKSWDFYTVGGLAAEGSHDASGATAGGQIGY 87 Query: 85 NVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYA 136 N + ++G+E + ++ + S G R GY ++ LLYA Sbjct: 88 NWQAGSWVFGLEAQGNWADFKGSNVTLLGGLFDNQSRIDAFGLFTGRVGYAW-NNALLYA 146 Query: 137 TVGPDVAQKY-------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G V + G + G G G E G + + +EY K Sbjct: 147 KGGAAVVNDKYDFIRRADGFVTGTASETRWGAAVGAGFEY-GFTPNWSFAVEYDHLFLDK 205 Query: 190 VEGF 193 + Sbjct: 206 KDVT 209 >gi|260426559|ref|ZP_05780538.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260421051|gb|EEX14302.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 199 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 18/204 (8%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY----NG 66 S + L + A + V P P+ D+ GP G Y Sbjct: 5 SLILLPFLATPALAGSLEPTPVEPAPVAPLAPVAS--PVTGDWTGPSVGAQLGYGSVDTD 62 Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126 G+++ + A Y+ + + G V+Y + + R GY Sbjct: 63 GAGDDSEDGMVYGLRAFYDHDFGNWVAG--AGVQYDATDIDLGDAGDLDGIARVGGRVGY 120 Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 ++ ++Y T G A T + G G GVE +S+++ E ++ Sbjct: 121 DL-GRTMVYGTGGYAHA---TTDGGSLDAGSSGGYYVGAGVET-FVSDNVTLNGEVNYNE 175 Query: 187 YSKVEGFYNTI-----SLGVGMKF 205 +S + + ++G+ +F Sbjct: 176 FSDFDDDDLEVGATTATVGINYRF 199 >gi|296444331|ref|ZP_06886296.1| porin [Methylosinus trichosporium OB3b] gi|296257978|gb|EFH05040.1| porin [Methylosinus trichosporium OB3b] Length = 277 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 44/181 (24%) Query: 48 PIRHDFNGPYAGLSALYNG----------------SFGEEAHHNAGGSIFAGYNVE-DSC 90 P + GPY GL+ + + ++ G + GYN + Sbjct: 36 PPVFSWTGPYVGLNLGGSWITRNNDWNNWGGWGWNNNNSGSNGGVSGGLQIGYNYQLSPM 95 Query: 91 IMYGVEGD--------------------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130 + G+E D V ++ +N G++R R G + D Sbjct: 96 FVVGLETDFQGTSIGGGNNNNNWWGYGGVGWSNWWNNNNNE-RVPWFGTVRGRLGVALLD 154 Query: 131 -SLLLYATVGPDVAQKYETGK----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 LL+Y T G + G + G TAG G+E L + A++EY + Sbjct: 155 SRLLIYGTGGFGYGEVNRNDLFSWWGGNNGQLRTGWTAGGGIEWAFL-PNWSAKIEYLYT 213 Query: 186 K 186 + Sbjct: 214 E 214 >gi|146341076|ref|YP_001206124.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] gi|146193882|emb|CAL77899.1| putative outer-membrane protein precursor [Bradyrhizobium sp. ORS278] Length = 237 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 35/206 (16%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG--LS 61 + + +++ + AAD R T A + +D++G Y G Sbjct: 1 MKKLLLMTTALVVLASPTLAADLAAR--------PYTKAPAPMMAAIYDWSGFYIGANGG 52 Query: 62 ALYNGSFGE-------EAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ + + +H ++GG+I GY + +++GVE + + Sbjct: 53 GGWSHNTWDLVGGGREGSHDSSGGTIGGQFGYRWQMGPVVFGVEAQGNWADFTGDNVSAL 112 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIA 158 A + G + GY +++LLYA G + T Sbjct: 113 FATRNRTKTDAFGLFTGQVGYAF-NNVLLYAKGGAAVTSNKYTITNAVTGAFLASNTDSR 171 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA 184 GG G G+E G + + +EY Sbjct: 172 WGGVVGAGLEY-GFAPNWSVGVEYDH 196 >gi|240850342|ref|YP_002971735.1| hemin binding protein E [Bartonella grahamii as4aup] gi|240267465|gb|ACS51053.1| hemin binding protein E [Bartonella grahamii as4aup] Length = 330 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 21/112 (18%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-----------GKAGEITPIAIGG 161 G+ R+R G+ + ++ Y G Q + + + T IG Sbjct: 221 KQKWTGATRVRVGFS-AGRVMPYIAGGVAYGQFQDILSTVITGGEPFNRTSDATKTMIGY 279 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------NTISLGVGMKF 205 T G GV+ +++ LV R EYR S + K + N G+ KF Sbjct: 280 TLGGGVDF-AMTDHLVVRAEYRYSDFGKKKFKDEIEVKYKTNDFRAGIAYKF 330 >gi|323137480|ref|ZP_08072557.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242] gi|322397106|gb|EFX99630.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242] Length = 722 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 65/216 (30%), Gaps = 67/216 (31%) Query: 48 PIRHDFNGPYAGLSALYNG-------------------SFGEEAHHNAGG-------SIF 81 P + G YAG + + FG + +A G +F Sbjct: 41 PSVFTWTGLYAGANFGHAWASKNAIGLRSTNLVDLTTIGFGPASALSASGVADARLNGLF 100 Query: 82 AG----YNVEDS-CIMYGVEGDVRYT--------------------VPVLADNIHSLHGI 116 AG YN + + + GVE D++ V + ++ Sbjct: 101 AGGQVGYNWQFAKQFVVGVEADIQGASVDGGGGLANVAAARLAPPAWAVTSASLRRNLEY 160 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKY---------------ETGKAGEITPIAIGG 161 +LR R GY + +LLLYAT G + + GE +G Sbjct: 161 IATLRGRFGYAATPTLLLYATGGIAHGRARAGIELEQSLTSSDFDDAEVEGEHYGNLMGF 220 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197 G G+E + +LEY + I Sbjct: 221 VIGGGLEA-AFGRHVSGKLEYLYYDLGTLRLGTPRI 255 >gi|115524895|ref|YP_781806.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53] gi|115518842|gb|ABJ06826.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53] Length = 247 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 69/214 (32%), Gaps = 42/214 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ L V +AL A AAD P + + +D++G Y G Sbjct: 1 MKRILLG-SVGLIALGMAAPAFAADL----PARTYTKAPPM-----IAAIYDWSGFYIGA 50 Query: 61 SALYN---------------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105 + + GS G A GY + ++G+E + Sbjct: 51 NGGWGSSRSSWDYLGPGLAVGSEGSHDADGAVAGGQIGYRWQAGTWVFGLEAQGNWADLS 110 Query: 106 LA--------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA------ 151 + D I + G + GY ++ LLY G V Sbjct: 111 GSNISSLFITDTIRTKVDAFGLFTGQFGYAW-NNALLYVKGGAGVVSSKYDAFTTATGAA 169 Query: 152 -GEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 G GGTAGVG+E G + + +EY Sbjct: 170 LGSANSTRWGGTAGVGLEY-GFAPNWSVAVEYDH 202 >gi|209886119|ref|YP_002289976.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5] gi|209874315|gb|ACI94111.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5] Length = 237 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 27/148 (18%) Query: 84 YNVED--SCIMYGVEG-------DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134 YN + S ++G+E D+ + P + GS+ R GY V+D LL+ Sbjct: 90 YNWQGFGSPFVFGLEAEIAGSGIDLSFVDPADGSGASYKLNMFGSVTGRVGYAVNDMLLI 149 Query: 135 YATVGPDVAQKYETGKAGEI----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 YA G A+ + G + G T G G+E ++ + + EY + Y K Sbjct: 150 YAKGGYAWARTKLSVVDGADSFSSSATHSGYTIGAGLEY-MMARNWSTKAEYLYADYGKA 208 Query: 191 E-------------GFYNTISLGVGMKF 205 +T+ G+ F Sbjct: 209 TYGPAPDGDTGRIGLSNHTVKFGINYHF 236 >gi|86749319|ref|YP_485815.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86572347|gb|ABD06904.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 237 Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 9 GVSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 +S++AL + A AAD P + +++ G Y G + + Sbjct: 5 LLSAVALGALGAPAFAADL---GPRPAYTKAPPATAPT---VVYNWTGFYIGGNVGGAFA 58 Query: 68 FGEEAHHNAG---GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------ 117 ++G G + G++ + + G+E + I Sbjct: 59 GSNNLQSDSGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVIFPAGSTATENTRG 118 Query: 118 -GSLRIRGGYEVSDSLLLYATVGPDVAQKYE-------TGKAGEITPIAI-GGTAGVGVE 168 GS+ R GY LLYA G A + G T G G+E Sbjct: 119 LGSVTGRIGYTW-GPALLYAKGGYAFRDSSLGVATAGGIPAAYSTSGSRNDGYTVGAGLE 177 Query: 169 VGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGMKF 205 + S A++EY+ K+ +T+ G+ +F Sbjct: 178 Y-MFAPSWSAKVEYQYYKFDNTAFTSGPADMVGTTFRNDDHTVKAGINYRF 227 >gi|75674527|ref|YP_316948.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255] gi|74419397|gb|ABA03596.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255] Length = 674 Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 71/206 (34%), Gaps = 43/206 (20%) Query: 29 RAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF------------GEEAHHNA 76 + P + R + D++G Y G A + G G Sbjct: 35 QNGFAQAADFPAVRKARPLTAI-DWSGFYVGGHAGFGGGRSAATLFDPAPAAGRNVFGGL 93 Query: 77 GGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLAD-----------NIHSLHGIGGSLRIRG 124 G I AGYNV ++ G+E DV + + ++ +I G+ R R Sbjct: 94 IGGIQAGYNVRLPSGLLLGLEADVSFPSYIESNSFVSGLATARSDITHQWDFIGTARARF 153 Query: 125 GYEVSDSLLLYATVGPD-VAQKYETG-KAGEITP---IAIGGTAGVGVEVGGLSESLVAR 179 GY + L YAT G +Y +G+ G AG G+E + AR Sbjct: 154 GYA-AGPWLAYATGGLAFAGDRYLNDLPSGDQEKMLDARFGWVAGAGLEY-AFAPYWSAR 211 Query: 180 LEYRASKYSKVEGFYNTISLGVGMKF 205 LEY ++ G G++F Sbjct: 212 LEYLHYQFE-----------GTGVQF 226 >gi|86749064|ref|YP_485560.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86572092|gb|ABD06649.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 254 Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 58/216 (26%), Gaps = 54/216 (25%) Query: 16 ASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL--SALY--------- 64 A AAD +A P+ + G Y G + Sbjct: 17 LGSSMALAADMAMKAPVKAVPYAPSP----------SWTGLYVGGHLGGGWVDETATFVS 66 Query: 65 ---------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD------- 108 G+ H G + AGYN + + G+ GD +T + Sbjct: 67 STSINLIDPLGTSYPIDHSGFLGGVQAGYNYQIQNWVIGIAGDFSWTSAKVDTVTASLLV 126 Query: 109 -----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG----------E 153 + + + R GY + LL Y G G A + Sbjct: 127 PGAQVHTQAKTDWYATATGRVGYAFGN-LLAYGKGGAAWIHSVHGGFADFGAAGIVPFSD 185 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 +T G T GVG+E + EY + Sbjct: 186 VTTTRAGWTVGVGLE-WAFAPHWSVFGEYNYMDFGT 220 >gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 205 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 72/217 (33%), Gaps = 33/217 (15%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + + S+LA+ A AAD + P ++G Y G+ Sbjct: 6 KIILTASALAMCLLGPAMAADL---------------SPAYNDPPAFQWSGAYVGVHGGT 50 Query: 65 NGSFGEE---AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--NIHSLHGIGGS 119 + + G AGYN + + G E + Y D G+ Sbjct: 51 AFTGMPNPFAGRNGLSGGFQAGYNQQMGPAVLGAEIEGSYLGGAEHDVRGGKIKEKWRGA 110 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 + + G D LL+ T G + + + K I +G G G+E G + L A+ Sbjct: 111 AKAKAGLSF-DQTLLFGTGGVAMTKFDKGDKVNGIDGWKLGYLVGGGIE-QGFAGGLSAK 168 Query: 180 LEYRASKYSKVEGF-----------YNTISLGVGMKF 205 +EY + VE + + G+ +F Sbjct: 169 VEYDYVRTPGVETTSALGKSKATIGSHELKAGINYRF 205 >gi|86749266|ref|YP_485762.1| outer membrane protein [Rhodopseudomonas palustris HaA2] gi|86572294|gb|ABD06851.1| outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 274 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 77/242 (31%), Gaps = 50/242 (20%) Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG------------ 59 +L F +A A + A P V +NG Y G Sbjct: 25 ALKTFLFGTAAALVMMSSASAADLAARPYTKAAPIVAPVLTWNGFYIGGQGGYGWGSSDE 84 Query: 60 ---LSALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTV----------- 103 +A FG + + +GG GYN + +++G+EGD + Sbjct: 85 TVFAAANTPAFFGSQKYDTSGGFAGGVVGYNWQSGAVVFGLEGDYHWADINGTSSVINVG 144 Query: 104 -PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-----ITPI 157 P L D + G ++ R GY + L + + G V G Sbjct: 145 PPNLGDTYSTKLRGFGDIKGRLGYA-AGPALWFVSGGAAVGDLQHRYDGGAANTFVQNKT 203 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV--------------EGFYNTISLGVGM 203 G T G GVE + S A+LEY + + ++T+ +G+ Sbjct: 204 KWGYTVGAGVEY-MFAPSWSAKLEYNYIDLGRSTIQYTAAPTNRSEWKDTFHTVKVGINY 262 Query: 204 KF 205 F Sbjct: 263 HF 264 >gi|312115943|ref|YP_004013539.1| porin [Rhodomicrobium vannielii ATCC 17100] gi|311221072|gb|ADP72440.1| porin [Rhodomicrobium vannielii ATCC 17100] Length = 291 Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 76/280 (27%), Gaps = 87/280 (31%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V S+LA F +A GG G P + G Y G + Sbjct: 6 VRASALAAGVFAIIGSASAADIYGGGGYGGYKDAPIIVAAPA---WTGFYVGGHLGAAWT 62 Query: 68 FGEEAHH------------------------------NAGGSIFAGYNVEDS-CIMYGVE 96 E + A G GYN + + G+E Sbjct: 63 NLETRRNTYWDRDPLPTGVAAAPYDYSTFGGNGLGTTGAFGGGQFGYNWQTGGNFVLGIE 122 Query: 97 GDVR--------------YTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135 DV Y P L N+ S GI G + R GY ++ LLY Sbjct: 123 VDVGGLQGDNERTFAAATYDGPALDAIDHIAVVNVKSQGGIYGDVTGRLGYAWGNT-LLY 181 Query: 136 ATVGPD--VAQKYETGKAGEITP-----------IAIGGTAGVGVEVGGLSESLVARLEY 182 G +I G TAG G+E + + ++EY Sbjct: 182 LKGGFAWLATDLKVRAAITDIDGETDYYNRSFDNTLTGWTAGGGLEYQ-FNPNWTMKVEY 240 Query: 183 RASKYS-----------------KVEGFYNTISLGVGMKF 205 +S K + +T+ LG +F Sbjct: 241 LHFDFSLDDNNWRWDEGNNWKIFKNDVTADTVKLGFNYRF 280 >gi|296445833|ref|ZP_06887785.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] gi|296256661|gb|EFH03736.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] Length = 277 Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 76/238 (31%), Gaps = 56/238 (23%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A + +LA SA AAD R A P + G Y GL Sbjct: 1 MKKYVVAASMLALAF-GMGSASAADLPSRKD--------APAFLPPPPPPPMWTGFYVGL 51 Query: 61 SALYNGSFGEE----------------------------AHHNAGGSIFAGYNVED-SCI 91 +A Y + ++ G GYN + + Sbjct: 52 NAGYGWTNNNTVTQSYADTGSAGFGAQALGGNFPWNASVSNDGFIGGGQIGYNAQVYNSF 111 Query: 92 MYGVEGD----------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 + G+E D Y P + +I G++R R GY V+ +LL YAT G Sbjct: 112 VVGLEADMQGVASDRQAASYYGPTASASISRSLDYLGTVRGRVGYLVTPTLLAYATGGLA 171 Query: 142 VAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 Q +G + + +G + G G E + A+ EY Sbjct: 172 YGQANLSGAYYGTATGSDSFSDTRVGYSVGGGFEWLFM-PHWSAKAEYLYYDLGNATT 228 >gi|316932990|ref|YP_004107972.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1] gi|315600704|gb|ADU43239.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1] Length = 696 Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 75/239 (31%), Gaps = 68/239 (28%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG 78 A AAD VR A R D++G Y G + AGG Sbjct: 44 APAAAADLVRTAPLAPR-------------AVFDWSGFYIGAHFSAVAGHSNWSSAPAGG 90 Query: 79 ---------------------SIFAGYNVEDSC-IMYGVEGDVR-------YTVPVLADN 109 + AGYN + GVE D+ T L Sbjct: 91 SGSIDLFDAFQLFKGTGSYVVGLQAGYNWMLPSRWLIGVEADLNSPNTLGGNTGNTLPSG 150 Query: 110 IHSLHG----IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIA---- 158 H +GG++R R GY + L Y T G + A A Sbjct: 151 TVGGHDHQALLGGTVRGRLGYALGG-WLPYVTAGFAWSYDRLRWPPDPALAQQETALLWR 209 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSK-------------VEGFYNTISLGVGMK 204 +G +AG G+++ LS + AR EY A+ + + + + LG+ + Sbjct: 210 LGWSAGAGIDLP-LSPAWSARAEYLATGFGNGTVSFPIAGERVTSDVLTHAVRLGLNYR 267 >gi|134095715|ref|YP_001100790.1| hypothetical protein HEAR2547 [Herminiimonas arsenicoxydans] gi|133739618|emb|CAL62669.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 278 Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 70/190 (36%), Gaps = 49/190 (25%) Query: 55 GPYAGLSALYNGS-------FGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPV 105 G +AG+ +G+ G A + GG GYN I G+E D+++T Sbjct: 60 GYFAGVGGDASGAIAQASSLTGRYASSHKGGAVGAHLGYNWPSGKIFLGLESDIQFTDLK 119 Query: 106 LADNIHSLHGIGG--------------------SLRIRGGYEVSDSLLLYATVGPDVAQ- 144 +++++ + G +LR R GY V+D LLY T G V + Sbjct: 120 DNAALNTINPVTGYPGNPMSANVRQVNTVDYLVTLRGRIGY-VNDQWLLYGTGGVAVGRV 178 Query: 145 ----------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 ++ AG + +G G G E ++++ R+EY Sbjct: 179 NTNINYKGSYLSAPTIVFDDLNAGSRS-TRLGFVLGAGAEY-AIAKNWAVRVEYLYYDLG 236 Query: 189 KVEGFYNTIS 198 K YN S Sbjct: 237 KSSQSYNVTS 246 >gi|85715276|ref|ZP_01046259.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A] gi|85697922|gb|EAQ35796.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A] Length = 283 Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 87/289 (30%), Gaps = 97/289 (33%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L LA + A A AAD ++T R V + G Y G Sbjct: 8 MRRLLLAAVICGAA----QGAYAADMPDDLPFLRGSQPAGLSTVRTV-----WQGFYIGG 58 Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88 A Y + G ++ ++G F GYNV+ Sbjct: 59 QASYGSADMDFKNSGKDLLERLLNNLDVEGQYHLSTWPLGGTSSNRSSGFGGFLGYNVQM 118 Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIG------------------------GSLRIRG 124 ++GVE YT G GSLR+RG Sbjct: 119 EDAVFGVEA--NYTHGKFFGASSGSQGRSFNYPTNYLTSAFVQSNASMQITDFGSLRVRG 176 Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAG---------------------------EITPI 157 GY L YA G + + A Sbjct: 177 GYSF-GCFLPYAFAGVAMGRADIRRNASYSLYYQYIGTQIPPLPDLSGSSSLSDNANAHF 235 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205 G AG+G+++ +SL R E+ +++ V+ NT+ GVG +F Sbjct: 236 IYGYAAGLGIDMMIF-DSLFLRAEWEFLRFTAPVDTIVNTVRAGVGYRF 283 >gi|312115598|ref|YP_004013194.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC 17100] gi|311220727|gb|ADP72095.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC 17100] Length = 249 Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 74/213 (34%), Gaps = 36/213 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K F+A ++ A SA A D ++ + +V T + G Y GL Sbjct: 1 MKKTFVAAASAAAIFAMSGSALAGDLYAKSGYKDAPIVVAEPT---------WTGFYIGL 51 Query: 61 SAL-------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV------ 95 + G + G++ GY+ + I+ GV Sbjct: 52 GVGGQAVNHELSASDFDAGDEEWIGDLNGVSGTGVIGTVEVGYDRQFGNIVAGVFFNYDF 111 Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET-GKAGEI 154 DV ++ + N+++ + R GY V+ L Y G + G Sbjct: 112 GDDVSSSLRIEDLNVNAKQTDSWTAGGRLGYLVNPGTLAYVLGGYTQSTFELGFPGFGSA 171 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 G T G G+E LS + + EYR +++ Sbjct: 172 DDTFAGWTVGGGLETR-LSGNWYLKGEYRFTEF 203 >gi|296447741|ref|ZP_06889657.1| OmpA domain protein transmembrane region-containing protein [Methylosinus trichosporium OB3b] gi|296254773|gb|EFH01884.1| OmpA domain protein transmembrane region-containing protein [Methylosinus trichosporium OB3b] Length = 248 Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 54/160 (33%), Gaps = 27/160 (16%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHN--------AGGSIFAGYNVE-DSCIMYGVEGDVRY 101 + G Y G A G + G GYN ++ G+E D Y Sbjct: 41 FSWRGFYLGGFAGALLGDGTFTYFEQTPMRGAALVGGGTIGYNWMWTPTLLVGIEADFGY 100 Query: 102 TVPVLADNIH------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-- 153 V ++ ++ + G+ G+ R R GY + L YAT G + Sbjct: 101 RGQVYSERVNRVYPGPTDGGVLGTARARLGYAFAPRWLSYATAGFAYGTDFPPRGFTSTM 160 Query: 154 ---------ITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 T + G TAG GVE S+ + + EY Sbjct: 161 PLTFGVQNTGTTVRAGWTAGAGVEY-AWSDLISVKAEYLY 199 >gi|217979538|ref|YP_002363685.1| putative outer-membrane immunogenic protein precursor [Methylocella silvestris BL2] gi|217504914|gb|ACK52323.1| putative outer-membrane immunogenic protein precursor [Methylocella silvestris BL2] Length = 200 Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 22/145 (15%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-----------SIFAGYNVE 87 P A P + G YAG++ G E A ++ G GYN + Sbjct: 35 PKEAPLYTPPPEFSWTGFYAGVNIG-GGLSAENAFNSFSGINASRAGGVVGGGQVGYNYQ 93 Query: 88 -DSCIMYGVEGDVRYTVPVLADNI----HSLHGIGGSLRIRGGYEVSDS-LLLYATVGPD 141 + G+E + + ++N H G+ R R G+ V D LL+Y T G Sbjct: 94 LTPLFVVGIENEFLGSSISTSNNDWNRPHVTVPFFGTARGRAGFTVFDPHLLVYGTGGLA 153 Query: 142 VAQKYETGKAGEITPIAIGGTAGVG 166 Q + G I + IG TAG G Sbjct: 154 FGQVNDAG----INKLRIGWTAGSG 174 >gi|91978029|ref|YP_570688.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris BisB5] gi|91684485|gb|ABE40787.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris BisB5] Length = 724 Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 78/230 (33%), Gaps = 55/230 (23%) Query: 27 VRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE---------------E 71 V G G+V P D+NG Y G Y + + Sbjct: 69 VVTTPAAGGGIVVKAPAAG-GPAVFDWNGFYIGGHFSYVAGRSDWTAQPAGVSGTIDLFD 127 Query: 72 AHHNAGG------SIFAGYNVEDSC-IMYGVEGDVRYTVPVLA-----------DNIHSL 113 A G + AGYNV + G+E D+ + Sbjct: 128 AFDAFKGTGSYTLGLQAGYNVLLPSRWLLGLEADLTSPNRIGGNASISPPTGTIGGHDHQ 187 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEITPIA--IGGTAGVGV 167 + G++R R GY + D L YAT G + + A E T + +G AG GV Sbjct: 188 TQLAGTVRGRLGYAL-DGWLPYATAGFAWSYDRLRWPSEAAATEETALLWRLGWAAGAGV 246 Query: 168 EVGGLSESLVARLEYRASKYSK-------------VEGFYNTISLGVGMK 204 E+ LS + AR+EY A+ + + + + + LG+ + Sbjct: 247 ELP-LSPAWTARVEYLATGFGRDTARFPIAGHQIESDALIHAVRLGLNYR 295 >gi|323139011|ref|ZP_08074071.1| porin [Methylocystis sp. ATCC 49242] gi|322395765|gb|EFX98306.1| porin [Methylocystis sp. ATCC 49242] Length = 291 Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 75/259 (28%), Gaps = 79/259 (30%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ +V V +L S A AAD R P + G Y GL Sbjct: 1 MRKIAFSVAVLALTAGS---ALAADLPSRK---------EAPVYVPPPPPPMWVGFYVGL 48 Query: 61 SALYNGSFGEEA-------------------------------HHNAGGSIFAGYNVED- 88 +A + + + G GYN + Sbjct: 49 NAGGTWAASTNSASDAWGLANGGTPIHGWVAAASAASWQNGGNNSGFIGGGQIGYNWQFM 108 Query: 89 SCIMYGVEGDVRY--------------------TVPVLADNIHSLHGIGGSLRIRGGYEV 128 + + GVE D++ T V N S G++R R G+ Sbjct: 109 NSFIAGVEADIQGVAGNSPNRDIFGSSFDPISGTNIVTFGNRSSRLDYLGTVRGRLGWLF 168 Query: 129 SDSLLLYATVGPDVAQKYETG--------------KAGEITPIAIGGTAGVGVEVGGLSE 174 + ++L+Y T G + + +G TAG G+E Sbjct: 169 TPTMLVYGTGGLAYGGVSTSATFVTSEIGFPFNSVASASFADTRVGWTAGGGIE-WMFMP 227 Query: 175 SLVARLEYRASKYSKVEGF 193 + A++EY V Sbjct: 228 NWSAKVEYLYYDLGTVSAT 246 >gi|299135509|ref|ZP_07028695.1| OmpA domain protein transmembrane region-containing protein [Afipia sp. 1NLS2] gi|298589733|gb|EFI49942.1| OmpA domain protein transmembrane region-containing protein [Afipia sp. 1NLS2] Length = 229 Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 71/230 (30%), Gaps = 43/230 (18%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL---- 63 + +++A S S AAD R + YV +++ G Y G Sbjct: 1 LLAATVAALSSTSVFAADLAARHYTK---------APAYVAPIYNWTGFYIGAQVGGAFQ 51 Query: 64 -------YNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRYTV-------PVLAD 108 G G + G G N + + G+EG+ A+ Sbjct: 52 GSSGYNATAGVVGTRDDSSFIGGGVVGANYQFAPNWVVGLEGEFNGLSNNRHTFTDATAN 111 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ--KYETGKAGEITPIAIGGTAGVG 166 + + S+ R GY ++YA G + + G T G G Sbjct: 112 TVSIKNDWLASVTGRLGYTW-GPGMIYAKGGVAFRDNGGVTSNVVALVDRNDTGYTVGAG 170 Query: 167 VEVGGLSESLVARLEYRASKY-----------SKVEGFYNTISLGVGMKF 205 +E + + A++EY+ + + +T+ G+ F Sbjct: 171 LEY-MFAPAWSAKVEYQYYNFDHTNVAFATNTASYRDDLHTVKAGINYHF 219 >gi|85714944|ref|ZP_01045929.1| outer membrane autotransporter barrel protein [Nitrobacter sp. Nb-311A] gi|85698141|gb|EAQ36013.1| outer membrane autotransporter barrel protein [Nitrobacter sp. Nb-311A] Length = 654 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 50/181 (27%), Gaps = 43/181 (23%) Query: 51 HDFNGPYAGLSALYN-----------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 +++ G Y G SA G+ + G GY+ + + G+EG + Sbjct: 432 YNWTGLYIGASAGVLNGRNDWSFPGLGTRTNPRYAGFAGGGQIGYDWQIGTWVVGLEGSL 491 Query: 100 RYTVPVLADNI--------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK- 150 + A + + G+ + GY + + L+Y G Sbjct: 492 MGSNARGARSCPNALFYTCENEMNWLGTATAKLGYTIWNRSLVYLRGGAAFGNTRIVTNC 551 Query: 151 ----------------------AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 + A G T G+G E L+ S R E Sbjct: 552 NTGPDRGYIDYSIPAVIAQPGCGANSSKTAAGWTVGLGTEF-ALTRSWTVRAESNYFDLG 610 Query: 189 K 189 Sbjct: 611 T 611 >gi|86749852|ref|YP_486348.1| hypothetical protein RPB_2735 [Rhodopseudomonas palustris HaA2] gi|86572880|gb|ABD07437.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 570 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 69/220 (31%), Gaps = 55/220 (25%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG 69 +S+ L ++QAAD R P + G Y G G Sbjct: 8 LSAALLTPSGTSQAADLAR----------PAAPLAG---AVWTWTGFYVGAHLG-AGFGT 53 Query: 70 EEAHHNAGGSIF--------------AGYNVEDSC--IMYGVEGD------------VRY 101 + + G SI+ AGYN + + G+E D + Y Sbjct: 54 VKVDNPYGPSIYGDTIRVPKALAGLQAGYNWQVPGSPWVLGIELDASALDADGTDTCLAY 113 Query: 102 TVPVLADNIHSLHGIGGSLRIRGG--YEVSDSLLLYATVGPDV----------AQKYETG 149 + ++ N G++ R G + L Y G V A Y Sbjct: 114 SGQFVSANCRVREHALGTVTGRIGRVFGPQGRSLAYLKGGAAVLAGDLTMTTNAVDYLNQ 173 Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 A ++ G T G G+E GLS + EY + + + Sbjct: 174 PAAKLDATRWGWTVGAGLEY-GLSSGWTVKAEYDYAAFGR 212 >gi|254510731|ref|ZP_05122798.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] gi|221534442|gb|EEE37430.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] Length = 228 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 18/173 (10%) Query: 41 IATNRYVPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97 A ++ G Y G Y + + G I GY+ + + G Sbjct: 66 AAGPALAQSSGNWTGFYGGAQIGYADIDTNVSGVDGDGLIGGIILGYDYDLGDWVVGGGF 125 Query: 98 DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 D ++ L+ ++ R GY+V+ LLY T G A +T G Sbjct: 126 DYDWSDVDLSSAATVESVWR--IKARAGYKVNPQGLLYGTAGYADA---DTDNLGSD--- 177 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSK-----VEGFYNTISLGVGMKF 205 G G G E ++ ++ E ++ V+ T+ + V +F Sbjct: 178 -NGWFIGAGYE-QIVAPNISVGGELLYHEFDDFNSTGVDVDATTLQVRVAYRF 228 >gi|163849581|ref|YP_001637624.1| porin [Methylobacterium extorquens PA1] gi|163661186|gb|ABY28553.1| porin [Methylobacterium extorquens PA1] Length = 283 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 76/252 (30%), Gaps = 73/252 (28%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + V S A +A AAD +R +P ++G YAG++A Sbjct: 1 MLKTVLARSAAAFVSTAAVAADLPQREQTPVFAQIPA----------FTWSGFYAGIAAG 50 Query: 64 Y----------------------NGSFGEEAHHNAGGSIFA--GYNVED---SCIMYGVE 96 Y FG G ++ GYN + + + G+E Sbjct: 51 YAFSGRQTVRTTDFTPIGQAVLAASGFGAVRSEQEGATVAGGFGYNYQFTPGTGFVAGIE 110 Query: 97 GDVRYTVPVLADNIHSLHG-------------IGGSLRIRGGYEVSDSLLLYATVGPDVA 143 D++YT + + G G++R R GY + +L+Y T G Sbjct: 111 TDIQYTDLDSSRATSASVGGTTFFLSGRQSLNFLGTVRGRLGYAF-NRVLVYGTGGFAYG 169 Query: 144 Q-------------KYETGKAGEITPIAIGGTAGVGVEVGGLSES---------LVARLE 181 AG + G G GVE +ES ++ + E Sbjct: 170 NVNYEINANVTSALGTIPFDAGRFNNVETGYVYGGGVEYAMPTESFLNFFSANAVIIKAE 229 Query: 182 YRASKYSKVEGF 193 Y F Sbjct: 230 YLHYDLGSRSVF 241 >gi|296447975|ref|ZP_06889882.1| porin [Methylosinus trichosporium OB3b] gi|296254542|gb|EFH01662.1| porin [Methylosinus trichosporium OB3b] Length = 308 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 63/234 (26%), Gaps = 74/234 (31%) Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS------------------FGEEAH 73 H +P+IA P + G Y G + Y FG + Sbjct: 18 HAVAADLPSIAPPPPPPPVFSWTGAYLGANGGYIWGARNGVDSYGVAVIDKDPLFGATSA 77 Query: 74 HNAG-----------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADN------------ 109 G G AGYN + + GVEGDV+ T ++ Sbjct: 78 LGVGNVAAPNLNGAFGGGQAGYNYQVSPRFVIGVEGDVQGTAVQGSEGRYRLLTVPNLPR 137 Query: 110 --------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ--------------KYE 147 + ++R R G+ V LLY T G + Sbjct: 138 YSIGTQTQVDRNIDYLATVRGRVGFAVLPDALLYLTGGLAFGRVSQRVTQTQSVYWAGST 197 Query: 148 TGKAGEI---------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 A +G AG GVE + A+LEY V Sbjct: 198 NFPADSDGFGFAASQFAQTRVGWAAGGGVE-WAFRGNWSAKLEYLYYDLGGVRS 250 >gi|209885046|ref|YP_002288903.1| hypothetical protein OCAR_5916 [Oligotropha carboxidovorans OM5] gi|209873242|gb|ACI93038.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] Length = 574 Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 69/217 (31%), Gaps = 46/217 (21%) Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH 74 A C A +A VVP A+ P+ ++ G Y G G + + Sbjct: 11 TALACLAVSALAFTNVEAREARVVPVSAS----PVLWNWTGFYLGAHLG-AGFGTSKVDN 65 Query: 75 NAGGSIF--------------AGYNVEDSC--IMYGVEGDVR------------YTVPVL 106 G SI+ GYN + + ++GVE DV Y+ + Sbjct: 66 PYGPSIYGDTIRLPGGFAGLQGGYNWQGAGSPWVFGVEADVSAVNADGTNTCLAYSGQFV 125 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSD--SLLLYATVGPDVAQK----------YETGKAGEI 154 + N + GS+ R G +S L Y G Y + E Sbjct: 126 SANCRARQQAMGSITGRIGRTISPDGRTLAYIKGGTAFMSGDLSLTTNAPDYILQPSSER 185 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 G G G+E ++ + + EY + + + Sbjct: 186 RDTRWGWMLGAGLE-HAITGAWSVKAEYAYANFGHRD 221 >gi|159185257|ref|NP_355480.2| outer membrane protein [Agrobacterium tumefaciens str. C58] gi|159140518|gb|AAK88265.2| outer membrane protein [Agrobacterium tumefaciens str. C58] Length = 209 Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 66/219 (30%), Gaps = 24/219 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M + ++ ++A+A +A +AD ++G Y G Sbjct: 1 MSIIKKSLAAVTIAVAIASNAYSADLTNYNTQQSFDYGNQ--------PAFSWSGAYVGA 52 Query: 61 SALYNGSFGEEAHHNAG--GSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG 117 G G + AGYN + + G E + Y N Sbjct: 53 HGGVASPKFSPLASGRGLTGGVQAGYNFQFGSGVVGAEVEGSYLGNDARVPNGRLRERFR 112 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 G+ +++ G + D LLY T G + + G G GVE L Sbjct: 113 GAAKLKAGVAL-DHTLLYGTAGLTTTKFKDGNGVTGPDGWKQGYLVGAGVE-QSFGGGLS 170 Query: 178 ARLEYRASKYSKV-----------EGFYNTISLGVGMKF 205 A+ EY V + + I G+ +F Sbjct: 171 AKFEYNYVSTGNVATTTSSGRSKTDVSDHVIKAGLNYRF 209 >gi|192291529|ref|YP_001992134.1| OmpA domain protein transmembrane region-containing protein [Rhodopseudomonas palustris TIE-1] gi|192285278|gb|ACF01659.1| OmpA domain protein transmembrane region-containing protein [Rhodopseudomonas palustris TIE-1] Length = 246 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 62/195 (31%), Gaps = 36/195 (18%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF----------------GEEAHHNAGG--SI 80 P + +D++G Y G + + S GE H +GG Sbjct: 28 PYTKAPPIIAAAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGG 87 Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDS 131 AGYN + S ++GVE + ++ S G R GY ++ Sbjct: 88 QAGYNWQISNWVFGVEAQGNWADFKGSNVSLLVVPGTTNDSKIDAFGLFTARVGYAW-NN 146 Query: 132 LLLYATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 LLY G V T + G G G+E G S + +EY Sbjct: 147 ALLYVKGGAAVTSDKYTVYGNRTGAITDTASETRWGAAVGGGLEY-GFSPAWTFGVEYDH 205 Query: 185 SKYSKVEGFYNTISL 199 + + T S+ Sbjct: 206 LFMGSRDITFATTSI 220 >gi|312114480|ref|YP_004012076.1| porin [Rhodomicrobium vannielii ATCC 17100] gi|311219609|gb|ADP70977.1| porin [Rhodomicrobium vannielii ATCC 17100] Length = 288 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 67/247 (27%), Gaps = 72/247 (29%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 L S++AL + + P++ + + + G Y G Sbjct: 2 TLTKFALASTVALGTLAI-------AAQANAADIYTPSMKDAPIIVVPPTWTGFYFGGHL 54 Query: 63 LYNGSFGEEAHHN-------------------------AGGSIFAGYNVEDS-CIMYGVE 96 + E + GG F GYN + + G+E Sbjct: 55 GAAWTQLETRKNEYWDGYDDSDLSFATFGGKNLNDQSAFGGGQF-GYNWQTGGNFVLGIE 113 Query: 97 GDVR--------------YTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135 D+ Y + N+ S G G + R GY ++ LLY Sbjct: 114 VDIGGLGSDNERTFLATTYNDVTFSSAYSTAVVNVKSEGGFYGDVTGRLGYAWGNT-LLY 172 Query: 136 ATVGPDVAQKYET---------------GKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 A G Q + G T G G+E L+ + ++ Sbjct: 173 AKGGFAWIQPELKVRTVVSIDDDPNGTYTSSHTYDDTLTGWTIGGGLEFL-LNPNWSVKV 231 Query: 181 EYRASKY 187 EY + Sbjct: 232 EYLHYDF 238 >gi|146340933|ref|YP_001205981.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] gi|146193739|emb|CAL77756.1| putative outer-membrane protein; putative secreted protein [Bradyrhizobium sp. ORS278] Length = 251 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 83/233 (35%), Gaps = 46/233 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L +G ++ A AAD R G++ TI +D++G Y GL Sbjct: 1 MRRL--LLGATTSLALGLAPAIAADLPARTFTKAPGMIATI---------YDWSGFYLGL 49 Query: 61 SALYNGSFGEEAHHNAGGSIFA------------------GYNVEDSCIMYGVEGDVRYT 102 +A + ++ G + A GY + ++GVEG + Sbjct: 50 NAGGGSARTCWTNNVTVGGVAATNAEGCHDATGALAGGQIGYRWQAGSWVFGVEGQGNWA 109 Query: 103 VPVLAD------NIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQKYETG----- 149 ++ + + + G L + GY +++L Y G VA + G Sbjct: 110 NLKGSNTSQLAPAVTNQTKVNGVGLLTGQIGYAW-NNVLWYVKGGAAVAGEKYNGLATAT 168 Query: 150 --KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 + + G T G GVEV G +++ EY ++ I G Sbjct: 169 GTAFDQASATRWGATVGTGVEV-GFAKNWSVGAEYEHIFMGNKNLNFSGIPAG 220 >gi|92117214|ref|YP_576943.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14] gi|91800108|gb|ABE62483.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14] Length = 238 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 65/204 (31%), Gaps = 38/204 (18%) Query: 38 VPTIATNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHNAG---GSIFAGYNVED-SCI 91 T A Y P + +++ G Y G + G G + G + + + Sbjct: 27 PYTKAPPPYTPPQAVYNWTGFYIGGHLGGAFGGDSSLSGSDGRFLGGVQGGADYQFANNW 86 Query: 92 MYGVEGDVRYTVPVLADNIHSLHGIG-------GSLRIRGGYEVSDSLLLYATVGPDV-- 142 + G E + + I GS+ R GY LLYA G Sbjct: 87 VLGAEAQYSWLTNNNGGAVFPGGNIVTGNDRGLGSVTGRLGYAW-GPTLLYAKGGYAFRD 145 Query: 143 AQKYETGKAGEITPIA------IGGTAGVGVEVGGLSESLVARLEYRASKYSKV------ 190 ++ T AG A G T G G+E + + A++EY+ + K Sbjct: 146 SRLGVTDAAGVPLAFATTGNRDNGYTVGAGLEY-MFAPNWSAKVEYQYYNFGKTTFAAGS 204 Query: 191 ---------EGFYNTISLGVGMKF 205 +T+ G+ +F Sbjct: 205 PTDIVGTSFRNDDHTVKAGLNYRF 228 >gi|323137744|ref|ZP_08072820.1| porin [Methylocystis sp. ATCC 49242] gi|322397041|gb|EFX99566.1| porin [Methylocystis sp. ATCC 49242] Length = 506 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 69/217 (31%), Gaps = 39/217 (17%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+KL V ++L+ A AA+ + T+ Y+ F G Sbjct: 1 MRKLAPIVVFTALSF----PAFAAEAPSEEDAPPAAPPRPLWTSFYIGFNRGFGGGVLDS 56 Query: 61 SALY--------NGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV-------- 103 + + GY + + G+E D +++ Sbjct: 57 DVGFVSAVPGLSTATTTTNRASGFIAGGQFGYTYSFANHFVLGLESDFQWSDMRSSHQAT 116 Query: 104 -------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG------- 149 + +IHS GS R R GY V LL Y T G Q +G Sbjct: 117 TFATNPALITNADIHSGIDWFGSTRARAGYSV-GRLLPYVTGGVAYGQVQSSGVQFLGSG 175 Query: 150 --KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 G T +G G G+E L+ +L A+ EY Sbjct: 176 LATTGSRTNTRVGWAMGGGIEF-ALNSNLSAKAEYLY 211 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 56/186 (30%), Gaps = 44/186 (23%) Query: 49 IRHDFNGPYA--------------------GLSALYNGSFGEEAHHNAGGSIFAGYNVE- 87 +D+ G Y G L + G GYN + Sbjct: 276 PSYDWTGFYVGINGGYGGGVVTGSTTFVQPGAPGLAETTTASNRTAGYVGGAQGGYNYQL 335 Query: 88 DSCIMYGVEGDVRYTVPVLA--------------DNIHSLHGIGGSLRIRGGYEVSDSLL 133 I+ GVE D +++ N + G+ R+R GY S + L Sbjct: 336 TKNIVVGVETDAQWSDVKAQHQAATIGGPLGFVYTNTPNDVSWFGTTRLRAGYA-SGNAL 394 Query: 134 LYATVGPD-------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 Y T G +Q G + G G G L+++L R EY Sbjct: 395 SYVTGGVAYGEVNAHGSQISGGVFGGSASQNKAGWALGGGAMY-ALTKNLSMRAEYLYVS 453 Query: 187 YSKVEG 192 +S V G Sbjct: 454 FSGVSG 459 >gi|116254616|ref|YP_770452.1| putative outer-membrane immunogenic protein precursor [Rhizobium leguminosarum bv. viciae 3841] gi|115259264|emb|CAK10397.1| putative outer-membrane immunogenic protein precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 226 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 34/226 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +++ +VGVS L +A AD VP+ + P + G YAGL Sbjct: 14 IKRKIFSVGVSMLMACGASAADLAD----------HSVPSAPS-YDAPGTFSWAGAYAGL 62 Query: 61 SALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG 117 S ++ ++ A GYN + ++G E + Y V + Sbjct: 63 HGGVAASKFNPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVESRFR 122 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY---ETGKAGE----ITPIAIGGTAGVGVEVG 170 G+ + + G D +Y T G + + + G G GVE Sbjct: 123 GAAKAKAGLGF-DRTFVYGTAGVTTTEFEGHRLVSGSDKWKSGPDSWKHGYLFGGGVE-H 180 Query: 171 GLSESLVARLEYRAS-----------KYSKVEGFYNTISLGVGMKF 205 S + A++EY S+ + N I G+ +F Sbjct: 181 AFSGGVSAKIEYNYVINNAVPTTSGGISSRSDLNDNVIEAGLNFRF 226 >gi|312113978|ref|YP_004011574.1| outer-membrane immunogenic protein precursor; secreted protein [Rhodomicrobium vannielii ATCC 17100] gi|311219107|gb|ADP70475.1| putative outer-membrane immunogenic protein precursor; putative secreted protein [Rhodomicrobium vannielii ATCC 17100] Length = 243 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 75/219 (34%), Gaps = 41/219 (18%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + V +L +A+ A D + A G + YV + ++ G Y G + Y Sbjct: 4 KAILTVVTLTVAATGGVNATDIAKSAPGGLKDAP-------YVEVPWNWAGAYYGATIGY 56 Query: 65 NGSFGEEAH-------------HNAGGSIFA---GYNVE-DSCIMYGVEGDVRYTVPVLA 107 GS G +A ++ G + GYN + + G E D + Sbjct: 57 -GSGGSKASVTANANDEHGVDTNDPDGVLLGGTIGYNYQIAPTWLIGAEADFSWLGLQGD 115 Query: 108 ------DNIHSLHGIGG--SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI-- 157 D + G G +LR R GY + L+Y T G ET Sbjct: 116 QGKAVFDGHYWTGGWDGLFTLRGRLGYTM-GRTLIYGTAGYAALHTNETISGNNTNESSF 174 Query: 158 ----AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 G G GVE L+E L + EY + + + G Sbjct: 175 GTDWRSGWVVGGGVE-HFLTERLSVKAEYLHAGFEDLTG 212 >gi|146343440|ref|YP_001208488.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. ORS278] gi|146196246|emb|CAL80273.1| conserved hypothetical protein; putative outer-membrane immunogenic protein precursor; putative secreted protein [Bradyrhizobium sp. ORS278] Length = 242 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 59/210 (28%), Gaps = 39/210 (18%) Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS---------FGEEAHHNAGGSIFAG 83 G R YV +++ G Y G S G ++ G + AG Sbjct: 25 GARSYPYATKAPAYVAPIYNWTGFYLGAHLGGAFSSDNNFSGLGTGNNSNGRFLGGVQAG 84 Query: 84 YNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYA 136 + + + G EG + + + GS+ R GY LLY Sbjct: 85 ADWQFAPTWVIGAEGQYSWLSGSVGAAFPGGYVYNNSQRGLGSITGRVGYTW-GPGLLYV 143 Query: 137 TVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G + E G T G G+E + + A+ EY+ + Sbjct: 144 KGGYAYSDNNEKVTLAGNQVGFATSGDHRNGWTVGGGIEY-MFAPNWSAKAEYQYYNFGS 202 Query: 190 V--------------EGFYNTISLGVGMKF 205 +T GV +F Sbjct: 203 ATFAAPAALVPTGSFTTDDHTFKAGVNYRF 232 >gi|85714675|ref|ZP_01045662.1| possible outer membrane protein [Nitrobacter sp. Nb-311A] gi|85698560|gb|EAQ36430.1| possible outer membrane protein [Nitrobacter sp. Nb-311A] Length = 222 Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 56/176 (31%), Gaps = 28/176 (15%) Query: 51 HDFNGPYAGL----------SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV 99 +++ G Y G + G G + GY+ + ++G+E Sbjct: 41 YNWTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEA-- 98 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 L + GS+ R GY LLY G A T G Sbjct: 99 --NYSFLDTGSFFANRGLGSVTGRLGYTW-GPALLYVKGGYGWADSRFTNGFGGNGGRDG 155 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKV----------EGFYNTISLGVGMKF 205 T G G+E +++ ++EY+ V +TI +G+ +F Sbjct: 156 -YTVGGGLEYL-FTQNWSGKVEYQYYDLGTVNLVAPVVANFRNDQHTIKVGLNYRF 209 >gi|323138453|ref|ZP_08073522.1| porin [Methylocystis sp. ATCC 49242] gi|322396249|gb|EFX98781.1| porin [Methylocystis sp. ATCC 49242] Length = 502 Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 68/217 (31%), Gaps = 49/217 (22%) Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-------------- 66 + AA P + + P + G + G + + G Sbjct: 8 SFAALPTIALSAQAADLPAQKSPPPAPPPVFSWTGFHLGFNRGFGGAVSEARVALAAPGL 67 Query: 67 ------SFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLA------------ 107 +F + + GG I GY+ + ++ GVE D++++ + Sbjct: 68 GGTATRTFDQASGWFVGGQI--GYDYQFENGVVLGVETDMQWSDIRSSHQATTIASNPLL 125 Query: 108 ---DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK---------AGEIT 155 + G+ R R GY +L Y T G Q G G Sbjct: 126 LTNADTSHSLDWFGTTRGRVGYSF-GRMLPYLTGGVAYGQVEARGAQALAAGLVSVGGAR 184 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 +G AG G++ LS L AR EY + V G Sbjct: 185 ETNVGWAAGAGLDF-ALSPRLSARAEYLYLQLPGVSG 220 Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 39/125 (31%), Gaps = 23/125 (18%) Query: 89 SCIMYGVEGDVRYTV--------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134 + GVE D +++ + + + G+ R R G L Sbjct: 336 DRFVVGVETDAQWSGVQAWHQATTVGGPNGYVFTDTPNAMTWFGTTRARLGLA-RGYSLS 394 Query: 135 YATVGPD-------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 Y T G Q G +G T G G E L+ +L R +Y + Sbjct: 395 YVTGGVAYGEITASGTQAAGALFTGAGARSQVGWTVGSGTEY-ALAPNLSLRADYLYVSF 453 Query: 188 SKVEG 192 + V G Sbjct: 454 AGVSG 458 >gi|85713860|ref|ZP_01044849.1| possible outer membrane protein [Nitrobacter sp. Nb-311A] gi|85698986|gb|EAQ36854.1| possible outer membrane protein [Nitrobacter sp. Nb-311A] Length = 224 Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 56/176 (31%), Gaps = 28/176 (15%) Query: 51 HDFNGPYAGL----------SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV 99 +++ G Y G + G G + GY+ + ++G+E Sbjct: 43 YNWTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEA-- 100 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 L + GS+ R GY LLY G A T G Sbjct: 101 --NYSFLDTGSFFANRGLGSVTGRLGYTW-GPALLYVKGGYGWADSRFTNGFGGNGGRDG 157 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKV----------EGFYNTISLGVGMKF 205 T G G+E +++ ++EY+ V +T+ +G+ +F Sbjct: 158 -YTVGGGLEYL-FTQNWSGKVEYQYYDLGTVNLVAPVVANFRNDQHTVKVGLNYRF 211 >gi|296445629|ref|ZP_06887584.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium OB3b] gi|296256874|gb|EFH03946.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium OB3b] Length = 225 Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 22/167 (13%) Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYNVEDS-CIMYGVEGDV 99 P + G Y G+ Y ++ + G + GYN + G+E D Sbjct: 38 PPAFTWRGFYVGVHGGYGFGAFQDNGRSLLGEPNGWLVGVTGGYNYTFGPNFLIGLEADF 97 Query: 100 RYTVPVLAD----NIHSLHGIGG--SLRIRGGYEVSDSLLLYATVGPDV------AQKYE 147 ++ + G+ +LR R G + D L+Y T G Sbjct: 98 DFSGGKGGGSPIAGVVGSSGVDNIMTLRPRAGM-IFDRALVYVTGGFAGVVASGTVGNVY 156 Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 G G+ + G G G+E GL+ +L A+ EY + F Sbjct: 157 NGFFGQQSQYLSGWALGAGIEY-GLAPNLSAKAEYLFTSVGGERYFE 202 >gi|170751779|ref|YP_001758039.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170658301|gb|ACB27356.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 279 Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 64/220 (29%), Gaps = 58/220 (26%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 L V + +A SA AAD RRA + G Y G++A Y Sbjct: 5 LRVTTALAGVAFAGSAFAADLPRRAAPPPVFTP---------VPVFTWTGAYFGINAGYA 55 Query: 66 ------------------------GSFGEEAHHNAGGSIFAGYNVE---DSCIMYGVEGD 98 SF + G GYN + S ++ GVE D Sbjct: 56 FDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEAD 115 Query: 99 VRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 +Y N S G++R R GY D L+Y T G Sbjct: 116 AQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAF-DRTLVYGTGGF 174 Query: 141 DVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177 G G AG G+E ++S + Sbjct: 175 AYGSGSADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFL 214 >gi|255264610|ref|ZP_05343952.1| putative outer membrane protein [Thalassiobium sp. R2A62] gi|255106945|gb|EET49619.1| putative outer membrane protein [Thalassiobium sp. R2A62] Length = 207 Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 17/180 (9%) Query: 40 TIATNRYVPIRHDFNGPY-------AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + D++G Y AG + Y+ + F G N + S ++ Sbjct: 30 PVIAIPPTSNVTDWSGSYCGLSYSSAGGTLSYSFGSPYDYVDETAIGGFCGNNWQRSNLV 89 Query: 93 YGVEGDV-RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151 YG E +V ++ N+ G LR R GY + D L+Y +G ++ G A Sbjct: 90 YGGELNVTGGSLGHDDINVVGELGTRIELRTRVGYALGD-ALVYGFLGYGRSEITWGGNA 148 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY------SKVEGFYNTISLGVGMKF 205 +A GGT G+GV+ +++S+ A E + V N ISL +G KF Sbjct: 149 PGEYGVA-GGTYGLGVDY-MVTDSMFASFEVSNLELKETVTTGIVTHDINVISLRIGWKF 206 >gi|218533177|ref|YP_002423993.1| porin [Methylobacterium chloromethanicum CM4] gi|218525480|gb|ACK86065.1| porin [Methylobacterium chloromethanicum CM4] Length = 299 Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 74/302 (24%), Gaps = 114/302 (37%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG--- 66 ++ L A AAD G P A D++G Y G Y+ Sbjct: 6 LALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVGGHGGYSSAAL 59 Query: 67 SFGE-----------------------------EAHHNAGGSIFAGYNVEDSCIMYGVEG 97 FG A +FAG N + ++ G E Sbjct: 60 GFGNAFQPIVANALRYTVAEAEMNASHLLAARATHSGGASYGVFAGVNYQFEDVVVGFEA 119 Query: 98 DVRY----------------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 D Y + L+ + G++R R GY + L + Sbjct: 120 DYTYFGQSGTTSDQIARYMITKDNFLSTVNLSGQASTKIQDYGTIRGRLGYAFGN-FLPF 178 Query: 136 ATVGPDVAQKYETGK--------------------------------------------- 150 T G + + Sbjct: 179 VTGGLALGRATVRDTVTIQDYGYNNTTYAANQTGTTKSYIDNDGYSVFFQNNPPGSIPAP 238 Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFYNTISLGVGM 203 G G G+E ++ + + R EY+ + + + NT+ G + Sbjct: 239 GTVHGTTKKVTVAGIAVGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAELNTVRGGAAV 297 Query: 204 KF 205 KF Sbjct: 298 KF 299 >gi|319405308|emb|CBI78922.1| putative Hemin binding protein b [Bartonella sp. AR 15-3] Length = 367 Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 24/115 (20%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------------KYETGKAGEIT--PIA 158 G+ RIR G + ++ Y G + E A Sbjct: 255 KQKWIGTSRIRLGLS-AGRVMPYIAGGIAYTKIQGTFAKSIKEIGKENTSASSFDSAETM 313 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------GFYNTISLGVGMKF 205 IG T G G + +++ ++ R EYR S + + + N +G+ KF Sbjct: 314 IGYTLGGGFDF-AMTDRILLRSEYRYSDFGEKKFNKINLKYYKTNDFRVGLAYKF 367 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 32/120 (26%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF- 68 VS LA++ QAAD V VP+ + P+ + + G Y G SF Sbjct: 3 VSILAISLTSRIQAADIV----------VPSNLKSISAPV-YSWEGFYLGGQMGSFSSFT 51 Query: 69 ------------GEEAHHNAG-------GSIFAGYNVEDSC-IMYGVEGDVRYTVPVLAD 108 + G FAG+N + + G++ D+ ++ Sbjct: 52 TLQYNDIDKTKKWNSIDEDFSSDLSGITGGFFAGFNFDWGNRFVLGIDTDIVFSNKRNTK 111 >gi|209885358|ref|YP_002289215.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans OM5] gi|209873554|gb|ACI93350.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans OM5] Length = 173 Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 52/165 (31%), Gaps = 23/165 (13%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSAL--YNGS----------FGEEAHHNAGGSIFAGYNV 86 T A V +++ G Y G + G+ G + G G N Sbjct: 11 YTKAPPAPVAPIYNWTGLYIGAQVGGAFQGNSGFVTDNPLVTGNRDDSSFLGGGVLGANY 70 Query: 87 E-DSCIMYGVEGDVR------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 + + G+EG+ YT D I + S+ R GY ++Y G Sbjct: 71 QFSPNWVLGIEGEFNGLSNNRYTFTDGFDGIRVKNDWLASVTGRLGYTW-GPGMIYPKGG 129 Query: 140 PDVAQKYETGKAGEI--TPIAIGGTAGVGVEVGGLSESLVARLEY 182 + G T G G+E + + A++EY Sbjct: 130 VAFRDNGGIAATTPFLVSRDTSGYTVGAGLEY-MFAPAWSAKIEY 173 >gi|39936789|ref|NP_949065.1| hypothetical protein RPA3728 [Rhodopseudomonas palustris CGA009] gi|39650646|emb|CAE29169.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 670 Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 66/215 (30%), Gaps = 55/215 (25%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG---------------------SIF 81 D++G Y G + AGG + Sbjct: 29 APEAPRAVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQ 88 Query: 82 AGYNVEDSC-IMYGVEGDVR-------YTVPVLADNIHSLHG----IGGSLRIRGGYEVS 129 AGYN + G+E D+ T L H +GG++R R GY Sbjct: 89 AGYNWMLPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAF- 147 Query: 130 DSLLLYATVGPDVAQKYET---GKAGEITPIA----IGGTAGVGVEVGGLSESLVARLEY 182 D L Y T G + + A +G AG GV+V LS + AR EY Sbjct: 148 DGWLPYVTAGFAWSYDRLRWPPDPSLAQQETALLWRLGWAAGAGVDVP-LSPAWSARAEY 206 Query: 183 RASKYS-------------KVEGFYNTISLGVGMK 204 A+ + + + + LG+ + Sbjct: 207 LATGFGSGTVSFPIAGQSVSSDVLTHAVRLGLNYR 241 >gi|192292615|ref|YP_001993220.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris TIE-1] gi|192286364|gb|ACF02745.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris TIE-1] Length = 670 Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 66/215 (30%), Gaps = 55/215 (25%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG---------------------SIF 81 D++G Y G + AGG + Sbjct: 29 APEAPRAVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQ 88 Query: 82 AGYNVEDSC-IMYGVEGDVR-------YTVPVLADNIHSLHG----IGGSLRIRGGYEVS 129 AGYN + G+E D+ T L H +GG++R R GY Sbjct: 89 AGYNWMLPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAF- 147 Query: 130 DSLLLYATVGPDVAQKYET---GKAGEITPIA----IGGTAGVGVEVGGLSESLVARLEY 182 D L Y T G + + A +G AG GV+V LS + AR EY Sbjct: 148 DGWLPYVTAGFAWSYDRLRWPPDPSLAQQETALLWRLGWAAGAGVDVP-LSPAWSARAEY 206 Query: 183 RASKYS-------------KVEGFYNTISLGVGMK 204 A+ + + + + LG+ + Sbjct: 207 LATGFGSGTVSFPIAGQSVSSDVLTHAVRLGLNYR 241 >gi|91978079|ref|YP_570738.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] gi|91684535|gb|ABE40837.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5] Length = 235 Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 32/182 (17%) Query: 40 TIATNRYVPIRHDFNGPYAGLSA---------LYNG----SFGEEAHHNAG--GSIFAGY 84 + VP +++ G Y G++ Y G + + AH+ G G + G+ Sbjct: 26 PLKAAPPVPALYNWTGVYIGINGSAVLSDKRWDYFGPLLPTGDDGAHNFTGLFGGVQVGF 85 Query: 85 NVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSLLLYA 136 + + ++GVE + + +L G + R GY + ++ LLY Sbjct: 86 DYQVGSWVFGVEAQGDWGRARGTSDSLLFANQTNRTLIDAFGLINGRFGYAL-NNALLYV 144 Query: 137 TVGPDVAQKYETGKAGE-------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G V Q+ A + + G T G G+E SE + EY Sbjct: 145 KGGAGVVQEKYDVFATDTGVTFTNASETRWGSTVGAGLE-LAFSEHISVAAEYNHIFLGS 203 Query: 190 VE 191 + Sbjct: 204 RD 205 >gi|310816178|ref|YP_003964142.1| outer membrane protein [Ketogulonicigenium vulgare Y25] gi|308754913|gb|ADO42842.1| outer membrane protein [Ketogulonicigenium vulgare Y25] Length = 202 Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 15/163 (9%) Query: 52 DFNGPYAGLSALYNGSFG-----EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106 + G YAG + Y + G E+ G ++ GY+ + + G+ + Y Sbjct: 46 TWAGAYAGAALTYGETEGSVGGTSESIDGVGVALRGGYDWQFGSWVLGLGAEYAYNNEDG 105 Query: 107 AD-NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 + ++ R GY + D+ L Y + G + G + + G T GV Sbjct: 106 DVFGATAERKDSAAVFARAGYAL-DTWLPYVSAGYTWSDAEVAGTSYD----LEGATYGV 160 Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 GVE ++++ EY + + V+G + LGV +F Sbjct: 161 GVE-KLFTQNISGFAEYSFADFDDVQGVSVEGQGVKLGVNYRF 202 >gi|149914031|ref|ZP_01902563.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b] gi|149812315|gb|EDM72146.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b] Length = 189 Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 20/178 (11%) Query: 22 QAADPVRRAHHGGRGVVPTIATNR-------YVPIRHDFNGPYAGLSALY---NGSFGEE 71 AA + P P D+ GPY G + + + Sbjct: 1 MAALALATGPALAGSATPPEPDPVISTPAPPPAPSSPDWTGPYVGGQIGWGNVDTNLPGV 60 Query: 72 AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 + + G + AGY+ + + G D + L +L + ++ RGGY++ + Sbjct: 61 SGDDVIGGLIAGYDYDFGQWVVGGGLDYDWADIGLGAGNPTLENVF-RVKARGGYKIGNG 119 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 LLY T G A +T G+ G G G E ++ ++ E ++ Sbjct: 120 -LLYGTGGWAQA---DTSTLGDDD----GYFIGAGYE-HMVTPNVSLGGEVLYHEFDN 168 >gi|27382806|ref|NP_774335.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27355979|dbj|BAC52960.1| blr7695 [Bradyrhizobium japonicum USDA 110] Length = 288 Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 54/176 (30%), Gaps = 31/176 (17%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALY------------NGSFGEEAHHNAGGSIFA--G 83 T A V +D+ G Y G + + G+ +GG + G Sbjct: 64 PYTKAPPPVVAPIYDWTGFYIGANGGWGQSHSCVDFVTALGTVASGCGDRSGGVVGGQIG 123 Query: 84 YNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135 Y + S ++G+E + + + G + G+ +S LLY Sbjct: 124 YRWQTSQFVFGLEAQGDWADLKNTRVSLFNPTLSTTAKTDAIGLFTGQLGWAW-NSALLY 182 Query: 136 ATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 G V T GGT GVG E G + + +EY Sbjct: 183 VKGGAAVTSNRLTIFDNTTGIGLVSADNTRWGGTLGVGFEY-GFTPNWSVGVEYDH 237 >gi|86748027|ref|YP_484523.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2] gi|86571055|gb|ABD05612.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2] Length = 638 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 59/221 (26%), Gaps = 45/221 (20%) Query: 29 RAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-----------GSFGEEAHHNAG 77 A V +++ G + G S G+ + A Sbjct: 410 EAVAAAPLYTKAAKAPILVHSAYNWTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAI 469 Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVS 129 G GY+ + + GVEG + T A + G+ + GY Sbjct: 470 GGGQIGYDYQFGKWVVGVEGALNATNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFW 529 Query: 130 DSLLLYATVGPDVAQKYETGK--------------AGEITPIAIGGTAGVGVEVGGLSES 175 D L Y G T + G T G+G E LS++ Sbjct: 530 DRSLWYVRGGGAFGDLKVTTTCNTGPFNPLGLAGCGENASRSRAGWTIGIGSEF-ALSKN 588 Query: 176 LVARLEYRASKYS---------KVEGFYNTI--SLGVGMKF 205 R E ++ N ++GV +F Sbjct: 589 WTVRTETNYFDMGRERYVLPTSTIDVKQNGFISTVGVNYRF 629 >gi|27380621|ref|NP_772150.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27353786|dbj|BAC50775.1| outer-membrane immunogenic protein precursor [Bradyrhizobium japonicum USDA 110] Length = 237 Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 44/201 (21%) Query: 43 TNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHNAG-----GSIFAGYNVED-SCIMYG 94 Y P + +++ G Y G G+F ++ + G + G++ + + G Sbjct: 33 APAYTPPQVIYNWTGFYIGGHVG--GAFAGDSSFQSSDARFLGGVQGGFDYQFAPNWVVG 90 Query: 95 VEGDVRYTVPVLADN---------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD---V 142 VE +Y+ +N + S GS+ R GY L+YA G Sbjct: 91 VEA--QYSWLPTNNNGVTFPLGTQVTSNTDQLGSVTGRIGYTW-GPALVYAKGGYAWRNG 147 Query: 143 AQKYETGKAGEI-TPIAI---GGTAGVGVEVGGLSESLVARLEYRASKYSKV-------- 190 + T G T G G+E + S A+ EY+ + Sbjct: 148 GLGVNVAGVPQGFTATGNNKDGYTVGAGLEY-MFAPSWSAKAEYQYYNFGSTTFTSGPAD 206 Query: 191 ------EGFYNTISLGVGMKF 205 +T+ +GV +F Sbjct: 207 IVGVRGREDEHTVKVGVNYRF 227 >gi|319405140|emb|CBI78746.1| Hemin binding protein D [Bartonella sp. AR 15-3] Length = 295 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 19/110 (17%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------EITPIAIGGTAG 164 G+ R+R G+ + ++ Y G + +G T G Sbjct: 188 KEKWTGATRVRIGFS-AGHIMPYIAAGVSYVDLKDILSVSLFEREAETVEGKKMVGYTFG 246 Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 GV+V + +++V R EYR S + K N +GV KF Sbjct: 247 GGVDVAMI-DNVVMRAEYRYSDFGKKKFAKGEVELSYKTNDFRVGVAYKF 295 >gi|188584272|ref|YP_001927717.1| porin [Methylobacterium populi BJ001] gi|179347770|gb|ACB83182.1| porin [Methylobacterium populi BJ001] Length = 274 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 73/229 (31%), Gaps = 65/229 (28%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + +G++ L+ +A AAD RRA +P + G Y G+ Sbjct: 1 MRNSLILIGLTGALLS--STALAADLPRRAEPPVFTPIP----------VFAWTGAYLGI 48 Query: 61 SALYNGSFGEEAH------------------------HNAGGSIFAGYNVE---DSCIMY 93 +A Y + + GYN + + ++ Sbjct: 49 NAGYAYTESDTLRTAGIGALQANVTNDLRRAAVGLPQDGFTVGGQGGYNFQLTPGTGFVF 108 Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 G+E D +Y VL + + G++R R GY D +L+Y T Sbjct: 109 GLEVDAQYMDLQRSRTETIFRPAFNPNVLTNVYAADLDFLGTVRGRIGYAF-DRVLVYGT 167 Query: 138 VGPDVA---------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 G AG + + G G G+E ++S + Sbjct: 168 GGFAYGTVSQGVTFQTGAPVTYAGARSGVETGYAYGGGIEYALPTDSFL 216 >gi|27379782|ref|NP_771311.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27352935|dbj|BAC49936.1| bll4671 [Bradyrhizobium japonicum USDA 110] Length = 282 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 46/217 (21%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIR-HDFNGPYAGLSALYNG 66 + +++ L+ A AAD + VP + G Y G Sbjct: 48 LVLTAALLSLATPAFAADIIA-----------PAPVKAPVPAAIFTWTGFYIGAHGGGAW 96 Query: 67 S-------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN---- 109 S + G N + ++ G+EG ++ L Sbjct: 97 SKWTGIDPTDPTAVWTSVTASGGIVGGQIGGNYQIGNVVVGLEGTGAWSSVTLNAGGPFG 156 Query: 110 ------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET---------GKAGEI 154 + + ++ R G D +LLYA G + + Sbjct: 157 GGAGFTLSLKNDYIATVAGRFGVAF-DRVLLYAKGGAAFTRDKYNANNGLAGALAGSASG 215 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 + G AG GVE + R EY ++ + Sbjct: 216 SFNRTGWLAGGGVE-WMFMPNWSVRAEYNYMGFAAIT 251 >gi|116255059|ref|YP_770894.1| putative outer membrane protein precursor [Rhizobium leguminosarum bv. viciae 3841] gi|115259707|emb|CAK11704.1| putative outer membrane protein precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 216 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 23/193 (11%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 ++ + V VS+L +A AD VP+ + P + G YAGL Sbjct: 5 KRKIVFVIVSTLMARGASAADLAD----------HSVPSAPS-YDAPGTFSWAGAYAGLH 53 Query: 62 ALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGG 118 +++ ++ A GYN + ++G E + Y V G Sbjct: 54 GGVAAPKFNPFNNDRAPAVGAQVGYNFQAGPGVFGAELEGSYLNNEVRVPGGKVESRFRG 113 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEIT------PIAIGGTAGVGVEVGG 171 + + + G + D +Y T G + G G G GVE Sbjct: 114 AAKAKAGLGL-DRTFIYGTAGVTTTEFEGRRPVFGSDKWKSGPESWKQGYLFGGGVE-HA 171 Query: 172 LSESLVARLEYRA 184 + A++EY Sbjct: 172 FPGGVSAKIEYNY 184 >gi|83308666|emb|CAJ01574.1| outer membrane protein [uncultured bacterium] Length = 304 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 55/169 (32%), Gaps = 43/169 (25%) Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSC----IMYGVEGDV-------------------RY 101 GS H G GYN + + + G+E D+ + Sbjct: 86 TGSISPVNHSGFIGGGQVGYNYQFNNSWSSWVAGIEADIQGVAASNSAHLVFGQAFVPGF 145 Query: 102 TVPVLADNIHSLH--GIGGSLRIRGGYEVSDSLLLYATVGPD---------VAQKYETGK 150 + N+ S G++R R G+ + +LL Y T G + Q E Sbjct: 146 AGSPIDQNLSSSMTGDFLGTVRGRLGFTIIPTLLFYGTGGLAYGQTDSRTSITQIVENDP 205 Query: 151 A--------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 A G I+ +G TAG G E + + ++EY V Sbjct: 206 ALPNHYSSFGSISNSRVGWTAGGGGEWL-FAPNWSVKVEYLYYNLGSVS 253 >gi|323137952|ref|ZP_08073026.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] gi|322396671|gb|EFX99198.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] Length = 302 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 66/263 (25%), Gaps = 83/263 (31%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + + ++ + A AAD +P + P + G Y GL Sbjct: 1 MKSIASSAVLTLSLIGG--GAFAADL----SSHKLPPLPELPAMETTP----WAGFYIGL 50 Query: 61 SALYNGSFG---------------------------------EEAHHNAGGSIFAGYNVE 87 +A + G GYN Sbjct: 51 NAGGAWNASTAVNLLSAPVFVAPGIGEEIWAATSSFAASRALSTQAAGFIGGGQLGYNWR 110 Query: 88 -DSCIMYGVEGDVRYTVPVLADNIHSLH--------------------GIGGSLRIRGGY 126 + GVE D++ + G++R R GY Sbjct: 111 FSETFIAGVEADIQGVAGGANSARNVSLLPTPAAGLSYLTTLSASKRLDYLGTVRGRIGY 170 Query: 127 EVSDSLLLYATVGPDVAQKYETGK------------------AGEITPIAIGGTAGVGVE 168 V+ +LL YAT G AG + G T G G+E Sbjct: 171 LVTPTLLAYATGGLAYGGVTARADFFQTIPNDTPGFELLAINAGRFSNTRAGWTVGGGLE 230 Query: 169 VGGLSESLVARLEYRASKYSKVE 191 S+ + EY V Sbjct: 231 WMFSSD-WSLKAEYLYYDLGGVT 252 >gi|323137959|ref|ZP_08073033.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC 49242] gi|322396678|gb|EFX99205.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC 49242] Length = 837 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 44/151 (29%), Gaps = 34/151 (22%) Query: 75 NAGGSIFAGYNVE-DSCIMYGVEGDV----RYTVPVLADNIHSLHG-------------- 115 G + G N + GVE D+ T + G Sbjct: 642 GFIGGLQLGANWNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLN 701 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------KAGEITP-------IAIGG 161 G++R R GY + +LL+Y T G T +G Sbjct: 702 YLGTVRGRLGYLATPTLLVYGTGGMAYGGVVSNTAIFTRRVGGTSQTQVNPVFQDTLVGW 761 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 +AG GVE L + A+++Y Sbjct: 762 SAGGGVEWMFL-PNWSAKVDYLHYDLGNARA 791 >gi|220979417|gb|ACL97990.1| outer membrane protein B3 [Rhizobium leguminosarum bv. viciae] Length = 216 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 67/194 (34%), Gaps = 23/194 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +++ +VGVS L +A AD VP+ + P + G YAGL Sbjct: 4 IKRKIFSVGVSMLMACGASAADLAD----------HSVPSAPS-YDAPGTFSWAGAYAGL 52 Query: 61 SALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIG 117 S ++ ++ A GYN + ++G E + Y V + Sbjct: 53 HGGVAASKFNPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVESRFR 112 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKY---ETGKAGE----ITPIAIGGTAGVGVEVG 170 G+ + + G D +Y T G + + + G G GVE Sbjct: 113 GAAKAKAGLGF-DRTFVYGTAGVTTTEFEGHRLVSGSDKWKSGPDSWKHGYLFGGGVE-H 170 Query: 171 GLSESLVARLEYRA 184 S + A++EY Sbjct: 171 AFSGGVSAKIEYNY 184 >gi|115524371|ref|YP_781282.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518318|gb|ABJ06302.1| OmpA domain protein transmembrane region-containing protein [Rhodopseudomonas palustris BisA53] Length = 235 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 63/203 (31%), Gaps = 40/203 (19%) Query: 39 PTIATNRYVPI--RHDFNGPYAGLSALYNGSFGEEAHHNAG---GSIFAGYNVEDS-CIM 92 P Y +++ G Y G + + + G + G + + + + Sbjct: 27 PATKAPAYTAPEIVYNWTGFYIGGHVGGAFAGDDNITGSDGRFLAGVQGGADYQFARNWV 86 Query: 93 YGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 G+E +Y+ N + + GS+ R GY LLYA G Sbjct: 87 VGIEA--QYSWLPTDGNGGLLYPGNTLVTQDNRGLGSVTGRLGYSW-GPALLYAKGGYAF 143 Query: 143 AQKYETGKAGEITPIAI------GGTAGVGVEVGGLSESLVARLEYRASKYSK------- 189 P A G + G G+E + + A++EY+ + Sbjct: 144 RDSSIDVSNLGAQPFATSGNKKDGYSVGGGLEYL-FAPNWSAKVEYQYYNFGNTSFTGGP 202 Query: 190 -------VEGFYNTISLGVGMKF 205 V +T+ G+ +F Sbjct: 203 PDIVGSSVRNDEHTVKAGINYRF 225 >gi|119383601|ref|YP_914657.1| putative outer membrane protein [Paracoccus denitrificans PD1222] gi|119373368|gb|ABL68961.1| putative outer membrane protein [Paracoccus denitrificans PD1222] Length = 199 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 28/196 (14%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ A S +A ++ A PV + D+ G YAGL Sbjct: 1 MKKVGYAALASLIAGGAYAGGYVA-PVVEQPVV-------APAPVTITPESDWTGFYAGL 52 Query: 61 SALY-NGSFGE-----EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH 114 +G G + G + AGY + + G E D ++ + + Sbjct: 53 QYGKGSGDLGNRGALADFGDYDGYGLHAGYQRDLGRFVLGGELDYN----KISPDENYDD 108 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 G LR+R G ++ L Y T+G + + G T G+G + ++E Sbjct: 109 GDLTRLRLRAGADM-GRFLPYVTLGAA------KISVDDFSET--GLTYGLGADF-KVTE 158 Query: 175 SLVARLEYRASKYSKV 190 EY S + V Sbjct: 159 RFTVGAEYSRSDFKDV 174 >gi|114706584|ref|ZP_01439485.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506] gi|114537976|gb|EAU41099.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506] Length = 243 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 27/158 (17%) Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA-------------DNIH 111 +G+ E G + AGY+V+ + G D+ T ++ + Sbjct: 66 DGTGFETTAGGGLGGVQAGYDVQLGRAVLGGVADISLTGIDADVSTRERAGGVETTNSAN 125 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-------------ITPIA 158 + G++R R GY SD +L Y G + T E + Sbjct: 126 TELDYLGTVRARAGYAASDRVLAYGHGGLAYGRTDTTISESERRGGVTNTQTESRKSDTK 185 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 G G G+E ++++ + EY K + ++ Sbjct: 186 YGYAVGAGLEYKA-TDNVSLQTEYGYHDLGKDRLYSDS 222 >gi|126736404|ref|ZP_01752146.1| outer membrane protein, putative [Roseobacter sp. CCS2] gi|126714225|gb|EBA11094.1| outer membrane protein, putative [Roseobacter sp. CCS2] Length = 211 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 24/156 (15%) Query: 46 YVPIRHDFNGPYAGLS-----------ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94 D++G YAG SF + + S FAGY ++ + G Sbjct: 27 PTVALADWSGAYAGAQLDVLTGDEVSLGFAAQSFEDVIETDTIISGFAGYQLQQGDFVIG 86 Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLR-----IRGGYEVSDSLLLYATVGPDVAQKYETG 149 E + V +++ G+ +R R GY++ D L+Y G ++ + Sbjct: 87 GELSLGQANGVRFEDVD---GLDTDVRLVDVKARVGYDLGD-ALVYGVAGFSQSRLLDID 142 Query: 150 KA---GEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 + G + G G GV+ ++E EY Sbjct: 143 EDDLEGLDLETSTGVNYGFGVDYR-VTEQFTVGAEY 177 >gi|326387856|ref|ZP_08209462.1| porin [Novosphingobium nitrogenifigens DSM 19370] gi|326207902|gb|EGD58713.1| porin [Novosphingobium nitrogenifigens DSM 19370] Length = 200 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 19/173 (10%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGG------------SIFAGYNVED-SCIMYGVEG 97 FNGP+ G + + G +F G + + G + Sbjct: 27 KTFNGPFIGAQGGWEENSVNNPSTGVGPTNLYGTGDTGTLGVFVGQDYRILKNFVIGGQA 86 Query: 98 DVRY--TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI- 154 +V + + L +R GY + D LLY G + A Sbjct: 87 EVNFPINSHITDGTTTVDPKRSVDLSLRAGYVLRDKTLLYVRGGYSNVRASTIINAETPI 146 Query: 155 --TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + G G G+E +++ + R+EYR + S+ G ++ L +G+ + Sbjct: 147 YVSGSQNGWMLGGGIE-QYVTKHITGRMEYRYTNLSEGAGKFDRHQLLLGVAY 198 >gi|240141692|ref|YP_002966172.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens AM1] gi|240011669|gb|ACS42895.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens AM1] Length = 299 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 74/302 (24%), Gaps = 114/302 (37%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG--- 66 ++ L A AAD G P A D++G Y G Y+ Sbjct: 6 LALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVGGHGGYSSAAL 59 Query: 67 SFGE-----------------------------EAHHNAGGSIFAGYNVEDSCIMYGVEG 97 FG A +FAG N + ++ G E Sbjct: 60 GFGNAFQPIVATALRYSVVEAEMNASQLLAARSTHSGGASYGVFAGVNYQFEDVVVGFEA 119 Query: 98 DVRYTVPV----------------------LADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 D Y L+ + G++R R GY + LL + Sbjct: 120 DYTYFGQSGTTSDQIARYMITKDNYLRTVDLSGQASTKIQDYGTIRGRLGYAFGN-LLPF 178 Query: 136 ATVGPDVAQKYETGK--------------------------------------------- 150 T G V + Sbjct: 179 VTGGVAVGRATVHNTVTIQNYGYNNTIYATNQTGTTKSYIDNEGYSVFYQNNPPGSIPAP 238 Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFYNTISLGVGM 203 G G G+E ++ + + R EY+ + + + NT+ G + Sbjct: 239 GTVHGTTKKVTVTGIAVGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAELNTVRGGAAI 297 Query: 204 KF 205 KF Sbjct: 298 KF 299 >gi|91975493|ref|YP_568152.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris BisB5] gi|91681949|gb|ABE38251.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris BisB5] Length = 645 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 55/205 (26%), Gaps = 42/205 (20%) Query: 22 QAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN-----------GSFGE 70 A D + A + V +++ G + G S G+ + Sbjct: 410 FAPDAIVAAPLYTK----AAKAPVLVRSAYNWTGFFIGGSFGALNGRTDWTFQPVGTRTD 465 Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRI 122 A G GY+ + + GVEG++ T A + G+ Sbjct: 466 PRFAGAIGGGQIGYDHQFGKWVVGVEGNLFATNANGARPCPNGVFFTCENNVSWMGTATA 525 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGK------------------AGEITPIAIGGTAG 164 + GY D L Y G T + G T G Sbjct: 526 KLGYAFWDRSLWYVRGGGAFGDLKVTTNCNTGPVVPNPAFLVVAGCGESASRNRAGWTIG 585 Query: 165 VGVEVGGLSESLVARLEYRASKYSK 189 G E LS++ R E + Sbjct: 586 FGSEF-ALSKNWTVRAETNYFDMGR 609 >gi|86751789|ref|YP_488285.1| hypothetical protein RPB_4691 [Rhodopseudomonas palustris HaA2] gi|86574817|gb|ABD09374.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 562 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 40/209 (19%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG- 78 ++ A + A +P + + P++ + G Y G GSFG+ + + G Sbjct: 5 ASTTAMLILAATTAAAADLPRLPLSPAAPVQWSWTGLYWGAHLG--GSFGQTSFSDPAGP 62 Query: 79 --------------SIFAGYNVEDS-CIMYGVEGDVR------------YTVPVLADNIH 111 I GYN + + + GVE DV + ++ N Sbjct: 63 GLYGGQVRSPAALAGIQLGYNYQPNRNWLIGVEADVSAMNGNGTQSCLVSSGLFISANCR 122 Query: 112 SLHGIGGSLRIRGGYEVSD--SLLLYATVGPD----VAQKYETGKAGEITPI---AIGGT 162 +L R G+ LLYA G G T G T Sbjct: 123 VRQDALATLTGRAGFVTGPGGRTLLYAKAGAAFLSERLDITIGNPIGSSTESTDGRWGWT 182 Query: 163 AGVGVEVGGLSESLVARLEYRASKYSKVE 191 AG G+E L+ + + EY + + + Sbjct: 183 AGAGIE-RALAPAWSVKFEYDYANFGSRD 210 >gi|323139010|ref|ZP_08074070.1| porin [Methylocystis sp. ATCC 49242] gi|322395764|gb|EFX98305.1| porin [Methylocystis sp. ATCC 49242] Length = 294 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 56/190 (29%), Gaps = 41/190 (21%) Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRYTVPVL 106 H + AGLSA + + G GYN + + + GVE D++ Sbjct: 75 SPIHGWA---AGLSAT--SAPTSNNNSGFIGGGQIGYNWQFMNSFLVGVEADIQGVAGNS 129 Query: 107 ADNI--------------------HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 S G++R R G+ + +LL+Y T G Sbjct: 130 GSQNIFGASSDPFTGTTFATFGTRSSRLDYLGTVRGRLGWLFTPTLLVYGTGGLAYGGVS 189 Query: 147 ETG--------------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 +G TAG G E + A++EY V Sbjct: 190 TNSSFVTSELGIGLSSVGGTTFADTRVGWTAGGGFE-WMFMPNWSAKVEYLYYDLGTVSA 248 Query: 193 FYNTISLGVG 202 +I VG Sbjct: 249 SGASIEPVVG 258 >gi|83942577|ref|ZP_00955038.1| outer membrane protein, putative [Sulfitobacter sp. EE-36] gi|83846670|gb|EAP84546.1| outer membrane protein, putative [Sulfitobacter sp. EE-36] Length = 202 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 75/205 (36%), Gaps = 20/205 (9%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++ + LA +F A A + P A + + D+ G Y GL Sbjct: 1 MKRTMKLASAAVLASTAFAGATYAGSLAEPVVEPVMTAPVPAPD----LGGDWTGFYTGL 56 Query: 61 SALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG 118 Y+ + + G AGYN + + G E D T L D G Sbjct: 57 QLGYSDAEVDNGLEGDNGSYGFHAGYNYDFGRFVLGGELDYDKTDIDLDDAAGVTQGSID 116 Query: 119 SL---RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 S+ +I+GGY++ S L+YAT G A G+ G+G++ + Sbjct: 117 SVARAKIKGGYDL-GSTLIYATGGYARADTSL----GDEDGAFY----GIGMDYKITEQY 167 Query: 176 LVAR--LEYRASKYSKVEGFYNTIS 198 V LE++ + V G ++ Sbjct: 168 SVGAELLEHKFDDVNGVSGDDADVT 192 >gi|27380105|ref|NP_771634.1| hypothetical protein blr4994 [Bradyrhizobium japonicum USDA 110] gi|27353259|dbj|BAC50259.1| blr4994 [Bradyrhizobium japonicum USDA 110] Length = 296 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 64/188 (34%), Gaps = 43/188 (22%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSAL--------------YNGSFGEEAHHNAGGSIFA- 82 T A V +D++G Y G++ GE H+ GG+I Sbjct: 64 PYTKAPAPMVAAIYDWSGFYIGINGGGGSAHSCWDFVTPVTGTLVGEGCHNATGGTIGGQ 123 Query: 83 -GYNVEDSCIMYGVEGDVRY--------------TVPVLADNIHSLHGIGGSLRIRGGYE 127 GY + + ++G+EG + + V D S G + + GY Sbjct: 124 VGYRWQSASWVFGLEGQGNWADFSGDNISLLFPGSALVTGDRNRSRIDSFGLITGQVGYA 183 Query: 128 VSDSLLLYATVGPD-VAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSESL 176 +S+LLY G V K++ A G T G G+E G + + Sbjct: 184 W-NSVLLYVKGGAAVVGDKFDIYAAPGTPGAGTLLASGRDTRWGATVGAGLEF-GFAPNW 241 Query: 177 VARLEYRA 184 +EY Sbjct: 242 SVGVEYDH 249 >gi|148255738|ref|YP_001240323.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146407911|gb|ABQ36417.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] Length = 260 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 57/194 (29%), Gaps = 43/194 (22%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF-----------------GEEAHHNAGG--SIF 81 YV + G Y G + + S E H+ G Sbjct: 32 APPPAYVTPLPSWAGFYLGANGGADWSRNCWTLNRVNGVPVVPTQSEGCHNATSGLIGGQ 91 Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADN----------IHSLHGIGGSLRIRGGYEVSDS 131 GY + + ++G+E +T ++ ++ G + GY + Sbjct: 92 IGYRWQAASWVFGLEAQGNWTDLKSSNASSAAFAAGITNNTKTDAIGLFTGQIGYAWGN- 150 Query: 132 LLLYATVGPDVAQKYETGKA------------GEITPIAIGGTAGVGVEVGGLSESLVAR 179 +L Y G VA TG A + GGT G GVE G + + Sbjct: 151 VLWYVKGGAAVAHNKYTGTANAAAPVAVGTLLDSASETRWGGTVGTGVEF-GFAPNWSVA 209 Query: 180 LEYRASKYSKVEGF 193 +EY + Sbjct: 210 VEYDHLFMGSRDIT 223 >gi|316935831|ref|YP_004110813.1| outer membrane insertion C-terminal signal [Rhodopseudomonas palustris DX-1] gi|315603545|gb|ADU46080.1| outer membrane insertion C-terminal signal [Rhodopseudomonas palustris DX-1] Length = 263 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 86/277 (31%), Gaps = 86/277 (31%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ +A V +A +A AAD G ++ G Y G Sbjct: 1 MRRVVVAATVGVMA----QTAYAADMPDYGPLRG--------ALVETARVVNWEGFYVGG 48 Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88 A Y S G+ + H G FAGYN + Sbjct: 49 QAGYGTSDMNFTNSTSDIASNLLANTVIESQMGVSSWPVLGKTSSHGQGWGAFAGYNAQW 108 Query: 89 SCIMYGVEGD-----------------VRYTVPVLADNIHSLHGIG----GSLRIRGGYE 127 ++ GVE + + Y + S I GS R+R GY Sbjct: 109 DDVVLGVEANYMHGSFGGSAIGSMGRQITYNNVNYSATYTSSAAINVNDIGSARLRAGYA 168 Query: 128 VSDSLLLYATVGPDVAQKYETGKAG------------------EITPIAIGGTAGVGVEV 169 S L YA +G + Q A + G G+G++ Sbjct: 169 F-GSFLPYAFIGASLGQADIVRTATITGTQGGSTVMPLSATRVQNGHFIYGYAGGLGMD- 226 Query: 170 GGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205 L L R E+ K++ V+ +T+ G+G KF Sbjct: 227 MMLYRGLFLRAEWEYLKFAAPVDTSVSTVRAGLGYKF 263 >gi|319406586|emb|CBI80228.1| Hemin binding protein E [Bartonella sp. 1-1C] Length = 305 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 19/110 (17%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--------GKAGEITPIAIGGTAG 164 G+ R+R G+ +D ++ Y G A+ +T + +G T G Sbjct: 198 KEKWTGATRVRIGFA-ADRIMPYIAAGVSYAELQDTLSVLVSRRNAEADEEKKMVGYTFG 256 Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 G ++ L++S + R EYR S + K N +GV KF Sbjct: 257 GGFDI-ALAKSFIMRTEYRYSDFGKKKFAKGEVELSYKTNDFRVGVAYKF 305 >gi|170750581|ref|YP_001756841.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170657103|gb|ACB26158.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 277 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 64/225 (28%), Gaps = 61/225 (27%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M KL ++ + +A AAD RRA + G Y G+ Sbjct: 1 MTKLLASLAAFTALTG---AASAADLPRRAAPPPVFTP---------VPVFTWTGAYFGI 48 Query: 61 SALYN------------------------GSFGEEAHHNAGGSIFAGYNVE---DSCIMY 93 +A Y SF + G GYN + S ++ Sbjct: 49 NAGYAFDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVI 108 Query: 94 GVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEVSDSLLLY 135 GVE D +Y N S G++R R GY D L+Y Sbjct: 109 GVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAF-DRTLVY 167 Query: 136 ATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177 T G G G G G+E ++S + Sbjct: 168 GTGGFAYGSGSADRSFGGYAGNDSFRTGWAVGGGIEYALPTDSFL 212 >gi|254564200|ref|YP_003071295.1| outer-membrane immunogenic protein [Methylobacterium extorquens DM4] gi|254271478|emb|CAX27493.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens DM4] Length = 299 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 74/302 (24%), Gaps = 114/302 (37%) Query: 10 VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG--- 66 ++ L A AAD G P A D++G Y G Y+ Sbjct: 6 LALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVGGHGGYSSAAL 59 Query: 67 SFGE-----------------------------EAHHNAGGSIFAGYNVEDSCIMYGVEG 97 FG A +FAG N + ++ G+E Sbjct: 60 GFGNAFQPIVANALRNTVAEIEMGASHYLAARATHSGGASYGVFAGINYQFEDVVAGIEA 119 Query: 98 DVRY----------------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 D Y T L + G++R R GY + L + Sbjct: 120 DYTYFGRSGTAFDQIARYSITKDNYLTTVDLTGQASTKIQDYGTIRGRLGYAFGN-FLPF 178 Query: 136 ATVGPDVAQKYETGK--------------------------------------------- 150 T G V + Sbjct: 179 FTGGLAVGRATVNDTVTVQNYAYNSATYASNQTGTTRSYINNYGYSAFYQNSPPDSIPAP 238 Query: 151 ----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFYNTISLGVGM 203 G G G+E ++ + + R EY+ + + + NT+ G + Sbjct: 239 GTVYGTTKKVTVAGIAVGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAELNTVRGGAAI 297 Query: 204 KF 205 KF Sbjct: 298 KF 299 >gi|312115597|ref|YP_004013193.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC 17100] gi|311220726|gb|ADP72094.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC 17100] Length = 254 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 70/217 (32%), Gaps = 40/217 (18%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M K +A + LA SA A D +G P + G + GL Sbjct: 1 MNKTLIATASVAALLAMGGSALAGDL------YAKGGYKDAPVVVAEP---TWTGFHLGL 51 Query: 61 SAL------------YNGSFGEEAHHN-----AGGSIFA----GYNVEDSCIMYGVEGDV 99 Y+ GE +G +F GY+ + + G+ + Sbjct: 52 GVGGAAVNHEIDAGLYDVRSGESKSIAGIDGISGTGVFGTVEVGYDRQYGNFVGGIFFNY 111 Query: 100 RYTVPVLADNIHSLHGIGG-------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152 + + D H + ++ R GY V+ S L Y G + + Sbjct: 112 DFGDDISTDVSLLGHDLASVKQTDSWTVGGRLGYLVNASTLAYVLGGYTESTFELSVPVA 171 Query: 153 --EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 G T G G+E L+ SL + EYR +++ Sbjct: 172 NFSTDDTFSGWTVGGGLET-KLTSSLSLKGEYRYTEF 207 >gi|13470603|ref|NP_102172.1| outer membrane protein-like [Mesorhizobium loti MAFF303099] gi|14021345|dbj|BAB47958.1| outer membrane protein-like [Mesorhizobium loti MAFF303099] Length = 430 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 40/200 (20%) Query: 44 NRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIF---------------AGYNVED 88 + +++ G Y G + G+ + + GG GY+ + Sbjct: 232 ASFAAPTYNWTGFYVGGALG-AGTAVHDLGVDLGGGALDLNGIGSEGVLGEASIGYDYDF 290 Query: 89 SCIMYGVEGDVRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-- 141 + GV+ D Y+ + +I + G R G +V++S L Y G Sbjct: 291 GSWVAGVQLDASYSGIRSKLDIPGGSIKLDNDYGFDALARVGAKVNESTLAYVIGGYSYQ 350 Query: 142 -VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------- 191 I G T G G+E +S ++ LEYR S++ K + Sbjct: 351 HFDLHASDPVGDIIDWNKSGFTVGGGLET-AVSSNMTVGLEYRYSQFGKKDFSSEFGAPD 409 Query: 192 ------GFYNTISLGVGMKF 205 + T+ +G KF Sbjct: 410 GTLTDKASFQTVRIGAKYKF 429 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 72/211 (34%), Gaps = 40/211 (18%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 FL VS++AL +AQAAD V+ G +++G Y G+ + Sbjct: 10 FLLGAVSAVAL--MSAAQAADVVQPVEASG----------------FNWSGAYIGIGGGF 51 Query: 65 NGS-----------FGEEAHHNAGGSIFAGYNVE-DSCIMYGV-----EGDVRYTVPVLA 107 S F + G + AGY+ + G G++ ++ + Sbjct: 52 GASVHKFSVAPIIDFNGIGGNGVFGELTAGYDYMVSDRFLLGGFIDANGGNIGPSISIPG 111 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI----TPIAIGGTA 163 +I + G + +R GY ++ L Y G G T G Sbjct: 112 ADIDLTNSYGFDVGLRAGYLLNPDTLGYVLGGYSWQHFKLDGSGFAEGLNFTQNRSGYVL 171 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 GVG+E L + + EYR + Y Sbjct: 172 GVGMET-VLRGNWTLKTEYRYAAYGDKSVID 201 >gi|163746512|ref|ZP_02153870.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45] gi|161380397|gb|EDQ04808.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45] Length = 201 Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 14/172 (8%) Query: 29 RAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYN 85 V V + ++ G Y GL + G + AGY+ Sbjct: 28 ENTTVEAPVFTPAPMPTPVAVDGNWTGFYTGLQVGQTDIDSDSGTLDGDDTSYGFHAGYD 87 Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + + G E D T L + + +++ GY+ ++ L+YAT G A Sbjct: 88 YDFGKFVLGGELDYDKTDIDLGTAGATADSV-ARAKVKAGYDFGNT-LVYATAGAARADT 145 Query: 146 YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197 G+ T AG+GV +++ E K+ V G + + Sbjct: 146 SV----GDETGPF----AGLGVTY-KVTDRYTVGGEVLQHKFDDVGGTGDDL 188 >gi|220914733|ref|YP_002490041.1| porin [Methylobacterium nodulans ORS 2060] gi|219952484|gb|ACL62874.1| porin [Methylobacterium nodulans ORS 2060] Length = 287 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 49/173 (28%), Gaps = 49/173 (28%) Query: 53 FNGPYAGLSALYNGSFGEEAH---------------------------HNAGGSIFAGYN 85 + G YAG +A Y G G GYN Sbjct: 43 WTGFYAGFNAGYGFDTGPNRGPTVIGVGPATGLVIVPTVIAFRNESNLDGFTGGGQIGYN 102 Query: 86 VED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIRGG 125 + + ++ G+E D +Y N + G++R R G Sbjct: 103 YQFTPGAGVVIGLEADAQYVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGRLG 162 Query: 126 YEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177 Y D L+Y T G G TAG GVE ++S + Sbjct: 163 YAW-DRTLIYGTGGFAYGSGGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFL 214 >gi|323137911|ref|ZP_08072986.1| porin [Methylocystis sp. ATCC 49242] gi|322396914|gb|EFX99440.1| porin [Methylocystis sp. ATCC 49242] Length = 259 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 46/226 (20%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYA---- 58 V + ++ +A AAD R P + + G + Sbjct: 2 TFKATVVGALASVLMIGAASAADLPSRKAPPEYIPPPPV---------FSWEGWHIGVVG 52 Query: 59 ------GLSALYNGSFGE-----EAHHNAGGSIF-----AGYNVE-DSCIMYGVEGDVRY 101 ++ + FG + + G S + +GY + + + G E + Y Sbjct: 53 GYGGGSSSTSSWIWDFGAVPAVWNVNTSRGTSGYLVGYESGYTWQFSNNFVLGYESEFSY 112 Query: 102 ------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--- 152 + + G+ R+R GY +L Y T G + +G Sbjct: 113 ADVRSNNTNSWFGGVSNRLEWFGAERLRFGYAF-GRILPYVTGGLAYGRVKASGTDSIGG 171 Query: 153 -----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 + G T G G+E + + EY + G Sbjct: 172 FLFPTNASTWQAGWTVGAGLEY-AFWDKFSIKAEYLYTSMKGPSGT 216 >gi|310816896|ref|YP_003964860.1| outer membrane protein [Ketogulonicigenium vulgare Y25] gi|308755631|gb|ADO43560.1| outer membrane protein [Ketogulonicigenium vulgare Y25] Length = 241 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 59/165 (35%), Gaps = 31/165 (18%) Query: 53 FNGPYAGLSALYN-----------------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95 F G Y G S Y G GE +IF GY ++G Sbjct: 48 FTGAYVGASLGYTFSEDDRVGVHTPAGTFLGDIGEFELAGPSAAIFGGYRWNSGKWVFGP 107 Query: 96 E---------GDVRYTVPVLADNIHSLH-GIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 E D+ Y P+ A + + +LR GYEV+ + L+Y +G + Sbjct: 108 EVSVRFGDVSDDISYAGPIPAASTGTKELNWEAALRATLGYEVTPTTLVYGFLGYSAVEY 167 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 + T G TAG+GVE L+++ R Y + Y Sbjct: 168 DYVLNGAITLDETVSQNGLTAGLGVE-HALNDTWAVRGLYVYNDY 211 >gi|170741253|ref|YP_001769908.1| porin [Methylobacterium sp. 4-46] gi|168195527|gb|ACA17474.1| porin [Methylobacterium sp. 4-46] Length = 300 Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 82/309 (26%), Gaps = 116/309 (37%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 ++ + ++ L + A+AAD G P +++G Y G Sbjct: 2 RIVTSTLLAGLCVCGLTPARAADLDFATLRGTSYDAPA--------PAGNWDGFYFGGHG 53 Query: 63 LYNGSF--------------------------------GEEAHHNAGGSIFAGYNVEDSC 90 + + G + + G N + Sbjct: 54 GWTSTSFGFGSVFQAPVANYLRQTKFESDLNASTLLHPGSMRRDSTTFGAYVGINFQLDE 113 Query: 91 IMYGVEGDV------RYTVPVLADNIHSLHGI----------------GGSLRIRGGYEV 128 + G E D +T + I G +LR R GY+ Sbjct: 114 FVAGAELDYTHLSARGWTSDEIGRAIVGSDGWWRAVYLTGNASTRIDDYATLRARFGYD- 172 Query: 129 SDSLLLYATVGPDVAQKYETGKAG------------------------------------ 152 + + + + T G + + + G Sbjct: 173 AGNFMPFVTGGFAIGRAQISETIGVQPIEYDQATYKSNQSAARPAYVNYSGYSNFDQTNP 232 Query: 153 -------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NT 196 I G AG G+E ++ +++ R EY+ +++ +G NT Sbjct: 233 GASTPSAPHLLVRSREKIVGGIAAGAGMEF-AMTANILLRAEYQFVQFNDFDGHKANINT 291 Query: 197 ISLGVGMKF 205 + G +KF Sbjct: 292 VRGGAALKF 300 >gi|294851522|ref|ZP_06792195.1| predicted protein [Brucella sp. NVSL 07-0026] gi|294820111|gb|EFG37110.1| predicted protein [Brucella sp. NVSL 07-0026] Length = 87 Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 16/88 (18%) Query: 133 LLYATVGPDVAQKYET----GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 + Y G + G+ + G T G G++ +++++ RLEYR + Y Sbjct: 1 MPYIAGGVAFGGIKNSLRIGGEESSKSKTQTGWTVGAGIDYAA-TDNVLLRLEYRYTDYG 59 Query: 189 KV-----------EGFYNTISLGVGMKF 205 K N I LGV KF Sbjct: 60 KKNFGLNDLDTRGSFKTNDIRLGVAYKF 87 >gi|27379812|ref|NP_771341.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] gi|27352965|dbj|BAC49966.1| blr4701 [Bradyrhizobium japonicum USDA 110] Length = 250 Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 35/179 (19%) Query: 39 PTIATNRYVPIRHDFNGPYAGLS--ALYNGSFGEEAH-------------HNAGGSIFA- 82 P V ++++G Y G + + + + HNA G++ Sbjct: 29 PYTKAPVAVASIYNWSGFYIGGNAGGGSSHNCWDLTAVGVAAIPVTAEGCHNATGALVGG 88 Query: 83 --GYNVEDSCIMYGVEGDVRYTVPVLAD----------NIHSLHGIGGSLRIRGGYEVSD 130 GY + S ++G+E + ++ ++ G + GY + Sbjct: 89 QIGYRWQSSSWVFGLEAQGDWADLKGSNVSAPAALFPLVNNTKIDAIGLFTGQVGYAW-N 147 Query: 131 SLLLYATVGPDVAQKYETG-----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 ++L Y G V +G GGT G G+E G + + +EY Sbjct: 148 NVLWYVKGGAAVTHNKFSGTLAGITLDTANETRWGGTVGTGIEF-GFAPNWSVAVEYNH 205 >gi|148252448|ref|YP_001237033.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. BTAi1] gi|146404621|gb|ABQ33127.1| putative outer-membrane immunogenic protein precursor [Bradyrhizobium sp. BTAi1] Length = 243 Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 57/212 (26%), Gaps = 39/212 (18%) Query: 31 HHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS---------FGEEAHHNAGGSIF 81 G R YV +++ G Y G S G ++ G + Sbjct: 24 DLGARSYPYATKAPAYVAPIYNWTGFYLGAHLGGAFSSDNNFSGLATGNNSNGRFLGGVQ 83 Query: 82 AGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLL 134 G + + + G EG + + GS+ R GY LL Sbjct: 84 VGADWQFAPTWVIGAEGQYSWLSGNVGAAFPGGFVYTNSQRGLGSITGRFGYTW-GPGLL 142 Query: 135 YATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 Y G + E G T G G+E + S A+ EY+ + Sbjct: 143 YVKGGYAYSDNNEKVTLAGNQIGFATNGDHRNGWTVGAGIEY-MFAPSWSAKAEYQYYNF 201 Query: 188 SKV--------------EGFYNTISLGVGMKF 205 +T GV +F Sbjct: 202 GSATFTAPAGLVPTGSFTTDDHTFKAGVNYRF 233 >gi|316936292|ref|YP_004111274.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1] gi|315604006|gb|ADU46541.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1] Length = 561 Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 77/241 (31%), Gaps = 53/241 (21%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ + ++ A AAD G P + P++ ++ G Y G+ Sbjct: 1 MRRILVT---AAALATVISPAAAADMP--------GFPPLMPA---APVQWNWTGLYWGV 46 Query: 61 SALYNG-------------SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVR------ 100 + G A I GYN + ++ + GVE D+ Sbjct: 47 HVGGSFGSSSFSDPAGPGLYGGNVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKG 106 Query: 101 ------YTVPVLADNIHSLHGIGGSLRIRGGYEVSD--SLLLYATVGPDVAQKYETGKAG 152 + ++ N +L R G LLYA G + G Sbjct: 107 TDTCMASSGLFISSNCRVRQDALATLTGRAGLVTGPGGRTLLYAKGGAAFLSERLDITTG 166 Query: 153 -------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE-GFYNTISL--GVG 202 + G T G G+E L+ + +LEY + + + ++ L GVG Sbjct: 167 NPLGNSTDTNDGRWGWTVGAGIE-RALAPAWSVKLEYGYADFGSRDMATPSSFRLVPGVG 225 Query: 203 M 203 Sbjct: 226 Y 226 >gi|220926460|ref|YP_002501762.1| porin [Methylobacterium nodulans ORS 2060] gi|219951067|gb|ACL61459.1| porin [Methylobacterium nodulans ORS 2060] Length = 246 Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 77/230 (33%), Gaps = 48/230 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + + L +A AAD R VP + G YAG+ Sbjct: 2 MRSILRLGALGCACLGP--AALAADLPRH----------AAPPPLPVPPVFTWTGFYAGV 49 Query: 61 SALYNGSFGEEAHHNAGGSIFA--------------GYNVED---SCIMYGVEGDVRYTV 103 +A Y G ++ + + GYN + S + G E D++ T Sbjct: 50 NAGYGFGSGSDSFTDPTYGTISTGGGRDGFVGGGQVGYNYQFTPGSGFVVGAEADIQGTT 109 Query: 104 PVLAD----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153 + ++ G++R R GY V D +L+Y T G A Sbjct: 110 FGRSRTGLVGSAPFYDVGPSLDWFGTVRGRIGYAV-DRILVYGTGGFAYGGGSLPSFAAS 168 Query: 154 ITP-----IAIGGTAGVGVEVGGLSESLVARLE--YRASKYSKVEGFYNT 196 T G AG GVE +++ L ARLE Y + Y+ Sbjct: 169 YTGPLPGTTRTGWAAGGGVEY-AITDRLSARLEGLYVNLDRGHRDTIYDA 217 >gi|319406881|emb|CBI80516.1| putative Hemin binding protein b [Bartonella sp. 1-1C] Length = 379 Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 25/116 (21%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------KYETGKAGEIT---------PI 157 G+ RIR G V ++ Y G A+ K + T I Sbjct: 266 KRKWFGATRIRLGLSV-GRVMPYIAGGVAYAKVQGIFKKSIKIGISKETVPLSSFDSEEI 324 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYS-----KVEGFY---NTISLGVGMKF 205 G T G G + +++ ++ R EYR S + KV+ N +G+ KF Sbjct: 325 MTGYTLGGGFDF-AVTDRILLRAEYRYSDFGAKEFKKVDLKDYNANDFRIGLAYKF 379 Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 23/91 (25%) Query: 48 PIRHDFNGPYAGLSAL---------------------YNGSFGEEAHHNAGGSIFAGYNV 86 + + G Y G + F E GG +AG N Sbjct: 36 APFYSWGGFYFGGQIGSFSSSTTLQYNTLDETKKLNLSSRDFTSEFSGGTGGF-YAGVNF 94 Query: 87 EDSC-IMYGVEGDVRYTVPVLADNIHSLHGI 116 E + GV+ D+ ++ + Sbjct: 95 EYGNRFVLGVDTDIVFSNKQNTKVFSGKDSV 125 >gi|220925103|ref|YP_002500405.1| porin [Methylobacterium nodulans ORS 2060] gi|219949710|gb|ACL60102.1| porin [Methylobacterium nodulans ORS 2060] Length = 287 Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 65/225 (28%), Gaps = 59/225 (26%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + + + SA AAD RR + G YAG Sbjct: 1 MKSLLKS-ATALAGVLVAGSALAADLPRRV---------APPPVFTPVPVFTWTGFYAGF 50 Query: 61 SALYNGSFGEEA---------------------------HHNAGGSIFAGYNVED---SC 90 +A Y S + + G GYN + S Sbjct: 51 NAGYGFSTNDNNTPTVLGVGPATGLVFAPTVIAFQNRNNNDGFVGGGQVGYNYQFTPGSG 110 Query: 91 IMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIRGGYEVSDSLL 133 ++ G+E D ++ N S G++R R GY D L Sbjct: 111 VVIGLEADAQFADFGRNRNRFLATGPIAAQTVFNPAGISGLDWFGTVRGRLGYAF-DRTL 169 Query: 134 LYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177 +YAT G G TAG GVE ++S + Sbjct: 170 VYATGGFAYGSGGGRDFGLPNRDDFQTGWTAGGGVEYALPTDSFL 214 >gi|170741476|ref|YP_001770131.1| porin [Methylobacterium sp. 4-46] gi|168195750|gb|ACA17697.1| porin [Methylobacterium sp. 4-46] Length = 296 Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 65/232 (28%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L + + + SA AAD RRA + G YAG Sbjct: 1 MKSLLKS-ATALAGVVIAGSAMAADLPRRAAPPPVFTP---------VPVFTWTGFYAGF 50 Query: 61 SALY-----------------------------NGSFGEEAHHNAGGSIFAGYNVED--- 88 +A Y G + + G GYN + Sbjct: 51 NAGYGFGTSDNNNSTLIGVNAATGLVPPGTTAVLGFRNRDNNDGFVGGGQVGYNYQFTPG 110 Query: 89 SCIMYGVEGDVRYTV-----------------------PVLADNIHSLHGIGGSLRIRGG 125 + ++ G+E D +Y V N S G++R R G Sbjct: 111 AGVVIGIEADAQYADFGRERNRFSLVTNNPAVTGLAAQQVFNPNGLSGLDYFGTVRGRLG 170 Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 Y +L+ + G T G GVE ++S + Sbjct: 171 YAFDRTLVYATGGFAYGGGGGTSFGLPNRDDFQTGWTVGGGVEYALPTDSFL 222 >gi|170750637|ref|YP_001756897.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170657159|gb|ACB26214.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 278 Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 50/173 (28%), Gaps = 49/173 (28%) Query: 53 FNGPYAGLSALYN------------------------GSFGEEAHHNAGGSIFAGYNVE- 87 + G Y G++A Y SF + G GYN + Sbjct: 42 WTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQI 101 Query: 88 --DSCIMYGVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYE 127 S ++ GVE D +Y N S G++R R GY Sbjct: 102 TPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYA 161 Query: 128 VSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177 D L+Y T G G G G G+E ++S + Sbjct: 162 F-DRTLVYGTGGFAYGSGSADRSFGGYAGNDSFRTGWAVGGGIEYALPTDSFL 213 >gi|146342779|ref|YP_001207827.1| putative outer membrane protein (OMPA-like), hemin-binding protein [Bradyrhizobium sp. ORS278] gi|146195585|emb|CAL79612.1| conserved hypothetical protein; putative outer membrane protein (OMPA-like), hemin-binding protein [Bradyrhizobium sp. ORS278] Length = 266 Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 82/270 (30%), Gaps = 90/270 (33%) Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY------------- 64 AQAAD G T R +++G YAG+ Y Sbjct: 5 VSVAQAADLSDLPILRGSM------TEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTST 58 Query: 65 --------------------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG------- 97 N + G+++ ++G F GYN + ++ GVE Sbjct: 59 MTAAVLANTLIESQMQVSSWNMNLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKF 118 Query: 98 -----------------DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 D Y + ++R R GY + L YA G Sbjct: 119 GGMTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRGRAGYAL-GCFLPYAFFGL 177 Query: 141 DVAQKYE---TGKAGEITPIAI---------------------GGTAGVGVEVGGLSESL 176 + ++ + G +AG+GV+V L L Sbjct: 178 ALGNADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVN-LVGGL 236 Query: 177 VARLEYRASKY-SKVEGFYNTISLGVGMKF 205 AR EY ++ S V+ NT+ G+G KF Sbjct: 237 FARAEYEYIRFTSTVDTSVNTVRAGLGYKF 266 >gi|94497615|ref|ZP_01304184.1| membrane protein [Sphingomonas sp. SKA58] gi|94423032|gb|EAT08064.1| membrane protein [Sphingomonas sp. SKA58] Length = 279 Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 63/226 (27%), Gaps = 68/226 (30%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-----------------GSFGEEAHHNAGGSIFA- 82 + D+ GPY G S YN G + + G + F+ Sbjct: 19 VPAMAQDSGAVDWTGPYVGGSFGYNWQKSDGGEHLRFDTDADGDYNDVVTTTTGANAFSP 78 Query: 83 -----------------------------GYNVEDSCIMYGVEGDVR--YTVPVLAD--- 108 GY+++ + GV + Y + + Sbjct: 79 GTCGGAARGPTPASGCNDDKDAIAWMGHVGYDMQFGSFVAGVVAEAGKAYVDDKVTEFST 138 Query: 109 -----NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI---- 159 + G+LR R GY ++ Y T G A+ Sbjct: 139 TPAFYTMRRKIDWNGNLRARLGYTTPSGIMPYITGGLAYAKVKNNFTTSNGANSFTENNR 198 Query: 160 -----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 G T G GVE +S++ Y ++Y V+ + + G Sbjct: 199 SEDGWGWTMGGGVEA-KVSDNFSIGARYLWTRY-NVDDYRVDVGAG 242 >gi|83953797|ref|ZP_00962518.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1] gi|83841742|gb|EAP80911.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1] Length = 198 Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 71/195 (36%), Gaps = 18/195 (9%) Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSALYNGSFGE 70 + A +A A V P + P + D+ G Y GL Y+ + + Sbjct: 4 ASAAVLASTAFAG-ATYAGSLAEPVVEPVMTAPVPAPDLGGDWTGFYTGLQLGYSDAEVD 62 Query: 71 EAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL---RIRGG 125 G AGYN + + G E D T L D G S+ +I+GG Sbjct: 63 NGLEGDNGSYGFHAGYNYDFGRFVLGGELDYDKTDIDLNDAAGVTQGSIDSVARAKIKGG 122 Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR--LEYR 183 Y++ S L+YAT G A G+ GVG++ + V LE++ Sbjct: 123 YDL-GSTLIYATGGYARAD----TTMGDEDGAFY----GVGMDYKITEQYSVGAELLEHK 173 Query: 184 ASKYSKVEGFYNTIS 198 + S V G ++ Sbjct: 174 FNDVSGVSGNDADVT 188 >gi|170747833|ref|YP_001754093.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170654355|gb|ACB23410.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 276 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 51/171 (29%), Gaps = 47/171 (27%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAG----------------------GSIFAGYNVED-- 88 + G Y G++A Y ++ G G GYN + Sbjct: 42 WTGAYFGINAGYAFDASSNNTNSFGVPAPYGNGTTAFFSQRNQEGFTGGGQVGYNFQFTP 101 Query: 89 -SCIMYGVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEVS 129 S I+ GVE D +Y + N S G++R R GY Sbjct: 102 GSGIVVGVEADAQYLDFGRSRNNAFLVGPLAPGYYVTDPRGLSSLDFFGTVRGRIGYAF- 160 Query: 130 DSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 D +L Y T G G G G G+E ++S + Sbjct: 161 DRVLFYGTGGFAYGSGSADRSFGGFAGNDSFRTGYAVGGGIEYALPTDSFL 211 >gi|312113967|ref|YP_004011563.1| porin [Rhodomicrobium vannielii ATCC 17100] gi|311219096|gb|ADP70464.1| porin [Rhodomicrobium vannielii ATCC 17100] Length = 294 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 57/210 (27%), Gaps = 63/210 (30%) Query: 40 TIATNRYVPIRHDFNGPYAGLSAL---------------YNGSFGEEAHHNAGG----SI 80 + P + G Y G + S + + GG I Sbjct: 30 PASYKDIAPPPPLWTGFYVGAHLGGGWTDFDLGRNSYYYWPTSTTYDRYDYNGGLSGTGI 89 Query: 81 FAG----YNVEDSC---IMYGVEGDVRYTVPVLADNIH-------------------SLH 114 F G YN + +YG+E D+ + I+ + Sbjct: 90 FGGLTIGYNWQFGQCCNYVYGIELDIGGWRDDASKTIYIDDDRRGLDPDASTRIRFTNKG 149 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPD----------------VAQKYETGKAGEITPIA 158 G G + R GY ++ L+YA G Y+ + Sbjct: 150 GFYGDITGRIGYAAGNT-LIYAKGGFAWLNNSFRVGVLRENGATGYNYDWSSTTDNGNTL 208 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYS 188 G T G G+E + + + EY + Sbjct: 209 AGWTVGGGLEY-KWNYNWSVKAEYLYFNFG 237 >gi|15420210|gb|AAK97315.1|AF321116_1 Pap31 [Bartonella henselae phage 60457] Length = 221 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 58/214 (27%), Gaps = 77/214 (35%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------------HNAGGSIFAG 83 +A + G Y G S E G I+AG Sbjct: 9 EVAPTVISAPAFSWTGFYIGGQVGNFSSKVEITDPNKKDKLFSKDDTPKPSGFMGGIYAG 68 Query: 84 YNVEDSC-IMYGVEGDVRYTV--------------------------------------- 103 N++ ++ GVE D + Sbjct: 69 SNMDLGNNMILGVETDAVWADREDAKTFSAGAIGEDKLEKFKASLKNANADVAKDKKIDD 128 Query: 104 ----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAG- 152 D++ G+ R+R G+ +D ++ Y G V+ T A Sbjct: 129 IVKEDKHTDSLALKEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADD 188 Query: 153 ---------EITPIAIGGTAGVGVEVGGLSESLV 177 + T +G T G GV+ ++++++ Sbjct: 189 AEIASAQLFDKTKTLVGFTLGGGVDF-AMTDNVL 221 >gi|85715155|ref|ZP_01046139.1| putative outer membrane protein [Nitrobacter sp. Nb-311A] gi|85698070|gb|EAQ35943.1| putative outer membrane protein [Nitrobacter sp. Nb-311A] Length = 236 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 61/202 (30%), Gaps = 37/202 (18%) Query: 39 PTIATNRYVPIR---HDFNGPYAGLSALYNGSFGEEAHHN-AGGSIFAGYNVED-SCIMY 93 P Y P + +++ G Y G G G + G + + + + Sbjct: 27 PYTKAPTYTPPQQAVYNWTGFYVGGHLGGAFGGGLGGSDGRFLGGVQGGADYQFANQWVL 86 Query: 94 GVEGD----VRYTVPVLADNIHSLHGIG---GSLRIRGGYEVSDSLLLYATVGPD---VA 143 GVE Y V + G GS+ R GY V LLYA G A Sbjct: 87 GVEAQYSWLANYRGDVAFPGGSVVTGGNSGLGSVTGRLGY-VWGPTLLYAKGGYAFRDGA 145 Query: 144 QKYETGKAGEITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSKV-------- 190 A G T G G+E + + A+ EY+ + K Sbjct: 146 LGVTNAAGVPQAFTATGNRDSGYTVGAGLEY-MFAPNWSAKAEYQYYNFGKTTFGAGSPA 204 Query: 191 -------EGFYNTISLGVGMKF 205 +T+ GV +F Sbjct: 205 DVVGASFRNDEHTVKAGVNYRF 226 >gi|170738855|ref|YP_001767510.1| porin [Methylobacterium sp. 4-46] gi|168193129|gb|ACA15076.1| porin [Methylobacterium sp. 4-46] Length = 279 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 58/214 (27%), Gaps = 63/214 (29%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY--- 64 + + LA+A A AAD RR VP + G G + Y Sbjct: 6 LSSALLAIAVAGPACAADLPRRVQPPSFTPVP----------VFTWTGFSVGGNVGYAFT 55 Query: 65 -----------------------NGSFGEEAHHNAGGSIFAGYNVED---SCIMYGVEGD 98 F + G + G N + S ++ GVE D Sbjct: 56 TRESRNRNAAFLIDDRAIGTVGGTFGFSNRGQNGFTGGLQVGANYQMTPGSGVVVGVEAD 115 Query: 99 VRY--------------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138 +Y + G+ R R GY D L+YAT Sbjct: 116 AQYLDAGRRRSGVLAGPNTVLNPNAIFFDPRATAGLEYFGTARGRLGYAF-DRTLVYATG 174 Query: 139 GPDVAQKYETGKAG--EITPIAIGGTAGVGVEVG 170 G G + + G T G GVE Sbjct: 175 GFAYGGGSARRFFGATDNAQMRTGWTVG-GVEYA 207 >gi|87118661|ref|ZP_01074560.1| putative outer-membrane immunogenic protein precursor [Marinomonas sp. MED121] gi|87118664|ref|ZP_01074563.1| putative outer-membrane immunogenic protein precursor [Marinomonas sp. MED121] gi|86166295|gb|EAQ67561.1| putative outer-membrane immunogenic protein precursor [Marinomonas sp. MED121] gi|86166298|gb|EAQ67564.1| putative outer-membrane immunogenic protein precursor [Marinomonas sp. MED121] Length = 258 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 61/206 (29%) Query: 52 DFNGPYAGLSAL-------------YNGSFGEEAH-----------------HNAGGSIF 81 ++ G Y G++ Y+G F + ++ GS+ Sbjct: 29 NWEGLYTGIAIGISSSTASPSTEVEYSGYFNDNSNGSDRDQLDPILQREIEGDTTSGSLL 88 Query: 82 AGYNVEDSCIMYGVEGDV--------------RYTVPVLADN----IHSLHGIGGSLRIR 123 GY+ + +YG+E D+ Y A N SLR + Sbjct: 89 LGYHFQKGKFVYGLEADLTFAEFSESESEGPTDYDTTAGASNFTTVTEIKTDYMFSLRPK 148 Query: 124 GGYEVSDSLLLYATVGPDVA-----------QKYETGKAGEITPIAIGGTAGVGVEVGGL 172 GY V D+ L++ + GP ++ + E ++G +A +G++ + Sbjct: 149 VGY-VKDNFLMHISAGPVISEFTTTHSYTDTHGSGASLSFEDKDSSVGLSANIGIDYL-I 206 Query: 173 SESLVARLEYRASKYSKVEGFYNTIS 198 S L R +Y +S + ++ Sbjct: 207 SNGLSIRADYTYLHFSDILDGSGDVN 232 >gi|170738817|ref|YP_001767472.1| porin [Methylobacterium sp. 4-46] gi|168193091|gb|ACA15038.1| porin [Methylobacterium sp. 4-46] Length = 302 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 50/203 (24%), Gaps = 62/203 (30%) Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYN---------------------------- 65 R V P + + G YAG +A Y Sbjct: 24 PRRVAPPVIAPV---PVFTWTGFYAGFNAGYGFDASSTNPDVIVLTRDPRVVAGPAGSAL 80 Query: 66 --GSFGEEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIHS-------- 112 G G+ G GYN + + ++ G+E D +Y N S Sbjct: 81 AIGWTGDRNTEGFSGGGQIGYNYQFTPGAGVVVGIEADAQYVDFGRNRNAFSFAIPNQPG 140 Query: 113 ------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154 G++R R GY L Sbjct: 141 AQFNGANGLRLFDPRGLSGLDYFGTVRGRLGYAFDRVLFYGTGGFAYGGGGGTNFGLPNT 200 Query: 155 TPIAIGGTAGVGVEVGGLSESLV 177 G TAG G+E ++S + Sbjct: 201 DDFQTGWTAGGGIEYALPTDSFL 223 >gi|27382516|ref|NP_774045.1| hypothetical protein bll7405 [Bradyrhizobium japonicum USDA 110] gi|27355688|dbj|BAC52670.1| bll7405 [Bradyrhizobium japonicum USDA 110] Length = 298 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 90/310 (29%), Gaps = 117/310 (37%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L+L V S +A AAD G T+ H ++G Y G+ Sbjct: 1 MRRLWLVAAV----FGSVSAAHAADMPDLPVLRGGF------TDGLSKTSHRWDGAYVGV 50 Query: 61 SALYNGSFGEEAHH------------------------------NAGGSIFAGYNVEDSC 90 + Y + + + F G N + Sbjct: 51 NGGYTADATDFSQSVVGLTNFIFRDSVLQQPTANWSLMNKTNTQSTNFGAFVGRNWQWYD 110 Query: 91 IMYGVEGDVRY--TVPVLADNIHSLHGIGG-----------------------------S 119 + G+EG Y + L +SL + + Sbjct: 111 AILGLEGTYSYFNNLSTLTSGTNSLTIVNPPGDAHAANVTDNYDVTLTGTAAAKVKDMIT 170 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETG------------------------------ 149 LR R G++ D + YA +G V + + Sbjct: 171 LRGRVGWDGGD-FMPYAFMGAAVGRMDVSRSVTSIVDLRQDVTNTIVVGGATLTTTTFGA 229 Query: 150 ----KAGEITPI-------AIGGTAGVGVEVGGLSESLVARLEYRASKYS---KVEGFYN 195 A + A+G TAG+GVE + + L AR+EY K+S N Sbjct: 230 PQAVPAQSQSQTQRRTNAFAVGWTAGLGVEYC-IWDGLFARVEYEYVKFSPVMNTSVTLN 288 Query: 196 TISLGVGMKF 205 +G+G KF Sbjct: 289 NARVGLGYKF 298 >gi|83951536|ref|ZP_00960268.1| possible outer membrane protein [Roseovarius nubinhibens ISM] gi|83836542|gb|EAP75839.1| possible outer membrane protein [Roseovarius nubinhibens ISM] Length = 221 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 13/148 (8%) Query: 52 DFNGPYAGLSALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109 D+ G Y G Y S G + G I AGY+ + + G D + L Sbjct: 72 DWTGFYGGAQLGYGDVSSNGALNGDDVIGGISAGYDYDLGSWVLGGGLDYDFADINLGGG 131 Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 + + LR GY+V + L+Y T G A +T G G G G E Sbjct: 132 TNLENVFRAKLRA--GYKVGNG-LIYGTGGYAQA---DTNTTGSED----GYFVGAGYE- 180 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTI 197 +S+++ E ++ V G + Sbjct: 181 HMVSQNISVGGEALYHEFENVGGTTTDV 208 >gi|323138620|ref|ZP_08073687.1| porin [Methylocystis sp. ATCC 49242] gi|322396108|gb|EFX98642.1| porin [Methylocystis sp. ATCC 49242] Length = 305 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 48/161 (29%), Gaps = 41/161 (25%) Query: 71 EAHHNAGGSIFAGYNVEDS-CIMYGVEGDV----RYTVPVLADNIHSLHGIG-------- 117 G GYN + + G+E D+ I + G Sbjct: 96 TNTSGFIGGGQIGYNWQFGGSFLAGIEADIQGVAGSNSNSTVTTIATGAGFPANPTMTTM 155 Query: 118 ---------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA----------------- 151 G++R R G+ + +LL+Y T G Sbjct: 156 TASRRLDYIGTVRGRLGWLFTPTLLVYGTGGLAYGGVTSNVSLVGAETPAAGPNNGVWFS 215 Query: 152 -GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 G + +G TAG GVE + + A++EY +V Sbjct: 216 NGAFSDTRVGWTAGGGVEWMFM-PNWSAKVEYLYYDLGRVT 255 >gi|15420182|gb|AAK97313.1|AF308171_1 Pap31 [Bartonella quintana phage] Length = 228 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 70/240 (29%), Gaps = 87/240 (36%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72 +AL S +AQAAD + A + G Y G G+F + Sbjct: 2 IALISASAAQAADVIATHE----------AAPVITTPNFSWTGFYIGGQI---GNFTSDN 48 Query: 73 H-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV--------- 103 G I+AG N++ ++ GVE D + Sbjct: 49 KIKGLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWADCEATKTSAI 108 Query: 104 -----------------------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLL 134 ++D+ G+ R R G+ D ++ Sbjct: 109 RTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIGFSAFDRVMP 168 Query: 135 YATVGPDVAQ---------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 Y G A+ K G + T + +G T GV+V ++ +++ R Sbjct: 169 YFAGGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMMVGFTVSGGVDV-AMTGNVLLR 227 >gi|220923245|ref|YP_002498547.1| porin [Methylobacterium nodulans ORS 2060] gi|219947852|gb|ACL58244.1| porin [Methylobacterium nodulans ORS 2060] Length = 285 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 52/173 (30%), Gaps = 49/173 (28%) Query: 53 FNGPYAGLSALYNGSFGEEA---------------------------HHNAGGSIFAGYN 85 + G YAG +A Y S + + G GYN Sbjct: 41 WTGFYAGFNAGYGFSTNDNNTPTVLGVGPATGLVFAPTVIAFQNRNNNDGFVGGGQVGYN 100 Query: 86 VED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIRGG 125 + S ++ G+E D ++ N S G++R R G Sbjct: 101 YQFTPGSGVVIGLEADAQFADFGRNRNRFLATGPIAAQTVFNPAGISGLDWFGTVRGRLG 160 Query: 126 YEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177 Y D L+YAT G G TAG GVE ++S + Sbjct: 161 YAF-DRTLVYATGGFAYGSGGGRDFGLPNRDDFQTGWTAGGGVEYALPTDSFL 212 >gi|170742457|ref|YP_001771112.1| porin [Methylobacterium sp. 4-46] gi|168196731|gb|ACA18678.1| porin [Methylobacterium sp. 4-46] Length = 294 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 48/180 (26%), Gaps = 55/180 (30%) Query: 53 FNGPYAGLSALY-----------------------------NGSFGEEAHHNAGGSIFAG 83 + G YAG +A Y G + + G G Sbjct: 41 WTGFYAGFNAGYGFGTSDNNNSTLIGVNAATGLVPPGTTAVLGFRNRDNNDGFVGGGQVG 100 Query: 84 YNVED---SCIMYGVEGDVRYTV-----------------------PVLADNIHSLHGIG 117 YN + + + G+E D +Y V N S Sbjct: 101 YNYQFTPGAGFVIGIEADAQYADFGRERNRFSLVTNNPAVTGLAAQQVFNPNGLSGLDYF 160 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 G++R R GY +L+ + G T G GVE ++S + Sbjct: 161 GTVRGRLGYAFDRTLVYATGGFAYGGGGGTSFGLPNRDDFQTGWTVGGGVEYALPTDSFL 220 >gi|75675529|ref|YP_317950.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255] gi|74420399|gb|ABA04598.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255] Length = 241 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 61/202 (30%), Gaps = 36/202 (17%) Query: 38 VPTIATNRYVPIR--HDFNGPYAGLSALYNGSFGEEAHHN-AGGSIFAGYNVED-SCIMY 93 T A Y P + +++ G Y G G + G + + + + Sbjct: 27 PYTKAPVPYTPPQAVYNWTGFYIGGHLGGAFGGDLGGSDGRFLGGVQGGADYQFANNWVL 86 Query: 94 GVEGD----VRYTVPVLADNIHSLHGIG---GSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 G+E Y V + G GS+ R GY LLYA G Sbjct: 87 GIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSVTGRLGYSW-GPTLLYAKGGYAFRDGA 145 Query: 147 --ETGKAGEITPI------AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV-------- 190 T AG G T G G+E + + A+ EY+ + + Sbjct: 146 LGVTDAAGAPQAFTTTGNRNSGYTVGAGLEY-MFAPNWSAKAEYQYFNFGRTTFGAGSPA 204 Query: 191 -------EGFYNTISLGVGMKF 205 +T+ GV +F Sbjct: 205 DVVGASFRNDEHTVKAGVNYRF 226 >gi|89052836|ref|YP_508287.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1] gi|88862385|gb|ABD53262.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1] Length = 206 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 24/191 (12%) Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH--------HNAGGSIFAGY 84 GG + HD+ G YAG + + +FAGY Sbjct: 20 GGVVDPAPLDPVIISQPDHDWTGFYAGAQLDLVANAETTLEPFGQLMSFNGELAGLFAGY 79 Query: 85 NVEDSCIMYGVEGDV---RYTVPVLADNI---HSLHGIGGSLRI--RGGYEVSDSLLLYA 136 + I+ G E D Y V +A NI + LR GY++ D L YA Sbjct: 80 RYDFGDIVLGGEIDYMRGTYDVDEIAPNILLLSPEVDVE-LLRAGIEVGYDLGD-FLPYA 137 Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE-GFYN 195 T G + G GE + G AG+G + +SE++ E ++ + G + Sbjct: 138 TAGYA-HLTLDYGGFGEDSG--DGWFAGIGADYR-VSENVTVGAELLHHQFEFNDFGLQH 193 Query: 196 TI-SLGVGMKF 205 + ++G+ + F Sbjct: 194 ELTTVGINVAF 204 >gi|192293155|ref|YP_001993760.1| outer membrane insertion C-terminal signal [Rhodopseudomonas palustris TIE-1] gi|192286904|gb|ACF03285.1| outer membrane insertion C-terminal signal [Rhodopseudomonas palustris TIE-1] Length = 263 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 77/259 (29%), Gaps = 82/259 (31%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----------- 67 +A AAD G P ++ G Y G Y S Sbjct: 15 QTAYAADMPDYGPLRG--------ALVETPRVINWEGFYVGGQGGYGTSDMDFSNSTSGI 66 Query: 68 ---------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD-------- 98 G+ + H G FAGYN + ++ GVE + Sbjct: 67 ASNLLVNTVIENQMSVSSWPVLGKASSHGQGWGAFAGYNAQWDDVVLGVEANYMHGSFGG 126 Query: 99 ---------VRYTVPVLADNIHSLHGIG----GSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + Y S I GS R+R GY S L YA +G + Q Sbjct: 127 GATGSMGRQIDYNNVNYRAIYTSSAAINVNDIGSARLRAGYAF-GSFLPYAFIGASLGQA 185 Query: 146 YETGKAG------------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 A + G G+G++V L L R E+ K+ Sbjct: 186 DIVRTATITGTQGGVPFTPLSATQVQNGHFIYGYAGGLGMDV-MLYRGLFLRAEWEYLKF 244 Query: 188 SK-VEGFYNTISLGVGMKF 205 + ++ +T+ G+G KF Sbjct: 245 AAPIDTSVSTVRAGLGYKF 263 >gi|146340935|ref|YP_001205983.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] gi|146193741|emb|CAL77758.1| putative outer-membrane protein; putative secreted protein [Bradyrhizobium sp. ORS278] Length = 242 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 58/172 (33%), Gaps = 28/172 (16%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF---------GEEAHHNAGGSI--FAGYNVE 87 P + +D++G Y G++ Y S E H+ GG++ GY + Sbjct: 29 PYTKAPPAIVAINDWSGFYLGINGGYGSSRNCWTLVNGPAEGCHNATGGTVGGQFGYRWQ 88 Query: 88 DSCIMYGVEGDVRYTVPVLA--------DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 +++G+E + D + G + GY D+ LLYA G Sbjct: 89 MGQVVFGLEAQGNWADLTGNNVTPVFAPDRNRTKLTAFGLFTGQIGYSFGDT-LLYAKGG 147 Query: 140 PDVAQKYETGKAGEITPIAI-------GGTAGVGVEVGGLSESLVARLEYRA 184 V +G I + G + G GVE + S EY Sbjct: 148 AAVTDTRYEIFSGVINTVLAATTVHKWGASVGAGVEY-AFAPSWSVGFEYDH 198 >gi|118581633|ref|YP_902883.1| OmpA domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504343|gb|ABL00826.1| OmpA domain protein transmembrane region-containing protein [Pelobacter propionicus DSM 2379] Length = 230 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 64/204 (31%), Gaps = 41/204 (20%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGE--------EAHHNAGGSIFAG-------- 83 + + H++ G YAG++ Y + +A H+ G + G Sbjct: 17 AVPSLAADNAPHNWTGFYAGINGGYGWGETQWDYVGSTGKADHHINGGLIGGTMGANLQF 76 Query: 84 --YNVEDSCIMYGVEGDVRYTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLL 134 Y ++ GVE D + S ++R R G D L + Sbjct: 77 FAYQGGIPAVVGGVESDFDWADLGDDGPCPNPRFRAKSSIDALATVRGRLGLAF-DRLFI 135 Query: 135 YATVGPDVAQKYET-------------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 + T G VA+ G GVG E + ++L ++E Sbjct: 136 FGTGGLAVAKTDVETVDTWGTSVPPSGTAKNGEGKWKTGYVVGVGAEY-AVWKNLSFKVE 194 Query: 182 YRASKYSKVE-GFYNTISLGVGMK 204 Y+ + N I + G++ Sbjct: 195 YQYYDLGRSTYRVDNDIPVKAGVR 218 >gi|323139376|ref|ZP_08074427.1| porin [Methylocystis sp. ATCC 49242] gi|322395369|gb|EFX97919.1| porin [Methylocystis sp. ATCC 49242] Length = 293 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 59/224 (26%), Gaps = 70/224 (31%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH---------------------- 74 +P+ +P + G Y GL+A S Sbjct: 19 DLPSSKGPATLPPPPLWTGFYLGLNAGGAWSDNNSVQTATFPIFDAIPAGYGTTSAILGT 78 Query: 75 --------NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIG-------- 117 G GY+ + + GVE D++ + + Sbjct: 79 FSAPANASGFIGGGQIGYDYQFGGAFVAGVEADIQGVASSDGSSSVAGAAFNPVVLGGST 138 Query: 118 --------------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------------- 149 G+ R R GY V+ +LL++ + G Sbjct: 139 ASQLATVGKSLDYLGTARGRLGYLVTPTLLVFGSSGLAYGGVSANTSIFQSYTPVAGATN 198 Query: 150 --KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 +G + G TAG G+E + + A+ EY V Sbjct: 199 IFASGSYSGARAGWTAGGGLEWMFV-PNWSAKAEYLYYDLGNVT 241 >gi|84499800|ref|ZP_00998088.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597] gi|84392944|gb|EAQ05155.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597] Length = 194 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 73/201 (36%), Gaps = 22/201 (10%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M ++ + S++ + + SA A +A P D++GPY G Sbjct: 1 MSRIKTFIIGSAVVVTAGASAAYAGSPTQAQPEPVVAQPVTPVVAGT----DWSGPYYGA 56 Query: 61 SALY-NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119 S + + G + F GY+ + + G E ++Y + D + G Sbjct: 57 SLGFGSWDLGGASGEGRNEGAFLGYDYDFGNYVAGGE--LQY---IGNDVTVGGTALNGM 111 Query: 120 LR--IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 R + GY+ + +LLY T G A G AGVG++ + Sbjct: 112 ARLKGKLGYD-AGPVLLYGTAGYAWADSSAGDGD--------GYVAGVGMDYQ-FDNGVA 161 Query: 178 ARLEYRASKYSKVEGFYNTIS 198 EY +++S NT++ Sbjct: 162 VGAEYLYNEFSDFANTGNTLT 182 >gi|307294323|ref|ZP_07574167.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1] gi|306880474|gb|EFN11691.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1] Length = 217 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 80/232 (34%), Gaps = 42/232 (18%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ A ++ A+AS AQ +P + +D G AG Sbjct: 1 MRKILAATLLTGAAVASPALAQEPNPTFTGPR------------VEAILGYDRTG--AGS 46 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS-------- 112 S + +++ + AGY+V + GVEG+ + + + Sbjct: 47 SVDNDNDRDDQSIDGLLYGVGAGYDVNLGSAVIGVEGEYTDSTAKSSRTDFTDQFGFGRV 106 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIAI---GGTAGVGVE 168 G + R G S + L+Y G + G + T G G GVE Sbjct: 107 KQGRDLYVGARAGILASPNTLVYVKGGYTNTKLDVLAGDTNQETDTNFKLDGWRIGGGVE 166 Query: 169 VGGLSESLVARLEYRASKYSK---------------VEGFYNTISLGVGMKF 205 ++ + A+LEYR SKY ++ + + VG +F Sbjct: 167 -RAINANSFAKLEYRYSKYEDAHIDFANGASSDEFGIDTDRHQVVASVGWRF 217 >gi|148255737|ref|YP_001240322.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146407910|gb|ABQ36416.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] Length = 251 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 69/229 (30%), Gaps = 46/229 (20%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL-- 63 L +G ++ A AAD R + +D++G Y G +A Sbjct: 4 LLLGATTSLALGIAPAIAADLPARTFTK---------APAMIATIYDWSGFYLGFNAGGG 54 Query: 64 -----------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106 N +A G GY + ++GVEG + Sbjct: 55 SARTCWTNQVTIAGVAATNAEGCHDATGALAGG-QVGYRWQTGGWVFGVEGQGNWANLKG 113 Query: 107 ADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------KA 151 + G+ G L + GY +++L Y G V + +G Sbjct: 114 RNASQLAPGVTNQTKINGVGLLTGQIGYAW-NNVLWYVKGGAAVTGEKYSGLATATGTPF 172 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 + + G G GVEV G + + EY ++ + G Sbjct: 173 DQASATRWGAAVGTGVEV-GFANNWSIAAEYEHLFMGNRTLTFSGVPGG 220 >gi|319403669|emb|CBI77254.1| Hemin binding protein E [Bartonella rochalimae ATCC BAA-1498] Length = 306 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 19/110 (17%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--------GKAGEITPIAIGGTAG 164 G+ R+R G+ +D ++ Y G + +T + +G T G Sbjct: 199 KEKWAGATRVRIGFA-ADRIMPYIAAGVSYTELQDTLSVLVSRRNAEVDEEKKMVGYTFG 257 Query: 165 VGVEVGGLSESLVARLEYRASKYSKV---------EGFYNTISLGVGMKF 205 G ++ +++S + R EYR S + K N +GV KF Sbjct: 258 GGFDI-AIAKSFIMRTEYRYSDFGKKKFAKGEVELSYKTNDFRVGVAYKF 306 >gi|323139111|ref|ZP_08074169.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC 49242] gi|322395675|gb|EFX98218.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC 49242] Length = 837 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 54/203 (26%), Gaps = 65/203 (32%) Query: 52 DFNGPYAGLSALYNGSFGEEAHH-----------------------------NAGGSIFA 82 + Y GL+ G++ A + G + Sbjct: 592 SWTDVYVGLNGG--GAWSSPASNVQVVGVGPAPASLPVAFSAAPIDTGNHLAGFIGGLQL 649 Query: 83 GYNVE-DSCIMYGVEGDV----RYTVPVLADNIHSLHG--------------IGGSLRIR 123 G N + GVE D+ T + G G++R R Sbjct: 650 GANWNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLNYLGTVRGR 709 Query: 124 GGYEVSDSLLLYATVGPDVAQKYETG-------KAGEITP-------IAIGGTAGVGVEV 169 GY + +L++Y T G T +G +AG GVE Sbjct: 710 LGYLATPTLVVYGTGGMAYGGVVSNTAIFTRRIGGTSQTQVNPVFQDTLVGWSAGGGVEW 769 Query: 170 GGLSESLVARLEYRASKYSKVEG 192 L + A+++Y Sbjct: 770 MFL-PNWSAKVDYLHYDLGNARA 791 >gi|84515617|ref|ZP_01002979.1| possible outer membrane protein [Loktanella vestfoldensis SKA53] gi|84510900|gb|EAQ07355.1| possible outer membrane protein [Loktanella vestfoldensis SKA53] Length = 205 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 5/138 (3%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 +++ A F A V PT + D+ G YAG Y G Sbjct: 10 TAMLAAPFAVAAGMSAAGGMAQPVETVAPTPVAPAPMMASTDWTGFYAGGQLGYADVTGS 69 Query: 71 EAHHNAGG---SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYE 127 + G + GY + ++ G E D + L I ++ R GY+ Sbjct: 70 GTTADVDGAIYGVHGGYMYDLGSVVLGGEVDYDLSSIDNVAGTADLDDIM-RVKARVGYD 128 Query: 128 VSDSLLLYATVGPDVAQK 145 + + L Y T G A Sbjct: 129 -AGAFLPYVTGGVVRANT 145 >gi|294011267|ref|YP_003544727.1| putative outer membrane protein [Sphingobium japonicum UT26S] gi|292674597|dbj|BAI96115.1| putative outer membrane protein [Sphingobium japonicum UT26S] Length = 217 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 69/201 (34%), Gaps = 27/201 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M K+ A ++ A++S AQ +P + +D G AG Sbjct: 1 MHKILAATLLTGAAVSSPALAQDVNPTFTGPR------------VEAILGYDHTG--AGS 46 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI--------HS 112 S + +++ + AGY+V + GVEG+ + + Sbjct: 47 SVDNDNDRDDQSIDGLLYGVGAGYDVNLGSAVVGVEGEFTDSTAKSGRSDPTDQFGFGRV 106 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE---TGKAGEITPIAI-GGTAGVGVE 168 G + R G S + L+Y G + T + G G GVE Sbjct: 107 KQGRDLYVGARAGILASPNTLVYVKGGYTNTKLDVLAGNTNVETDTNFKLDGWRIGAGVE 166 Query: 169 VGGLSESLVARLEYRASKYSK 189 ++ + A+LEYR SKY Sbjct: 167 -RAINANTFAKLEYRYSKYED 186 >gi|323139008|ref|ZP_08074068.1| porin [Methylocystis sp. ATCC 49242] gi|322395762|gb|EFX98303.1| porin [Methylocystis sp. ATCC 49242] Length = 300 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 71/262 (27%), Gaps = 84/262 (32%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ V V + L + SA AAD R + G Y GL Sbjct: 1 MKTRHFCVVVMTAVLMT-ASAVAADLPSRKDDPLPAPP-----------PPMWTGFYVGL 48 Query: 61 SALYNGSFGEEAHH---------NAGGSIFAG-----------------------YNVE- 87 +A S A+ G + YN Sbjct: 49 NAGGTWSNSNSANVASAPFWTLPGLNGDVLGASAISASAYNPANAGGFIGGGQIGYNWRI 108 Query: 88 DSCIMYGVEGDVRYTVPVLADNIHSLH----------------------GIGGSLRIRGG 125 + G+E D++ + G++R R G Sbjct: 109 AGSFVTGIEADIQGIAGNGGAGSSANVAAIAGALVPSHVATVVGTSKSLDYLGTVRSRIG 168 Query: 126 YEVSDSLLLYATVGPDVAQKYET----------------GKAGEITPIAIGGTAGVGVEV 169 Y + +LL+Y T G + G G + +G TAG G+E Sbjct: 169 YLATPTLLIYGTGGLAYGGVSSSATISQSASFIDTAVPWGSTGAFSDTRVGWTAGGGIEW 228 Query: 170 GGLSESLVARLEYRASKYSKVE 191 +S + A++EY V Sbjct: 229 MFMS-NWSAKVEYLYYDLGSVT 249 >gi|170749780|ref|YP_001756040.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170656302|gb|ACB25357.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 46/137 (33%), Gaps = 28/137 (20%) Query: 68 FGEEAHHNAGGSIFAGYNVE---DSCIMYGVEGDVRY-----------------TVPVLA 107 + ++ G GYN + S + G E D +Y + Sbjct: 94 YSNDSREGFSGGGQIGYNWQLTPGSGAVIGFEADAQYLDFGRRARFATNAAAINPGFIPV 153 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAIG 160 + + G++R R GY D L+YAT G A+ AG G Sbjct: 154 NGTLNTIDFFGTVRGRLGYAF-DRTLVYATGGFAYATGTDDGARVGLQNFAGRRNDFKTG 212 Query: 161 GTAGVGVEVGGLSESLV 177 T G GVE ++S + Sbjct: 213 WTVGGGVEYALPTDSFL 229 >gi|39937872|ref|NP_950148.1| hypothetical protein RPA4814 [Rhodopseudomonas palustris CGA009] gi|39651732|emb|CAE30254.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 561 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 71/221 (32%), Gaps = 48/221 (21%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYN 65 + V V++LA A AAD R P + P+ ++ G Y G + Sbjct: 4 ILVTVATLATV-ISPAAAADMPR---------FPPLMPV--APVSWNWTGLYWGAHVGGS 51 Query: 66 G-------------SFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRY---------- 101 G A I GYN + ++ + GVE D+ Sbjct: 52 FGSSSFSDPAGPGLYGGSVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKGTNTCM 111 Query: 102 --TVPVLADNIHSLHGIGGSLRIRGGYEVSD--SLLLYATVGPD-------VAQKYETGK 150 + ++ N +L R G+ LLYA G +A Y G Sbjct: 112 ASSGLFISSNCRVRQDALATLTGRAGFVTGPGGRTLLYAKGGAAYLSERLDIAVGYPLGN 171 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 G T G G+E L+ + +LEY + + + Sbjct: 172 LTAANDGRWGWTVGAGIE-RALAPAWSVKLEYNYADFGSRD 211 >gi|218532905|ref|YP_002423721.1| porin [Methylobacterium chloromethanicum CM4] gi|218525208|gb|ACK85793.1| porin [Methylobacterium chloromethanicum CM4] Length = 274 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 73/250 (29%), Gaps = 74/250 (29%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + G++ + L+ +A AAD RRA +P + G Y G Sbjct: 1 MRNSLILSGLAGILLSG--TALAADLPRRAEAPVFTPIP----------VFAWTGAYFGT 48 Query: 61 SALYNGSFGEEA------------------------HHNAGGSIFAGYNVE---DSCIMY 93 + Y + + AGYN + + ++ Sbjct: 49 NGGYAYTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGAGFVF 108 Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 G E D +Y VL + + G++R R GY D +L+Y T Sbjct: 109 GFETDAQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAF-DRVLVYGT 167 Query: 138 VGPDVAQKYE---------TGKAGEITPIAIGGTAGVGVEVGGLSES---------LVAR 179 G AG + + G G G+E + S + + Sbjct: 168 GGFAYGTTTLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVK 227 Query: 180 LEYRASKYSK 189 EY Sbjct: 228 AEYLRYDLGS 237 >gi|91978859|ref|YP_571518.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5] gi|91685315|gb|ABE41617.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5] Length = 559 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 42/192 (21%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG---------------SIF 81 +P + P+ ++ G Y G GSFG + + G I Sbjct: 22 DLPRLPPA--APVLWNWTGLYWGAHLG--GSFGASSFSDPAGPGIYGGNVRSPAAMAGIQ 77 Query: 82 AGYNVE-DSCIMYGVEGDVR------------YTVPVLADNIHSLHGIGGSLRIRGGYEV 128 GYN + ++ + GVE D+ + V++ N ++ R G Sbjct: 78 LGYNYQPNANWLVGVEADLSALNGNGTNSCMVSSGLVISANCRVRQDAMATVTGRAGLVT 137 Query: 129 SD--SLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEVGGLSESLVAR 179 LLYA G + G + + G TAG G+E L+ + + Sbjct: 138 GPGGRTLLYAKGGAAFLSERIDITVGNPLRSSTDNSDGRWGWTAGAGIE-QALAPAWSVK 196 Query: 180 LEYRASKYSKVE 191 EY + + + Sbjct: 197 FEYDYANFGSSD 208 >gi|254560231|ref|YP_003067326.1| outer-membrane immunogenic protein [Methylobacterium extorquens DM4] gi|254267509|emb|CAX23351.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens DM4] Length = 289 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 69/228 (30%), Gaps = 63/228 (27%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + G++ + L+ +A AAD RRA + G YAG Sbjct: 1 MRNSLILAGLTGILLSG--TALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGF 49 Query: 61 SALYNGSFGEE-----------------------------AHHNAGGSIFAGYNVED--- 88 +A Y ++ ++ G GYN + Sbjct: 50 NAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPG 109 Query: 89 SCIMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131 S ++ GVE D +Y V S G++R R GY D Sbjct: 110 SGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DR 168 Query: 132 LLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 L+Y T G G G AG G+E ++S + Sbjct: 169 TLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 216 >gi|115524922|ref|YP_781833.1| hypothetical protein RPE_2916 [Rhodopseudomonas palustris BisA53] gi|115518869|gb|ABJ06853.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 578 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 65/247 (26%), Gaps = 77/247 (31%) Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALY---------------------------- 64 G V A+ + P+ + G Y G Sbjct: 324 GDVTPVAAAASVKAPPVAVHWTGAYVGGHLGAGFGPKHWSDPLGSSMALVDPGPPDYAVG 383 Query: 65 -------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 G G + GYNV+ + G E + + I+S G G Sbjct: 384 TPRGLNMAGFGKSTPMAGGLGGLQIGYNVQIDNTVLGFEVEAALADLKGSHTIYSGIGGG 443 Query: 118 ---------GSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGK------------AGEI 154 G+ R GY + D L+Y G V + Sbjct: 444 QAEAHTKALGTFAGRLGYAL-DRSLIYVKAGGAWAVTDHTLNTSSVYGNVQGLDCCGDTV 502 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-----------------VEGFYNTI 197 + G G G+E ++ + A EY + ++ ++T+ Sbjct: 503 SSSRFGWVVGAGIEY-AVNRTWSATFEYDYMDFGTQSIRFPTNAGLGLPPAAIDQAFHTV 561 Query: 198 SLGVGMK 204 +GV K Sbjct: 562 KMGVNYK 568 >gi|163850612|ref|YP_001638655.1| porin [Methylobacterium extorquens PA1] gi|218529335|ref|YP_002420151.1| porin [Methylobacterium chloromethanicum CM4] gi|240137660|ref|YP_002962131.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens AM1] gi|163662217|gb|ABY29584.1| porin [Methylobacterium extorquens PA1] gi|218521638|gb|ACK82223.1| porin [Methylobacterium chloromethanicum CM4] gi|240007628|gb|ACS38854.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens AM1] Length = 289 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 69/228 (30%), Gaps = 63/228 (27%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + G++ + L+ +A AAD RRA + G YAG Sbjct: 1 MRNSLILAGLTGILLSG--TALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGF 49 Query: 61 SALYNGSFGEE-----------------------------AHHNAGGSIFAGYNVED--- 88 +A Y ++ ++ G GYN + Sbjct: 50 NAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPG 109 Query: 89 SCIMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131 S ++ GVE D +Y V S G++R R GY D Sbjct: 110 SGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DR 168 Query: 132 LLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 L+Y T G G G AG G+E ++S + Sbjct: 169 TLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 216 >gi|163854231|ref|YP_001642274.1| porin [Methylobacterium extorquens PA1] gi|163665836|gb|ABY33203.1| porin [Methylobacterium extorquens PA1] Length = 313 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 85/321 (26%), Gaps = 124/321 (38%) Query: 1 MQKLFLAVG-VSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59 M+ + + ++ L A AAD G P A D++G Y G Sbjct: 1 MRTTTMRIATLALLTTVLVSPALAADLDYGVLRGYDDDYPAPA------PIIDWSGFYVG 54 Query: 60 LSALYNG--------------------------------SFGEEAHHNAGGSIFAGYNVE 87 Y+ SF + H FA YN++ Sbjct: 55 GHGGYSSASMGFTNVFSKPYSQYFRARDIETEFGISSLLSFASQRVHGITYGAFASYNIQ 114 Query: 88 DSCIMYGVEGDV------RYTVPVLADNIHSLHGI----------------GGSLRIRGG 125 ++G+E D + ++ + + + + G++R R G Sbjct: 115 LDDAVFGIEVDYTSFSKSGMSYSEISRFVTTKNNMFETVNLRGFSRTELEDFGTIRGRAG 174 Query: 126 YEVSDSLLLYATVGPDVAQ--------------------KYETGKAGEITPIAIGGTAG- 164 Y S L + T G + + Y+T G G Sbjct: 175 YAF-GSFLPFVTAGLAIGRATILDQPEVQNYGYDATAAAAYQTNPKAGAPVTHHGYANGN 233 Query: 165 -------------------------------------VGVEVGGLSESLVARLEYRASKY 187 G+E ++ + + R EY+ + Sbjct: 234 TAFDPSAPQDPQKSIPDGFYQIPAKPKSKAMAGVALGAGLEY-AITPNFLLRGEYQYVLF 292 Query: 188 SKVEGFY---NTISLGVGMKF 205 +G NT+ G +KF Sbjct: 293 DDFDGHKINVNTVRGGAAIKF 313 >gi|260460927|ref|ZP_05809177.1| porin [Mesorhizobium opportunistum WSM2075] gi|259033504|gb|EEW34765.1| porin [Mesorhizobium opportunistum WSM2075] Length = 255 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 41/188 (21%) Query: 49 IRHDFNGPYAGLSALY-------------NGSFG-----------EEAHHNAGGSIFAGY 84 +D++G Y G NG F + G I AG Sbjct: 36 SAYDWSGFYVGGHIGVADGDITATDMTEPNGGFFTELVPAGTEGFDFNKAGVAGGIHAGA 95 Query: 85 NVEDSCIMYGVEGDVRYTVPVL---------ADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 + + G E T +D ++ R GY D +L+Y Sbjct: 96 QWQWGQFVLGGEATWTATGIRKTITSPYYPDSDTETGKISNYATIVGRVGYAF-DRVLIY 154 Query: 136 ATVGPDVA----QKYETGKAGE--ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 A G + + G G G++ L+ +L ++Y Sbjct: 155 AKAGYAGGKVDFRARDNDALVSYEKNEWQNGYALGAGIDY-ALTNNLSLGVDYTHIDLGH 213 Query: 190 VEGFYNTI 197 + + Sbjct: 214 KTSTGDNV 221 >gi|188582250|ref|YP_001925695.1| porin [Methylobacterium populi BJ001] gi|179345748|gb|ACB81160.1| porin [Methylobacterium populi BJ001] Length = 290 Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 66/224 (29%), Gaps = 61/224 (27%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 FL G + +A SA AAD RRA + G YAG +A Y Sbjct: 4 FLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGFNAGY 54 Query: 65 NGSFGEE-----------------------------AHHNAGGSIFAGYNVED---SCIM 92 ++ ++ G GYN + S ++ Sbjct: 55 GFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVV 114 Query: 93 YGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 G+E D +Y V S G++R R GY D L+Y Sbjct: 115 IGIEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DRTLVY 173 Query: 136 ATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 T G G G AG G+E ++S + Sbjct: 174 GTGGFAYGSGGGREFGTGVSSDDFQTGWAAGGGIEYALPTDSFL 217 >gi|148257935|ref|YP_001242520.1| hypothetical protein BBta_6718 [Bradyrhizobium sp. BTAi1] gi|146410108|gb|ABQ38614.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 550 Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 13/131 (9%) Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG------SLRIRGGYE 127 + G + G + + + G++ + + + + + +R GY Sbjct: 381 GDVIGGVQLGCDYQIDRFVLGIQAMADLGIINASTAVAPQLTLNARTSNLYTATVRAGYL 440 Query: 128 VSDSLLLYATVGPDVAQKYET----GKAGEITPIAI--GGTAGVGVEVGGLSESLVARLE 181 V+ +LLYA G + T + G T G GVE + + A E Sbjct: 441 VTPEVLLYARGGAAWTRTSVTAVNAANGQSASAAFNRSGWTVGAGVE-WMFARNWSAFAE 499 Query: 182 YRASKYSKVEG 192 Y + + V G Sbjct: 500 YDYADFGTVTG 510 >gi|156739544|gb|ABU93432.1| Omp25 [Brucella abortus] Length = 49 Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 + ++ Y T G +Q + + +G TAG G+E L+++++ Sbjct: 3 NPVMPYLTAGIAGSQIKLNNGLDDESKFRVGWTAGAGLEA-KLTDNIL 49 >gi|148254831|ref|YP_001239416.1| hypothetical protein BBta_3415 [Bradyrhizobium sp. BTAi1] gi|146407004|gb|ABQ35510.1| putative outer membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 680 Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 74/239 (30%), Gaps = 69/239 (28%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+++ L V SLALA AA + GP+ G Sbjct: 4 MKRIGLTSAVLSLALAIPGPTDAA-----------------PIRSAEADIQAWTGPFLGG 46 Query: 61 SALYNGSFGEEAHHNAGG-----------------------SIFAGYNVEDSC-IMYGVE 96 Y G + NA + AGYN ++ GVE Sbjct: 47 HFGYVGGASSWSASNAVTTVSGSTGVFNSYDVFKGTGSYLFGLQAGYNWTLPSRLVLGVE 106 Query: 97 GDVRYTVPVLADNIHSLHGIG-----------GSLRIRGGYEVSDSLLLYATVG------ 139 DV V + + G G+ R R GY D LLYAT G Sbjct: 107 ADVSTPNTVAGERTVTSASAGTASYRETVLAMGTARARLGYAF-DHWLLYATGGFAWSYD 165 Query: 140 ------PDVAQKYETGKAGEITPIA---IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + AG + +G AG+G E+ ++ A+ E+ AS++ Sbjct: 166 RLERTQLAGLPLVGSAVAGTVDTALTWRLGWVAGLGAELP-IAPHWTAKAEFLASEFGS 223 >gi|170748188|ref|YP_001754448.1| putative outer membrane protein [Methylobacterium radiotolerans JCM 2831] gi|170654710|gb|ACB23765.1| putative outer membrane protein [Methylobacterium radiotolerans JCM 2831] Length = 571 Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 67/224 (29%), Gaps = 65/224 (29%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-------------- 64 +A AAD RR +P AT + G +AGL A Y Sbjct: 16 QTAMAADLPRR-------ALPPAATAV---PIFSWTGAHAGLFAGYGTLDRATQFVCTGP 65 Query: 65 NGSFG----------EEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSL 113 +G G + + G GY+ + + + G D ++T D Sbjct: 66 DGQPGARNCPVIPSKRASDGSFVGGAEVGYDWQVNSGFVAGAAADYQFTRLWGYDRREGA 125 Query: 114 HGIGG-------------------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-- 152 G +LR R G+ V D L+YAT G Sbjct: 126 FPAAGGGFYRRSVAHSGQRLDELATLRGRIGFAV-DRTLVYATGGLAAGTVRTDNNLSLA 184 Query: 153 -------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + +G AG G+E SE L A++E Sbjct: 185 GFPLFDRRQGAVRLGYVAGAGIE-HAFSEHLSAKVEGLYYDLGS 227 >gi|114798934|ref|YP_759743.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444] gi|114739108|gb|ABI77233.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444] Length = 292 Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 67/237 (28%), Gaps = 54/237 (22%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL--- 60 L A + + F + A P + RG+V + + G +G Sbjct: 23 LSTAAAPGAYSWTGFYAGVHAGPTWQDRSAERGLVTGSVAPDFDYDANLNEGGPSGGVAE 82 Query: 61 ----SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN------- 109 +A++ FG G + AGYN + G E D D+ Sbjct: 83 GSPLAAIFPSEFGSSEKVGMSGGVQAGYNQQYGRFALGFEADFTGLGSNGGDDGAVQGLT 142 Query: 110 ----------------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY------- 146 + S + R+R G V+D L+Y T G V Sbjct: 143 ASNPAFGDAVFGTDLRVRSSMDYLATTRLRAGV-VTDRFLVYGTGGAAVGNPEHQVDFSA 201 Query: 147 ---------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 +G G TAG G E ++++ + EY Sbjct: 202 GLTATGGTLVGPLDRSNSFSGRKDDWKGGWTAGAGGEF-AFTDNMTLKAEYLYYDLG 257 >gi|163853964|ref|YP_001642007.1| porin [Methylobacterium extorquens PA1] gi|240141418|ref|YP_002965898.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens AM1] gi|163665569|gb|ABY32936.1| porin [Methylobacterium extorquens PA1] gi|240011395|gb|ACS42621.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens AM1] Length = 274 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 81/265 (30%), Gaps = 75/265 (28%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + G++ + L+ +A AAD RRA +P + G Y G Sbjct: 1 MRNSLILSGLAGILLSG--TALAADLPRRAEAPVFTPIP----------VFAWTGAYFGP 48 Query: 61 SALYNGSFGEEA------------------------HHNAGGSIFAGYNVE---DSCIMY 93 + Y + + AGYN + + ++ Sbjct: 49 NGGYAYTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVF 108 Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 G E D +Y VL + + G++R R GY D +L+Y T Sbjct: 109 GFETDAQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAF-DRVLVYGT 167 Query: 138 VGPDVAQKYETGK---------AGEITPIAIGGTAGVGVEVGGLSES---------LVAR 179 G AG + + G G G+E + S + + Sbjct: 168 GGFAYGTTTLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVK 227 Query: 180 LEY-RASKYSKVEGFYNTISLGVGM 203 EY R S+ +T GVG Sbjct: 228 AEYLRYDLGSRTVLIRSTGGPGVGY 252 >gi|319403868|emb|CBI77454.1| putative Hemin binding protein b [Bartonella rochalimae ATCC BAA-1498] Length = 356 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 27/118 (22%) Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPD------VAQKYETGKAGEIT----------- 155 G+ R+R G + ++ Y G ++ K A + T Sbjct: 241 KRKWLGATRMRLGLS-AGRVMPYIAGGIAYAKVQFISSKTVNIGASKNTVPMSSLDSAEV 299 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYS-----KVEGFY---NTISLGVGMKF 205 + +G T G G + +++ ++ R EYR S + KV+ Y N +G+ KF Sbjct: 300 EVMVGYTLGGGFDF-AMTDRILLRAEYRYSDFGAEKFKKVDLKYYKVNDFRIGLAYKF 356 Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 21/95 (22%) Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAG-------------------GSIFAGYNVE 87 + ++G Y G S H+N G +AG N E Sbjct: 20 ASPFYSWDGFYLGGQVGSFSSSMSLLHNNTDKTDERNFKDVFSSEVSGITGGFYAGVNFE 79 Query: 88 -DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 + + GV+ D+ ++ A+ + +R Sbjct: 80 YSNRFVLGVDTDIVFS-NKKAEKVFVDEKFENLVR 113 >gi|159044248|ref|YP_001533042.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12] gi|157912008|gb|ABV93441.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12] Length = 198 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 67/191 (35%), Gaps = 19/191 (9%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 F V +L LA F + A + + P D+ G Y G Y Sbjct: 6 FSPVVALALPLALFGAPSLAGSLEDPVVEPVPMAPAPVVV----SGRDWTGGYVGAQIGY 61 Query: 65 NGSFGEEA---HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 + G + AGY+ + + G + Y + + SL + L+ Sbjct: 62 GDVGTNASGVDGDGLIGGLIAGYDYDFGSYVLG--AGIDYDIADIDLGPASLEDVL-RLK 118 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 +R G+E + L+YAT G A G G AG GVE LS++L E Sbjct: 119 LRAGFE-AGPSLIYATGGYARAGT---DNLGSDD----GWFAGAGVEYP-LSQNLSLAGE 169 Query: 182 YRASKYSKVEG 192 ++ +G Sbjct: 170 VLYHEFDDFDG 180 >gi|163852300|ref|YP_001640343.1| porin [Methylobacterium extorquens PA1] gi|218531058|ref|YP_002421874.1| porin [Methylobacterium chloromethanicum CM4] gi|240139636|ref|YP_002964112.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens AM1] gi|254562046|ref|YP_003069141.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium extorquens DM4] gi|163663905|gb|ABY31272.1| porin [Methylobacterium extorquens PA1] gi|218523361|gb|ACK83946.1| porin [Methylobacterium chloromethanicum CM4] gi|240009609|gb|ACS40835.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens AM1] gi|254269324|emb|CAX25290.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens DM4] Length = 290 Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 66/224 (29%), Gaps = 61/224 (27%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 FL G + +A SA AAD RRA + G YAG +A Y Sbjct: 4 FLRAGTAIAGIAFAGSALAADLPRRAAPPPVFQP---------VPVFTWTGFYAGFNAGY 54 Query: 65 NGSFGEE-----------------------------AHHNAGGSIFAGYNVED---SCIM 92 ++ ++ G GYN + S ++ Sbjct: 55 GFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIGYNYQFTPGSGVV 114 Query: 93 YGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 GVE D +Y V S G++R R GY D L+Y Sbjct: 115 IGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGRLGYAF-DRTLVY 173 Query: 136 ATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 T G G G AG G+E ++S + Sbjct: 174 GTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 217 >gi|254563933|ref|YP_003071028.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium extorquens DM4] gi|254271211|emb|CAX27223.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens DM4] Length = 274 Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 81/265 (30%), Gaps = 75/265 (28%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + G++ + L+ +A AAD RRA +P + G Y G Sbjct: 1 MRNSLILSGLAGILLSG--TALAADLPRRAEALVFTPIP----------VFAWTGAYFGP 48 Query: 61 SALYNGSFGEEA------------------------HHNAGGSIFAGYNVE---DSCIMY 93 + Y + + AGYN + + ++ Sbjct: 49 NGGYAYTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVF 108 Query: 94 GVEGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 G E D +Y VL + + G++R R GY D +L+Y T Sbjct: 109 GFETDAQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAF-DRVLVYGT 167 Query: 138 VGPDVAQKYETGK---------AGEITPIAIGGTAGVGVEVGGLSES---------LVAR 179 G AG + + G G G+E + S + + Sbjct: 168 GGFAYGTTTLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVK 227 Query: 180 LEY-RASKYSKVEGFYNTISLGVGM 203 EY R S+ +T GVG Sbjct: 228 AEYLRYDLGSRTVLIRSTGGPGVGY 252 >gi|89070001|ref|ZP_01157333.1| possible outer membrane protein [Oceanicola granulosus HTCC2516] gi|89044449|gb|EAR50580.1| possible outer membrane protein [Oceanicola granulosus HTCC2516] Length = 200 Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 11/162 (6%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG---YNVEDSCIMYGV 95 P A D++G Y G+ Y + G+ G+++ G Y + I+ G Sbjct: 34 PAPAPAPVTMATRDWSGAYGGVQLGYGQTDGDVFAEEEEGALYGGFVGYQRDFGSIVAGA 93 Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 E D T + D + ++R GY+ + + L YAT G +A +A Sbjct: 94 ELDYLGT-DITNDATGTDIDSLARAKLRVGYD-AGNFLPYATGGYAMANTSGGLEADAD- 150 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197 G GVG + +++ + E +++ +G + Sbjct: 151 ----GYFYGVGADY-MVTDRIAVGGEITKNEFEDFDGSGDDF 187 >gi|188584563|ref|YP_001928008.1| outer membrane insertion C-terminal signal [Methylobacterium populi BJ001] gi|179348061|gb|ACB83473.1| outer membrane insertion C-terminal signal [Methylobacterium populi BJ001] Length = 299 Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 76/311 (24%), Gaps = 118/311 (37%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ LA+ S LA AAD G A D++G Y G Sbjct: 1 MRFATLALLTSVLA----TPVLAADLDYGVLRGSDDDYLPPA------PVVDWSGFYVGG 50 Query: 61 SALYNG---SFGEE-----------------------------AHHNAGGSIFAGYNVED 88 Y+ FG ++AG N + Sbjct: 51 HGGYSSAALGFGNAFQSIVANALRYTAAEEEMKASQFLAARGIHASGTSYGVYAGVNYQF 110 Query: 89 SCIMYGVEGDVRY----------------------TVPVLADNIHSLHGIGGSLRIRGGY 126 ++ G+E D Y LA + G++R R GY Sbjct: 111 DDVVVGLEADYTYFGKTGAAFDQITRVMTTANGYRNTVALAGEASTEIEDYGTIRGRIGY 170 Query: 127 EVSDSLLLYATVGPDVAQKYETGKAG---------------------------------- 152 + L + T G V + Sbjct: 171 GFGN-FLPFVTGGLAVGRAVVNDTVAIQNYAYDEAAYKANQTGGPTTYVNHFGYQIFDQK 229 Query: 153 ---------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRA---SKYSKVEGFY 194 G G G+E ++ + + R EY+ + + + Sbjct: 230 SPPGSIPDYPTVHGITKKVTVTGVALGGGLEY-AITPNFLLRGEYQYVLFNDFQGHKAEL 288 Query: 195 NTISLGVGMKF 205 NT+ G +KF Sbjct: 289 NTVRGGAAIKF 299 >gi|255264827|ref|ZP_05344169.1| conserved hypothetical protein [Thalassiobium sp. R2A62] gi|255107162|gb|EET49836.1| conserved hypothetical protein [Thalassiobium sp. R2A62] Length = 203 Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 10/163 (6%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG--- 59 + S+L L + + A + V Y D+ G YAG Sbjct: 1 MMKFVSVTSALVLGATTPSFAGTLEQAEIDPMVETVTMAPAPTY---GRDWTGGYAGIQL 57 Query: 60 --LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 + + A + AGY + + G E D T + + + Sbjct: 58 GLGQVDVDPDGADLNGDGALYGVHAGYMYDLGRYVLGGELDYDLT-EIESTELAGKVDSV 116 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 L+ R GY+ + ++L Y T G +T G G Sbjct: 117 LRLKGRVGYD-AGAILPYMTAGFAQTDASDTALGGVDDGYFFG 158 >gi|296447726|ref|ZP_06889642.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium OB3b] gi|296254758|gb|EFH01869.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium OB3b] Length = 840 Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 30/139 (21%) Query: 75 NAGGSIFAGYNVEDSCIMYGVEGDV----RYTVPVLADNIHSLH----------GIGGSL 120 G + AG N + + ++ G+E D+ T I G++ Sbjct: 652 GFIGGLQAGINQQAAGVLMGLEADLHGVSGNTDTRWRMGIKDAISTYASRTTTLNYLGTI 711 Query: 121 RIRGGYEVSDSLLLYATVGPDVA--------------QKYETGKAGEITPIAIGGTAGVG 166 R R GY + +L +Y T G + +G T G G Sbjct: 712 RGRLGYLATPTLAIYGTGGLAYGGVISAGIISSQRVNGGALSFNFPAFQDSLLGWTVGAG 771 Query: 167 VEVGGLSESLVARLEY-RA 184 VE LS +++Y R Sbjct: 772 VE-WALSPDWSVKIDYLRY 789 >gi|323138506|ref|ZP_08073575.1| porin [Methylocystis sp. ATCC 49242] gi|322396302|gb|EFX98834.1| porin [Methylocystis sp. ATCC 49242] Length = 300 Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 52/208 (25%), Gaps = 68/208 (32%) Query: 52 DFNGPYAGLSALYNGSFGEEAH-------------------------------HNAGGSI 80 + G Y GL+A A+ G Sbjct: 40 TWTGFYVGLNAGGTWGQSNSANLSSFALFNDPLWFQGNAFASSAWGAVPTSNASGFIGGG 99 Query: 81 FAGYNVED-SCIMYGVEGDVRYTVPVLADNIHSLHGIG--------------------GS 119 GYN + + GVE D++ + + G+ Sbjct: 100 QIGYNWQFGGSFLTGVEADIQGIAASSGRSSVTGVAFNALTGAMAMTTTDVSKRLDYLGT 159 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETG---------------KAGEITPIAIGGTAG 164 +R R GY V+ +LL Y T G + +G TAG Sbjct: 160 VRGRLGYLVTPTLLAYGTGGLAYGGVGLNASQFSFDTGAFFGAGIGNTTFSNTLVGWTAG 219 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEG 192 GVE + A+ EY Sbjct: 220 GGVEWMFM-PGWSAKGEYLYYDLGSTTN 246 >gi|146278175|ref|YP_001168334.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC 17025] gi|145556416|gb|ABP71029.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC 17025] Length = 197 Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 68/194 (35%), Gaps = 20/194 (10%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA---HHNA 76 A A P+ A +V + V D++G Y G Y E + + A Sbjct: 16 PAFAGGPITVAP---EPIVEPMPAPVVVAPVTDWSGFYVGGQLGYGDVGTEISGLDGNGA 72 Query: 77 GGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYA 136 G + AGY + + G E + Y + + + +L++ G ++ LLYA Sbjct: 73 IGGVHAGYRYDFGRAVVGAE--IAYDMTNIDIGDSAELDNVATLKLMAGGKI-GRGLLYA 129 Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA-----RLEYRASKYSKVE 191 T G A + G G+G + L++ R E+ + + Sbjct: 130 TAGGTWADVTSDAGDPDD-----GYVYGIGYDY-MLNDRWSVGAELLRHEWDTFDDAGTD 183 Query: 192 GFYNTISLGVGMKF 205 T+ VG +F Sbjct: 184 ADATTLQAKVGFRF 197 >gi|254485896|ref|ZP_05099101.1| outer membrane protein, putative [Roseobacter sp. GAI101] gi|214042765|gb|EEB83403.1| outer membrane protein, putative [Roseobacter sp. GAI101] Length = 198 Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 22/200 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++ + +A ++F + A + + P N D+ G Y GL Sbjct: 1 MKRTMKFATAALVASSAFAGSAFAGSLSEPVVEPVMMEPVPVVNT----GGDWTGFYTGL 56 Query: 61 SALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG 118 Y + G G AGYN + + G E D T L + ++ + Sbjct: 57 QLGYADADGPGNLDGDNGSYGFHAGYNYDFGRFVAGAELDYDKTDIDLNNGAATIDSV-A 115 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG----TAGVGVEVGGLSE 174 +++GGY+ + +LYAT G A + G I + T VG E+ Sbjct: 116 RAKVKGGYDFGN-YMLYATGGYAQADTTLGDEDGAFYGIGMTYRVSETYSVGAEL----- 169 Query: 175 SLVARLEYRASKYSKVEGFY 194 LE+R S V G Sbjct: 170 -----LEHRFSDVGGVSGSD 184 >gi|220921616|ref|YP_002496917.1| porin [Methylobacterium nodulans ORS 2060] gi|219946222|gb|ACL56614.1| porin [Methylobacterium nodulans ORS 2060] Length = 285 Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 48/175 (27%), Gaps = 49/175 (28%) Query: 51 HDFNGPYAGLSALYNGSFGEEAH---------------------------HNAGGSIFAG 83 + G YAG +A Y G G Sbjct: 39 FTWTGFYAGFNAGYGFDVSSNNGPTVLGVGPATGLVFAPTVIAFRNQNNLDGFVGGGQVG 98 Query: 84 YNVED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRIR 123 YN + + + G+E D ++ N + G++R R Sbjct: 99 YNYQFTPGAGFVIGLEADAQFADFGRNRNRFIATGPIAAQTVFNPAGIAGLDWFGTVRGR 158 Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSESLV 177 GY V D +L Y T G G TAG GVE ++S + Sbjct: 159 LGYAV-DRVLFYGTGGFAYGGGGGRDFGLPNDDDFQTGWTAGGGVEYALPTDSFL 212 >gi|163736518|ref|ZP_02143937.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis BS107] gi|161390388|gb|EDQ14738.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis BS107] Length = 194 Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 54/174 (31%), Gaps = 18/174 (10%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + V ++++A A A A + PT D+ G Y G Sbjct: 1 MTRIVSMAAIAAALSTPAFAGNL----EEPVVAPAPTAPPVVVANDGGDWTGAYIGGQIG 56 Query: 64 YNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 + + + + AGYN + + G E D T L + + +R Sbjct: 57 QLDADTSNGLSGDDVSYGVHAGYNYDFGRFVLGGEIDYDATDVDLGGGAAT---VDSVMR 113 Query: 122 IRG--GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG------GTAGVGV 167 + GY+ +L Y T G + GE I + T G V Sbjct: 114 GKVKAGYDF-GPVLAYVTGGVAQVDTSVGDETGEFYGIGVAYRVTDQWTVGGEV 166 >gi|39937375|ref|NP_949651.1| hypothetical protein RPA4315 [Rhodopseudomonas palustris CGA009] gi|39651233|emb|CAE29756.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 275 Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 76/258 (29%), Gaps = 81/258 (31%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----------- 67 +A AAD G P ++ G Y G Y S Sbjct: 28 QTAYAADMPDYGPLRG--------ALVETPRVINWEGFYVGGQGGYGTSDMDFTNSTQGI 79 Query: 68 ---------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV------- 99 G+ + H G F GYN + ++ G+E + Sbjct: 80 VSNLLVNTAVQGALGVSSWPVLGKSSSHGQGWGGFVGYNAQWDDVVLGIEANYMHGNFGG 139 Query: 100 ----RYTVPVLADNIHSLHGIG----------GSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + + ++ G GS R+R GY S L YA G + Q Sbjct: 140 STSGSMARQISSGGVNYGAIYGASAGINVHDVGSARLRAGYAF-GSFLPYAFGGVALGQA 198 Query: 146 YETGKAG-----------------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 A + + G + GVG++ L L R E+ K++ Sbjct: 199 DIVQSASVIGTDAGGTWVLSGSQVQNSHFIYGYSGGVGMD-MMLYRGLFVRAEWEYQKFA 257 Query: 189 K-VEGFYNTISLGVGMKF 205 + +T+ G+G KF Sbjct: 258 APINTAVSTVRGGIGYKF 275 >gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3] gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3] Length = 326 Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 13/171 (7%) Query: 47 VPIRHDFNGPYAGLSALYNGS-------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 ++ N Y G A ++ + + + G +F GY+ D + G + Sbjct: 19 QAAENNTNNFYIGAKAGWSKYQDACLYGYTKCEEDSLGYGLFVGYDFTDWFAIEGGVTNH 78 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIA 158 + I L + GY ++D++ LY VG G+ + + Sbjct: 79 NEVNSSYQNYDVEALAISSDLSTKFGYRLTDNVQLYTKVGISYQHINKTMSDLGDFSGSS 138 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA----SKYSKVEGFYNTISLGVGMKF 205 GG +G++ L + R EY+ + ++ + S+G+ +F Sbjct: 139 FGGLVAMGIDY-KLDNNWSLRGEYQFIDGIGDDTSLKADLHFTSVGIKYRF 188 >gi|296447762|ref|ZP_06889677.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b] gi|296254739|gb|EFH01851.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b] Length = 732 Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 51/173 (29%), Gaps = 32/173 (18%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRY-TVPVLADNI 110 +G +H AG SI A GY+ I+YGVE D Y + A + Sbjct: 59 SGGRLEGFGADAFGLAAPSHDRAGASIGAQIGYDWRKGEIVYGVETDFNYLGLRRAATGL 118 Query: 111 HSLHGIGG----------------SLRIRGGYEVSDSLLLYATVGPDVAQ---------- 144 + G SLR R G L+Y T G Sbjct: 119 FAAPSSFGLGGYALTADESSNSFMSLRGRLGRAY-GPWLVYGTGGVAAGGWRGASNLARL 177 Query: 145 -KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 A + G GV+ L + ARLEY + Y T Sbjct: 178 PSLALYSAPLSQSSRMKYAIGAGVQ-RALGDHWSARLEYLYLNQQSQKQLYET 229 >gi|319784137|ref|YP_004143613.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170025|gb|ADV13563.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 255 Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 41/188 (21%) Query: 49 IRHDFNGPYAGLSALY-------------NGSFGEE-----------AHHNAGGSIFAGY 84 +D++G Y G NG F + G I AG Sbjct: 36 SAYDWSGLYVGGHLGVANGDITATDMTEPNGGFFTDLVPAGTEGFDFNKAGVAGGIHAGA 95 Query: 85 NVEDSCIMYGVEGDVRYTVPVL---------ADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 + + G E T +D + ++ R GY D +L+Y Sbjct: 96 QWQWGQFILGGEATWTATGIRKTITSPYFPDSDTETAKISNYATVVGRVGYAF-DRVLIY 154 Query: 136 ATVGPDVAQKYETGKAGE------ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 A G + + + G G G++ L+ +L ++Y Sbjct: 155 AKAGYAGGKVDFRARDNDALVTYEKNEWQNGYALGAGIDY-ALTNNLSLGVDYTHVDLGH 213 Query: 190 VEGFYNTI 197 + + Sbjct: 214 KTSTGDNV 221 >gi|260459523|ref|ZP_05807778.1| outer membrane protein-like protein [Mesorhizobium opportunistum WSM2075] gi|259035077|gb|EEW36333.1| outer membrane protein-like protein [Mesorhizobium opportunistum WSM2075] Length = 436 Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 39/200 (19%) Query: 44 NRYVPIRHDFNGPYAGLSALYNGS--------FGEEAHHNAGG-SIFA----GYNVEDSC 90 + +++ G Y G S G + GG F GY+ + Sbjct: 237 AAFETPAYNWTGFYIGGGLGAGASVHQIEIPPLGGAKFNGLGGEGAFGELNVGYDQDFGS 296 Query: 91 IMYGVEGDVRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD---V 142 + GV D RY+ + +I+ G + R G ++++S L YA G Sbjct: 297 WVAGVMVDARYSGMTSKLDLGVGSINVDTDYGFDVLGRVGMKMNESTLAYALAGYSWQHF 356 Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG---------- 192 + G + G G+E +S ++ LEYR S++++ + Sbjct: 357 DLNASDPVGDIADWGSSGFSVGAGLET-AVSSNMTIGLEYRYSQFAEKDLSFLLGSGAPD 415 Query: 193 -------FYNTISLGVGMKF 205 ++T+ LG KF Sbjct: 416 GLVTTTPSFHTVRLGAKYKF 435 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 62/201 (30%), Gaps = 38/201 (18%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSF 68 VS AL +A AAD V+ G +++G Y G + Sbjct: 14 AVSVFAL--MSAAHAADVVQPVEASG----------------FNWSGLYVGFGVGAGANV 55 Query: 69 GEEAHH------------NAGGSIFAGYNVE-DSCIMYGV-----EGDVRYTVPVLADNI 110 + G + AGY+ + G GD++ + + Sbjct: 56 HKLGSDFIPISLNGIGGEGVYGELTAGYDYMVSPRFLLGGLLDVHVGDIKTKIDAAGFDA 115 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEV 169 G +R GY + + L Y G + AG G G G+E Sbjct: 116 SIQETYGFDAGLRVGYLFTPNTLGYVLGGYSWQKYKLDSNAGFGFDWDQSGYFVGGGIET 175 Query: 170 GGLSESLVARLEYRASKYSKV 190 ++ + + EYR +++ Sbjct: 176 -AINSNWTIKTEYRYTRFGTK 195 >gi|310639322|ref|YP_003944081.1| outer membrane protein [Ketogulonicigenium vulgare Y25] gi|308752898|gb|ADO44042.1| outer membrane protein [Ketogulonicigenium vulgare Y25] Length = 261 Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 30/224 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAG 59 + + + +A+F ++ +A + P + + P + G Y G Sbjct: 17 LSTFKWISIMRYICIAAFLASTSAIAANAGGLSTPVMEPPVIMVQPTPMPAPSWQGAYVG 76 Query: 60 LSALY---------------NGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEGDV-- 99 + Y G+ + A G +I GY+ + + ++G+ G+ Sbjct: 77 ANVNYGDLSVDSTGVLETALQGAGFDTTVATADGVNYAIRGGYDWQFNNWLFGLGGEYSF 136 Query: 100 -RYTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151 Y + D +I + +R GY S S Y VG A T Sbjct: 137 GSYDGGLSGDLVTALGTDIDLSIDSVATAYLRAGYAFSQSTAAYLLVGYTWATAEATLGG 196 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 + + G+GVE + + EY + + + + Sbjct: 197 TTYSEDYEAASYGLGVE-HRFNRAWSVYGEYVYTDFGDINPTND 239 >gi|289209494|ref|YP_003461560.1| OmpA domain protein transmembrane region-containing protein [Thioalkalivibrio sp. K90mix] gi|288945125|gb|ADC72824.1| OmpA domain protein transmembrane region-containing protein [Thioalkalivibrio sp. K90mix] Length = 215 Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 62/191 (32%), Gaps = 36/191 (18%) Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHNAGG-----------SIFAGYNVEDSCIMY-GVE- 96 F+G Y G + G + + GG + G+ +Y GVE Sbjct: 26 ASPFHGSYVGGQLGWVGYDIDYREADDGGISGLSASGLTGGVMTGWGTVLDNGLYLGVEF 85 Query: 97 ----GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------KY 146 D TV + + + R G V+DS+LLY G ++ + Sbjct: 86 DAQTEDADLTVRIDDAELGVDSKYSYGITGRLGTTVNDSVLLYGLAGYQRSRFDYRLTET 145 Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV------------EGFY 194 + + G GVGVE L L R EY + Y + Sbjct: 146 DEDLSLRFKDSINGARIGVGVEYQ-LDNRLFMRAEYSYTFYESERYRIEDEFTLRFDPDA 204 Query: 195 NTISLGVGMKF 205 +LG+G +F Sbjct: 205 QRFTLGLGYRF 215 >gi|192293657|ref|YP_001994262.1| hypothetical protein Rpal_5301 [Rhodopseudomonas palustris TIE-1] gi|192287406|gb|ACF03787.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 561 Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 63/191 (32%), Gaps = 37/191 (19%) Query: 37 VVPTIATNRYV-PIRHDFNGPYAGLSALYNG-------------SFGEEAHHNAGGSIFA 82 +P V P+ ++ G Y G + G A I Sbjct: 22 DMPRFPPLMPVAPVSWNWTGLYWGAHVGGSFGSSSFSDPAGPALYGGSVRSPAALAGIQI 81 Query: 83 GYNVE-DSCIMYGVEGDVRY------------TVPVLADNIHSLHGIGGSLRIRGGYEVS 129 GYN + ++ + GVE D+ + ++ N +L R G+ Sbjct: 82 GYNYQPNANWLIGVEADLSSMNAKGTNTCMASSGLFISSNCRVRQDALATLTGRAGFVAG 141 Query: 130 D--SLLLYATVGPD-------VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 LLYA G +A Y G + ++ G T G G+E L+ + +L Sbjct: 142 PGGRTLLYAKGGAAFLSERLDIAVGYPLGNSTDVNDGRWGWTVGAGIE-RALAPAWSVKL 200 Query: 181 EYRASKYSKVE 191 EY + + + Sbjct: 201 EYNYADFGSRD 211 >gi|296445959|ref|ZP_06887909.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] gi|296256477|gb|EFH03554.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] Length = 292 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 36/172 (20%) Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSL 113 GP SA G GYN + + G+E D++ + +S Sbjct: 74 GPNLATSAALATGSYPSDDARFLGGGQIGYNFQASPSFVLGLEADIQGVAGSRSTAKNSG 133 Query: 114 HGIG--------------------GSLRIRGGYEVSDSLLLYATVGPDVAQKYET----- 148 GI G++R R G+ + +LLLYAT G + T Sbjct: 134 LGIPAGFLGVVASDTTTTKRLDYLGTMRGRVGFLAAPTLLLYATGGLAYGEVGSTVTIGQ 193 Query: 149 ---------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 G G + + +G TAG G+E L+ +LEY V Sbjct: 194 ANLPFAPSFGSFGGYSDLRVGWTAGGGLEWL-LAPKWSVKLEYLYYDLGSVT 244 >gi|85374383|ref|YP_458445.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594] gi|84787466|gb|ABC63648.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594] Length = 223 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 81/233 (34%), Gaps = 45/233 (19%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 +A+ ++ A+A+ A A + G V ++ AG S Sbjct: 4 AVALILAGTAMATASPALAQTVQNDSPFTGAR----------VQAVTGYDNIKAGSSVDD 53 Query: 65 NGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYT--VPVLADNIHSLHGIGGS 119 +G+ + G I+ GY+V+ ++ G E + ++ + G G Sbjct: 54 DGNPNNDQSAE--GVIYGAAVGYDVDLGPVVIGPEAEFAWSTADTDFDNGDFEGFGFGNV 111 Query: 120 -------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG----EITPIAIGGTAGVGVE 168 L R G ++ D L Y G A+ G + G G G+E Sbjct: 112 SADRDLYLGARVGAKIGDQALAYVKGGYTNAKLNIRSNDGTTKFDTDYDLDGYRVGGGLE 171 Query: 169 VGGLSESLVARLEYRASKYS----------------KVEGFYNTISLGVGMKF 205 ++ ++ EYR S YS V+ + +S+G+G++F Sbjct: 172 Y-AINRNMFVNAEYRYSNYSRAEVDFDGTLPDSDRFDVDLDRHQVSVGLGVRF 223 >gi|299134299|ref|ZP_07027492.1| porin [Afipia sp. 1NLS2] gi|298591046|gb|EFI51248.1| porin [Afipia sp. 1NLS2] Length = 275 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 69/238 (28%), Gaps = 86/238 (36%) Query: 52 DFNGPYAGLSALYNGS---------------------------------FGEEAHHNAGG 78 ++ G YAG A Y + G+ H + Sbjct: 40 NWQGFYAGGQAGYGSADMNFSSSNSAMIAQLLANTNIENEMNVSSWPLLGGKTNTHQSQV 99 Query: 79 SIFAGYNVEDSCIMYGVEG------------------------DVRYTVPVLADNIHSLH 114 F GYN + ++ GVE D Y + + + Sbjct: 100 GGFVGYNSQWDDVVLGVEANYMHGTFSGASVSAPVSRGMLLTSDSLYHIVTVNSSKSISI 159 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-------------------------YETG 149 G++R R GY + + Y G + + + Sbjct: 160 SDMGTIRARAGYVWGN-FMPYVFGGAALGRGNIYSAVSVSDQKGADSAAAQAATPVTLSA 218 Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK--VEGFYNTISLGVGMKF 205 G + G TAG+G EV ++ AR E+ ++ + NT+ G+G KF Sbjct: 219 SDGISGKMLYGYTAGLGTEVMLF-GNVFARAEWEYIRFVNAGADVNINTVRGGLGYKF 275 >gi|169825359|ref|YP_001691252.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46] gi|168199281|gb|ACA21227.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46] Length = 583 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 62/222 (27%), Gaps = 63/222 (28%) Query: 20 SAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH----- 74 +A AAD + P +A V + GPYAG+ Y GS E Sbjct: 20 AASAADLPQLTP-------PMMAFAPLVTPSFTWTGPYAGVFFGY-GSLDESGTGRCIGP 71 Query: 75 ---------------NAGGSIFAGYNVED---SCIMYGVEGDV------RYTVPVLADNI 110 + GYN++ S ++ G D Y +L + Sbjct: 72 RCVRLPALSPGARAADLSAGSEVGYNLQASPGSGLVIGAAVDYQTTRLRGYGESILVREV 131 Query: 111 HSLHGIG------------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA------- 151 G++R + GY D L +Y T G Sbjct: 132 DENSDFAAFYHLGQRLDTFGAVRGKAGYAF-DRLFVYGTGGLAYGYVRIDVGTALTVGDR 190 Query: 152 -----GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 G + +G AG G E +S L + E Sbjct: 191 QFAAQGLTSGFRLGYAAGGGAEY-AISPHLSVKAEGLYYDLG 231 >gi|148252997|ref|YP_001237582.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1] gi|146405170|gb|ABQ33676.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1] Length = 665 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 74/236 (31%), Gaps = 75/236 (31%) Query: 42 ATNRYVPIRHDFNGPYAGLSALY-------------------NGSFGEEAHHNAGGS--- 79 A + Y +D+ G Y G A +GSFG + + Sbjct: 3 AQSPYTSTVYDWTGWYIGAHAGALRGSSSWTATPLGPGGPPVSGSFGLPLNFDFMAGTGT 62 Query: 80 ----IFAGYNVEDSC-IMYGVEGDVR---------YTVPVLADNIHSLHG---------I 116 + GYN +M G+EGDV Y+V I G Sbjct: 63 YVLGLQGGYNYVLPSRVMLGIEGDVSVPNSDVVVPYSVRGGQTVISPAIGQVTYSEAVIH 122 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI---------------AIGG 161 GS+R R GY D LLY T G T +G Sbjct: 123 YGSVRGRVGYAF-DHFLLYGTGGFAWTYDQLTRSQDASPVTGSFVPAGTLETKLLWRLGW 181 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMK 204 AG+GVE+ ++ + A+ E+ + + + + ++ +G+ K Sbjct: 182 VAGIGVEIP-ITGNWSAKAEFLETGFGRRGAFFAASIDAFRSDFATQSVRVGLNYK 236 >gi|311280058|ref|YP_003942289.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1] gi|308749253|gb|ADO49005.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1] Length = 234 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 47/183 (25%) Query: 53 FNGPYAGLSALYNGSFGEEAH---------------HNAGGSIFAGYNVE-DSCIMYGVE 96 F+G Y G + Y + + G I AG+ + D+ I+ GVE Sbjct: 25 FDGWYVGGNFGYGSGTNHDVYVVPGNAEASGTPRDIDGTIGGIQAGHYWQLDNNIVLGVE 84 Query: 97 GDVRYTVPVLADNIHSLHGIGG-----------SLRIRGGYEVSDSLLLYATVGPDVAQK 145 + ++ I + I +L + GY + + L+Y T G VA Sbjct: 85 T--GWQAANISGGISNAESISEYYDQIEINQAFNLNFKAGYAIEN-WLIYTTAGLTVASM 141 Query: 146 Y----------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 +G G GVE + S A LEY+ + + Sbjct: 142 DYARGCYSDPTTTIKDCLDPYDATADGTRVGYNVGAGVE-WKFNNSFSAALEYKYTDLGE 200 Query: 190 VEG 192 + Sbjct: 201 SDA 203 >gi|148258433|ref|YP_001243018.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1] gi|146410606|gb|ABQ39112.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1] Length = 193 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 63/195 (32%), Gaps = 39/195 (20%) Query: 46 YVPIRHDFNGPYAGLSAL-----YNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDV 99 + + G Y G +G+FG E+ G + G + + + G EG Sbjct: 3 QISPVRSWTGLYVGGHLGGEFSGASGAFGRESR--FLGGLQFGADYQFAPNWVLGAEGQY 60 Query: 100 RYTVPVLADNIHSLHGIG------GSLRIRGGYEVSDSLLLYATVGPDVAQKY--ETGKA 151 + + + G L R GY LLY G + +A Sbjct: 61 SWLAGNGQTSSLGRRELTRDRNGIGGLTGRLGYTWGAG-LLYVKGGYAYQDRSYGVRSRA 119 Query: 152 GEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKV---------------- 190 G A+ G T G G+E + + +LEY+ + Sbjct: 120 GAPVAFAVRDNKSGYTVGAGLEY-MFAPNWSTKLEYQYYDFGTARFVAPSPGRLVRNGTF 178 Query: 191 EGFYNTISLGVGMKF 205 + +T+S+GV +F Sbjct: 179 DSTLHTVSVGVNYRF 193 >gi|188583655|ref|YP_001927100.1| porin [Methylobacterium populi BJ001] gi|179347153|gb|ACB82565.1| porin [Methylobacterium populi BJ001] Length = 288 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 51/177 (28%), Gaps = 52/177 (29%) Query: 52 DFNGPYAGLSALYNGSFGEE-----------------------------AHHNAGGSIFA 82 + G YAG +A Y ++ ++ G Sbjct: 40 TWTGFYAGFNAGYGFGTQDDRAPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQI 99 Query: 83 GYNVED---SCIMYGVEGDVRYTVPVLADNIH-----------------SLHGIGGSLRI 122 GYN + S + GVE D +Y N S G++R Sbjct: 100 GYNYQFTPGSGFVIGVEADAQYADFGRNRNRFVSTSPLAAQQVFNPAGLSGLDFFGTVRG 159 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 R GY D L+Y T G G G AG GVE ++S + Sbjct: 160 RLGYAF-DRTLVYGTGGFAYGSGGGREFGTGVSSDDFQTGWVAGGGVEYALPTDSFL 215 >gi|220924333|ref|YP_002499635.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060] gi|219948940|gb|ACL59332.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060] Length = 494 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 39/141 (27%) Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAG--LSALYNGSFGEEAHHNAGGS---------- 79 +P A + D++G Y G L + +G GG Sbjct: 20 ASRAADLPAQAAPIPAFVVQDWSGFYVGSHLGGVVSGRGERRVVSGDGGGLIPAGFGGRG 79 Query: 80 ------------------IFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 + AGYN + + G+E D+ PV + GS+R Sbjct: 80 GRTGIAIGRIEGRTVFQGVHAGYNWQQGSAVAGIEADLASLGPV--------DDLLGSVR 131 Query: 122 IRGGYEVSDSLLLYATVGPDV 142 R G+ SD LL+Y T G + Sbjct: 132 GRLGFG-SDRLLIYGTGGLAI 151 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 38/131 (29%), Gaps = 44/131 (33%) Query: 52 DFNGPYAGLSALYNGSFGEEAHHNAG---------------------------------- 77 + G Y G + + Sbjct: 265 SWAGAYVGGHLGALHTLSGRTFGSTALAGGEPGGAGQRGIDGGGGGGGAVAFAGLARSPA 324 Query: 78 --GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 G GYN +++ ++YG EGDV + H G++R R G+ + L+Y Sbjct: 325 ILGGAHLGYNWQNAALVYGAEGDVSVSAADS-------HRYLGTIRGRLGWS-GGATLVY 376 Query: 136 ATVGPDVAQKY 146 AT G A Sbjct: 377 ATAGVAFAGNE 387 >gi|170747715|ref|YP_001753975.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170654237|gb|ACB23292.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 276 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 51/172 (29%), Gaps = 48/172 (27%) Query: 53 FNGPYAGLSALYN-----------------------GSFGEEAHHNAGGSIFAGYNVE-- 87 + G Y G++A Y SF + + G GYN + Sbjct: 41 WTGAYFGINAGYAFDASSRTNNTFAVPFPYAAPGTVASFRDRSQDGFSGGAQIGYNWQIT 100 Query: 88 -DSCIMYGVEGDVRYTVPVLADNIH------------------SLHGIGGSLRIRGGYEV 128 S ++ G E D +Y N S G++R R GY Sbjct: 101 PGSGVVIGFEADAQYLDFGRNRNNAFISGAVAPGYYVTDPRGLSSLDYFGTVRGRLGYAF 160 Query: 129 SDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLV 177 D L+YAT G G G G G+E ++S + Sbjct: 161 -DRTLVYATGGFAYGSGSADRSFGGYAGNDSFRTGYAVGGGIEYALPTDSFL 211 >gi|119385805|ref|YP_916860.1| putative outer membrane protein [Paracoccus denitrificans PD1222] gi|119376400|gb|ABL71164.1| putative outer membrane protein [Paracoccus denitrificans PD1222] Length = 203 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 20/167 (11%) Query: 51 HDFNGPYAGLSALYNGSF--GEEAHHNAGG--SIFAGYNVE-DSCIMYGVEGDVRYTVPV 105 + + G YAG+ Y+ + GG I AGYN + + ++ G E ++ Sbjct: 45 NTWTGFYAGMQMSYSDFSVNRDGVDDATGGVYGIHAGYNHQLHNNMVIGGEITFDHS--- 101 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 ADN ++R + GY ++ L+Y G + +A + G G+ Sbjct: 102 SADNDVWQVERLMTVRAKVGYA-HNNWLVYGLAGYAHVRTEGADRAHGKSG---GAVFGI 157 Query: 166 GVEVGGLSESLVARLE---YRASKYS----KVEGFYNTISLGVGMKF 205 G + +S+ + YR S + +E ++ V +F Sbjct: 158 GADY-AVSDKWLVGGSWEGYRFSDFKNDPDNMEVDGGSVRFRVSYRF 203 >gi|296446346|ref|ZP_06888291.1| putative 31 kDa outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] gi|296256119|gb|EFH03201.1| putative 31 kDa outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] Length = 247 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 53/194 (27%), Gaps = 41/194 (21%) Query: 53 FNGPYAGLSALYNG----SFGEEAHHNAGGSIFAG---------------------YNVE 87 + G Y G + Y + G G AG YN + Sbjct: 40 WTGFYLGANVGYGWLDNYTRGNSITGWNGAGWVAGAPNVADNGSSNGGVVGGGQVGYNYQ 99 Query: 88 -DSCIMYGVEGDVRYTVPVLAD----NIHSLHGIGGSLRIRGGYEVSDS-LLLYATVGPD 141 + GVE D++ G++R R G + LL+Y T G Sbjct: 100 FHPAWVVGVEADMQAANIGDNGPSFLGTTRAVDWFGTVRARIGTTLFSPELLIYGTGGFA 159 Query: 142 VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--GFYN---- 195 G G + + A++EY + + GF N Sbjct: 160 YGDVRLKHALLGTLGQTGTGWTAGGGLEWLFAPNWSAKVEYLYTDIGSSDWGGFNNFEQR 219 Query: 196 ----TISLGVGMKF 205 ++ GV F Sbjct: 220 VHVQSVRAGVNYHF 233 >gi|163853839|ref|YP_001641882.1| porin [Methylobacterium extorquens PA1] gi|218532784|ref|YP_002423600.1| porin [Methylobacterium chloromethanicum CM4] gi|240141293|ref|YP_002965773.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens AM1] gi|254563802|ref|YP_003070897.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium extorquens DM4] gi|163665444|gb|ABY32811.1| porin [Methylobacterium extorquens PA1] gi|218525087|gb|ACK85672.1| porin [Methylobacterium chloromethanicum CM4] gi|240011270|gb|ACS42496.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens AM1] gi|254271080|emb|CAX27087.1| putative 31 kDa outer-membrane immunogenic protein precursor (omp31) [Methylobacterium extorquens DM4] Length = 296 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 51/197 (25%), Gaps = 60/197 (30%) Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYN-----------------------------GSFG 69 + P + G YAG +A Y G Sbjct: 27 AAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNGAAPVVGVNSLTGLVRPGQTAVIAFGG 86 Query: 70 EEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRY-----------------------TV 103 G GYN + S ++ G+E D +Y Sbjct: 87 NSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYVDFGRDRNQFAVANSNPAFPGVAAQ 146 Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA---GEITPIAIG 160 V N S G++R R GY D +L Y T G G Sbjct: 147 QVFNPNGLSSLDFFGTVRGRLGYAF-DRVLFYGTGGFAYGAGGGRQFGLPNSSSDDFRTG 205 Query: 161 GTAGVGVEVGGLSESLV 177 AG GVE ++S + Sbjct: 206 YAAGGGVEYALPTDSFL 222 >gi|94497477|ref|ZP_01304047.1| outer membrane protein-like [Sphingomonas sp. SKA58] gi|94423108|gb|EAT08139.1| outer membrane protein-like [Sphingomonas sp. SKA58] Length = 217 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 81/234 (34%), Gaps = 46/234 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+KL +A ++ + + A P G P + + +D G AG Sbjct: 1 MRKLMVATLLAGVGV--------ATPALAQDVGSTFTGPRV----EAILGYDHVG--AGS 46 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 N +++ I AGY+V + GVEG+ +T + + L G Sbjct: 47 DVDNNNGRDDQSIDGLLYGIGAGYDVNLGSAVVGVEGE--WTDSTAKSDRYDLTDQFGFG 104 Query: 121 R----------IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI----GGTAGVG 166 R R G + + L+Y G ++ + T G G G Sbjct: 105 RVSQGRDLYIGARAGILANPATLVYVKGGYTNSKLNILAGNTDETTDRSFKLDGWRIGAG 164 Query: 167 VEVGGLSESLVARLEYRASKYS---------------KVEGFYNTISLGVGMKF 205 VE ++ + A+LEYR S Y+ V+ + + VG +F Sbjct: 165 VE-RAINTNTFAKLEYRYSNYTDAHIDYMDGATSADFDVDTDRHQVVASVGWRF 217 >gi|87199458|ref|YP_496715.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM 12444] gi|87135139|gb|ABD25881.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM 12444] Length = 223 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 43/199 (21%) Query: 49 IRHDFNGPYAGLSALYNGSF---------GEEAHHNAGGSIFAG---YNVEDS-CIMYGV 95 F+G +A Y+ + + + G + G Y++ ++ G Sbjct: 26 PAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTNLVAGA 85 Query: 96 EGDVRYTVPVLADNIHSLHGIGGS---------LRIRGGYEVSDSLLLYATVGPDVAQKY 146 E ++ + +N + + R GY +S S ++Y G A+ Sbjct: 86 EAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYN 145 Query: 147 ETGKAGE----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK------------- 189 G G A G G GVE + E+ +LEY+ + YSK Sbjct: 146 LQGTDGTTNLRQRLDADGYRVGAGVE-QKVGENAFVKLEYKYANYSKGEFDFNGDTPDSS 204 Query: 190 ---VEGFYNTISLGVGMKF 205 ++ ++I+ GVG++F Sbjct: 205 RFNLDTDRHSITAGVGVRF 223 >gi|148555915|ref|YP_001263497.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1] gi|148501105|gb|ABQ69359.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1] Length = 172 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 15/160 (9%) Query: 52 DFNGPYAGLSALYNGSFGEEA-----HHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPV 105 DF GPY G + G A G + FAGYN+ GVE ++ Sbjct: 22 DFAGPYVGGGVTLDNVQGSGALEGVGFSGVGATAFAGYNLPVGASTFAGVEANIDLN-TA 80 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 A I + G G + R GY+++DS LYA G + G +G + G Sbjct: 81 DAGGIEAKWGWG--VGARFGYKLNDSTALYARAGYARGKIEVLGSSGWGDGVRY----GA 134 Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 G+E +++S+ R E+ + Y + N +LG+ F Sbjct: 135 GLETR-VTDSVSLRAEFTQTNYES-DIINNQGTLGIVFGF 172 >gi|296446925|ref|ZP_06888861.1| porin [Methylosinus trichosporium OB3b] gi|296255600|gb|EFH02691.1| porin [Methylosinus trichosporium OB3b] Length = 429 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 56/181 (30%), Gaps = 30/181 (16%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---AHHNAGGSIFAGYNVE-DSCIMY 93 PT+ G G + +G+F + G + GY+ + + Sbjct: 218 PPTLPPFEGGGPSF---GVLVGTAVG-DGAFADPVPMQGAGFLGGLRLGYDFKLTPRFLV 273 Query: 94 GVEGDVRYTVPVLADNIHSLH------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 G E D +Y + + G G+ R R GY V D +Y T G Sbjct: 274 GFETDSQYRSDLGGGSNSHGSISGVRGGYLGTFRGRLGY-VIDRWTVYGTGGLAYGHILA 332 Query: 148 --------------TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 T + + G T G GV+ L+ L R EY ++ Sbjct: 333 PRTFSGSNLINSIPTTGVSQSYQLVPGWTVGAGVQF-ALAPGLSLRAEYLYTQLQHSNPT 391 Query: 194 Y 194 Y Sbjct: 392 Y 392 >gi|170726262|ref|YP_001760288.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908] gi|169811609|gb|ACA86193.1| OmpA domain protein transmembrane region-containing protein [Shewanella woodyi ATCC 51908] Length = 184 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 18/178 (10%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 I + V +D +G Y G S E++ + G + GYN D +G+E ++ Sbjct: 13 AIFASSNVAAANDHSGFYVGGSLGQLKVKTEDSDNGLGFGAYGGYNFND---WFGLEANM 69 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIA 158 + + + G + + Y+++D+ +Y VG G + Sbjct: 70 YLSGDLGGNGYDLGAGTF-AFTPKFTYQINDTFAVYGKVGIASMAVVYRPDRGIDEDFTG 128 Query: 159 IGGTAGVGVEVGGLSESLVARL-----------EYRASKYSKVEGFYNTISLGVGMKF 205 G GVGV ++E+L RL EY S+ V+ + +LG+ +F Sbjct: 129 FGWVYGVGVNAS-ITENLNIRLGYDIVKGDLDSEYSFSE-QNVDTDISNFALGMHYQF 184 >gi|319783372|ref|YP_004142848.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169260|gb|ADV12798.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 400 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 53/172 (30%), Gaps = 21/172 (12%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGS----------FGEEAHHNAGGSIFAGYNVE-DSCI 91 +++G Y G+ + S F + G + AGY+ Sbjct: 2 QPVEEAAGFNWSGAYVGIGGGFGASVHKFSVPGLDFNGLGGNGVFGELTAGYDYMVSERF 61 Query: 92 MYGVEGDVRYTV-----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 + G D + + ++ + G + +R GY ++ + L Y G Sbjct: 62 LLGGFIDANLSNIGPSLSIAGGDVDLTNSYGFDVGLRAGYLLNPNTLGYVLGGYTWQHFK 121 Query: 147 ETGKAGEI----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 G + G GVG+E L + + EYR + Y Sbjct: 122 LDGSGAADGLEFSQNRSGYVLGVGMET-VLRGNWTLKTEYRYADYGDKSVLD 172 Score = 52.0 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 64/194 (32%), Gaps = 35/194 (18%) Query: 47 VPIRHDFNGPYAGLSALY----------NGSFGEEAHHNAGG-SIFA----GYNVEDSCI 91 +D+ G YAG + G + GG +F GY+ + Sbjct: 206 AAPTYDWTGFYAGGALGAGTMVHDLNLNLGLGASGELNGIGGEGVFGEASVGYDHDFGSW 265 Query: 92 MYGVEGDVRYTVPVLADN-----IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 + GV+ D RY+ + I G R G +V++S L Y G Sbjct: 266 VAGVQLDARYSGIQTKLDLGPVSIKGDADYGFDALARIGAKVNESTLAYVLGGYSWQHFD 325 Query: 147 ETGKA-GEITPIAIGGTAGVGVEVG----GLSESLVARLEYRASKYSKVEGFY------- 194 +A G + + G +S ++ LEYR S+Y K + Sbjct: 326 LHAEAPGGGSADIYDWGSSGFSIGGGLETAVSSNMTVGLEYRYSQYQKEDFGSGGILEDT 385 Query: 195 ---NTISLGVGMKF 205 T+ LG KF Sbjct: 386 PSFQTVRLGAKYKF 399 >gi|299134642|ref|ZP_07027834.1| conserved hypothetical protein [Afipia sp. 1NLS2] gi|298590452|gb|EFI50655.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 486 Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 63/192 (32%), Gaps = 34/192 (17%) Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------------GSIFAGYNVE-DSC 90 V ++ G Y Y ++ G G++ GY+ + Sbjct: 33 VAPVSNWTGFYVTGGFGYGLMSSDQHSTTGGAATSVDTRTGGRGYFGTVGLGYDYQLTPA 92 Query: 91 IMYGVEGDVRYTVPVLADNIHSLHGIGG--------SLRIRGGYEVSDSLLLYATVGPDV 142 + GV GD ++ + GI G S R GY V+ ++L Y G Sbjct: 93 WVVGVFGDAQWGDIRGDLIDITTPGISGRLKNDAAYSAGARLGYLVAPNVLSYVNAGYSY 152 Query: 143 AQKYETGKAGE----ITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGF 193 Q + + G G GVE G + + EYR ++Y + Sbjct: 153 GQFKGSTFSDGVTAIDKSHRDGWFIGGGVENDLNFFGIKAPGWFMKTEYRVTEYDRKNSL 212 Query: 194 YNTISLGVGMKF 205 YN S G G+ F Sbjct: 213 YNDGS-GNGIAF 223 Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 42/186 (22%) Query: 49 IRHDFNGPY----------------AGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCI 91 +++ G Y L+ NG G++ GY+ + + Sbjct: 260 AAYNWTGFYLAGGGGYGLMSSDQHTVDLATGANGLDTRAGGRGYFGTVGGGYDWQINPTW 319 Query: 92 MYGVEGDVRYTVPVLADNIHS------------LHGIGGSLRIRGGYEVSDSLLLYATV- 138 + GV GD ++ + + + + R GY +S + L Y V Sbjct: 320 VVGVFGDAQFGDIRGSLADATGGGLGAGVTGRLKNDTNYAAGARLGYLISPNALSYVNVG 379 Query: 139 -------GPDVAQKYETGKAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASK 186 G + G G GVE G S + EYR ++ Sbjct: 380 YSHADFKGVALTNATGAAVGSTGKSHRDGWFLGGGVENSLNIFGISSPGWFMKTEYRVAE 439 Query: 187 YSKVEG 192 Y + Sbjct: 440 YDRKTS 445 >gi|21111442|gb|AAM39773.1| membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572140|gb|AAY47550.1| membrane protein [Xanthomonas campestris pv. campestris str. 8004] Length = 377 Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 29/171 (16%) Query: 55 GPYAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS- 112 G G +A + G + A + AGY+ + +YGV + YT L D++ + Sbjct: 175 GFCGGAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAE--YTRNDLRDSVSAF 232 Query: 113 -----------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKA 151 +LR R GY L Y T G + Sbjct: 233 STTPALYTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFDHSFASSNTANSFT 292 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 G A G AG+G++ LS+ + +EY ++ + + +G G Sbjct: 293 GSGGDSANGYQAGIGLQ-RRLSDHVSVGVEYLFTRLQDEDT---RVRVGPG 339 >gi|240142350|ref|YP_002966860.1| putative porin [Methylobacterium extorquens AM1] gi|240012294|gb|ACS43519.1| putative porin [Methylobacterium extorquens AM1] Length = 293 Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 50/181 (27%), Gaps = 54/181 (29%) Query: 50 RHDFNGPYAGLSALYNGSFGEEAH-----------------------------HNAGGSI 80 + G +AG +A Y ++ G Sbjct: 40 VFTWTGFFAGFNAGYGFGTSDDRGPITAAVPGTYGVFSNPGPQVIAFAGQRSADGFVGGG 99 Query: 81 FAGYNVED---SCIMYGVEGDVRYTV------------------PVLADNIHSLHGIGGS 119 GYN + S ++ GVE D +Y N + G+ Sbjct: 100 QIGYNYQFTPGSGVVVGVEADAQYVDFGSDRNRFVATSPLAPGAVAFNPNTLTGLDYFGT 159 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESL 176 +R R GY D L+YAT G G T G GVE ++S Sbjct: 160 VRGRLGYAF-DRTLVYATGGFAYGSGGGRDFGLPNFTRDEFQTGWTVGGGVEYALPTDSF 218 Query: 177 V 177 + Sbjct: 219 L 219 >gi|259415944|ref|ZP_05739864.1| putative outer membrane protein [Silicibacter sp. TrichCH4B] gi|259347383|gb|EEW59160.1| putative outer membrane protein [Silicibacter sp. TrichCH4B] Length = 198 Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 22/165 (13%) Query: 52 DFNGPYAG-----LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106 D+ G Y G A + + + GYN + + G E + Y Sbjct: 45 DWTGFYGGLQYGQGEADLSLGGASASEDFDAFGVHGGYNHDFGRYVLGGE--LMYNDI-- 100 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 + G SLR R G ++ + Y T G + +I+ G T GVG Sbjct: 101 -SGDNGGDGDLTSLRARAGMDL-GRFMPYVTAGV--SHLSLASGGADISE--NGFTYGVG 154 Query: 167 VEVGGLSESLVARLEYRASKYSK------VEGFYNTISLGVGMKF 205 E +SE LEY S +S + + + L +F Sbjct: 155 AEYL-VSERFSVGLEYTKSDFSDAGGVAGADLDTDKVQLRASYRF 198 >gi|163853385|ref|YP_001641428.1| porin [Methylobacterium extorquens PA1] gi|218532243|ref|YP_002423059.1| porin [Methylobacterium chloromethanicum CM4] gi|240140802|ref|YP_002965282.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens AM1] gi|254563312|ref|YP_003070407.1| outer-membrane immunogenic protein [Methylobacterium extorquens DM4] gi|163664990|gb|ABY32357.1| porin [Methylobacterium extorquens PA1] gi|218524546|gb|ACK85131.1| porin [Methylobacterium chloromethanicum CM4] gi|240010779|gb|ACS42005.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens AM1] gi|254270590|emb|CAX26593.1| putative outer-membrane immunogenic protein precursor [Methylobacterium extorquens DM4] Length = 288 Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 52/177 (29%), Gaps = 52/177 (29%) Query: 52 DFNGPYAGLSALYNGSFGEE-----------------------------AHHNAGGSIFA 82 + G YAG +A Y ++ ++ G Sbjct: 40 TWTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQI 99 Query: 83 GYNVED---SCIMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRI 122 GYN + S ++ GVE D +Y V S G++R Sbjct: 100 GYNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRG 159 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYET--GKAGEITPIAIGGTAGVGVEVGGLSESLV 177 R GY D L+Y T G G G AG G+E ++S + Sbjct: 160 RLGYAF-DRTLVYGTGGFAYGSGGGREFGTGVSSNDFQTGWAAGGGIEYALPTDSFL 215 >gi|157377581|ref|YP_001476181.1| outer membrane protein, putative [Shewanella sediminis HAW-EB3] gi|157319955|gb|ABV39053.1| outer membrane protein, putative [Shewanella sediminis HAW-EB3] Length = 182 Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 16/161 (9%) Query: 55 GPYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 G Y G + + G G I+ GYN DS +G+E + T ++ + Sbjct: 26 GFYLGGQVNHTSVEDNIGTLDESAIGLGIYGGYNFNDS---FGIETSIFLTDSLVDEMDL 82 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 + + S IR + +DS+ Y G V + Y + G G GV+V Sbjct: 83 RIAAVTISPVIR--HAFTDSVTGYLKAGLVVNKTYSNDDGVDEDYRGTGWLFGAGVDVT- 139 Query: 172 LSESLVARLEYRAS----KYSKVEGFYNTISL---GVGMKF 205 L+ESL R+ Y S +YS++E +Y ISL GVG+ + Sbjct: 140 LTESLALRVSYEMSETEPEYSELENYYADISLKQFGVGLHY 180 >gi|296446779|ref|ZP_06888717.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] gi|296255654|gb|EFH02743.1| putative outer-membrane immunogenic protein precursor [Methylosinus trichosporium OB3b] Length = 312 Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 52/201 (25%), Gaps = 50/201 (24%) Query: 40 TIATNRYVPIRHDFNGPYAGLSAL----YNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYG 94 T Y +D+ G+ Y G GYN V + ++G Sbjct: 59 TSEARTYGYSVYDWASGALGMPFGFSSPYVSGLASLQQDGFIGGAQIGYNHVGPAGFLFG 118 Query: 95 VEGDVRYTVPVLAD----------------------NIHSLHGIGGSLRIRGGYEVSDSL 132 VE D + + ++ + G GS+R R GY + +L Sbjct: 119 VETDFDGSTLRGSGASNGFASQVDAHGLLHLQAGRADVRAGLGWLGSVRGRFGYFFNPAL 178 Query: 133 LLYATVGPDVAQKYET----------------------GKAGEITPIAIGGTAGVGVEVG 170 L Y T G + + G +G AG G E Sbjct: 179 LFYGTGGLAYGGTFGSISTLGFHWHPQDPIGHPDNPVLPAWGSFDAARVGWIAGGGFEWS 238 Query: 171 GLSESLVARLEYRASKYSKVE 191 + + E Sbjct: 239 -FAPQWSVKTEALYYDLGSRR 258 >gi|92117608|ref|YP_577337.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis X14] gi|91800502|gb|ABE62877.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis X14] Length = 251 Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 29/182 (15%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALY--NGSFGEEAHHNAGG---------SIFAGYNVE 87 P + +D++G Y G + + + S + AGG GY + Sbjct: 30 PYTKAPPMIAAIYDWSGFYVGANGGWGSSRSCWDLTAPVAGGCHDATGGTIGGQIGYRWQ 89 Query: 88 DSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 + +++G+E + + HS G + GY D+ LLY G Sbjct: 90 SNNLVFGLEAQGNWADLNGRNVSIDFSRFTNHSRLDAFGLFTGQIGYSW-DATLLYVKGG 148 Query: 140 PDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 V A + GG GVG+E G + + EY Sbjct: 149 AAVTSNRYRSVDNVSGLQAADSVNDTRWGGVVGVGLEY-GFAPNWSLGFEYDHIFMGNSS 207 Query: 192 GF 193 Sbjct: 208 HT 209 >gi|27380285|ref|NP_771814.1| hypothetical protein blr5174 [Bradyrhizobium japonicum USDA 110] gi|27353449|dbj|BAC50439.1| blr5174 [Bradyrhizobium japonicum USDA 110] Length = 256 Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 54/195 (27%), Gaps = 35/195 (17%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--------------G 83 T A V +D+ G Y G + + S G G++ G Sbjct: 29 PYTKAPPPIVAPIYDWTGFYIGANGGWGQSRGCVDFVTLAGTVAGGCASRSGGLVGGQIG 88 Query: 84 YNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLY 135 Y + + + G+E + + G + G+ + S LLY Sbjct: 89 YRWQTNQFVLGLEAQGDWADIKNTRVSLIDPLLSTTGKTDGIGLFTAQLGWAWNAS-LLY 147 Query: 136 ATVGPDVAQKYET-------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS 188 G V + GG GVG E G + + +EY Sbjct: 148 VKGGAAVTHNRLDVFNNLTGVGLDSASHTRWGGALGVGWEY-GFAPNWSVGVEYDHLWMG 206 Query: 189 KVEGFYNTISLGVGM 203 N G G+ Sbjct: 207 N----DNRTFAGAGV 217 >gi|296445166|ref|ZP_06887126.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium OB3b] gi|296257340|gb|EFH04407.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium OB3b] Length = 467 Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 62/196 (31%), Gaps = 18/196 (9%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG-----------SFGEEAH 73 D + + + G + G + +F Sbjct: 58 DVTGSIPMAASAPLVGVDAAHAALSAPLWTGFHVGATIGSGWAITPLAIPNAATFSGVGM 117 Query: 74 HNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPVLADNIHSLHGIGGSLRIRGGYEVSD 130 G + AG++ ++ G+ D + + ++ +LR R G S+ Sbjct: 118 SGVAGGVTAGFDYRFGSVVAGIAADGNLKSTSAYLSGVDVTFREAASWALRGRLGGLASE 177 Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAI-GGTAGVGVEVGGLSESLVARLEYRASKYS- 188 L+YAT G A T G+ + G GVGVE L+ L R EY S + Sbjct: 178 DTLVYATAGVTQAITKLTYPTGDSDDVRYTGAIFGVGVETR-LAAGLYGRAEYLQSLFGQ 236 Query: 189 -KVEGFYNTISLGVGM 203 +G L G+ Sbjct: 237 RNFDGGRYNARLESGV 252 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 59/182 (32%), Gaps = 24/182 (13%) Query: 33 GGRGVVPTIATNRYVPIRHDFNGPYAGLSALY----------NGSFGEEAHHNAGGSIFA 82 G +P + G + G Y + + G Sbjct: 265 GDWSGLPVGLAAASSTQPESWTGAHIGAHGGYAFGSTKLTSGSWTGDGVGGAGGVGGALL 324 Query: 83 GYNVEDSCIMYGVEGD---------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLL 133 GY+ + + GVE D T+ + N + S+R R G + S L Sbjct: 325 GYDYQWGRSVLGVEIDGSGGGARSTASVTLRRFSANAQIAYDWDYSIRARAG-RLFGSTL 383 Query: 134 LYATVGPDVAQKYETG---KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 L+ TVG T E + + G G GVE L+ L ARLEY S Y K Sbjct: 384 LFGTVGWTQTYGRLTTAGLGGIETSHLFSGVQLGGGVET-MLTTHLGARLEYLHSFYDKY 442 Query: 191 EG 192 G Sbjct: 443 AG 444 >gi|323139417|ref|ZP_08074467.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] gi|322395349|gb|EFX97900.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] Length = 304 Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 49/177 (27%), Gaps = 43/177 (24%) Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHS---- 112 A + G G + G GY + I+ GVE D++ + + Sbjct: 79 AAAALGATGVLGASGNGGFIGGGQIGYTWQFHRNIVAGVEADIQGIASGVGGGSLTTTVP 138 Query: 113 -------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG---- 149 G++R R GY S +LLLY T G Sbjct: 139 VMLPAAPFPSANTVMSASRSLDYLGTVRGRIGYLFSPTLLLYGTGGLAYGGVSLNVTGLQ 198 Query: 150 --------------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 + +G +AG G+E + A+ EY V Sbjct: 199 SFTLGTPGFITTGFGGSSFSDTRVGWSAGGGLE-WMFWPNWSAKAEYLYYDLGSVRT 254 >gi|310815861|ref|YP_003963825.1| putative outer-membrane immunogenic protein precursor [Ketogulonicigenium vulgare Y25] gi|308754596|gb|ADO42525.1| putative outer-membrane immunogenic protein precursor [Ketogulonicigenium vulgare Y25] Length = 220 Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 79/208 (37%), Gaps = 41/208 (19%) Query: 36 GVVPTIATNRYVP------IRHDFNGPYAG-------LSALYNGSFGEEAH--------- 73 G +P A ++VP F+G Y G S NG G++A Sbjct: 16 GTLPMAAAAQHVPRIVVMTPSVGFSGGYVGFGLNRDSGSIDMNGETGDQAQQLLGTRSLG 75 Query: 74 --HNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV-------LADNIHSLHGIGGSLRIRG 124 G ++ AGY+ ++GV G++ + ++D G + +R Sbjct: 76 EPSGLGLNLRAGYDWRTGNTIFGVWGEIAQSWAKDDVVIPAVSDTWSVGFGTSTAAMLRL 135 Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 GY++ +++Y+ G +G + + G + GVG+E S + LE+ Sbjct: 136 GYDMGG-VMVYSNAGYRWTDVELETFSGAYSDRSGGISYGVGIETE-FSHHMSGYLEF-H 192 Query: 185 SKYSKV-------EGFYNTISLGVGMKF 205 KV + NT +LGV KF Sbjct: 193 RNTGKVDIEGLTADLSLNTFTLGVNYKF 220 >gi|188584143|ref|YP_001927588.1| porin [Methylobacterium populi BJ001] gi|179347641|gb|ACB83053.1| porin [Methylobacterium populi BJ001] Length = 302 Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 56/207 (27%), Gaps = 68/207 (32%) Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE---------------------- 71 R P + T + G YAG +A Y + Sbjct: 24 PRRAAPPVFTPV---PVFTWTGFYAGFNAGYGFGVEDSLAPTQVVTIDRRVVGGPVGAIA 80 Query: 72 --------AHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIHS-------- 112 G GYN + S ++ G+E D +Y + Sbjct: 81 GFAFDNGGRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYADLGGRFGRNGLCGTGGIA 140 Query: 113 ----------------------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150 G++R R GY D +L Y T G + G+ Sbjct: 141 CAVTPGAFVQPGVTLINPTGLQGLDFFGTVRGRIGYAF-DRVLFYGTGGFAYG-SFGGGR 198 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLV 177 A + G AG GVE ++S + Sbjct: 199 AVDTDDFKTGYAAGGGVEYALPTDSFL 225 >gi|114809812|gb|ABI81409.1| bacteria phage-associated hemin-binding membrane protein Pap31 [Bartonella vinsonii subsp. berkhoffii] Length = 182 Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 62/186 (33%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63 S +AL S +AQAAD V V P ++ P + G Y G Sbjct: 2 SVIALISTSAAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56 Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112 N FG++ G I+AG N+E ++ GVE D + + + Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDTKTLSTK 116 Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133 G+ R R G+ ++ ++ Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176 Query: 134 LYATVG 139 Y G Sbjct: 177 PYVAGG 182 >gi|89054446|ref|YP_509897.1| outer membrane protein, putative [Jannaschia sp. CCS1] gi|88863995|gb|ABD54872.1| outer membrane protein putative [Jannaschia sp. CCS1] Length = 207 Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 16/153 (10%) Query: 51 HDFNGPYAGLSALYNGSFGEEA-------HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103 +D++G Y G+ Y + A A +F GY + ++ G E D+ Sbjct: 44 YDWSGFYGGVQLEYGDVTADTAAGVEAATGDGALYGLFGGYRYDLGNVVVGAELDLNLAD 103 Query: 104 PVLADNIHSLHGIGGSLR---IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 L D + G S+ GY+ + LLY TVG A T G G Sbjct: 104 IDLDDPTGATIGSLDSVHRLGAEVGYD-AGPALLYGTVGVAQA----TATLGAADLQDNG 158 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGF 193 G G++ +++ + E ++ +G Sbjct: 159 YFYGAGIDYL-VTDQITVGAEVLQHEFDDFDGT 190 >gi|296282661|ref|ZP_06860659.1| outer membrane protein-like [Citromicrobium bathyomarinum JL354] Length = 222 Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 42/201 (20%) Query: 46 YVPIRHDFNGPYAGLSALYN---------GSFGEEAHHNAGGSIFA---GYNVEDSCIMY 93 V F+G + Y+ + +A G I+ GY+V+ I+ Sbjct: 23 QVDPDSPFSGFRIQGTTGYDQITAGSSVDDDGNDNNDQSAEGVIYGATIGYDVDLGNIVI 82 Query: 94 GVEGDVRYT--VPVLADNIHSLHGIGGS-------LRIRGGYEVSDSLLLYATVGPDVAQ 144 G E ++ + + G G + R G + + +++ YA G A+ Sbjct: 83 GPEAELTGSTADTDYENGDFEGFGFGNVSAGRDVYVGARIGVKANPNMMFYAKGGYTNAK 142 Query: 145 KYETGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS------------ 188 G + G G G+E +++ +EYR S YS Sbjct: 143 LNVRSNDGTTEFDTDYDLDGYRVGGGLEY-AFGKNMFTNIEYRYSNYSDANVDFNGTLPD 201 Query: 189 ----KVEGFYNTISLGVGMKF 205 V+ + +++G+G++F Sbjct: 202 TDQFDVDTDRHQVTVGLGVRF 222 >gi|217971469|ref|YP_002356220.1| OmpA domain-containing protein transmembrane region-containing protein [Shewanella baltica OS223] gi|217496604|gb|ACK44797.1| OmpA domain protein transmembrane region-containing protein [Shewanella baltica OS223] Length = 187 Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 9/152 (5%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 +D G Y G + G++ + G + GYN +G+E ++ T + Sbjct: 24 NDTTGFYVGGALNKVTLDGDDVTDSRSGTGLGAYGGYNF---NEWFGLEANLFATGDLGN 80 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167 ++ + G S + ++D +YA G ++ G T G GV Sbjct: 81 KDVDASAG-ALSFTPKFTAHINDIFSVYAKAGVATMLVKFESNGQKLDFTGFGWTYGAGV 139 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISL 199 ++E L R+ Y + K++ N++ L Sbjct: 140 NA-AVTEHLNIRVSYDVTT-GKLDADNNSLGL 169 >gi|27379810|ref|NP_771339.1| outer-membrane protein [Bradyrhizobium japonicum USDA 110] gi|27352963|dbj|BAC49964.1| blr4699 [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 60/205 (29%), Gaps = 38/205 (18%) Query: 15 LASFCSAQAADPVRRAHHGGRGVVP-TIATNRYVPIRHDFNGPYAG--LSALYNGSFGEE 71 L A A A P T A V +D++G Y G + Sbjct: 5 LIGAIGAVALSLSAPASAADLAARPYTKAPPPMVAAIYDWSGFYIGINGGGGSAHKCWDF 64 Query: 72 AHHNAGGSIFAG--------------YNVEDSCIMYGVEGDVRYTVPVLADNIH------ 111 G I G Y + + ++G+EG + DN+ Sbjct: 65 VTPVTGVLIGEGCHNATGGTVGGQVGYRWQSANWVFGLEGQGNWA-DFSGDNVSTTFIGT 123 Query: 112 -----SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKA---GEITPIAI 159 S G + GY +++L Y G V + Y+ Sbjct: 124 GLRDRSKINAFGLFTGQVGYAW-NNVLFYVKGGGAVVSDRYRGYDVITGLEFDRANETRW 182 Query: 160 GGTAGVGVEVGGLSESLVARLEYRA 184 GGT G G+E G + + +EY Sbjct: 183 GGTVGAGLEF-GFAPNWTVGVEYDH 206 >gi|66934583|gb|AAY58302.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii] Length = 182 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 62/186 (33%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63 S +AL S +AQAAD V V P ++ P + G Y G Sbjct: 2 SVIALISTSTAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56 Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112 N FG++ G I+ G N+E ++ GVE D + + + Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDTKTLSTK 116 Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133 G+ R R G+ ++ ++ Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGGDEKFVVGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176 Query: 134 LYATVG 139 Y G Sbjct: 177 PYVAGG 182 >gi|209886818|ref|YP_002290675.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5] gi|209875014|gb|ACI94810.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5] Length = 660 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 72/229 (31%), Gaps = 75/229 (32%) Query: 49 IRHDFNGPYAG-------------------LSALYNGSFGEEAHHNAGGS-------IFA 82 +D+NG YAG + +GSF + + G + Sbjct: 5 ALYDWNGWYAGVHVGAIRGLSNWSAIPPGAGAPGLSGSFDLPFNFDFIGGTGNYVAGLQG 64 Query: 83 GYNVEDSC-IMYGVEGDVRY--TVPVLADNIHSLHGIG----------------GSLRIR 123 GYN M G E D+ + + + ++ + GS R R Sbjct: 65 GYNHVFPSRAMLGFESDISFPNSDVQVPFSVRGSQTVSSPLTGQVTYGEAVIHYGSARAR 124 Query: 124 GGYEVSDSLLLYATVGPD-----VAQKYETGKAGEITPI----------AIGGTAGVGVE 168 GY D LLY T G V + G + +G AG G+E Sbjct: 125 AGYAF-DHFLLYGTGGLAWSYDQVTRTQVDGVSVGGAATPGTVDTRLLWRLGWAAGAGIE 183 Query: 169 VGGLSESLVARLEYRASKYS-------------KVEGFYNTISLGVGMK 204 + L+ + A+ EY A+ + + +I LG+ + Sbjct: 184 IP-LAANWTAKAEYLATGFGHKGMRFTGASEAFNSDLTMQSIRLGLNYR 231 >gi|170741349|ref|YP_001770004.1| porin [Methylobacterium sp. 4-46] gi|168195623|gb|ACA17570.1| porin [Methylobacterium sp. 4-46] Length = 255 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 76/223 (34%), Gaps = 60/223 (26%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS--ALYN 65 LA+ + AQAAD RRA VPT + G Y G + L + Sbjct: 5 AASGLLAVLAATGAQAADLPRRAAPPVVAPVPT----------FTWTGAYFGANVAGLVD 54 Query: 66 GSF---------GEEAHHNAGGSIFA---GYNVE---DSCIMYGVEGDVRYTVPV----- 105 G+F G + +AGG + GYN + ++ + G+EGD+ Y+ Sbjct: 55 GNFLLRSLAPLPGAASRPSAGGFVAGGTVGYNYQFAPENGFVAGLEGDIGYSGVRHTGII 114 Query: 106 ------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI----- 154 A+ ++R R GY +L+YAT G + G A Sbjct: 115 AAAGLGTANGRLQTDTYHATIRGRIGYAW-GPVLVYATGGWAFTEFNAEGVAATQRFGLG 173 Query: 155 ---------------TPIAIGGTAGVGVEVGGLSESLVARLEY 182 + G T G GV ++ + EY Sbjct: 174 AGRPFVGAFAGPVRRSIPLDGYTVGGGV-AYKITPDWSLKAEY 215 >gi|212633150|ref|YP_002309675.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3] gi|212554634|gb|ACJ27088.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3] Length = 184 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 14/161 (8%) Query: 55 GPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113 G YAG ++ + + GYN +G+EG + T + + + Sbjct: 28 GAYAGGQIGAFSADLEGGSESGQSYGAYGGYNF---NEWFGLEGALYLTNDFIDEGEATA 84 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 + + S + + ++D+ LY VG A +I +G T G GV ++ Sbjct: 85 NALSFSAAPKFTWVINDTFSLYGKVGIASAAIVIESALPDIDYTGVGLTYGAGVNA-AIT 143 Query: 174 ESLVARLEYRAS---------KYSKVEGFYNTISLGVGMKF 205 E L RL Y + ++ ++LG+ +F Sbjct: 144 EKLTVRLGYDFMSATLESDDFDLPDADVEFSNVTLGMHYQF 184 >gi|46251212|gb|AAS84577.1| truncated Omp25b [Brucella canis] Length = 120 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 10/72 (13%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDS-CI 91 V +NG Y G Y + + G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90 Query: 92 MYGVEGDVRYTV 103 + GV+GD+ Y Sbjct: 91 VLGVDGDITYND 102 >gi|310816897|ref|YP_003964861.1| outer membrane protein [Ketogulonicigenium vulgare Y25] gi|308755632|gb|ADO43561.1| outer membrane protein [Ketogulonicigenium vulgare Y25] Length = 237 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 56/186 (30%), Gaps = 28/186 (15%) Query: 40 TIATNRYVPIR--HDFNGPYAGLSALY------------------NGSFGEEAHHNAGGS 79 V + F G Y GL + G G+ Sbjct: 33 EAPVVIPVAPVLTNRFAGGYVGLGYGHVVSSDDRVGMVDQTTNLLTGVLGDLDLEGGAAI 92 Query: 80 IFAGYNVEDSCIMYG----VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 + AGY + ++YG V G S +LR GY V+ SLLLY Sbjct: 93 LQAGYRWANGNLVYGPTLRVRGGGIDAELTGTSTGSSTVNWEAALRGNLGYTVTPSLLLY 152 Query: 136 ATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 VG A+ T G AG+G E L+++ EY + Y Sbjct: 153 GFVGYTYAEVEYDVAGAINVAETVNFGGVNAGLGAEY-ALNDNWSLFGEYEYAGYEGKNL 211 Query: 193 FYNTIS 198 I+ Sbjct: 212 VDPAIN 217 >gi|254693693|ref|ZP_05155521.1| porin [Brucella abortus bv. 3 str. Tulya] Length = 81 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 16/74 (21%) Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE--------------- 191 + G AG GV+ +++++ RLEYR + Y + Sbjct: 9 IESIGVSQSKTMTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNK 67 Query: 192 GFYNTISLGVGMKF 205 + I LGV KF Sbjct: 68 FKTHDIRLGVAYKF 81 >gi|161347191|gb|ABX65299.1| 31 kDa bacteriophage-associated heme binding protein [Bartonella vinsonii subsp. berkhoffii] Length = 182 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 62/186 (33%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63 S +AL S +AQAAD V V P ++ P + G Y G Sbjct: 2 SVIALISTSTAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVK 56 Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112 N FG++ G I+ G N+E ++ GVE D + + + Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDTKTLSTK 116 Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133 G+ R R G+ ++ ++ Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176 Query: 134 LYATVG 139 Y G Sbjct: 177 PYFAGG 182 >gi|126735153|ref|ZP_01750899.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2] gi|126715708|gb|EBA12573.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2] Length = 230 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 60/190 (31%), Gaps = 32/190 (16%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSA--------LYNGSFGEEAHHNAGG--------SI 80 V+ T D++G Y G + ++ + G Sbjct: 15 VIAASPTALVADQPFDWSGTYGGFNLDLADPILSGIQDCCADDPGDDPGNLDPSAVALGG 74 Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLAD-------NIHSLHGIG--GSLRIRGGYEVSDS 131 G+N+ + +YGVEG Y V + S I GSLR R G D+ Sbjct: 75 HFGFNIVQNQWVYGVEGAFFYGGLVDSQLSQSEPIANESDIDINGIGSLRGRIGRIAGDA 134 Query: 132 LLL------YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 ++ YA + G G G G+++ L+E+ AR+ Y Sbjct: 135 MVFGILGASYADATYTMRDPDAANSKGSADLSGWGYMIGAGIDLP-LTENTSARVSYERH 193 Query: 186 KYSKVEGFYN 195 + + Sbjct: 194 IFDTRVATDD 203 >gi|220922032|ref|YP_002497333.1| porin [Methylobacterium nodulans ORS 2060] gi|219946638|gb|ACL57030.1| porin [Methylobacterium nodulans ORS 2060] Length = 294 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 49/183 (26%), Gaps = 57/183 (31%) Query: 51 HDFNGPYAGLSALYN-----------------------------GSFGEEAHHNAGGSIF 81 + G YAG + Y G G Sbjct: 40 FTWTGFYAGFNVGYGFDASDNRGPTVIGVGPATGLVPPGATAVIAFTGNRNLEGFVGGGQ 99 Query: 82 AGYNVED---SCIMYGVEGDVRYTV-----------------------PVLADNIHSLHG 115 GYN + S ++ G+E D ++ V N + Sbjct: 100 VGYNYQFTPGSGVVVGIEADAQFADFGRDRNRFIVATNPAALGGVAAQQVFNPNGLAGLD 159 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSE 174 G++R R GY D +L Y T G G TAG G+E ++ Sbjct: 160 WFGTVRGRLGYAF-DRVLFYGTGGFAYGGGGGRDFGLPNRDDFQTGWTAGGGIEYALPTD 218 Query: 175 SLV 177 S + Sbjct: 219 SFL 221 >gi|51320045|gb|AAU00343.1| Pap31 [Bartonella phage CO-04-1] Length = 186 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 54/184 (29%), Gaps = 62/184 (33%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--------- 63 +AL S +AQAAD V V P ++ P + G Y G Sbjct: 2 IALISTSAAQAADIVIPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVEIT 56 Query: 64 ----YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS--- 112 N FG++ G I+AG N+E ++ GVE D + + + Sbjct: 57 DSGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDTKTLSTKEL 116 Query: 113 -------------------------------------LHGIGGSLRIRGGYEVSDSLLLY 135 G+ R R G+ ++ ++ Y Sbjct: 117 EGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIMPY 176 Query: 136 ATVG 139 G Sbjct: 177 FAGG 180 >gi|92116695|ref|YP_576424.1| hypothetical protein Nham_1117 [Nitrobacter hamburgensis X14] gi|91799589|gb|ABE61964.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 274 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 96/286 (33%), Gaps = 93/286 (32%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L LA ++ + A AAD G ++ + +R + G Y G Sbjct: 1 MRRLLLA----AVMCGTAHGAYAADMPDLPILRGSL------SDGFGTVRTVWQGYYVGG 50 Query: 61 SALYNGS--------------------------------FGEEAHHNAGGSIFAGYNVED 88 A S G+ + G F GYN + Sbjct: 51 QAGVGESDMNFTGATRNVAARLLSGTAIENSGQVSSWPLGGKASVRGDGWGGFVGYNSQW 110 Query: 89 SCIMYGVEGD---------------------VRYTVPVLADNIHSLHGIG-GSLRIRGGY 126 ++ GVE + + YT V + ++ G+LR R GY Sbjct: 111 DDVVIGVEANYMHGKFGGSRSDSMSRFFTDSLGYTDGVTYQSTATMSISDMGTLRARAGY 170 Query: 127 EVSDSLLLYATVGPDVAQKY--------------------------ETGKAGEITPIAIG 160 V + L Y G + Q +G G+ + + G Sbjct: 171 -VVGAFLPYMFGGVALGQADIVRSAHIFGTQVNPAAAPGFTNVPFNVSGTDGKYSHLIYG 229 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKY-SKVEGFYNTISLGVGMKF 205 +AGVG++V L L AR+E+ ++ S ++ NT+ GVG KF Sbjct: 230 YSAGVGLDVN-LIGGLFARVEWEYIRFTSSIDTNVNTVRAGVGYKF 274 >gi|260574728|ref|ZP_05842731.1| putative outer membrane protein [Rhodobacter sp. SW2] gi|259023145|gb|EEW26438.1| putative outer membrane protein [Rhodobacter sp. SW2] Length = 213 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 71/204 (34%), Gaps = 28/204 (13%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL--------YNGSFGE 70 +AQA PV A V T+ D++G YAGL N Sbjct: 21 TAAQAGGPVVVAEEPQLAYVQTVQQ-----PTADWSGFYAGLGYGVSSGDIDFTNPDVAN 75 Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130 + S F GY V+ ++YG E L+ + GY ++ Sbjct: 76 KLDDGHAASAFVGYLVQRDALVYGAELAYTGLDKNTVTGFADEIDQTIDLKGKVGYA-AN 134 Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY--- 187 L Y +G VA G P + G+G++ +++ + LEY A Sbjct: 135 RALFYGVLGYSVA--SFDTAGGSWDPAGVNY--GLGMDYL-VTDRMTVGLEYLARDLTGD 189 Query: 188 ------SKVEGFYNTISLGVGMKF 205 + + +T+SL VG +F Sbjct: 190 NPDGLGQQAKIDLDTVSLRVGFQF 213 >gi|296447763|ref|ZP_06889678.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b] gi|296254740|gb|EFH01852.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b] Length = 723 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 66/228 (28%), Gaps = 76/228 (33%) Query: 48 PIRHDFNGPYAGLSAL-----YNGSFGEEAHH-------------NAGGSIFA---GYNV 86 P + G + G+ A +G E A + G F GY+ Sbjct: 26 PPIFSWAGLHLGVDAGVGLPVASGGRVEAAAGLSPTAHALIAPGRDRAGVSFGARIGYDW 85 Query: 87 EDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGG----------------SLRIRGGYEVS 129 + +YG+E ++ + + D + + G G S+R R GY Sbjct: 86 QKGPWVYGLESELNFLDLRRGDDGVFAGFGALGAATRRLTTQENGQYVASVRGRLGYAFG 145 Query: 130 DSL----------------LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 +L LL T G A + G GVE L Sbjct: 146 RTLVYAAAGVAAGGWRGASLLTVTPGVAGP-----FFAPVSDSSRMKFVIGAGVE-QALF 199 Query: 174 ESLVARLEYRA----------SKYSKV------EGFYNTISLGVGMKF 205 + ARLEY YS + + LG+ +F Sbjct: 200 DRWSARLEYTYVNQQLQIRHFDDYSSSAFDVRQRSEAHLLRLGLDYRF 247 >gi|255262225|ref|ZP_05341567.1| outer membrane protein [Thalassiobium sp. R2A62] gi|255104560|gb|EET47234.1| outer membrane protein [Thalassiobium sp. R2A62] Length = 194 Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 21/187 (11%) Query: 27 VRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL-----SALYNGSFGEEAHHNAGGSI- 80 + + VP +A+ D+ G YAGL + + GSI Sbjct: 2 AQAGNLEEVIDVPPVASIVTPAEVSDWTGFYAGLQFDAVAGKTERDSLSSFKADLEGSIV 61 Query: 81 --FAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG------IGGSLRIRGGYEVSDSL 132 F GY + G E D+ G I +LR G + Sbjct: 62 SGFVGYRWAVGRYIVGAELDIALNGDGRMIYTEGGLGPERPYDINSALRFGGEFGGELGG 121 Query: 133 LL-YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 L Y +G + + + G G+G + +++S++ +E + +++ Sbjct: 122 GLAYMGLGFTMLDVKLDSEFDDQ-----GYYVGIGYDY-FVTDSIMVGVEINYHDFGELD 175 Query: 192 GFYNTIS 198 G + ++ Sbjct: 176 GASDRVT 182 >gi|188580104|ref|YP_001923549.1| porin [Methylobacterium populi BJ001] gi|179343602|gb|ACB79014.1| porin [Methylobacterium populi BJ001] Length = 254 Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 54/171 (31%), Gaps = 34/171 (19%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--------------GYNVE---DSCIMY 93 + G Y G +A Y G + +A GYN + S + Sbjct: 50 FTWTGFYVGANAGYGFRGGSSRYSDATYGTVTESGGKGGFVGGGQIGYNYQITPGSGWVL 109 Query: 94 GVEGDVRYTVPVLAD----------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 G E D++ T + G+LR R GY D L+Y T G Sbjct: 110 GAEADLQATGFGRRGDGTVGATPYYGVAPSLDWYGTLRGRVGYAF-DRWLVYGTGGFAYG 168 Query: 144 QKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + A +G AG G+E L++ + ++E K Sbjct: 169 GGSRSPYASAYPYTLPDTTRLGYAAGAGIEY-ALTDHVSVKVEGLYVDLGK 218 >gi|87199324|ref|YP_496581.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM 12444] gi|87135005|gb|ABD25747.1| hypothetical protein Saro_1303 [Novosphingobium aromaticivorans DSM 12444] Length = 185 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 12/143 (8%) Query: 54 NGPYAGLSALYN--GSFGEEAH---HNAGGSIFAGYNVEDSCIMY-GVEGDVRYTVPVLA 107 G Y G+ ++ S G++ + GG++FAGYN + + +Y GVE + + Sbjct: 24 AGAYVGVGVTHDNLASSGDDEGVGINGVGGTVFAGYNFDLTSSVYAGVEANFDLATAKIG 83 Query: 108 DN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 D+ + + + GGS G+ SDS LY VG + T E + A G G Sbjct: 84 DDTDSLEADYAFGGS--ALLGFRPSDSTALYGRVGYQRGRGTLTVDGTEYSDSADGLRLG 141 Query: 165 VGVEVGGLSESLVARLEYRASKY 187 +G++ L+E L R+EY + Y Sbjct: 142 LGLQAD-LTEKLGVRVEYNHTHY 163 >gi|146338464|ref|YP_001203512.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278] gi|146191270|emb|CAL75275.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278] Length = 549 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 13/135 (9%) Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG------SLRIR 123 + G + G + + + G++ ++ + + + +R Sbjct: 376 SSNGSDVVGGLQLGCDYQLDRFVVGIQAMADLGNINVSGPLAPGLTLNTRTSNLYTATVR 435 Query: 124 GGYEVSDSLLLYATVGPDVAQ---KYETGKAGEITPIAI---GGTAGVGVEVGGLSESLV 177 GY V+ +L Y G + G+ +A G T G GVE + + Sbjct: 436 AGYLVTPEILAYVRGGAAWTRTTVGVANTATGQSASVAFNRSGWTVGAGVE-WMFARNWS 494 Query: 178 ARLEYRASKYSKVEG 192 A EY + + G Sbjct: 495 AFAEYDYADFGTATG 509 >gi|113968601|ref|YP_732394.1| OmpA domain-containing protein [Shewanella sp. MR-4] gi|114049252|ref|YP_739802.1| OmpA domain-containing protein [Shewanella sp. MR-7] gi|113883285|gb|ABI37337.1| OmpA domain protein transmembrane region-containing protein [Shewanella sp. MR-4] gi|113890694|gb|ABI44745.1| OmpA domain protein transmembrane region-containing protein [Shewanella sp. MR-7] Length = 185 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 17/177 (9%) Query: 41 IATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 D G Y G + +++ G ++ GYN +G+E + Sbjct: 14 ALVAGQASAATDNTGFYVGGALNRVTVDAFDDSETGTGFGVYGGYNF---NEWFGLEANF 70 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 T + ++ G + + +++D YA VG G + Sbjct: 71 FATADLGDSDVDISAG-ALTFTPKFTLQINDMFSAYAKVGVASMAVNVDGLGFDEDFTGF 129 Query: 160 GGTAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205 G T GVGV ++E L RL Y ++ +++GV +F Sbjct: 130 GWTYGVGVNA-AVTEHLNVRLSYDITTGDLDADHSYLNMKDIDTDMKQLAIGVHYQF 185 >gi|126734487|ref|ZP_01750234.1| outer membrane protein, putative [Roseobacter sp. CCS2] gi|126717353|gb|EBA14217.1| outer membrane protein, putative [Roseobacter sp. CCS2] Length = 175 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 17/163 (10%) Query: 50 RHDFNGPYAGLSALYNG----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105 D+ GPYAG + E IFAGYNV++ I+YG E D T Sbjct: 21 AQDWTGPYAGFQIGGSDIDVDGAAELTGDGPSYGIFAGYNVQNGAIVYGGEIDYDVTEYE 80 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 +A L+ R G E+ L Y T G A + G+ G GV Sbjct: 81 IAGGAQ-EVDSTTRLKGRIGTELGGG-LAYGTAGVVWA---TSPGLGDD----NGYLVGV 131 Query: 166 GVEVGGLSESLVARLE---YRASKYSKVEGFYNTISLGVGMKF 205 G ++ +++++ E + Y+ + + + F Sbjct: 132 GYDLP-VTQNMTVGAEILQHEFEDYNDTDLDVGVTTFKARVSF 173 >gi|218532663|ref|YP_002423479.1| porin [Methylobacterium chloromethanicum CM4] gi|218524966|gb|ACK85551.1| porin [Methylobacterium chloromethanicum CM4] Length = 243 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 52/172 (30%), Gaps = 34/172 (19%) Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHNAGGSI--------------FAGYNVE---DSCIM 92 + G Y G +A Y ++ +A GYN + S + Sbjct: 38 VFTWTGFYVGANAGYGFRGSSSSYTDATYGTVIESGGKGGFVGGGQIGYNYQLTSGSGWV 97 Query: 93 YGVEGDV-RYTVPVLAD---------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 G E D T D + G++R R GY D L+Y T G Sbjct: 98 LGAEADFQGMTFGRRGDGTIGTTPYHGVAPSLDWFGTVRGRLGYAF-DRWLVYGTGGFAY 156 Query: 143 AQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + A +G G GVE L+E + ++E K Sbjct: 157 GGGSASPYATSYPYTLPDTTRLGYAVGGGVEY-ALTEHISVKVEGLYVDLGK 207 >gi|85715495|ref|ZP_01046476.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A] gi|85697690|gb|EAQ35566.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A] Length = 257 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 55/188 (29%), Gaps = 34/188 (18%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSALYNGSF--------------GEEAHHNAGG--SIF 81 T A + +D++G Y G + + S E H GG Sbjct: 30 TYTKAPPPMMAAIYDWSGFYIGANGGWGSSRNCWNFTTPAGAFVANEGCHDATGGTAGGQ 89 Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADN--------IHSLHGIGGSLRIRGGYEVSDSLL 133 GY + + ++G+E + S G G + GY D+ L Sbjct: 90 IGYRWQSTNWVFGLEAQGNWADLSGRRASLAFPAFTNDSHLGAFGLFTGQIGYAW-DATL 148 Query: 134 LYATVGPDVAQKYETGKA--------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 LY G V A ++ G T GVG+E G + + EY Sbjct: 149 LYVKGGAAVTSNRYRSLATLTGAQVTNDVNNSRWGATVGVGLEY-GFAPNWSLAFEYDHI 207 Query: 186 KYSKVEGF 193 Sbjct: 208 FMGNSRTT 215 >gi|170747711|ref|YP_001753971.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170654233|gb|ACB23288.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 288 Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 48/183 (26%), Gaps = 59/183 (32%) Query: 53 FNGPYAGLSALYNGS----------------------------FGEEAHHNAGGSIFAGY 84 + G Y G++A Y + G GY Sbjct: 41 WTGFYVGVNAGYGFDANSRNTTSYALPGGSLINSPGTAGVVSVSNRNNNDGFSGGAQIGY 100 Query: 85 NVED---SCIMYGVEGDVRY------------------------TVPVLADNIHSLHGIG 117 N + S ++ G E D +Y P + Sbjct: 101 NYQFTPGSGVVIGFEADAQYVDFARRANATQNYSFLGFPGVAFSNPPAFVATSGNGLDYF 160 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI---TPIAIGGTAGVGVEVGGLSE 174 G++R R GY D L+Y T G + G AG GVE ++ Sbjct: 161 GTVRGRLGYAF-DRTLVYGTGGFAYGSGQDDQNFAGNRFRDSFRTGWAAGGGVEYALPTD 219 Query: 175 SLV 177 S + Sbjct: 220 SFL 222 >gi|66934588|gb|AAY58303.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii] Length = 182 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 62/186 (33%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63 S +AL S +AQAAD V V P ++ P + G Y G Sbjct: 2 SVIALISTSAAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56 Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112 N FG++ G ++ G N++ ++ GVE D + + + Sbjct: 57 ITDSGKKNEFFGKDQTPKPSGFMGGVYTGSNIDLGNNLILGVETDAVWADRGDTKTLSTK 116 Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133 G+ R R G+ ++ ++ Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGDDEKFVAGDTGSYSFTYKEKWSGATRARIGFAAANCIM 176 Query: 134 LYATVG 139 Y G Sbjct: 177 PYVAGG 182 >gi|170747433|ref|YP_001753693.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170653955|gb|ACB23010.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 288 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 41/138 (29%), Gaps = 31/138 (22%) Query: 70 EEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIHSLHGIGGS------- 119 + G GYN + S ++ G E D +Y N + GG+ Sbjct: 86 RSNNDGFSGGAQIGYNYQFTPGSGVVIGFEADAQYVDFARRANATQNYAFGGAPGIAFAA 145 Query: 120 -----------------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI---TPIAI 159 +R R GY D L+Y T G + Sbjct: 146 PRAFVATSGNGLDYFGTVRGRLGYAF-DRTLVYGTGGFAYGSGQDDQNFAGNRFRDSFRT 204 Query: 160 GGTAGVGVEVGGLSESLV 177 G AG G+E ++S + Sbjct: 205 GWAAGGGIEYALPTDSFL 222 >gi|70931144|gb|AAZ15807.1| heme-binding protein [Bartonella vinsonii subsp. berkhoffii] Length = 182 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 54/186 (29%), Gaps = 62/186 (33%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL------- 63 S +AL S +AQAAD V V P ++ P + G Y G Sbjct: 2 SVIALISTSTAQAADIVVPHEVVSPRVTPIVS-----PSTFSWTGFYLGGQVGNFSSKVE 56 Query: 64 ------YNGSFGEEAH---HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS- 112 N FG++ G I+ G N+E +M GVE D + + + Sbjct: 57 IADSGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLMLGVETDAVWADRGDTKTLSTK 116 Query: 113 ---------------------------------------LHGIGGSLRIRGGYEVSDSLL 133 G+ R R G+ ++ ++ Sbjct: 117 ELEGDDLEDFNNTFTDAGIKLGGDEKFVVGDTGSYSFTYKEKWSGATRARTGFAAANCIM 176 Query: 134 LYATVG 139 Y G Sbjct: 177 PYVAGG 182 >gi|24375951|ref|NP_719994.1| outer membrane protein, putative [Shewanella oneidensis MR-1] gi|24350939|gb|AAN57438.1|AE015879_8 outer membrane protein, putative [Shewanella oneidensis MR-1] Length = 188 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 7/157 (4%) Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 D G Y G + ++A G ++ GYN +G+E ++ Sbjct: 16 VAGQALAATDTTGFYVGGALNRVTVDVLDDAETGTGFGVYGGYNF---NEWFGLEANLFA 72 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161 T + ++ G + + +++D YA VG G + G Sbjct: 73 TGDLGDKDVDISAG-ALTFTPKFTLQINDMFSAYAKVGVASMAMNVDGDGFDEDFTGFGW 131 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTIS 198 T GVGV ++E L RL Y + ++ ++ ++ Sbjct: 132 TYGVGVNA-AVTERLNVRLSYDVTS-GDLDADHHYVN 166 >gi|21106560|gb|AAM35363.1| membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 474 Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 33/173 (19%) Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 G G +A + + GG+ + GY+ + +YGV + YT + D++ Sbjct: 272 GFCGGAAAG--RTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAE--YTRNDVRDSVS 327 Query: 112 S------------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETG 149 + +LR R GY L Y T G + Sbjct: 328 AFSTTPAFYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANS 387 Query: 150 KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 A G AG+G++ LS+ + +EY ++ + + +G G Sbjct: 388 FTSSGGDSADGYQAGIGLQ-RRLSDKVSVGVEYLFTRLQDDDT---RVRVGPG 436 >gi|12620578|gb|AAG60854.1|AF322012_159 ID352 [Bradyrhizobium japonicum] Length = 620 Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 55/227 (24%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L +G +++A+A+ ++ A + GR +P P +++G Y G Sbjct: 57 MRSRVLFLGAATMAIATTGTSMA--------NLGREALP--------PSVWNWSGGYIGG 100 Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVEDSCIMYGVEGD--------- 98 + + GYN +++ +YG+E D Sbjct: 101 HVGGGYGRTSFTNPFGPPIYGDVVDIPSFVAGGQIGYNWQNNSWVYGLELDASAAVASGS 160 Query: 99 ---VRYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSLLLYATVGPD----VAQKYETG 149 + + +++ N ++ + + R GY L Y G Sbjct: 161 NTCLAASDLIVSANCNAAPNLFATGTGRIGYAFGSLGQTLAYLKAGAAWQNNRGDIVNNF 220 Query: 150 KAGE--ITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + G+ +GG G+GVE L+ S +EY + Sbjct: 221 EGGDLPQEKTHFDYGQVGGVIGLGVE-QALTPSWSVNVEYDYLHFGG 266 >gi|170745396|ref|YP_001766853.1| putative outer membrane protein [Methylobacterium radiotolerans JCM 2831] gi|170658997|gb|ACB28051.1| putative outer membrane protein [Methylobacterium radiotolerans JCM 2831] Length = 577 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 61/222 (27%), Gaps = 63/222 (28%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH------------------------ 74 P N VP + G YAGL Y GS Sbjct: 25 PIARLNYPVPPIFSWTGAYAGLFTGY-GSLDSNTKFICTAPGRQAGAPECPILPSRRASD 83 Query: 75 -NAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHG-IGGSL----------- 120 + G GYN + ++ G D ++T + GS+ Sbjct: 84 ASFIGGGEVGYNWQTPSGLVAGAAADYQFTRLWGYGRQEGDFKTVDGSVFFDSVAHSGQR 143 Query: 121 -------RIRGGYEVSDSLLLYATVGPDVAQKYETG---------------KAGEITPIA 158 R + G+ V D +Y T G V G + Sbjct: 144 LDDLATFRGKIGFSV-DQTFIYVTGGLAVGHVRIDNNLNLSIKPDAAPAAAFDGRGGAVR 202 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 +G AG+G+E SE L A++E + S G Sbjct: 203 LGYVAGMGIE-HAFSERLSAKVEGLYYNLGSRAVVPDQTSGG 243 >gi|46251216|gb|AAS84579.1| truncated Omp25b [Brucella pinnipedialis] Length = 102 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 10/72 (13%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG---------GSIFAGYNVEDS-CI 91 V +NG Y G Y + + G ++AGYN + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNF 90 Query: 92 MYGVEGDVRYTV 103 + GV+GD+ Y Sbjct: 91 VLGVDGDITYND 102 >gi|149184388|ref|ZP_01862706.1| outer membrane protein-like protein [Erythrobacter sp. SD-21] gi|148831708|gb|EDL50141.1| outer membrane protein-like protein [Erythrobacter sp. SD-21] Length = 200 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 30/165 (18%) Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI---------HSLHGIGGSL 120 +++ + AGY+ + ++ G+E + + ++ + G L Sbjct: 37 DQSIDGLAYGVGAGYDFDAGGVVLGLEAEYVGSTAETEYDMGDFEDIGVGNVETGRDLYL 96 Query: 121 RIRGGYEVSDSLLLYATVGPD-VAQKYETGKAGEITPIAI---GGTAGVGVEVGGLSESL 176 R G + +D LL+YA G + + + G G G+E LS + Sbjct: 97 GARVGVKANDDLLVYAKGGYTNATYNFRNNDGTNEYEVDLDTDGFRVGGGLEY-ALSGNT 155 Query: 177 VARLEYRASKYS----------------KVEGFYNTISLGVGMKF 205 A++EYR S YS ++ + + G GM+F Sbjct: 156 FAKVEYRYSNYSDAELDFEGDAPDVAVPDIDLDRHQVMAGFGMRF 200 >gi|100913602|gb|ABF69692.1| Pap31 hemin-binding protein [Bartonella henselae] Length = 181 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 52/189 (27%), Gaps = 69/189 (36%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 S +AL S +AQAAD + V +A + G Y G S E Sbjct: 2 SVIALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQVGNFSSKVE 52 Query: 71 EAH----------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTV---------- 103 G I+AG N++ ++ GVE D + Sbjct: 53 ITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAE 112 Query: 104 ---------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130 D++ G+ R+R G+ +D Sbjct: 113 AIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAAD 172 Query: 131 SLLLYATVG 139 ++ Y G Sbjct: 173 RIMPYVAGG 181 >gi|146341078|ref|YP_001206126.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] gi|146193884|emb|CAL77901.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278] Length = 259 Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 67/226 (29%), Gaps = 44/226 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG- 59 M+ LF A A+ + AAD + T A + +D+ G Y G Sbjct: 2 MKTLFGAAAGLGAMAAATST-FAADLP------VKKGPYTKAPPAVMATVYDWGGFYVGF 54 Query: 60 -LSALYNGSFGEEAHH------------------NAGGSIFAGYNVEDSCIMYGVEGDVR 100 + + A GY + + ++GVE Sbjct: 55 NAGGGSSRDCWNLVSNAGVAVNPAANREGCSGGGGAAVGGQIGYRYQMANWVFGVEAQGD 114 Query: 101 YTVPVLADNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATVGPD-VAQKYETGKA 151 + + L + R + GY D++L+Y G V +Y+T Sbjct: 115 WANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAF-DNILVYFKGGAAVVGDRYDTFTT 173 Query: 152 GEI------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 G GGT G G+E G + + +EY Sbjct: 174 GTNVMLDRANTTRWGGTVGAGLEY-GFAPNWSVGIEYDHIFLGNKN 218 >gi|212633149|ref|YP_002309674.1| outer membrane protein [Shewanella piezotolerans WP3] gi|212554633|gb|ACJ27087.1| Outer membrane protein, putative [Shewanella piezotolerans WP3] Length = 184 Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 14/173 (8%) Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 + Y D G Y G ++ ++ + GYN +G+EG + Sbjct: 16 ASAYASAETDRVGAYVGGQIGAFSADVEGDSESGQSYGAYGGYNF---NEWFGLEGTIYL 72 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161 T + + S++ S+ + ++D+ LY +G ++ G Sbjct: 73 TNDFVDNEYASVNAASFSVAPKFTLVLNDTFSLYGKIGLASVAVVTDTFIRDVDYQGFGL 132 Query: 162 TAGVGVEVGGLSESLVARLEYRAS-------KYS--KVEGFYNTISLGVGMKF 205 T G GV +++ L RL Y + + ++ + ++LG+ +F Sbjct: 133 TVGAGVNA-AVTDKLNIRLGYDFTSAELDSDDFGAQDIDMDLSNVTLGMHYQF 184 >gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12] gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12] Length = 335 Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 24/179 (13%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 D + Y G + + +++ FAGY + + D Sbjct: 11 EASKVQDDSFFYLGAKGGWINYQNACEAQAVDCDANDSAWGGFAGYQFHRNWAVETGYND 70 Query: 99 VRYTVPV------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152 V L + I ++ G SL+ ++++L L+ G +G Sbjct: 71 FGQAGAVYPESGLLNEYIGTMKGWEFSLKGNL--PLTENLDLFGKAGTLRWDGENSGPFS 128 Query: 153 EITPIAIGGT--AGVGVEVGGLSESLVARLEYRASKYSKVE----GFYNTISLGVGMKF 205 + G + G+G+E L+ S VAR+EY+ + + SLG+ +F Sbjct: 129 YDSD--DGWSPMVGIGLEY-KLTPSWVARVEYQYFDSVGSDKLGGSNMHFTSLGLSYRF 184 >gi|170745394|ref|YP_001766851.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170658995|gb|ACB28049.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 288 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 49/183 (26%), Gaps = 59/183 (32%) Query: 53 FNGPYAGLSALYNGSFG----------------------------EEAHHNAGGSIFAGY 84 + G Y G++A Y +++ G GY Sbjct: 41 WTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVVSVNNRSSNNGFSGGAQIGY 100 Query: 85 NVE---DSCIMYGVEGDVRYTVPVLADN------------------------IHSLHGIG 117 N + S I+ G E D +Y N + Sbjct: 101 NWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLAGTPGFAFSAPRAYVATSGNGLDYF 160 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ R R GY D L+Y T G + + G G G+E ++ Sbjct: 161 GTARGRLGYAF-DRTLVYGTGGYAYGSGQDDQNFAGRNFRSSFRNGYAVGGGIEYALPTD 219 Query: 175 SLV 177 S + Sbjct: 220 SFL 222 >gi|27376983|ref|NP_768512.1| hypothetical protein bll1872 [Bradyrhizobium japonicum USDA 110] gi|27350125|dbj|BAC47137.1| bll1872 [Bradyrhizobium japonicum USDA 110] Length = 602 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 55/227 (24%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L +G +++A+A+ ++ A + GR +P P +++G Y G Sbjct: 39 MRSRVLFLGAATMAIATTGTSMA--------NLGREALP--------PSVWNWSGGYIGG 82 Query: 61 SALYNGSFGEEAHH-------------NAGGSIFAGYNVEDSCIMYGVEGD--------- 98 + + GYN +++ +YG+E D Sbjct: 83 HVGGGYGRTSFTNPFGPPIYGDVVDIPSFVAGGQIGYNWQNNSWVYGLELDASAAVASGS 142 Query: 99 ---VRYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSLLLYATVGPD----VAQKYETG 149 + + +++ N ++ + + R GY L Y G Sbjct: 143 NTCLAASDLIVSANCNAAPNLFATGTGRIGYAFGSLGQTLAYLKAGAAWQNNRGDIVNNF 202 Query: 150 KAGE--ITPIA-----IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + G+ +GG G+GVE L+ S +EY + Sbjct: 203 EGGDLPQEKTHFDYGQVGGVIGLGVE-QALTPSWSVNVEYDYLHFGG 248 >gi|94495792|ref|ZP_01302371.1| outer membrane protein-like [Sphingomonas sp. SKA58] gi|94424484|gb|EAT09506.1| outer membrane protein-like [Sphingomonas sp. SKA58] Length = 169 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 12/154 (7%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH 111 F GP AG++ Y+ GE+ + AGY++ I+ GVE + V + Sbjct: 27 FTGPRAGVTMGYDKIGGED---GFAYGVTAGYDLALAPRIVGGVEVSLG-DTTVDDSGLD 82 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 I SLR GY V+ +L + VG + G + + G G+E Sbjct: 83 VSRDIAASLRA--GYVVTPRVLAFGKVGYASTRFEFDGDGAGLEGVRYG----GGLEFAA 136 Query: 172 LSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + + EY+ ++Y + G + +GVG +F Sbjct: 137 -TPNTYISAEYQRTEYEQNVGGRDAAMVGVGFRF 169 >gi|294677984|ref|YP_003578599.1| hypothetical protein RCAP_rcc02462 [Rhodobacter capsulatus SB 1003] gi|294476804|gb|ADE86192.1| membrane protein, putative [Rhodobacter capsulatus SB 1003] Length = 209 Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 78/222 (35%), Gaps = 30/222 (13%) Query: 1 MQKLFLA-VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59 M+KL +A V ++SLA + V PT+A ++G YAG Sbjct: 1 MKKLSVAIVAMASLAAPALAGGLTPPVVESE--------PTVAATPAPAPVQAWDGFYAG 52 Query: 60 LSALYNGSFGEEAHHNAGG--------SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 ++ G +F GYN++ ++YG E + T L D Sbjct: 53 ITGGSVTGGGASYAPGGAAFGMGRGSYGVFGGYNLQSGALVYGGEIAAQATDFNL-DGAP 111 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 L+ R G L YA VG G+ A G G+GV+ Sbjct: 112 GKFDNMIDLKARAGMAY-GKALPYAFVGYSRGDWK--NGDGQTNGAADGMNYGLGVDY-A 167 Query: 172 LSESLVARLEYR----ASKYS----KVEGFYNTISLGVGMKF 205 +++ E ++ + V+ +NT+ + G +F Sbjct: 168 VNDKWSVGAELMRRELSTDFDGSARSVDTNFNTVQVRAGFRF 209 >gi|85704834|ref|ZP_01035935.1| possible outer membrane protein [Roseovarius sp. 217] gi|85670652|gb|EAQ25512.1| possible outer membrane protein [Roseovarius sp. 217] Length = 209 Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 20/179 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRH--------D 52 M+ L + ++LA+A+ +A+ + P + + + Sbjct: 1 MRPLLPLLATTTLAVAAPATAETPPTAFQQPVLITFDAPNDTPTASLSTQSRPTLSSSAN 60 Query: 53 FNGPYAGLSALYNGSFGEEAHHN--AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 + G Y G + + ++ G + GY+ + + G D + Sbjct: 61 WTGFYIGGQLGVGVVDSDISSNDEDFIGGVTFGYDHDFGRWVLGGALDYDFADINAGPGT 120 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 +++RGG ++ + LLY G +T AG G G G E Sbjct: 121 SIEEIFR--VKLRGGPKIGNG-LLYGAAGWA---NADTDTAGRDD----GWFIGAGYEY 169 >gi|209885401|ref|YP_002289258.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5] gi|209873597|gb|ACI93393.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5] Length = 225 Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 46/165 (27%) Query: 68 FGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHS-----------LHG 115 + H A G GYN + + G+EGD + + + Sbjct: 23 WPTGTHSGALGGFQIGYNYQVRPDWVIGLEGDFQLADIGGSGSTSHIVPGVATSASQTVR 82 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPD-----------------VAQKYETGK-------- 150 G++R R G+ +++LL+YAT G + ++ Sbjct: 83 SFGTIRARLGHVAAENLLVYATGGFAFAKINSSARFDVEPGTSGSGIFDINGVRYTSLCG 142 Query: 151 --------AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 AG +A G T G G E L + EY +++ Sbjct: 143 GPNPNVCYAGSSRGMAPGWTIGGGFEY-ALGPRWSLKGEYLYARF 186 >gi|332701600|ref|ZP_08421688.1| putative outer-membrane protein [Desulfovibrio africanus str. Walvis Bay] gi|332551749|gb|EGJ48793.1| putative outer-membrane protein [Desulfovibrio africanus str. Walvis Bay] Length = 217 Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 57/173 (32%), Gaps = 28/173 (16%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSAL---------YNG---SFGEEAHH-NAGGSIFAGY 84 +P +A P F+G Y G Y+G F ++A ++ G Sbjct: 16 LPVMAHAGSTP----FDGFYIGAKVGNESYQIDVEYDGPSNDFEDDADDSGFVAGVYLGN 71 Query: 85 NVEDSCIMY-GVEGDV---RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP 140 + Y G E D N L+ R G ++D LLY G Sbjct: 72 GRAIKDVFYLGWEVDAMTHNMEGSFSGGNESLDMNWSLGLKARLGGVIADRNLLYGLAGV 131 Query: 141 DVAQKYETGKAG------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 A G + P+ G T G G E +++ L+AR E + Y Sbjct: 132 RFASFDYRNDTGYILDDEDENPVLPGFTLGGGYEF-AITDHLIARAEVTYTAY 183 >gi|329905096|ref|ZP_08274021.1| hypothetical protein IMCC9480_2393 [Oxalobacteraceae bacterium IMCC9480] gi|327547723|gb|EGF32502.1| hypothetical protein IMCC9480_2393 [Oxalobacteraceae bacterium IMCC9480] Length = 199 Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 20/185 (10%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGS---------FGEEAHHNAGGSIFAGYNVE-DS 89 +F G AG++A Y + +G + GS+ Y + Sbjct: 16 APQAFAQTAQSRNFEGFSAGINANYAKTRATARFGNQYGSTDDTSTNGSVQGAYGFALND 75 Query: 90 CIMYGVEGDVRYTVPVLA--DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 + GV + + + S+ + GY ++++ L+Y + + Sbjct: 76 KFVMGVGATAGFGDLDAGSFNGVSVKAKDMYSIYVEPGYRMTNTTLVYGKLSYQRMKGEL 135 Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-------VEGFYNTISLG 200 +G + G GVGV +S + E Y +E ++G Sbjct: 136 SGAGTSTSDTFDGYGIGVGV-RSMISNKFYVQAELSELDYGSESVRGIEIEPKQTVGTIG 194 Query: 201 VGMKF 205 VG KF Sbjct: 195 VGYKF 199 >gi|159042840|ref|YP_001531634.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12] gi|157910600|gb|ABV92033.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12] Length = 216 Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 61/209 (29%), Gaps = 17/209 (8%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY---- 64 + A + + + V P + P + G Y G Y Sbjct: 13 MFRTATAFGLVLAASTGSLYAGNPEPAPVAPVMVAPVPAPAPF-WAGGYIGAQLGYAYGD 71 Query: 65 ----NGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIGGS 119 G++ G + AGY + G E + + ++ Sbjct: 72 FDIDAAIDGDDNDDGFIGGLTAGYLFDVGSGWYVGPEVQYDWADLEITEDGGDTASFDEI 131 Query: 120 LRIR--GGYEVSDSLLLYATVGPD-VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 R++ G E+ + LLY T G + I G+G + + ++ Sbjct: 132 ARLKLIVGREIGNG-LLYGTAGIAYGSLDSAGDVFDGIDGSDTNWLLGLGYDYR-VGDNW 189 Query: 177 VARLEYRASKYSKVEGFYNTISLGVGMKF 205 EY + V+ NT+ + +F Sbjct: 190 TVGGEYMYHSFDDVDL--NTLHIKAAYRF 216 >gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565] gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565] Length = 345 Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 16/157 (10%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105 Y + ++ Y G+ + G E + G +F GY + + G+E Y Sbjct: 28 YGGAKLGWSNFY-GIDESNALTLGNETNDALGAGVFGGYQINKN---LGLELGYDYLGNY 83 Query: 106 LADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158 D + ++ + G+ V+D+L LY VG + Sbjct: 84 KYDATTAAGAFSDEVKAQLAQLTLKLGFPVTDNLDLYGRVGGGYGWADTKSDVYKDDSRF 143 Query: 159 IGGTAGV-GVEVGGLSESLVARLEYRASK-YSKVEGF 193 + G G E + ARLEY+ + Y + Sbjct: 144 V--MVGALGAEYAFNLD-WAARLEYQYTTPYGSRDDT 177 >gi|323137766|ref|ZP_08072842.1| porin [Methylocystis sp. ATCC 49242] gi|322397063|gb|EFX99588.1| porin [Methylocystis sp. ATCC 49242] Length = 337 Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 56/194 (28%), Gaps = 62/194 (31%) Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDV---------RYTV-- 103 Y GL A +G+ + GG GYN + I+ GVE D+ YT Sbjct: 86 GYGGLMAANSGNASLNQNGFIGGG-QIGYNYQWSPTIVIGVEADMQGSAIRGSGGYTGVG 144 Query: 104 ------------------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 V I + G++R R GY V+ +LL++ T G Sbjct: 145 QDLYSMGRMMLMPHGTRNSVGGGTIQAGLDWFGTVRGRVGYLVTPTLLVFGTGGLTYGGA 204 Query: 146 YETG------------------------------KAGEITPIAIGGTAGVGVEVGGLSES 175 + G +G + +G AG G E + Sbjct: 205 WANGNYTSTSAWCGTPTDACYGGMITTPYSQIAVGSGRTSSTLVGWNAGGGFE-WMFMPN 263 Query: 176 LVARLEYRASKYSK 189 + E Sbjct: 264 WSLKAEAFYYDLGS 277 >gi|90425585|ref|YP_533955.1| hypothetical protein RPC_4110 [Rhodopseudomonas palustris BisB18] gi|90107599|gb|ABD89636.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 274 Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 81/285 (28%), Gaps = 101/285 (35%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 V V ++ L A AAD G + ++ G Y G A Y S Sbjct: 4 VVVGAMLLTVAQEAYAADMPFLRGSVLDGPSRVV----------NWEGFYIGGQASYGTS 53 Query: 68 --------------------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGV 95 G+++ H G F GYN + + ++ G+ Sbjct: 54 DMNFTDATRGLAEQAMTNTLVNSAMQVSDWPTLGKQSAHGQGYGGFVGYNWQWTDVVLGL 113 Query: 96 EGDVRYTVPVL-----------------ADNIHSLHGIG----------GSLRIRGGYEV 128 E Y +D+++ G GS R R G+ V Sbjct: 114 EA--NYIHGKFDGSDSNVANPMTRCMGLSDSLYHCAGYRSAASIVINDLGSARARAGWSV 171 Query: 129 SDSLLLYATVGPDVAQKYETGKAGEITP---------------------------IAIGG 161 S L Y G + Q A G Sbjct: 172 -GSFLPYMFGGVSLGQADIVRSASIRDTLYTASPALGGTYVGYNQFDRAKVQNGHFIYGY 230 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205 G+GV++ L R E+ K++ V+ +T+ GVG KF Sbjct: 231 GGGLGVDMMVF-GGLFVRAEWEYLKFAAPVDTSVSTVRAGVGYKF 274 >gi|209886118|ref|YP_002289974.1| hypothetical protein OCAR_7002 [Oligotropha carboxidovorans OM5] gi|209874314|gb|ACI94110.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] Length = 493 Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAG-----------------GSIFAGYNVE-DS 89 +++ G Y Y ++ + G+I GY+ + + Sbjct: 270 SPAYNWTGFYLAGGGGYGMFSADQRSVDTTTGAITGIDTRNGGRGYFGTIAGGYDWQINP 329 Query: 90 CIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATV--- 138 + GV GD ++ + + G+ G L+ +R GY ++ + L Y Sbjct: 330 TWVVGVFGDAQF-GDIRGSLSDAGLGVTGRLKNDTNYAAGVRVGYLIAPNALSYVNGGYS 388 Query: 139 -----GPDVAQKYETGKAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYS 188 G + + G G GVE G + + EYR ++YS Sbjct: 389 HADFKGVTLTDETGLAVGSTGKSHRDGWFIGGGVENDLNFFGINAPGWFMKTEYRVAEYS 448 Query: 189 KVEG 192 + Sbjct: 449 RKTS 452 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 45/234 (19%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S +A +A AAD R V ++ G Y Sbjct: 14 MKKILLGSVALIALGSAANAADLSARYTKAPV-----------VAPVSNWTGFYVSGGFG 62 Query: 64 YNGSFGEEAHHNAG---------------GSIFAGYNVE-DSCIMYGVEGDVRYTVPVLA 107 Y ++ +G G++ GY+ + + GV GD ++ + Sbjct: 63 YGIMEADQHATTSGVASVVDTRMGGRGYFGTVGVGYDYQITPSWVVGVFGDAQW-GDIRG 121 Query: 108 DNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI-- 157 + +GI L+ R GY V+ ++L Y VG A T ++ I Sbjct: 122 SLMDLNNGITARLKNDAAYAAGARLGYLVAPNVLSYVNVGYSYASFKGTTFDDGVSTIGK 181 Query: 158 --AIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204 G G GVE G + + EYR ++Y++ Y G+ K Sbjct: 182 SHRDGWFIGGGVENDLNFFGINAPGWFMKTEYRVAEYNRRNSVYAGDIDGIAFK 235 >gi|114320656|ref|YP_742339.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227050|gb|ABI56849.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1] Length = 218 Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 14/161 (8%) Query: 44 NRYVPIRHDFNGPYAGLSALYNGSFGEEAHHN----------AGGSIFAGYNVEDSCIMY 93 + F+G Y G + G + + G + + Sbjct: 34 PATALANNAFHGVYLGGQIGWAGYDTDIETDGDSIKGLAASGVSSGVLLGTGTVNDGWYF 93 Query: 94 GVEGDVRYTVPVLADNIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQKYET-GK 150 G +G+ + + + S + R G +SD +LLY G + Sbjct: 94 GFQGNFLLNNADASLGTDADLDVEESYGIDARLGRVISDRVLLYGLAGWQRTNAELSVAG 153 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 + G G GVE +++ R+EY + Y + Sbjct: 154 VDKDDKDFDGFRFGAGVE-MATQDNVFFRIEYTQTVYGSED 193 >gi|163749836|ref|ZP_02157081.1| outer membrane protein, putative [Shewanella benthica KT99] gi|161330350|gb|EDQ01329.1| outer membrane protein, putative [Shewanella benthica KT99] Length = 183 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 22/165 (13%) Query: 55 GPYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 G Y G + G G ++ GYN DS +G+E + T + + Sbjct: 27 GFYLGGQVNNTAIEDNIGTFDESAIGFGVYGGYNFNDS---FGIEASIFATDSFVDEMDF 83 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 + + S +R + +DS+ Y G V + Y + + G G GV+V Sbjct: 84 RMAAMTISPVVR--HAFTDSVTAYLKAGLVVNRTYSDDDDVDESYQGTGWLFGAGVDVT- 140 Query: 172 LSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205 L++SL R+ Y R ++ + + G+ +F Sbjct: 141 LTQSLALRVFYEISETAPESDERDDDFADISLVQYGV--GLHYRF 183 >gi|296446617|ref|ZP_06888558.1| porin [Methylosinus trichosporium OB3b] gi|296255845|gb|EFH02931.1| porin [Methylosinus trichosporium OB3b] Length = 723 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 47/162 (29%), Gaps = 43/162 (26%) Query: 65 NGSFGEEAHHNAGGSIFAGYNVED---SCIMYGVEGD---------------VRYTVPVL 106 NGS G + GYN I+ G E D V + Sbjct: 84 NGSIDGNDGGAFLGGVQIGYNFRFDHLGGIIAGFEADLQGVAQGREMRGVSSVSRNILTR 143 Query: 107 ADNIHSLHG------IGGSLRIRGGYEVSDSLLLYATVGPDVAQ---------------- 144 D++ + G++R R G V ++L+Y T G Sbjct: 144 GDSLINTVDGGGALQFLGTVRARLGLLVDPTVLVYGTGGLAFGGVSYKFGLNSLYANAAG 203 Query: 145 --KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 A + G TAG GVE + S + EY Sbjct: 204 APAQNASAALDNLTTRSGWTAGAGVE-WMFAPSWSLKGEYLY 244 >gi|220924420|ref|YP_002499722.1| porin [Methylobacterium nodulans ORS 2060] gi|219949027|gb|ACL59419.1| porin [Methylobacterium nodulans ORS 2060] Length = 285 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 74/294 (25%), Gaps = 115/294 (39%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG------- 69 A+AAD GG P +++G Y G + + Sbjct: 2 GVTPARAADLDFGTLRGGSYDTPA--------PVGNWDGFYVGGHGGWTSTSFGFGNVFQ 53 Query: 70 -------------------------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR---- 100 + +AG N + + G E D Sbjct: 54 APVANYFRLTTYEANLSASTLLRAQDARRDGTSFGAYAGVNFQFDEFVAGAELDYTHLGV 113 Query: 101 -----------------YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 + L + ++R R GY+ + + + Y T G + Sbjct: 114 TGSTTDAIARQKVTDGYWQALSLVGEAKTRLDDYATIRARFGYD-AGNFMPYVTGGFAIG 172 Query: 144 QKYET-----------------------------GKAGEITPIAI--------------- 159 + T P + Sbjct: 173 RAQITDTVTIQARGYDQATYNSNQATGATAYVNRDGYRSFDPTNVSRSVVADPDVVQRTR 232 Query: 160 -----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 G AG G+E L+ +++ R EY+ +++ +G NT+ G +KF Sbjct: 233 EKIVGGIAAGAGMEF-ALTANILLRAEYQFVQFNDFDGHKANINTVRGGASVKF 285 >gi|144898146|emb|CAM75010.1| outer membrane protein Omp31 [Magnetospirillum gryphiswaldense MSR-1] Length = 256 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 53/206 (25%), Gaps = 54/206 (26%) Query: 45 RYVPIRHDFNGPYAGL-------------SALYNGSF--GEEAHHNAGG----------- 78 D++G Y G + Y + G Sbjct: 23 AQSAPTVDWSGFYIGGLVGATNSQTQAKTTVGYQKYLNATDARQMAQAGDSDLSQWQPSV 82 Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH----------------GIGGSLRI 122 + GY + ++ G+E + + +LR Sbjct: 83 GLVGGYGKQFGHVLLGLEASANSIYLNDERTVSENYVSTPASRFILRQSVRADWMATLRP 142 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAGVGVEVGGL 172 R G+ D+ L Y T G V Q T I G + G G E L Sbjct: 143 RLGWA-EDNWLGYVTGGLSVTQLQLDTLFVDNAFSGYSKSSDTKIRTGWSLGFGGEY-AL 200 Query: 173 SESLVARLEYRASKYSKVEGFYNTIS 198 S R EY + + ++ T S Sbjct: 201 SGGWALRGEYLYTNFGALKSMSETTS 226 >gi|148555704|ref|YP_001263286.1| opacity protein and related surface antigens-like protein [Sphingomonas wittichii RW1] gi|148500894|gb|ABQ69148.1| Opacity protein and related surface antigens-like protein [Sphingomonas wittichii RW1] Length = 188 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 54/167 (32%), Gaps = 18/167 (10%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112 F GP ++ + AGY+ + + GVE + + I S Sbjct: 26 FTGPRVEGIVGWDRVSNNGHDDAVTYGLGAGYDFQMGGAVLGVEAEA--SDSSAKSCIGS 83 Query: 113 LHGIGGSLRIRGGYEV----------SDSLLLYATVGPDVAQKYETGKAGE----ITPIA 158 L + G ++ LLYA G A+ T G + Sbjct: 84 ATAADPRLCAKAGRDLYVGGRVGTVVGGKALLYAKAGYTNARAKATLDDGTTVLRDSGNY 143 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 G G GVE L + + EYR S Y + N + G G +F Sbjct: 144 DGVRVGAGVEY-ALGTNAYVKAEYRYSNYEQ-GFSRNQVVGGFGFRF 188 >gi|300021628|ref|YP_003754239.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC 51888] gi|299523449|gb|ADJ21918.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC 51888] Length = 500 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 46/223 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + ++ ++L + +A A G G + A P ++G Y G Sbjct: 1 MKLVLGSLSAAALLCSMASAAYA--------DGPFGSLKDTAPVIEQP---TWSGVYFGA 49 Query: 61 SALYNGSFGEE---------------AHHNAGG--SIFAGYNVEDSC-IMYGVEGDVRYT 102 Y + + H GG S+ G + + + G+ GD+ + Sbjct: 50 GWGYGHNRSKNNYRDSSGDADSSSSRTEHADGGLVSLLYGADRQIGDRFVVGIFGDIDLS 109 Query: 103 VPVLADNIHSLH---GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 + ++ R G+ ++ L++AT G A ++ +I P + Sbjct: 110 DITRGNRDEHNALEIDRAWAIGARAGFLLNSRTLIFATAGYTQAH-FDNDGWWDIDPPSS 168 Query: 160 GGTA--GVGVEVGG-----------LSESLVARLEYRASKYSK 189 GT G G G L+++ R E R S ++ Sbjct: 169 PGTTLRGRGSRTFGGYFVGGGVETRLTDNFFLRGEVRYSDFAG 211 >gi|294010892|ref|YP_003544352.1| putative outer membrane protein [Sphingobium japonicum UT26S] gi|292674222|dbj|BAI95740.1| putative outer membrane protein [Sphingobium japonicum UT26S] Length = 171 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 9/154 (5%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH 111 F GP AG++ Y+ + + GY++ + +G E + L + Sbjct: 26 FTGPRAGVTLGYDKF---DGNDGFAYGASTGYDIAITPNVTFGPEVAFSDSTTSLGAGVE 82 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 + S+R GY ++ +L + VG + + + G G G+E Sbjct: 83 VSRDLSASVR--LGYILNPKVLAFGKVGYANTRVEASNSNSGGS--FEGVRYGGGLEF-A 137 Query: 172 LSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 ++ + EY+ S+Y G + +G+G +F Sbjct: 138 VTGNTYISAEYQRSEYEDGIGGRDAGVVGIGFRF 171 >gi|209886273|ref|YP_002290130.1| hypothetical protein OCAR_7161 [Oligotropha carboxidovorans OM5] gi|209874469|gb|ACI94265.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] Length = 277 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 76/275 (27%), Gaps = 100/275 (36%) Query: 19 CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS----------- 67 +A AAD G Y ++ G Y G A Y + Sbjct: 15 QAAHAADMPDYYALRG--------PVGYGTGVVNWQGFYVGGQAAYGSADMNFANSTGSL 66 Query: 68 ---------------------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL 106 G E+ H G F GYN + ++ GVE YT Sbjct: 67 ISRQLQYASIEQSAQVSQWPILGRESQHGHGFGGFVGYNSQWDDVVLGVEA--SYTHGNF 124 Query: 107 ADNIHSLHGI-----------------------------GGSLRIRGGYEVSDSLLLYAT 137 + GSLR+R GY ++ L Y Sbjct: 125 NGSASGSLNYVFADIITTPAPGYTDDITYSGTSRFKITDTGSLRVRAGYAW-NNFLPYVF 183 Query: 138 VGPDVAQKYETGKA--------------------------GEITPIAIGGTAGVGVEVGG 171 G + + A + G AG+GV++ Sbjct: 184 GGVSLGRADVARTAVISGTQTNPGAAPPNDVLNVYLAKSEAQGGRFIYGYAAGLGVDMML 243 Query: 172 LSESLVARLEYRASKY-SKVEGFYNTISLGVGMKF 205 +L R+E+ KY ++ NT +G+G KF Sbjct: 244 F-GNLFGRVEWEYLKYAGPIDTSINTGRVGLGYKF 277 >gi|46205164|ref|ZP_00048920.2| COG3637: Opacity protein and related surface antigens [Magnetospirillum magnetotacticum MS-1] Length = 313 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 45/138 (32%), Gaps = 35/138 (25%) Query: 92 MYGVEGDVRYTVPVLADN-----------------IHSLHGIGGSLRIRGGYEVSDSLLL 134 MYG+E D+ + I + GS R R GY ++ L+ Sbjct: 1 MYGLEADLAGSNLKRGVRSDVQGFGYEAIDPPFALIREKTDLFGSARARLGYAFGNN-LI 59 Query: 135 YATVGPDVAQKYETGKAGE----------ITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 YAT+G A + +G T G GV+ + L L+YR Sbjct: 60 YATLGLSGANGRVLATYPDLAGGATATAARDVSYLGFTLGAGVQF-AVDPHLSLGLDYRY 118 Query: 185 SKYSKVEGFYNTISLGVG 202 S + G+G Sbjct: 119 SDLGESR------RFGLG 130 >gi|254513426|ref|ZP_05125491.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] gi|221532430|gb|EEE35426.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] Length = 185 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 19/148 (12%) Query: 46 YVPIRHDFNGPYAGLSALYNGS--------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97 D+NG Y G S N + EA + +F GY V++ ++G E Sbjct: 17 PTHALADWNGAYVGFSLGTNTTNELSSNVTGSFEADSSTALGVFGGYTVQNDDFVFGGEV 76 Query: 98 DVRYTVPV--LADNIHSLHGIG-GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154 T + D G L+ R GY V +++L Y G + ETG Sbjct: 77 AFLRTPDLEFEVDGREVTFDFGIFDLKGRAGY-VVNNILFYGVAGFSRISEQETGDH--- 132 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEY 182 A G GVG + L + V +EY Sbjct: 133 ---ANGFNFGVGADYN-LGNNFVIGIEY 156 >gi|302381465|ref|YP_003817288.1| porin [Brevundimonas subvibrioides ATCC 15264] gi|302192093|gb|ADK99664.1| porin [Brevundimonas subvibrioides ATCC 15264] Length = 277 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 52/155 (33%), Gaps = 28/155 (18%) Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG------------ 117 +E + G GY+ + + G G+ Y+ D++ S Sbjct: 92 DEDSNGVEGGGRIGYDFQFGNFVVGAVGE--YSGVDAEDSVTSYSTTPAYYVSERNLNNL 149 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVA---------QKYETGKAGEITPIAIGGTAGVGVE 168 +LR R GY L+YAT G T A A G AG G+E Sbjct: 150 AALRARVGYAY-GPALVYATGGVATGEMTNRFYSSNGQNTFTATTDDDQADGYQAGGGIE 208 Query: 169 VGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 L+ L EY + +E + +G G+ Sbjct: 209 Y-ALAPHLSVTGEYIYT---SLEASDFNVRVGRGI 239 >gi|85704833|ref|ZP_01035934.1| possible outer membrane protein [Roseovarius sp. 217] gi|85670651|gb|EAQ25511.1| possible outer membrane protein [Roseovarius sp. 217] Length = 197 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 15/154 (9%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGV 95 P ++ G Y G Y + S G + AGY+ + + G Sbjct: 34 ATPVAPPAPTSPNWTGFYGGGQIGYGDVDTSAAGVEGDGLIGGVIAGYDYDFGNNWVVGA 93 Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 D + L + R GY++ + LLY T G A G Sbjct: 94 GLDYDFADIDLGGAASLEEVFR--AKARAGYKIGNG-LLYGTGGYAWADTDTFGDDDG-- 148 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G G E ++E++ E ++ Sbjct: 149 -----YFVGAGYE-HMVTENVSLGGEVLYHQFDD 176 >gi|325915202|ref|ZP_08177525.1| opacity protein [Xanthomonas vesicatoria ATCC 35937] gi|325538562|gb|EGD10235.1| opacity protein [Xanthomonas vesicatoria ATCC 35937] Length = 279 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 27/166 (16%) Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112 A + + GG+ + GY+ + +YGV + + + S Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDIRDSVSAFSTTPA 139 Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156 +LR R GY + L Y T G + G Sbjct: 140 LYTFTRQLNRTAALRGRIGYAFGQQGNYLAYFTAGVARGEFDHSFASSNTANSFTGSGGD 199 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 A G AGVG++ LS+ + +EY ++ + + +G+G Sbjct: 200 SADGYQAGVGLQ-RRLSDHVSVGVEYLFTRLQDEDT---RVRVGLG 241 >gi|148255878|ref|YP_001240463.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146408051|gb|ABQ36557.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] Length = 257 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 61/226 (26%), Gaps = 44/226 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ LF A + AA A + T A V +D++G Y G Sbjct: 2 MKTLFGAT-------VGLGAIAAATSALAADLQMKKGPYTKAPPAVVATVYDWSGFYVGF 54 Query: 61 SAL--------------------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR 100 +A G A GY + + ++GVE Sbjct: 55 NAGGGSSRDCWNLVQNANVVVNPALNREGCSGGGGAAVGGQVGYRYQMANWVFGVEAQGD 114 Query: 101 YTVPVLADNIHSLHGIGGSLR--------IRGGYEVSDSLLLYATVGPDVAQKYETGKA- 151 + + L + R + GY D++L Y G V Sbjct: 115 WANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAF-DNILGYIKGGAAVVGDRYDTFTT 173 Query: 152 ------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE 191 GGT G G+E G + + +EY Sbjct: 174 NTNVMLDRANTTRWGGTIGAGLEY-GFAPNWSVGVEYDHIFLGNKN 218 >gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 369 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 79/229 (34%), Gaps = 57/229 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51 Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ + G + G F GY V G E + Y P D Sbjct: 52 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 166 Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 G+E ++ + RLEY+ + + + + +S+GV +F Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 214 >gi|56552387|ref|YP_163226.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4] gi|260753934|ref|YP_003226827.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543961|gb|AAV90115.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4] gi|258553297|gb|ACV76243.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 267 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 36/228 (15%) Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71 + A Q A V + V P T + + + GL + + Sbjct: 41 TSASDGSAPVQDAPVVAQDTVAQPAVQPVPLTPDPNEVANHSGIKFRGLRVEGDIGWTRA 100 Query: 72 AHHNAGGSIFAGYN-------VEDSCIMYGVEG-----------DVRYTVPVLADNIHSL 113 ++ G GY V D+ ++GVEG + + + + + Sbjct: 101 QANHTTGRNNMGYGGTLGVDAVVDNFFVFGVEGSYWNPSKMWEKNAGNNIAIGSQGNNIG 160 Query: 114 HGIGG-SLR---------IRGGYEVSDSLLLYATVGPDVA--QKYETGKAGEITPIAIGG 161 G S R +R G+ + LL+Y G + AG T +G Sbjct: 161 QVGNGYSARKMFQEWDATLRMGFLPTKDLLIYMAGGYASGKQRNLYMNGAGAPTSKYVGW 220 Query: 162 T----AGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + G G+E ++++ +YR +++ + +LG G +F Sbjct: 221 SNGYSVGGGIEYS-ITKNFFMNAQYRWTQFGNHTS-RSRATLGFGFRF 266 >gi|77747747|ref|NP_635849.2| membrane protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761086|ref|YP_241570.2| membrane protein [Xanthomonas campestris pv. campestris str. 8004] gi|188989886|ref|YP_001901896.1| putative outer membrane protein [Xanthomonas campestris pv. campestris str. B100] gi|167731646|emb|CAP49824.1| putative outer membrane protein [Xanthomonas campestris pv. campestris] Length = 279 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 56/169 (33%), Gaps = 25/169 (14%) Query: 55 GPYAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS- 112 G G +A + G + A + AGY+ + +YGV + + + S Sbjct: 77 GFCGGAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAEYTRNDLRDSVSAFST 136 Query: 113 ---------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGE 153 +LR R GY L Y T G + G Sbjct: 137 TPALYTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFDHSFASSNTANSFTGS 196 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 A G AG+G++ LS+ + +EY ++ + + +G G Sbjct: 197 GGDSANGYQAGIGLQ-RRLSDHVSVGVEYLFTRLQDEDT---RVRVGPG 241 >gi|323135881|ref|ZP_08070964.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] gi|322398972|gb|EFY01491.1| putative outer-membrane immunogenic protein precursor [Methylocystis sp. ATCC 49242] Length = 283 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 57/194 (29%), Gaps = 56/194 (28%) Query: 51 HDFNGPYAGLSALYNGSFG--------------------EEAHHNAGGSIFAGYNVE-DS 89 + G Y G++ Y+ + G + G GYN + Sbjct: 40 FTWTGLYGGVNIGYSFNAGGAGWGYFADPLLLSGATWTANPSAQGVIGGGQIGYNYQYSP 99 Query: 90 CIMYGVEGDV---------------RYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSL 132 ++ G E D+ + + A N + G++R R G + +L Sbjct: 100 WLVIGAEADIQAADINSQQNNWMPSNWFGGLAALNTNKYVDWFGTVRGRLGLVMPSYPNL 159 Query: 133 LLYATVGPDVAQK-----------------YETGKAGEITPIAIGGTAGVGVEVGGLS-E 174 ++Y T G + G TAG GVE ++ Sbjct: 160 MVYGTAGFAYGYVSNTVSVANYPFAAFPVPFAQTGQTTSGNTNTGWTAGGGVEWTPMAFP 219 Query: 175 SLVARLEYRASKYS 188 + ++EY + Sbjct: 220 AWSLKVEYLYTDLG 233 >gi|332187217|ref|ZP_08388956.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17] gi|332012638|gb|EGI54704.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17] Length = 200 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNA--GGSIFA---GYNVEDSCIMYGVEGDV-------- 99 F G Y+ + N+ G ++ GY++ ++ G EG++ Sbjct: 27 FTGFRVEGLIGYDSLNDRQGKDNSSSDGVLYGAGIGYDIPAGPVILGAEGEITGSSSDTR 86 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA----QKYETGKAGEIT 155 V V D G R GY +S L Y G A + G + Sbjct: 87 SNNVTVPGDQFRLGAGRDLYAGARVGYMISPVALGYVKAGYTNAKFDARYTNAGVTNVNS 146 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF-----YNTISLGVGMKF 205 G G G+E +S + + EYR S Y +++G + + G+G++F Sbjct: 147 QEVGGYRLGAGLEY-AISPNTFVKGEYRYSHYDELDGVGINPNRHQLLAGLGLRF 200 >gi|46203394|ref|ZP_00051591.2| hypothetical protein Magn03005785 [Magnetospirillum magnetotacticum MS-1] Length = 299 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 42/136 (30%), Gaps = 29/136 (21%) Query: 70 EEAHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNIH--------------- 111 ++ G GYN + S + GVE D +Y N + Sbjct: 91 RNSNEGFVGGGQIGYNYQFTPGSGFVIGVEADAQYADFGRNRNRYAFATTTGTGGIIPGT 150 Query: 112 --------SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--GKAGEITPIAIGG 161 S G++R R GY D L+Y T G G G Sbjct: 151 LVYNPSGLSGLDYFGTVRGRLGYAF-DRTLVYGTGGFAYGSGGGREFGTGVSSNDFQTGW 209 Query: 162 TAGVGVEVGGLSESLV 177 AG G+E ++S + Sbjct: 210 AAGGGIEYALPTDSFL 225 >gi|148253080|ref|YP_001237665.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] gi|146405253|gb|ABQ33759.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1] Length = 258 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 62/201 (30%), Gaps = 42/201 (20%) Query: 18 FCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL-------YNGSF-- 68 + AD R ++ P +D++G Y G++ ++ +F Sbjct: 14 ASPSFGADQTERVYYNYSRPKPVFE------PNYDWSGFYVGVNVGGGKAHACWDDAFSF 67 Query: 69 ----------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD--------NI 110 G + A AGY + + + GVE + ++ Sbjct: 68 GVLNSPAISEGCHSTSGAIAGGQAGYRWQSAFAVLGVEAQGDWANLRGSNISQLDPTLTN 127 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-------KAGEITPIAIGGTA 163 ++ G + G + +L Y G + G + GGT Sbjct: 128 RTITDAIGLFTGQAGAAWQN-VLWYIKGGAAITNDKYDGLITGTSVLNDRASGTRWGGTI 186 Query: 164 GVGVEVGGLSESLVARLEYRA 184 G G+E+ G + + +EY Sbjct: 187 GTGIEI-GFAPNWSVGIEYDH 206 >gi|163743239|ref|ZP_02150620.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10] gi|161383427|gb|EDQ07815.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10] Length = 194 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 55/174 (31%), Gaps = 18/174 (10%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + V ++++A A A A + P + N D+ G Y G Sbjct: 1 MTRIVSMAAIAAALSTPAFAGNLEEPVVAPAPAAPPVVVAND----GGDWTGAYIGGQIG 56 Query: 64 YNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 + + + + AGYN + + G E D T L + + +R Sbjct: 57 QLDADTSNGLSGDDVSYGVHAGYNYDFGRFVLGGEIDYDATDVDLGGGAAT---VDSVMR 113 Query: 122 IRG--GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG------GTAGVGV 167 + GY+ +L Y T G + GE I + T G V Sbjct: 114 GKVKAGYDF-GPVLAYVTGGVAQVDTSVGDETGEFYGIGVAYRVTDQWTVGGEV 166 >gi|260431608|ref|ZP_05785579.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415436|gb|EEX08695.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] Length = 179 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 46/145 (31%), Gaps = 13/145 (8%) Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 D+ G Y G Y + + G I GY+ + + G D ++ L+ Sbjct: 28 DWTGFYGGAQIGYADIDTNLSGVDGDGVIGGIILGYDYDLGDWVVGGGFDYDWSDIDLSG 87 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 L+ R GY+V+ LLY G A G G G G E Sbjct: 88 AATVEDVWR--LKARAGYKVNPQGLLYGVAGYAEAGT---DTLGSDD----GWFVGAGYE 138 Query: 169 VGGLSESLVARLEYRASKYSKVEGF 193 ++ ++ E ++ Sbjct: 139 -QIVAPNVSIAGEVLYHEFDDFNST 162 >gi|170749700|ref|YP_001755960.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170656222|gb|ACB25277.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 287 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 48/183 (26%), Gaps = 59/183 (32%) Query: 53 FNGPYAGLSALY----------------------------NGSFGEEAHHNAGGSIFAGY 84 + G Y G++A Y ++ G GY Sbjct: 40 WTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVVSVNNRSNNNGFSGGAQIGY 99 Query: 85 NVE---DSCIMYGVEGDVRYTVPVLADN------------------------IHSLHGIG 117 N + S I+ G E D +Y N + Sbjct: 100 NWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLTGTPGFAFSAPRAYVATSGNGLDYF 159 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGVEVGGLSE 174 G+ R R GY D L+Y T G + + G G GVE ++ Sbjct: 160 GTARGRLGYAF-DRTLVYGTGGYAYGSGQDDQTFAGRNFRSSFRNGYAVGGGVEYALPTD 218 Query: 175 SLV 177 S + Sbjct: 219 SFL 221 >gi|254437354|ref|ZP_05050848.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307] gi|198252800|gb|EDY77114.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307] Length = 197 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 18/194 (9%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 +F A ++L ++ ++ A + + + D+ G Y G S Sbjct: 1 MFFAATTTALTMSVASASFAGNLSEPIIAPSPAAMAAPVYSTGT----DWTGFYVGGSLG 56 Query: 64 YNGSFGEEA----HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119 Y +++ A I AGY+ + + G E ++ V Sbjct: 57 YAEGSEDDSTVFEDDGATYGIHAGYDYDFGNFVLGAELELS-GFDVSDGGNDIDSVSRAK 115 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 LR GY+ + + L Y TVG + G + GVG++ L++ + Sbjct: 116 LRA--GYD-AGAFLPYLTVGVA---SLDIGGGLDANDTGSFY--GVGMDY-MLNDRIRLG 166 Query: 180 LEYRASKYSKVEGF 193 E ++ + Sbjct: 167 GEVLQHEFGNFDNT 180 >gi|254475346|ref|ZP_05088732.1| putative outer membrane protein [Ruegeria sp. R11] gi|214029589|gb|EEB70424.1| putative outer membrane protein [Ruegeria sp. R11] Length = 190 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 54/181 (29%), Gaps = 22/181 (12%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + V ++++A A A A + V + T D+ G Y G Sbjct: 1 MTRIVSMAAIAAALSTPAFAGNLEEPVVEPVPAPVTVVQTGT------DWTGAYIGGQIG 54 Query: 64 YNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 + + + I AGYN + + G E D T L + R Sbjct: 55 QLDADTSNGLSGDDVSYGIHAGYNYDFGQFVLGGELDYDATDTDLGGAT-----VDSVAR 109 Query: 122 IRG--GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG------GTAGVGVEVGGLS 173 + GYE +L Y T G + GE I + T G + Sbjct: 110 AKVKAGYEF-GPVLAYVTGGVAQVDTSVGDETGEFYGIGMAYRVNEQWTVGGEILEHDFD 168 Query: 174 E 174 + Sbjct: 169 D 169 >gi|39936343|ref|NP_948619.1| heme receptor [Rhodopseudomonas palustris CGA009] gi|39650198|emb|CAE28721.1| possible heme receptor [Rhodopseudomonas palustris CGA009] Length = 1191 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 45/149 (30%) Query: 45 RYVPIRHDFNGPYAGLSALYN----------------GSFGEEAHHNAGG----SIFAGY 84 +++G +AG++ YN G EA + G + AGY Sbjct: 935 APSAAVANWSGFHAGVNTAYNSAKFGGAMTALDGSADGHAANEAPNQQVGALSFGLHAGY 994 Query: 85 NVEDSC-IMYGVEGDVRYTVPVLADNIHSLHG------------------------IGGS 119 + + + + G+E DV T + + G + Sbjct: 995 DYQFASRFIVGIEADVAKTDIGASQVTFASEGVACNCANNLARMRQLEAVQQSEIKWLST 1054 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYET 148 +R R GY V+D L+L+A+ G ++ E+ Sbjct: 1055 VRGRLGYAVNDRLMLFASGGVAFMRQDES 1083 >gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 358 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 67/204 (32%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 40 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 41 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNTPGGASYKDHDTGVSPV 155 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 G+E ++ + RLEY+ + Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTN 178 >gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 358 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 79/229 (34%), Gaps = 57/229 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40 Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ + G + G F GY V G E + Y P D Sbjct: 41 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155 Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 G+E ++ + RLEY+ + + + + +S+GV +F Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 203 >gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107] gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107] Length = 344 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 32/193 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++LF + A+++ S AA R Y G+ Sbjct: 1 MKRLFTVLLC---AISTITSYYAAANSREEVETSI---------------------YVGI 36 Query: 61 SALYNGSFGEEAHH-------NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113 A Y+ + G + + + G +F GY++ + D+ T ++ Sbjct: 37 RAGYSYNEGSCSSNHLKCDKSDTGYGLFIGYDINPRWAIETSFNDIGDTTATYSNAHLDG 96 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 + ++ Y + +L LY VG G+ + + G G+E+ +S Sbjct: 97 DLSQIDISVKYAYPIYQNLSLYGKVGAAYWDAKAKGQNVSFSDTGVSPLLGAGLELI-IS 155 Query: 174 ESLVARLEYRASK 186 E R+EY+ Sbjct: 156 EHWKGRIEYQYID 168 >gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 369 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51 Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ + G + G F GY V G E + Y P D Sbjct: 52 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGT 162 N + + G L + GY ++D L +Y +G A G T + Sbjct: 107 NTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPV 166 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 G+E ++ + RLEY+ + Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTN 189 >gi|148253343|ref|YP_001237928.1| hypothetical protein BBta_1819 [Bradyrhizobium sp. BTAi1] gi|146405516|gb|ABQ34022.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 302 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 81/305 (26%), Gaps = 112/305 (36%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L +AV V +AQAAD G T R +++G Y G Sbjct: 10 MRSLVMAVSV----FGMVSAAQAADMPDLPVLRGGL------TEGLNGARANWDGYYVGG 59 Query: 61 SALYNGSFGEEAHH------------------------------NAGGSIFAGYNVEDSC 90 Y S + + + ++ G N + Sbjct: 60 QFGYGTSDMDFSRSAASLTNFIFRNSVLQTPTSTWSVLNKNHVQGSSFGVYVGRNFQWED 119 Query: 91 IMYGVEGDVRY-TVPVLADNIHSLHGI---GG---------------------------S 119 ++G+E + Y V + I G + Sbjct: 120 TVWGIEVNYNYMNRMVSSSGSSMALNIVNPSGETVAANETRTYSTSVQAAAALQIKDVVT 179 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI------------------------- 154 LR R G+ +D+ L Y G V + + A Sbjct: 180 LRGRVGWA-ADNFLPYVFGGLAVGRMETSRVATTNVYLTDTFVNQTTGAIISQTGPSYLP 238 Query: 155 -----------TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG---FYNTISLG 200 G T G+G E L AR E+ K+ V+ N+ G Sbjct: 239 SVSRTYGESRTNSFVGGWTGGLGFEYMMW-GGLFARGEWEYVKFMTVKDTAVTLNSFRAG 297 Query: 201 VGMKF 205 VG KF Sbjct: 298 VGYKF 302 >gi|323138214|ref|ZP_08073286.1| porin [Methylocystis sp. ATCC 49242] gi|322396466|gb|EFX98995.1| porin [Methylocystis sp. ATCC 49242] Length = 259 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 46/183 (25%) Query: 51 HDFNGPYAGLSAL---------------YNGSFG---------EEAHHNAGGSIFAGYNV 86 + G Y G++ + G ++ G + AGYN Sbjct: 39 FSWTGFYGGVNIGGSWLDRYNYDAWGPAWTGFGWINATQIAATNFSNAGVSGGVQAGYNY 98 Query: 87 EDSCI-MYGVEGDVRYTVPVLADNIHSLHGIG------------------GSLRIRGGYE 127 + + GVE D + T + A +++ G+G G++R R G Sbjct: 99 QLWSWLVAGVEADFQGT-SIGASGVNNGWGLGFAGLPVLWGGASRGVDYFGTVRGRLGVT 157 Query: 128 VSD--SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 + L+Y T G + G G + ++EY + Sbjct: 158 LPGWQQFLVYGTGGFAYGEIRINNGWLGNLRAVGTGWTVGGGVEWAFMPNWSTKVEYLYT 217 Query: 186 KYS 188 Sbjct: 218 SIG 220 >gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 369 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 52 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 166 Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 G+E ++ + RLEY+ + + + + +S+GV +F Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 214 >gi|170750729|ref|YP_001756989.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170657251|gb|ACB26306.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 314 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 64/227 (28%), Gaps = 66/227 (29%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + + + L L +A+AAD G D++G Y G Sbjct: 1 MRTVTFPLL-AVLGLCGVNTARAADLDYDYLRGADYDPVPAPVV-------DWSGVYVGG 52 Query: 61 S------------------ALYNGSFGEEAHH--------------NAGGSIFAGYNVED 88 A Y E+ A FAG+NV+ Sbjct: 53 HGGFTSGGLSQRNAMQSTLANYFAYSTVESEFSVSKMLSLPGTRTRGASFGAFAGFNVQF 112 Query: 89 SCIMYGVEGDVRYTVPVL----------------------ADNIHSLHGIGGSLRIRGGY 126 I+ G+E D +T + ++ G++R R GY Sbjct: 113 DGIVLGIEADYTHTDQNSWSTNGINRIMTTAAGNSESVNLSGTSNTRIEDYGTIRGRAGY 172 Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 + LL Y T G + + + G +A L+ Sbjct: 173 AFGN-LLPYVTAGAAIGRVTINDTV---SVQNYGYSATTYAANQALT 215 Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 10/90 (11%) Query: 125 GYEVSDSLLLYATVGPDVAQKYETG------KAGEITPIAIGGTAGVGVEVGGLSESLVA 178 GY + P A T G G G+E ++ +++ Sbjct: 226 GYASFNPNFPLNNSTPAGQGAQTVPYAPTPLTANARTKTIGGVALGFGLEY-AITPNILV 284 Query: 179 RLEY---RASKYSKVEGFYNTISLGVGMKF 205 R EY R ++ NT+ G +KF Sbjct: 285 RGEYQYVRFQDFNGHNAQLNTVRGGAAVKF 314 >gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 350 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDFYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + G+E ++ + RLEY+ + Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170 >gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073] gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073] Length = 379 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 28 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 61 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 62 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 116 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 117 NINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 176 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 177 FAGGVEY-AITPEIATRLEYQWTN 199 >gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39] gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605] gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39] gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605] Length = 374 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 57 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 111 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 112 NINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 171 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 172 FAGGVEY-AITPEIATRLEYQWTN 194 >gi|170743796|ref|YP_001772451.1| PE-PGRS family protein [Methylobacterium sp. 4-46] gi|168198070|gb|ACA20017.1| PE-PGRS family protein [Methylobacterium sp. 4-46] Length = 502 Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%) Query: 78 GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYAT 137 G + G N + + ++YG E D+ + H + GSLR R G+ + LLLY T Sbjct: 336 GGLHLGANAQSARLVYGAEADI-------DAGTDANHRVLGSLRGRLGWVLDRDLLLYGT 388 Query: 138 VGPDVAQ 144 G +A+ Sbjct: 389 AGLGLAR 395 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 40/121 (33%), Gaps = 39/121 (32%) Query: 52 DFNGPYAGLSAL-----------YNGSFGEEAHHNAGG-------------------SIF 81 D++G Y G +G G GG + Sbjct: 34 DWSGFYLGAQTGGFATGQGRRTFVSGDGGGLTPTVFGGRGGRTGIVAGTVEGRTIFEGVH 93 Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 AGYN + ++ GVEGD+ P+ + SLR R G + L+Y T G Sbjct: 94 AGYNWQRGDLVGGVEGDLSAAGPL--------DDVLASLRGRVGVA-TGRALVYGTAGLG 144 Query: 142 V 142 + Sbjct: 145 I 145 >gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627] gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627] Length = 358 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 66/196 (33%), Gaps = 35/196 (17%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA Y + ++ + Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQFHDTG 51 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGI 116 N G + G F GY V G E + Y P DNI+ + Sbjct: 52 FIDNN---GPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDNINGAYKA 103 Query: 117 GG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGTAGVGVEVG 170 G L + GY ++D L +Y +G A G + + GVE Sbjct: 104 QGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPVFAGGVEY- 162 Query: 171 GLSESLVARLEYRASK 186 ++ + RLEY+ + Sbjct: 163 AITPEIATRLEYQWTN 178 >gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane major heat-modifiable protein; AltName: Full=Outer membrane protein 33K; Flags: Precursor gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium] gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 350 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + G+E ++ + RLEY+ + Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170 >gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1] gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591] gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1] gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591] Length = 374 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 77/229 (33%), Gaps = 57/229 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 57 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 111 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 112 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 171 Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 GVE ++ + RLEY+ + + + + +SLGV +F Sbjct: 172 FAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRF 219 >gi|114763049|ref|ZP_01442479.1| possible outer membrane protein [Pelagibaca bermudensis HTCC2601] gi|114544373|gb|EAU47381.1| possible outer membrane protein [Roseovarius sp. HTCC2601] Length = 199 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 16/163 (9%) Query: 52 DFNGPYAGLSALYNG----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 D+ GP G+ Y +E A + A Y+ + + G V Y + Sbjct: 44 DWTGPSVGVQLGYGYADPDGPEDETSDGAVYGLNAYYDHDFGNWIAG--AGVEYEGADID 101 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167 + R GY++ + ++Y G A T + G GVG Sbjct: 102 LGEAGDLESMARVGGRVGYDL-GTTMVYGQGGYARA---MTDGGSLDAGDSNGYYVGVGA 157 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFY-----NTISLGVGMKF 205 E +++++ + + +++S + T ++G+ +F Sbjct: 158 ETY-VADNVTLSGDVKYNEFSDFDDDDLEIGATTATVGLNYRF 199 >gi|170729161|ref|YP_001763187.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908] gi|169814508|gb|ACA89092.1| OmpA domain protein transmembrane region-containing protein [Shewanella woodyi ATCC 51908] Length = 182 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 16/161 (9%) Query: 55 GPYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 G Y G A + G G ++ GYN DS +G+E T + + Sbjct: 26 GFYLGGQANQTSLEDNIGVLDESAKGLGVYGGYNFNDS---FGIEAGFFATDSFVDEVDV 82 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 + S IR + +DS+ Y G + + Y + + G G GV+V Sbjct: 83 RMAAFSLSPVIR--HAFTDSVTGYLKAGLVLNRIYSDDDEVDESYQGTGWLFGAGVDVT- 139 Query: 172 LSESLVARLEYRASKY----SKVEGFYNTISL---GVGMKF 205 ++ESL R+ Y ++ S+++ +Y ISL G+G+ + Sbjct: 140 ITESLALRVFYEINETEPENSELDNYYADISLVQYGIGLHY 180 >gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 369 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 52 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGT 162 NI+ + G L + GY ++D L +Y +G A G T + Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPV 166 Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 G+E ++ + RLEY+ + + + + +S+GV +F Sbjct: 167 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 214 >gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 358 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40 Query: 61 SALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ + G + G F GY V G E + Y P D Sbjct: 41 KLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IAIGGT 162 N + + G L + GY ++D L +Y +G A G T + Sbjct: 96 NTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPV 155 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 G+E ++ + RLEY+ + Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTN 178 >gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] Length = 326 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 21/161 (13%) Query: 57 YAGLSALYNG---------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 Y G A + S + N G +FAGY V + +E + Sbjct: 27 YVGARAGASHITNMDDAVTSVTKLEDTNFAGGVFAGYQVTP---WFALETGYTHLGNAEL 83 Query: 108 DNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG--TAG 164 DN + G+ L + Y +SDS+ ++A G G + G TAG Sbjct: 84 DNKQGSYEAQGADLVTKFSYAISDSVDIFAKAGAFYYDWNAIGSGVSNSD--NGWSPTAG 141 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 G+E +++++ RLEY+ Y+ V G G+G+ F Sbjct: 142 AGIEY-FINKNVSTRLEYQY--YNDVAGPDIHF-AGLGLAF 178 >gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9] gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9] Length = 374 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 57 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 111 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 112 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 171 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 172 FAGGVEY-AITPEIATRLEYQWTN 194 >gi|115526159|ref|YP_783070.1| hypothetical protein RPE_4165 [Rhodopseudomonas palustris BisA53] gi|115520106|gb|ABJ08090.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 263 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 78/271 (28%), Gaps = 82/271 (30%) Query: 7 AVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNG 66 + +++AL +AQ A+ G ++ G Y G A Y Sbjct: 3 GLAGAAVALGLGLAAQGAEAADMPFLRGALFDGPRRHV-------NWEGFYVGGHAGYGT 55 Query: 67 SFGEEAH--------------------------------HNAGGSIFAGYNVEDSCIMYG 94 S + H G F GYN + ++ G Sbjct: 56 SDMNFTNATEGVVAKLLDNTVVESLLGVSSWPVLDKRSAHGHGYGGFVGYNAQWDSVVLG 115 Query: 95 VEGD----------------------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSL 132 +E + + Y + ++ + GS R+R GY Sbjct: 116 IEANYLHGNFGGATTGSMARELISGGINYGATNTSSASINVRDV-GSARLRAGYAWKG-F 173 Query: 133 LLYATVGPDVAQK-----------------YETGKAGEITPIAIGGTAGVGVEVGGLSES 175 L Y G + Q + + G GVG++ L Sbjct: 174 LPYMFGGVSLGQADIIRAATIRGRDAGGTWVLSAAQAQHGHFIYGYAGGVGID-MMLVGG 232 Query: 176 LVARLEYRASKYSK-VEGFYNTISLGVGMKF 205 L R E+ K++ V+ +T+ G+G KF Sbjct: 233 LFLRAEWEYLKFAAPVDTSVSTVRAGLGYKF 263 >gi|86748435|ref|YP_484931.1| hypothetical protein RPB_1310 [Rhodopseudomonas palustris HaA2] gi|86571463|gb|ABD06020.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 265 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 42/177 (23%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV----------RYTVPVLAD---------N 109 G+ + G F GYN + ++ G+E + Y + + N Sbjct: 91 GKSSSRGQGWGGFVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRIFSTGGVTYDVDYN 150 Query: 110 IHSLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA---------------- 151 + + GS R+R G+ + S L YA G + Q A Sbjct: 151 AAASIKVNDVGSARLRAGWAI-GSFLPYAFGGVALGQADIVRTARISGTQGGTAFTPLVS 209 Query: 152 --GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205 + + G + G+GV+ L L R E+ K++ + +T+ GVG KF Sbjct: 210 NLVQNSHFIYGYSGGLGVD-MMLYRGLFVRAEWEYQKFAAPINTAVSTVRAGVGYKF 265 >gi|209966189|ref|YP_002299104.1| outer membrane protein, putative [Rhodospirillum centenum SW] gi|209959655|gb|ACJ00292.1| outer membrane protein, putative [Rhodospirillum centenum SW] Length = 219 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 61/190 (32%), Gaps = 37/190 (19%) Query: 53 FNGPYAGLSALYN-------------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 F+GPY G Y + G+ + +AGY + + G+E + Sbjct: 30 FDGPYIGAFFAYADLDVDARATVGSVTTTGDGSGDGWTFGAYAGYGMSLGPVYAGLEAEY 89 Query: 100 RYTV---PVLADNIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE- 153 V A NI + S + R G V D +L+Y G Q G Sbjct: 90 GLNGSSIGVRAGNIRTSFDAQDSYGVSARLGTVVMDRILVYGRFGRQWTQFDVKNTLGTV 149 Query: 154 ---ITPIAIGGTAGVGVEVG----GLSESLVARLEYRASKYSKVEGF-----------YN 195 G G GVE G ++++ RLEY Y + + Sbjct: 150 AIGSDDRLDGWRYGGGVEYALAGPGKGDNMLVRLEYSYFDYDDLATTAQLASTAAQVDES 209 Query: 196 TISLGVGMKF 205 I +G +F Sbjct: 210 QIRVGFAYRF 219 >gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 358 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 41 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155 Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 G+E ++ + RLEY+ + + + + +S+GV +F Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 203 >gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 358 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 78/229 (34%), Gaps = 57/229 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 41 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155 Query: 163 AGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 G+E ++ + RLEY+ + + + + +S+GV +F Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 203 >gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9] Length = 369 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 52 KLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKANVPGGASFKDHDTGVSPV 166 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 167 FAGGVEY-AITPEIATRLEYQWTN 189 >gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5] gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5] Length = 358 Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135 Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G T + GVE ++ + RLEY+ + Sbjct: 136 KSNVPGGASTKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178 >gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi] gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 350 Score = 52.0 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DN + + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G T + G+E ++ + RLEY+ + Sbjct: 128 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170 >gi|103486581|ref|YP_616142.1| membrane protein [Sphingopyxis alaskensis RB2256] gi|98976658|gb|ABF52809.1| membrane protein [Sphingopyxis alaskensis RB2256] Length = 277 Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 22/138 (15%) Query: 83 GYNVEDSCIMYG--VEGD--------VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSL 132 GY+ + G VEG ++ + + + R+R GY Sbjct: 107 GYDKRMGNFVLGAVVEGGHSVARDSVSGFSTTPASYTMSREADYQANARLRAGYTPGGGA 166 Query: 133 LLYATVGPDVAQ--------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 L Y T G A+ A A G T G G E ++ ++ LEY Sbjct: 167 LFYVTGGGAYARLDNRFTTTNTANSFADNGKTNAWGYTVGGGAE-LMVTNNIGIGLEYLY 225 Query: 185 SKYSKVEGFYNTISLGVG 202 + + +++G G Sbjct: 226 TDVKDKDY---VVNVGPG 240 >gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327] gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86] Length = 358 Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178 >gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 350 Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + G+E ++ + RLEY+ + Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170 >gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 350 Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + G+E ++ + RLEY+ + Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170 >gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] Length = 355 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 16/121 (13%) Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGG--- 125 + +F GYNV + +EG YT + D H+L + G Sbjct: 63 RDDFAAGLFMGYNVTP---WFAIEG--GYTWLGEATLKGDEHHNLGKVEQQAIDLVGKFT 117 Query: 126 YEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183 Y+ +D + LY VG + G + I TAG+G E +++L AR EY+ Sbjct: 118 YQATDKVDLYTKVGGAWQFTRAKVEGVGSDRDDSLIA-TAGLGAEYH-FTDNLSARAEYQ 175 Query: 184 A 184 Sbjct: 176 Y 176 >gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1] gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1] Length = 358 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 195 LSLGVSYRF 203 >gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1] gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1] gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1] gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1] Length = 358 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178 >gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1] gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1] Length = 342 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 26/182 (14%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIM 92 Y+P + + YAG + GS++ GY V Sbjct: 19 ASEPPSYLPFQSYW---YAGAGLGQGHYSNGSNPQSYDSVRDRFAGSVYLGYQVNPY--- 72 Query: 93 YGVEGDVRYTVPVLADNIHSLHGIGGS-----LRIRGGYEVSDSLLLYATVGPDVAQKYE 147 + ++ Y A + I G L R GY ++ SL Y VG + Sbjct: 73 --LAPELSYQFLGSAYANYEQGQISGDFQQVVLAARFGYPLTTSLYPYVKVGGAGWFG-D 129 Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----YNTISLGVGM 203 + + GVE + L RLE++ + + ++ +LG+ Sbjct: 130 SEGLRSGSERGFSPIVAAGVEY-AFTPRLSGRLEHQYTDSLGADSIGYTDHHLTTLGLSW 188 Query: 204 KF 205 +F Sbjct: 189 RF 190 >gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972] gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1] gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1] gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972] gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1] gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1] gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1] Length = 358 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178 >gi|192292069|ref|YP_001992674.1| TonB-dependent heme/hemoglobin receptor family protein [Rhodopseudomonas palustris TIE-1] gi|192285818|gb|ACF02199.1| TonB-dependent heme/hemoglobin receptor family protein [Rhodopseudomonas palustris TIE-1] Length = 1186 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 47/163 (28%) Query: 33 GGRGVVPTIATNRYVP--IRHDFNGPYAGLSALYNGSFGEEAHHNAGG------------ 78 G V P T + P D++G +AG++ YN + A G Sbjct: 916 GSETVTPGSLTRLFAPSTAVADWSGFHAGVNTAYNSAKFGGAMTALDGSADSHAANEAPN 975 Query: 79 --------SIFAGYNVEDSC-IMYGVEGDVRYT------------------------VPV 105 + AGY+ + + + G+E D+ T + Sbjct: 976 QQVGALSFGLHAGYDYQFANRFIVGIEADIAKTEIGAPQVTFAAEGVACNCANNLARMRQ 1035 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 S ++R R GY V+D L+L+A+ G ++ E+ Sbjct: 1036 FEAVQQSEIKWLSTVRGRLGYAVNDRLMLFASGGVAFMRQDES 1078 >gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli] gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli] gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli] gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli] gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli] gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli] Length = 358 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178 >gi|126735685|ref|ZP_01751430.1| possible outer membrane protein [Roseobacter sp. CCS2] gi|126714872|gb|EBA11738.1| possible outer membrane protein [Roseobacter sp. CCS2] Length = 205 Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 40/124 (32%), Gaps = 13/124 (10%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHH---NAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 D+ G YAG Y + + AGY + + G E D+ T Sbjct: 50 SDWTGFYAGAQLGYGVVEADALSDDGEDLTYGAHAGYLYDFGSWVLGGELDLDGTEISQD 109 Query: 108 DNIHSLHGIGGSLRI--RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 + R R GY+ D L Y T G Q + GG AG+ Sbjct: 110 -----GIDVDTVTRAKLRLGYDAGD-FLPYITGGVA--QLRTSSDDDTFDGDDTGGFAGL 161 Query: 166 GVEV 169 G+E Sbjct: 162 GLEY 165 >gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1] gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1] gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1] gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1] gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1] Length = 358 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 178 >gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7] gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1] gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1] gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7] gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1] gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7] gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1] gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7] Length = 358 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 195 LSLGVSYRF 203 >gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli] gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli] gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli] Length = 358 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 195 LSLGVSYRF 203 >gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3] gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3] Length = 339 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 22/143 (15%) Query: 51 HDFNGPYAGLSAL------YNGSFGEEAHH---NAGGSIFAGYNVEDSCIMYGVEGDVRY 101 +D+ Y GL Y S GE + N GG +F GYN D + +EG Y Sbjct: 25 NDW---YTGLRLGATDYTDYKISGGESSSAIDANIGGGLFLGYNFVD---WFALEGGYTY 78 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161 + + H + L + + +D+L L+ G K + A + A Sbjct: 79 LGELETSEKITNHALE--LVGKFTLQATDNLDLFVKAG-AFGYKTDADSANDDGFNA--- 132 Query: 162 TAGVGVEVGGLSESLVARLEYRA 184 TAG G E ++++ RLEY+ Sbjct: 133 TAGFGAEY-FFNDNVSTRLEYQY 154 >gi|325919158|ref|ZP_08181215.1| opacity protein [Xanthomonas gardneri ATCC 19865] gi|325550365|gb|EGD21162.1| opacity protein [Xanthomonas gardneri ATCC 19865] Length = 279 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 53/166 (31%), Gaps = 27/166 (16%) Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112 A + + GG+ + GY+ + +YGV + + + S Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDLRDSVSAFSTTPA 139 Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156 +LR R GY L Y T G + Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGEQGDFLAYFTAGVARGEFDHSFSSSNTANSFTSSGGD 199 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 A G AGVG++ LS+++ +EY ++ + + +G G Sbjct: 200 SADGYQAGVGLQ-RRLSDNVSVGVEYLFTRLEDEDT---RVRVGPG 241 >gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017] Length = 356 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 78 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 135 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 136 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 194 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 195 LSLGVSYRF 203 >gi|27375114|ref|NP_766643.1| hypothetical protein blr0003 [Bradyrhizobium japonicum USDA 110] gi|27348250|dbj|BAC45268.1| blr0003 [Bradyrhizobium japonicum USDA 110] Length = 197 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 19/133 (14%) Query: 69 GEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI--------GG 118 G HH GG++ GY + + ++G+E + ++ + G+ G Sbjct: 14 GMGRHHATGGTVGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFG 73 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-------GEITPIAIGGTAGVGVEVGG 171 + GY +++LLY G V + + GGT G G+E G Sbjct: 74 LFTGQVGYAW-NNVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEF-G 131 Query: 172 LSESLVARLEYRA 184 + + +EY Sbjct: 132 FAPNWSIGVEYDH 144 >gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15] gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1] Length = 350 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 358 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 51/204 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 40 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 41 KLGWSQYHDTGFINNDGPTDENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGT 162 NI+ + G L + GY ++D L +Y +G A G + + Sbjct: 96 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPV 155 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 G+E ++ + RLEY+ + Sbjct: 156 FAGGIEY-AITPEIATRLEYQWTN 178 >gi|312115901|ref|YP_004013497.1| porin [Rhodomicrobium vannielii ATCC 17100] gi|311221030|gb|ADP72398.1| porin [Rhodomicrobium vannielii ATCC 17100] Length = 266 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 53/161 (32%), Gaps = 34/161 (21%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ L V + +A SA AAD + G P + G Y G Sbjct: 1 MKKILLGV---ASFVALSSSAFAADL----YKGSLKDAPVYEAPA------IWTGLYVGA 47 Query: 61 SALYNG------------SFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVL 106 Y + G GG + GYN + I+ GV D+ Sbjct: 48 HGGYAWDSIDFPGTPSHANGGAPRPDLEGGFVGGQIGYNYQFDKIVVGVVADISAANLEK 107 Query: 107 AD------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 + N + G++R GY +L YATVG Sbjct: 108 TERDGNYLNETTSIDKFGTVRAILGYSF-GKVLPYATVGYG 147 >gi|218530922|ref|YP_002421738.1| porin [Methylobacterium chloromethanicum CM4] gi|218523225|gb|ACK83810.1| porin [Methylobacterium chloromethanicum CM4] Length = 285 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 66/247 (26%), Gaps = 62/247 (25%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSA 62 + A+ + A +A AAD RR + P + G YAGL Sbjct: 1 MIRALLLGGTAALVSTAALAADLPRRE----------APPIAFAPVPVFTWTGFYAGLHT 50 Query: 63 LYN--------------------------GSFGEEAHHNAGGSIFAGYNVED---SCIMY 93 Y S E + GYN + + Sbjct: 51 GYAFTDNPNIQTRGNDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNHQFTPGGGFVA 110 Query: 94 GVEGDVRYTVPVLADNIHSL--------------HGIGGSLRIRGGYEVSDSLLLYATVG 139 G+ D + + G++ + GY D +Y T G Sbjct: 111 GLAFDATWLDLDKRTGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAF-DRFFVYGTGG 169 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199 + T G G ++ + +EY V+ F N S+ Sbjct: 170 LAFGHVSYGADFFNPGATVLQYT-GGGRKIFETGYNYGGGIEYAI----PVDSFLNYFSV 224 Query: 200 G--VGMK 204 G +G+K Sbjct: 225 GRWLGIK 231 >gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042] Length = 350 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 128 KSNVPGGVSTKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185] gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185] Length = 350 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 187 LSLGVSYRF 195 >gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354] gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354] Length = 350 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|86553066|gb|ABC72124.2| heme-binding phage-associated protein [Bartonella henselae phage 60457] Length = 171 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 32/121 (26%) Query: 13 LALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEA 72 +AL S +AQAAD + V +A + G Y G G+F + Sbjct: 1 IALISASAAQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKV 48 Query: 73 H-------------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHS 112 G I+AG N++ ++ GVE D + A + Sbjct: 49 EITDPNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSA 108 Query: 113 L 113 Sbjct: 109 K 109 >gi|302383863|ref|YP_003819686.1| membrane protein [Brevundimonas subvibrioides ATCC 15264] gi|302194491|gb|ADL02063.1| membrane protein [Brevundimonas subvibrioides ATCC 15264] Length = 275 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 27/183 (14%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIF---AGYNVEDSCIMYGVEGD 98 T + F+ + N + + G F AGY+ + ++ G+ D Sbjct: 59 DTVNTTAPANAFSPGFCDGRPQGNNAGAGCRDDDDGSGEFGARAGYDFQTGPVVVGIVAD 118 Query: 99 VRYTVPVLADNIHSLHGIGGS----------LRIRGGYEVSDSLLLYATVGPDVAQKYET 148 P + + S + R R G L Y T G AQ + Sbjct: 119 FSKVNPQDSVSAFSTTPANYAFKREVQHLFGARFRLGLAY-GRYLPYVTGGYASAQIEDK 177 Query: 149 GKAG---------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199 + A G G G+E ++ + LEY + ++ T+ Sbjct: 178 YSTSNTANSFTPTTQSQDADGYQLGGGIETR-VTSNFSVGLEYLYTD---IDADPLTVRT 233 Query: 200 GVG 202 G G Sbjct: 234 GPG 236 >gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972] Length = 350 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli M863] gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli TW10509] gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v] Length = 350 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88] Length = 350 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|88062407|gb|ABD38964.1| Pap31 [Bartonella quintana] Length = 175 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 51/187 (27%), Gaps = 71/187 (37%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 S +AL S +AQAAD + A + G Y G G+F Sbjct: 2 SVIALISASAAQAADVIATHE----------AAPVITTPNFSWTGFYIGGQI---GNFTS 48 Query: 71 EAH-------------------HNAGGSIFAGYNVEDSC-IMYGVEGDVRYTV------- 103 + G I+AG N++ ++ GVE D + Sbjct: 49 DNKIKGLGKETSIFTKGLTPQLSGIVGGIYAGSNIDLGSGLILGVETDAIWADCEATKTS 108 Query: 104 -------------------------------PVLADNIHSLHGIGGSLRIRGGYEVSDSL 132 ++D+ G+ R R G+ D + Sbjct: 109 AIRTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYKAKWSGATRARIGFSAFDRV 168 Query: 133 LLYATVG 139 + Y G Sbjct: 169 MPYFAGG 175 >gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A] gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271] gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli] gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A] gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271] Length = 350 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 187 LSLGVSYRF 195 >gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220] gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220] Length = 360 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 73/218 (33%), Gaps = 33/218 (15%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA Y + ++ Y + Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGAKLGWS-QYHDI 50 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYN------VEDSCIMYGVEGDVRYTVPVLADNIHSLH 114 + G G F GY E G YT + Sbjct: 51 GNNQINNAGPTHESQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGYTDETHNNGAFKAQ 110 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLS 173 G+ L + GY ++D L +Y +G V + G + + GVE ++ Sbjct: 111 GVQ--LTAKLGYPITDDLDVYTRLGGMVWRADAKNNTGFKDHDTGVSPVFAGGVEY-AIT 167 Query: 174 ESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 + RLEY+ + + V G + +S+GV +F Sbjct: 168 PEIATRLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 205 >gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401] gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401] Length = 348 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 187 LSLGVSYRF 195 >gi|89052837|ref|YP_508288.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1] gi|88862386|gb|ABD53263.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1] Length = 196 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 15/146 (10%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSAL--------YNGSFGEEAH-HNAGGSIFAGYNVE 87 P A + + G + G+ ++ + G E+ G + G+ + Sbjct: 14 ASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAPGIESELDGMSGGVQIGFRRQ 73 Query: 88 DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS---LRIRGGYEVSDSLLLYATVGPDVAQ 144 + +YG E + PV+ + + L + GY++ L Y T+G Sbjct: 74 TNAFVYGGEAAFLVSEPVIEQMGAPDVDVRVTTTRLGAQAGYDL-GRFLPYGTLGVARMT 132 Query: 145 KYETGKAGEITPIAIGGTAGVGVEVG 170 +T G+ + G AG+GVE Sbjct: 133 FQDTVGFGDTSSF--GTFAGLGVEYQ 156 >gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T] gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301] gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227] gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 2457T] gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301] gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227] gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T] gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70] gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71] gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671] gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71] gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6] gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218] gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272] gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304] gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227] Length = 348 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT-- 196 G + + GVE ++ + RLEY+ + + + + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGL 186 Query: 197 ISLGVGMKF 205 +SLGV +F Sbjct: 187 LSLGVSYRF 195 >gi|163852164|ref|YP_001640207.1| porin [Methylobacterium extorquens PA1] gi|240139496|ref|YP_002963971.1| putative outer membrane protein [Methylobacterium extorquens AM1] gi|254561910|ref|YP_003069005.1| outer membrane protein [Methylobacterium extorquens DM4] gi|163663769|gb|ABY31136.1| porin [Methylobacterium extorquens PA1] gi|240009468|gb|ACS40694.1| putative outer membrane protein [Methylobacterium extorquens AM1] gi|254269188|emb|CAX25154.1| putative outer membrane protein [Methylobacterium extorquens DM4] Length = 285 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 66/247 (26%), Gaps = 62/247 (25%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSA 62 + A+ + A +A AAD RR + P + G YAGL Sbjct: 1 MIRALLLGGTAALVSTAALAADLPRRE----------APPIAFAPVPVFTWTGFYAGLHT 50 Query: 63 LYN--------------------------GSFGEEAHHNAGGSIFAGYNVED---SCIMY 93 Y S E + GYN + + Sbjct: 51 GYAFTDNPNIQTRGNDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNHQFTPGGGFVA 110 Query: 94 GVEGDVRYTVPVLADNIHSL--------------HGIGGSLRIRGGYEVSDSLLLYATVG 139 G+ D + + G++ + GY D +Y T G Sbjct: 111 GLAFDATWLDLDKRTGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAF-DRFFVYGTGG 169 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISL 199 + T G G ++ + +EY V+ F N S+ Sbjct: 170 LAFGHVSYGADFFNPGATVLQYT-GGGRKIFETGYNYGGGIEYAI----PVDSFLNYFSV 224 Query: 200 G--VGMK 204 G +G+K Sbjct: 225 GRWLGIK 231 >gi|115524901|ref|YP_781812.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris BisA53] gi|115518848|gb|ABJ06832.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris BisA53] Length = 250 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 31/155 (20%) Query: 48 PIRHDFNGPYAGLSALYNGS--------------FGEEAHHNAGG--SIFAGYNVEDSCI 91 +D++G Y G + + S E H +GG GY + S + Sbjct: 34 APVYDWSGFYLGGNGGWGSSRKCWDFVDAAGSFLTSEGCHDASGGTAGGQLGYRWQASNL 93 Query: 92 MYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 ++GVE + ++ + G+ + G ++L+ G + Sbjct: 94 VFGVEAQGNWADFNGSNVSIAFPTVVNATKVDSFGTFTGQIGNAWGNTLVYLKAGGAVTS 153 Query: 144 Q---KYETGKAGEITPI----AIGGTAGVGVEVGG 171 Y T +I+ G G+GVE G Sbjct: 154 DRYTGYLTSNGVQISDTVKDNRWGAVVGLGVEYGF 188 >gi|261213963|ref|ZP_05928244.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|260915570|gb|EEX82431.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] Length = 62 Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 16/63 (25%) Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVE---------------GFYNTISLGVG 202 G AG GV+ +++++ RLEYR + Y + + I LGV Sbjct: 1 MTGWAAGAGVDYAA-TDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVA 59 Query: 203 MKF 205 KF Sbjct: 60 YKF 62 >gi|75675759|ref|YP_318180.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi Nb-255] gi|74420629|gb|ABA04828.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi Nb-255] Length = 258 Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 54/187 (28%), Gaps = 34/187 (18%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSF--------------GEEAHHNAGG--SIFA 82 T A + +D++G Y G + + S E H+ GG Sbjct: 32 YTKAPPPMMAAIYDWSGFYIGANGGWGSSRNCWDFTTPAGVFVANEGCHNATGGTAGGQI 91 Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLL 134 GY + + ++G+E + + +S G + GY D+ LL Sbjct: 92 GYRWQATNWLFGLEAQGNWADLSGRNVSLAFPAFTNNSNLNAFGLFTGQIGYAW-DATLL 150 Query: 135 YATVGPDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 Y G V + G GVG+E G + + EY Sbjct: 151 YVKGGAAVTSNRYRSLVTATGVQATDSVNNNRWGAVVGVGLEY-GFAPNWSLAFEYDHIF 209 Query: 187 YSKVEGF 193 Sbjct: 210 MGNSRHT 216 >gi|213419602|ref|ZP_03352668.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 287 Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G + G F GY V Sbjct: 40 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 93 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DN + + G L + GY ++D L +Y +G A Sbjct: 94 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 151 Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G T + G+E ++ + RLEY+ + Sbjct: 152 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 194 >gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 371 Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 78/231 (33%), Gaps = 59/231 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ G + G F GY V G E + Y P D Sbjct: 52 KLGWSQYHDTGFINNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 106 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAG----EITPIAIG 160 NI+ + G L + GY ++D L +Y +G K G + + Sbjct: 107 NINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGPGGASNKDHDTGVS 166 Query: 161 GTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 G+E ++ + RLEY+ + + + + +S+GV +F Sbjct: 167 PVFAGGIEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 216 >gi|293395760|ref|ZP_06640042.1| outer membrane protein A [Serratia odorifera DSM 4582] gi|291421697|gb|EFE94944.1| outer membrane protein A [Serratia odorifera DSM 4582] Length = 352 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 35/194 (18%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFG-----------------EEAHHNAGGSIFA 82 + + Y G ++ F + N G +FA Sbjct: 15 AVTPAFAAADTGTW---YGGAKLGWSHYFDASADKDFSDNLDHATDFDFNKDNTTGGVFA 71 Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYAT 137 GY + VEG Y + + + + G + + + Y ++D+ LY Sbjct: 72 GYQI---NSWLAVEGGYDYLGNMQINGNNGVAGAKLASQGLQLSMKASYGLTDNWDLYGR 128 Query: 138 VGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VE 191 G + + A VG E +++ R+EY+ S V Sbjct: 129 AGAMAYRAETEHAGHSAFETGVRPLAAVGTEY-AFNDNWAGRVEYQWVSNVGNVNQIGVS 187 Query: 192 GFYNTISLGVGMKF 205 ++++ GV +F Sbjct: 188 ADVSSLTAGVVYRF 201 >gi|27381635|ref|NP_773164.1| hypothetical protein bll6524 [Bradyrhizobium japonicum USDA 110] gi|27354803|dbj|BAC51789.1| bll6524 [Bradyrhizobium japonicum USDA 110] Length = 271 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 31/163 (19%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--------------GYNVEDSCIMYGVE 96 ++++G Y G + + S G G++ GY + + + G+E Sbjct: 59 YNWSGFYIGANGGWGQSHGCVDFVTPAGTVAGGCADRSGGLAGGQIGYRWQTNQFVLGLE 118 Query: 97 GDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 + + G + G+ + S L Y G V + Sbjct: 119 AQGDWAEIKNTRVSLIDPLISTTGKTDAIGLFTAQLGWAWNAS-LFYVKGGAAVTRNRFD 177 Query: 149 -------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 GG GVG E G + + A +EY Sbjct: 178 IFNNVTGVGLASAGHTRWGGALGVGWEY-GFAPNWSAGIEYDH 219 >gi|77463270|ref|YP_352774.1| outer membrane protein [Rhodobacter sphaeroides 2.4.1] gi|77387688|gb|ABA78873.1| possible outer membrane protein [Rhodobacter sphaeroides 2.4.1] Length = 200 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%) Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 D++G Y G Y + + + + A G + AGY + + G E T L Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 S +L++ G ++ LLYAT G A G G G+G + Sbjct: 105 IPDSELDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159 Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205 +++ E R + S V+ T+ VG +F Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200 >gi|126462144|ref|YP_001043258.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC 17029] gi|126103808|gb|ABN76486.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC 17029] Length = 200 Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%) Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 D++G Y G Y + + + + A G + AGY + + G E T L Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 S +L++ G ++ LLYAT G A G G G+G + Sbjct: 105 IADSELDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159 Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205 +++ E R + S V+ T+ VG +F Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200 >gi|332558148|ref|ZP_08412470.1| outer membrane protein [Rhodobacter sphaeroides WS8N] gi|332275860|gb|EGJ21175.1| outer membrane protein [Rhodobacter sphaeroides WS8N] Length = 200 Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%) Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 D++G Y G Y + + + + A G + AGY + + G E T L Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 S +L++ G ++ LLYAT G A G G G+G + Sbjct: 105 IADSEVDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159 Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205 +++ E R + S V+ T+ VG +F Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200 >gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1] gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1] Length = 389 Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 82/225 (36%), Gaps = 43/225 (19%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY-AG 59 +K+ ++ALA F + AQAA Y + ++G + Sbjct: 39 RKMKNTAIALAVALAGFATLAQAA---------------PRDNTWYAGAKVGWSGYHDTL 83 Query: 60 LSALYNGSF-GEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHS 112 ++ Y G G G F GY + G+E G + Y+ V + Sbjct: 84 MNHTYKGVGDGSTRKDQLGAGAFLGYQINQ---YLGLEMGYDWFGRMHYSGDVKNGAFKA 140 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV------G 166 HG+ L + Y V + L +Y +G + + TG G+ GV G Sbjct: 141 -HGVQ--LAAKLSYPVLEDLDVYTRLGGMLWRADSTGNLGDPRKKIRDYDIGVSPVAAVG 197 Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNT------ISLGVGMKF 205 +E L+++ V RL+Y+ E T +SLGV +F Sbjct: 198 LEY-ALTQNWVTRLDYQFVNNMGDEATLGTRPDNTNLSLGVAYRF 241 >gi|221639135|ref|YP_002525397.1| outer membrane protein [Rhodobacter sphaeroides KD131] gi|221159916|gb|ACM00896.1| outer membrane protein [Rhodobacter sphaeroides KD131] Length = 200 Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%) Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 D++G Y G Y + + + + A G + AGY + + G E T L Sbjct: 45 DWSGFYVGGQLGYGKVDTNIDDLDGNGAIGGLHAGYRYDFGRAVVGAELAYDVTNIDLDG 104 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 S +L++ G ++ LLYAT G A G G G+G + Sbjct: 105 IPDSEVDNVTTLKLMAGGKMGKG-LLYATAGGSWADASIGGADVSD----NGYVYGIGYD 159 Query: 169 VGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205 +++ E R + S V+ T+ VG +F Sbjct: 160 Y-MVNDRWSVGAELLRHTWDDFDDSGVDVDATTLQAKVGFRF 200 >gi|213580658|ref|ZP_03362484.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 296 Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G + G F GY V Sbjct: 40 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 93 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DN + + G L + GY ++D L +Y +G A Sbjct: 94 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 151 Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G T + G+E ++ + RLEY+ + Sbjct: 152 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 194 >gi|332561456|ref|ZP_08415769.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N] gi|332273958|gb|EGJ19276.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N] Length = 160 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 16/167 (9%) Query: 47 VPIRHDFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103 D++G Y G Y N + A G + AGY + + G E + Sbjct: 2 AAPVTDWSGFYVGGQLGYGDINTDIDGYDGNGAIGGVHAGYRYDFGRAVVGAELAYDISN 61 Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163 + D L + +L++ G ++ LLYATVG A + G Sbjct: 62 IEIGDADDELDNL-ATLKLMAGGKI-GRGLLYATVGGTWADVSSDAGDPDD-----GYVY 114 Query: 164 GVGVEVGGLSESLVARLE-YRAS----KYSKVEGFYNTISLGVGMKF 205 G+G + L++ E R + + + T+ VG +F Sbjct: 115 GIGYD-HMLNDRWSIGAELLRHTWDSFDDAGTDADATTLQAKVGFRF 160 >gi|170694344|ref|ZP_02885498.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gi|170140767|gb|EDT08941.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length = 172 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 55/174 (31%), Gaps = 30/174 (17%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94 A F GPY G N G+F + +H+ AGYN + + G Sbjct: 20 PCAQAAPQAGASQFAGPYVGFKLGVNNSDASGAFNKASHNTVFPGFTAGYNFDVQRFVVG 79 Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154 E + GI + G + + Y G G+ Sbjct: 80 AEA---FADLHHGSTTFKDAGID----AKFGMPF-NQFMPYIRAG----------FTGDD 121 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 G+GV+ +E + A E+ + S +G N+ ++GV F Sbjct: 122 PDTRFHW--GLGVDY-KFAEHVSAVAEWT-TDSSHHDGTKRTNNSFTVGVQYHF 171 >gi|323138001|ref|ZP_08073075.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242] gi|322396720|gb|EFX99247.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242] Length = 702 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 47/188 (25%), Gaps = 59/188 (31%) Query: 50 RHDFNGPYAGLSAL---------------------YNGSFGEEAHHNAGGSIFAGYNVED 88 ++ G Y G S Y+ GYN +D Sbjct: 25 VFNWVGMYLGASLGAAFPLHGGERLQAGSGFGSPVYDLYPAGATRPGVTVGAQVGYNWQD 84 Query: 89 SCIMYGVEGDVRYTVPVLADNIH-------------------SLHGIGGSLRIRGGYEVS 129 ++G E D+ N S S+R R G+ Sbjct: 85 GPWVWGFETDLSLLDGRRGPNGLFASSDAYAPGLPVYTLHPGSSANYFASIRGRVGFAY- 143 Query: 130 DSLLLYATV---------------GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 D LLY T G D + + + G G E ++ Sbjct: 144 DRALLYLTGGVAAGGARGPETLTLGADGPDAIFEAPWSQSS--RMKYVFGAGFEY-AFAD 200 Query: 175 SLVARLEY 182 + AR EY Sbjct: 201 NWSARAEY 208 >gi|90424260|ref|YP_532630.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris BisB18] gi|90106274|gb|ABD88311.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris BisB18] Length = 251 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 31/155 (20%) Query: 48 PIRHDFNGPYAGLSALYNGSF--------------GEEAHHNAGG--SIFAGYNVEDSCI 91 + ++G Y G + + S E H GG GY + + + Sbjct: 34 APVYGWSGFYLGGNGGWGSSRKCWDFVNAAGSFLSSEGCHDATGGTAGGQVGYRWQAANM 93 Query: 92 MYGVEGDVRYTVPVLAD--------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 ++GVE + ++ + G + G ++L+ G + Sbjct: 94 VFGVEAQGNWADFNGSNISVAFPTVVNATKVDSFGLFTGQIGNAWGNTLVYLKAGGAVTS 153 Query: 144 QKY-------ETGKAGEITPIAIGGTAGVGVEVGG 171 +Y + + G G+GVE G Sbjct: 154 DRYTGYLTSNGVQISDAVKDTRWGAVVGLGVEYGF 188 >gi|300023262|ref|YP_003755873.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC 51888] gi|299525083|gb|ADJ23552.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC 51888] Length = 240 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 27/149 (18%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR------------YTVPVLADNIHSLH-- 114 + + N G + N + GV D Y N+ Sbjct: 59 TDSSSTNWNGGLTVAANWRLQNAVIGVAVDYDPFGSTQGLGCLYYWSDGGQSNVFVSDVQ 118 Query: 115 --------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET----GKAGEITPIAIGGT 162 S + G+ VS + +Y G V++ + ++ G T Sbjct: 119 SGRCTRDVAWSASFVGKIGWLVSPTTWVYGLGGWTVSRVEQNFEKSFNLEQVHATLDGAT 178 Query: 163 AGVGVEVGGLSESLVARLEYRASKYSKVE 191 G G+E L+E+ +E R +K + VE Sbjct: 179 FGGGIEYR-LTENWHVNVELRYTKLNTVE 206 >gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC 35316] gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316] Length = 358 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 78/220 (35%), Gaps = 39/220 (17%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA Y + ++ + Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGGKLGWSQFH--D 49 Query: 61 SALYNGSF---GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSL 113 + YN S G G F GY V G E + Y P DN++ Sbjct: 50 TGWYNSSLNNDGPTHESQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDNVNGA 104 Query: 114 HGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGVEVGG 171 G L + GY V+D L +Y +G V + + AG+ + GVE Sbjct: 105 FKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSNSIAGDDHDTGVSPVFAGGVE-WA 163 Query: 172 LSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205 ++ + RLEY+ + V +S+GV +F Sbjct: 164 MTRDIATRLEYQWVNNIGDGATVGVRPDNGMLSVGVSYRF 203 >gi|157376762|ref|YP_001475362.1| OmpA domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319136|gb|ABV38234.1| OmpA domain protein transmembrane region-containing protein [Shewanella sediminis HAW-EB3] Length = 184 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 6/135 (4%) Query: 49 IRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 +D G Y G S ++ G + GYN +G+E ++ + + Sbjct: 22 AANDHTGFYVGGSLGQLKLKAGDSESGVGIGAYGGYNF---NEWFGLEANMFVSGDLGDS 78 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGV 167 G + + Y++ D+ +Y VG G GVGV Sbjct: 79 RTDLGAGTF-AFTPKFTYQIDDTFSVYGKVGIASMAVVARPDYLRNEDFTGFGWAYGVGV 137 Query: 168 EVGGLSESLVARLEY 182 +E+L RL Y Sbjct: 138 NASM-TENLNIRLGY 151 >gi|77404769|ref|YP_345342.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1] gi|77390419|gb|ABA81601.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1] Length = 250 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 71/209 (33%), Gaps = 48/209 (22%) Query: 32 HGGRGVVPTIATNRYVPIR--HDFNGPYAGLSALY-----NGSFGEEAHHNAGGSIF--- 81 GG VVP A + +D++G + G Y + S + G++ Sbjct: 23 AGGPIVVPMEAPVTALAPSGTYDWSGFWIGGGLGYGSTNYDISGDADLAEGQSGALELPD 82 Query: 82 -----------AGYNV----------EDSCIMYGVEGDVRYTVPV-----LADNIHSLHG 115 AGY + ++ D ++ + +I Sbjct: 83 LGGQGGLLSLEAGYAYALAPRWILAGQLDYAFGNIDNDADLSLDGELSLDASYDIKVKSM 142 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKY-------ETGKAGEITPIAIGGTAGVGVE 168 + G+ R GY SD+ ++Y G A+ T + + G T G G+E Sbjct: 143 MAGT--ARLGYLPSDTTMIYGLAGLTRAKFEADYSVSGVTSGGYDFSDT--GLTIGAGME 198 Query: 169 VGGLSESLVARLEYRASKYSKVEGFYNTI 197 L+E + +LEYR +K+ F + Sbjct: 199 TR-LTEKIGLKLEYRYTKFDDYTIFDGNV 226 >gi|91978374|ref|YP_571033.1| hypothetical protein RPD_3911 [Rhodopseudomonas palustris BisB5] gi|91684830|gb|ABE41132.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 264 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 60/177 (33%), Gaps = 42/177 (23%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV----------RYTVPVLADNI-------- 110 G + G F GYN + ++ G+E + Y + + N Sbjct: 90 GTTSSRGQGYGGFVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRMFSSNNVPYDVDYT 149 Query: 111 -HSLHGIG--GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------------- 152 + + GS R+R G+ S L YA G + Q A Sbjct: 150 ASASIKVNDVGSARLRAGWAF-GSFLPYAFGGVALGQADIIRTAMISGTQNGVRFTPLVS 208 Query: 153 ---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK-VEGFYNTISLGVGMKF 205 + G + G+G++ + L R E+ K++ + +T+ GVG KF Sbjct: 209 NQIQNGHFIYGYSGGLGID-MMVYRGLFVRAEWEYQKFAAPINTAVSTVRAGVGYKF 264 >gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a] Length = 327 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 63/183 (34%), Gaps = 33/183 (18%) Query: 47 VPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 P + + Y G ++ G + G F GY V G E Sbjct: 1 APKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPYVGFE-- 52 Query: 99 VRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKA 151 + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 53 MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPG 112 Query: 152 G---EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVG 202 G + + GVE ++ + RLEY+ + + + + +SLGV Sbjct: 113 GASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVS 171 Query: 203 MKF 205 +F Sbjct: 172 YRF 174 >gi|289809683|ref|ZP_06540312.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 264 Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 24/148 (16%) Query: 57 YAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----P 104 YAG ++ + G + G F GY V G E + Y P Sbjct: 5 YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMP 59 Query: 105 VLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITP---IA 158 DN + + G L + GY ++D L +Y +G A G T Sbjct: 60 YKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTG 119 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASK 186 + G+E ++ + RLEY+ + Sbjct: 120 VSPVFAGGIEY-AITPEIATRLEYQWTN 146 >gi|7188820|gb|AAF37888.1|AF234270_1 outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 249 Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + G+E ++ + RLEY+ + Sbjct: 128 KSNVPGGPSTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170 >gi|126668019|ref|ZP_01738983.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17] gi|126627529|gb|EAZ98162.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17] Length = 211 Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 29/190 (15%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNA----------GGSIFAGYNVEDSCI 91 A G Y G +N + E + N+ G+ FAGY + Sbjct: 19 APMASAAPTVTATGFYLGAQTGWNDTTLEGSSSNSLVEGNSASGVSGAAFAGYQAKIPNG 78 Query: 92 MYGVEGDVRYTVPVLADNIHSL-----HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ-- 144 + +E + + + + + R G +++ S Y VG Sbjct: 79 ILAIEVNAGASSAEFEKTETAARQLITSDMSYGISARLGTDIARSTQFYGLVGYQSTDFE 138 Query: 145 --KYETGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS-----KYSKVEGF 193 ++ + + + G + G G++ ++++L R+++ + + ++ Sbjct: 139 LTLEDSTPGSVANFKDSKSSAGASIGFGIQAQ-ITDALAMRVQWTRTLHDEKTFGDLKLD 197 Query: 194 YNTISLGVGM 203 +T + +G+ Sbjct: 198 PSTSQVSIGV 207 >gi|170750855|ref|YP_001757115.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans JCM 2831] gi|170657377|gb|ACB26432.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans JCM 2831] Length = 210 Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 69/194 (35%), Gaps = 17/194 (8%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 ++L + + + L AA + G + + G YA LS Sbjct: 11 RRLAAGLVLGACWLP--AGPAAAQALFWPSIGFAPLPSFAWPQMPEDAYGRWTGSYARLS 68 Query: 62 ALYNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRY------TVPVLADNIHSL 113 Y S +G ++ G ++ I+YG+ G Y + + Sbjct: 69 TGYAVSTSRHFGSYSGPTVGFEGGRMWQEGPILYGISGGFDYLAGLGGNLTPGYGRLAYS 128 Query: 114 HGIGGSLRIRGGYEVSDSLLLYA-TVGPDVAQKYETGKAG-----EITPIAIGGTAGVGV 167 + GSL ++ G V+ +L+YA T + Q G IA+ AGVGV Sbjct: 129 NDFAGSLEVKVGTLVAPDVLVYAKTGALALHQTLRVGPTPGSLPFTRQDIAVRPVAGVGV 188 Query: 168 EVGGLSESLVARLE 181 E +++ L +E Sbjct: 189 E-WAVTDRLSLAVE 201 >gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1] gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1] Length = 362 Score = 49.3 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 77/220 (35%), Gaps = 39/220 (17%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA Y + ++ + Sbjct: 10 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGGKLGWSQFH--D 52 Query: 61 SALYNGSF---GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSL 113 + YN G + G F GY V G E + Y P D ++ Sbjct: 53 TGWYNDDLNNNGPTHNSQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDKVNGA 107 Query: 114 HGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGVEVGG 171 G L + GY ++D L +Y +G + + + AG+ + GVE Sbjct: 108 FKAQGVQLTAKLGYPITDDLDIYTRLGGMIWRADSSNSIAGDNHDTGVSPLVAGGVE-WA 166 Query: 172 LSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205 ++ + RLEY+ + V +SLGV +F Sbjct: 167 ITRDIATRLEYQWVNNIGDAGTVGVRPDNGMLSLGVSYRF 206 >gi|146342734|ref|YP_001207782.1| hypothetical protein BRADO5904 [Bradyrhizobium sp. ORS278] gi|146195540|emb|CAL79567.1| hypothetical protein with a putative signal peptide; putative pertactin (N-terminal) and outer-membrane immunogenic protein (C-terminal) [Bradyrhizobium sp. ORS278] Length = 603 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 49/184 (26%), Gaps = 58/184 (31%) Query: 78 GSIFAGYNVED-SCIMYGVEGDVRYTVPVLADNI----------------HSLHGIGGSL 120 G GYN + ++GVEGD+ A + S Sbjct: 413 GGGQVGYNYQFAGSWVFGVEGDIGAANIHGARTVGNQAFGAGLTSAYFVAEDKTNWVASA 472 Query: 121 RIRGGYEVSDSLLLYATVGPD-------------------------VAQKYETGKAGEIT 155 R GY + L Y G + +G I+ Sbjct: 473 TARLGYGL-GRTLWYVKGGAAFEDGRTTATCYNPNGVAIGSVCNNAAGVVFASGTGFGIS 531 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY--------------NTISLGV 201 +G T G G E L + A+ EY + + + + +G+ Sbjct: 532 NTRVGWTIGYGTEFD-LGRNWSAKAEYDYLSFGRYRALSSDGTTTLSAKADSISQVKIGL 590 Query: 202 GMKF 205 +F Sbjct: 591 NYRF 594 >gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032] gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032] Length = 355 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 74/223 (33%), Gaps = 51/223 (22%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + YAG Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YAGG 40 Query: 61 SALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLAD 108 ++ + G G F GY V G E + Y P D Sbjct: 41 KLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGD 95 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVG 166 ++ G L + GY V+D L +Y +G V + + G+ + G Sbjct: 96 TVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSSNIGGDDHDTGVSPVFAGG 155 Query: 167 VEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 VE ++ + RLEY+ V + L VG+ + Sbjct: 156 VE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVGVSY 197 >gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103] gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103] Length = 367 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 75/227 (33%), Gaps = 47/227 (20%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----G 55 +K+ ++ALA F + AQAA Y + ++ G Sbjct: 9 RKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQYHDTG 53 Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIH 111 Y Y + G G FAGY + G E + Y P + ++ Sbjct: 54 YY---GNGYQNNDGPTHESQLGAGAFAGY---QANPYLGFE--LGYDWLGRMPNKGNQVN 105 Query: 112 SLHGIGG-SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAG---EITPIAIGGTAG 164 G L + Y ++D L +Y +G + G + A Sbjct: 106 GAFKAQGIQLAAKLSYPIADDLDIYTRLGGMVWRADSTQQNLATGTRISDHDTGVSPLAA 165 Query: 165 VGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 VGVE L+++ RL+Y+ V + +SLGV +F Sbjct: 166 VGVEY-ALTKNWATRLDYQWVNNIGDAQTVGARPDNGMLSLGVSYRF 211 >gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894] gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894] Length = 358 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 27/183 (14%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G G F GY V Sbjct: 27 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPY 80 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 G E + Y P D ++ G L + GY V+D L +Y +G V + Sbjct: 81 VGFE--MGYDWLGRMPYKGDTVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADS 138 Query: 148 TGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVG 202 + G+ + GVE ++ + RLEY+ V + L VG Sbjct: 139 SSNIGGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVG 197 Query: 203 MKF 205 + + Sbjct: 198 VSY 200 >gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2] gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2] Length = 356 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 75/217 (34%), Gaps = 35/217 (16%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA Y + ++ + Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQFHDIG 51 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGI 116 + + + G G F GY V G E + Y P + Sbjct: 52 NNRIDNN-GPTHESQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGSEQNGAFKA 105 Query: 117 GG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSE 174 G L + GY ++D L +Y +G V + G + + GVE ++ Sbjct: 106 QGVQLTAKLGYPITDDLDVYTRLGGMVWRADAKNNDGFKDHDTGVSPVFAGGVEY-AITP 164 Query: 175 SLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 + RLEY+ + + V G + +S+GV +F Sbjct: 165 EIATRLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 201 >gi|77748528|ref|NP_640827.2| membrane protein [Xanthomonas axonopodis pv. citri str. 306] Length = 279 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 27/166 (16%) Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112 A + + GG+ + GY+ + +YGV + + + S Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSVSAFSTTPA 139 Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156 +LR R GY L Y T G + Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANSFTSSGGD 199 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 A G AG+G++ LS+ + +EY ++ + + +G G Sbjct: 200 SADGYQAGIGLQ-RRLSDKVSVGVEYLFTRLQDDDT---RVRVGPG 241 >gi|149201160|ref|ZP_01878135.1| possible outer membrane protein [Roseovarius sp. TM1035] gi|149145493|gb|EDM33519.1| possible outer membrane protein [Roseovarius sp. TM1035] Length = 197 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 15/142 (10%) Query: 52 DFNGPYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLA 107 ++ G YAG Y + G + AGY+ + + G+ D + L Sbjct: 46 NWTGFYAGGQLGYGDVDTGAAGVDGDGLIGGLIAGYDYDYGNNWVVGLGLDYDFADIDLG 105 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167 ++ R GY+V + LLY T G A +T G+ G G G Sbjct: 106 AAASLEDVFR--IKSRLGYKVGNG-LLYGTGGYAWA---DTDTLGDD----NGYFFGAGY 155 Query: 168 EVGGLSESLVARLEYRASKYSK 189 E +S++L E K+ Sbjct: 156 E-HMISQNLSLGGEVLYHKFEN 176 >gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 352 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 16/138 (11%) Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHS 112 YA + GS + +F GYNV + +EG YT + D H Sbjct: 46 YAAGTYGNPGSEYRIDRDDFAAGLFMGYNVTP---WFAIEG--GYTWLGEVTLKGDKYHD 100 Query: 113 LHGIGGSLRIRGG---YEVSDSLLLYATVG--PDVAQKYETGK-AGEITPIAIGGTAGVG 166 + G Y+ +D + LY VG + ++ TAG+G Sbjct: 101 QGKVEQQAIDLVGKFTYQATDKVDLYTKVGGAWQFTRSKGLPGQTTTDRDDSLIATAGLG 160 Query: 167 VEVGGLSESLVARLEYRA 184 E +++L AR EY+ Sbjct: 161 AEYH-FTDNLSARAEYQY 177 >gi|90414598|ref|ZP_01222571.1| hypothetical protein P3TCK_14434 [Photobacterium profundum 3TCK] gi|90324314|gb|EAS40883.1| hypothetical protein P3TCK_14434 [Photobacterium profundum 3TCK] Length = 182 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 28/184 (15%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGD 98 TIA+ P +G Y G N + + G + AGYN + I+ GVEG+ Sbjct: 9 TIASLLSAPALASKDGFYIGTDLGSNRL--DSESFDTGIGLVAGYNFQITQQIVIGVEGE 66 Query: 99 VRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYETGKA 151 R D + + G L+ + Y +D+ YA + E K Sbjct: 67 YR---SYGKDKVTIIDGWSAELKAHSFGINVKPKYYFNDNF--YAGAQLGLHSVKEEFKE 121 Query: 152 G--------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS--KVEGFYNTISLGV 201 + + G + ++++ + Y+A V+ Y+T +G Sbjct: 122 DILGDVEKFSDSDTGLSYGLEAGYD---FNQNVTIKAGYKAISVEPLGVDSDYSTFYIGA 178 Query: 202 GMKF 205 KF Sbjct: 179 NYKF 182 >gi|332188913|ref|ZP_08390616.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17] gi|332011053|gb|EGI53155.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17] Length = 285 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 20/128 (15%) Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHS----------LHGIGGSLRIRGGYEVSDSL 132 G + + I+YGV G+ + + + S S R R GY ++ Sbjct: 114 GLDHQAGNIVYGVVGEFGKSEITDSVSAFSTTPAWYTMTRSIDWEASARGRLGYA-ANKT 172 Query: 133 LLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 L Y T G A+ A G G G+E + + +EY Sbjct: 173 LFYGTFGAGYARINREFATSNGANAFAISGDRNQFGFLGGGGIE-QKIGRNFSIGMEYMY 231 Query: 185 SKYSKVEG 192 +Y + Sbjct: 232 HQYRDDDT 239 >gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii] Length = 347 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 27/183 (14%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 G E + Y P D ++ G L + GY V+D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGDTVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADS 127 Query: 148 TGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVG 202 + G+ + GVE ++ + RLEY+ V + L VG Sbjct: 128 SSNIGGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVG 186 Query: 203 MKF 205 + + Sbjct: 187 VSY 189 >gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida LFI1238] Length = 355 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 15/142 (10%) Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR-----IRGGYE 127 + GG F GY + +S +G+E + T A + + G + + Y Sbjct: 74 RTDLGGGFFVGYQINES---WGIE--LGKTFLGAAKAEYFSRKVTGDMETIDLFGKYTYG 128 Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA--- 184 ++D + G E T + G G + L++ + +LEY+ Sbjct: 129 LTDRFGFFGKAGLANWNGKTKSDYVETTTFGHDLSVGFGAQY-ALNKRWLTQLEYQYINS 187 Query: 185 -SKYSKVEGFYNTISLGVGMKF 205 + E Y+ +S+G+ +F Sbjct: 188 IGDDTVGESDYHLMSIGIIYRF 209 >gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34] Length = 326 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 33/167 (19%) Query: 57 YAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 Y G A + S E N G +FAGY V + +E + Sbjct: 27 YIGARAGASFLTNMDDAVTSVSEIQDTNFTGGVFAGYQVTP---WFALETGYTHLGNAKL 83 Query: 108 DNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAIG 160 DN + G+ L + Y +SD++ ++A G + G Sbjct: 84 DNKQGSYEAQGADLVTKFSYAISDNVDIFAKAGAFYYDWNAIGSGVIKSD--------NG 135 Query: 161 G--TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 TAG G+E +++S RLEY+ Y+ V G G+G+ F Sbjct: 136 WSSTAGAGLEY-FINKSFSTRLEYQY--YNDVAGPDIHF-AGLGLAF 178 >gi|119387700|ref|YP_918734.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222] gi|119378275|gb|ABL73038.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222] Length = 416 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 37/164 (22%) Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119 A + +FAGY + + + G+E N +L +GG+ Sbjct: 271 EAWTEQLTDSFSEDGNSYGLFAGYRRQWQNNFVGGIEVHYGRN----GSNRFNLAELGGT 326 Query: 120 LRI---------RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 ++ + GY + L Y VG + T +G++ Sbjct: 327 VQFGKDTYGAELQAGYAIK-RALPYIAVGYA--NILDQDAM----------TVSLGLDY- 372 Query: 171 GLSESLVARLEYRASKYSKVEGFY---------NTISLGVGMKF 205 +++ L+ +Y + G N +SL +KF Sbjct: 373 AVTDRLIVGAKYTHYDIGDISGIDSIHRFEGDGNMVSLRAAIKF 416 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 1/56 (1%) Query: 9 GVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVP-IRHDFNGPYAGLSAL 63 + +AL + A P + + P I+ V + GPY G Sbjct: 1 MSNRIALILAATTFLASPAFSGGYVAPVIQPQISPVVEVARPAFSWTGPYVGAYIG 56 >gi|148255369|ref|YP_001239954.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. BTAi1] gi|146407542|gb|ABQ36048.1| putative outer-membrane immunogenic protein precursor [Bradyrhizobium sp. BTAi1] Length = 262 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 67/235 (28%), Gaps = 53/235 (22%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+KL LAV + +A AAD R P P+ + G Y Sbjct: 1 MKKLLLAVTAMAAMTG---TASAADLAAR---------PYTKAPIAAPLAPSWTGFYIFG 48 Query: 61 SALYNGSFGEEAHHNAG------------------GSIFAGYNVE-DSCIMYGVEGDVRY 101 + ++ G++ AGY+ + + + G D ++ Sbjct: 49 GGGGGLWNADTTINSTATGAALIGLNQKQGGEGWFGTVGAGYDWQVNPTWVIGAFADGQF 108 Query: 102 TVPVLADNIHS-------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG----- 149 + ++ R GY V+ ++L Y G + T Sbjct: 109 GSIKGTIQDQGALIAGNIKNDYSWAVGGRVGYLVAPNVLSYVNAGYSSSHWKGTTLLSTV 168 Query: 150 -----KAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGFY 194 G G GVE G + + EYR++ Y + Sbjct: 169 TGGASGLHTDGFDRSGWFIGGGVENNLNIFGISAPGWFMKTEYRSAFYDRKNISE 223 >gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280] gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280] Length = 370 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 57 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 169 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 170 GGVEY-AITPEIATRLEYQWTN 190 >gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 359 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 71/216 (32%), Gaps = 31/216 (14%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY-AG 59 QK+ ++ALA F + AQAA Y + ++ + G Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYAGGKLGWSQFHDTG 51 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG- 118 N + G G F GY V G E + + + Sbjct: 52 WYNSANNNDGPTHESQLGAGAFGGYQV---NPYVGFEMGYDWLGRMPYKGNETNGAFKAQ 108 Query: 119 --SLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIAIGGTAGVGVEVGGLSES 175 L + GY V+D L +Y +G V + AG+ + GVE ++ Sbjct: 109 GVQLTAKLGYPVTDDLDVYTRLGGMVWRADSSNSNAGDDHDTGVSPVFAGGVE-WAMTRD 167 Query: 176 LVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205 + RLEY+ + V +S+GV +F Sbjct: 168 IATRLEYQWVNNIGDGATVGVRPDNGMLSVGVSYRF 203 >gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89] gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA] gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89] gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA] Length = 375 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 28 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 61 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 62 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 116 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 117 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 174 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 175 GGVEY-AITPEIATRLEYQWTN 195 >gi|294627228|ref|ZP_06705815.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667706|ref|ZP_06732918.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598467|gb|EFF42617.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292602546|gb|EFF45985.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 279 Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 27/166 (16%) Query: 60 LSALYNGSFGEEAHHNAGGSIFA---GYNVEDSCIMYGVEGDVRYTVPVLADNIHS---- 112 A + + GG+ + GY+ + +YGV + + + S Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSVSAFSTTPA 139 Query: 113 ------LHGIGGSLRIRGGYEV--SDSLLLYATVGPDVAQ--------KYETGKAGEITP 156 +LR R GY L Y T G + Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANSFTSSGGD 199 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 A G AG+G++ LS+ + +EY ++ + + +G G Sbjct: 200 SADGYQAGIGLQ-RRLSDKVSVGVEYLFTRLQDDDT---RVRVGPG 241 >gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii] Length = 347 Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 27/183 (14%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG--------SFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGFIPNDGPTHESQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 G E + Y P D ++ G L + GY V+D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGDTVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVWRADS 127 Query: 148 TGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVG 202 + AG+ + GVE ++ + RLEY+ V + L VG Sbjct: 128 SSNIAGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAQTVGARPDNGMLSVG 186 Query: 203 MKF 205 + + Sbjct: 187 VSY 189 >gi|154252136|ref|YP_001412960.1| OmpA domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156086|gb|ABS63303.1| OmpA domain protein transmembrane region-containing protein [Parvibaculum lavamentivorans DS-1] Length = 184 Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 26/202 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + + +AL A AA G + P G Y G Sbjct: 8 MKTALRTICAAGVALGLAGFASAASAQETETRGNIYN-----QTHFQP------GLYVGG 56 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + S ++ G AG+ + + G D+ + + S G+ Sbjct: 57 GLGWGWSDDDDDWTWKG---IAGWRLNQYLAVQGFYADL---TDITVAGVSSDVDTFGA- 109 Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 + + VSD++ +Y G Y+ +G T AG GV+ LS+++ R Sbjct: 110 ELLASFPVSDTMAIYGKGGL---HNYDEVGSGRDTS----WLAGAGVDF-ALSDNMSLRT 161 Query: 181 EYRASKYSKVEGFYNTISLGVG 202 E+ + ++ + G Sbjct: 162 EWTHYDLDSDDVDEASVQIVFG 183 >gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C] Length = 365 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 52 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 164 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185 >gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101] gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101] Length = 365 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 52 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 164 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185 >gi|241761569|ref|ZP_04759656.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373877|gb|EER63410.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 270 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 43/233 (18%) Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71 + A Q A V + V P T + + + GL + + Sbjct: 41 TSASDGSAPVQDAPVVAQDTVAQPAVQPVPLTPDPNEVANHSGIKFRGLRVEGDIGWTRA 100 Query: 72 AHHNAGGSIFAGYN-------VEDSCIMYGVEG-----------DVRYTVPVLADNIHSL 113 ++ G GY V D+ ++GVEG + + + + + Sbjct: 101 QANHTTGRNNMGYGGTLGVDAVVDNFFVFGVEGSYWNPSKMWEKNAGNNIALGSQGNNIG 160 Query: 114 H-------------GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI--- 157 +LR G+ + LL+Y G ++ G Sbjct: 161 QIGTDSYSARKMFQEWDATLR--MGFLPTKDLLIYMAGGYASGKQRNVSVNGAGVAAPNS 218 Query: 158 -----AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + G + G G+E ++++ +YR +++ + +LG G +F Sbjct: 219 KYVGWSNGYSVGGGIEYS-ITKNFFMNAQYRWTQFGNHTS-RSRATLGFGFRF 269 >gi|329851836|ref|ZP_08266517.1| membrane protein [Asticcacaulis biprosthecum C19] gi|328839685|gb|EGF89258.1| membrane protein [Asticcacaulis biprosthecum C19] Length = 278 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 61/205 (29%), Gaps = 66/205 (32%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYN----------------GSFGEEAHHNAGGSIF---- 81 A D+ GPY G++A + G++G+ + AG + F Sbjct: 17 AAGAPAAWSQDWAGPYVGVAAGMSNIADDNETVEFDTNLDGAYGDTVNTFAGANAFSPGF 76 Query: 82 --------------------------AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG 115 AGY+ + ++GV G+V + S Sbjct: 77 CTGAANGRTPGEGCAKQREEAGIGLRAGYDWQVGNWVFGVVGEVTNANFEDSVTAFSTTP 136 Query: 116 IG----------GSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPI 157 +LR + GY + D +Y T G A Sbjct: 137 ANYVFTRDIENINALRGKAGYVMGD-WQVYLTAGYAQADIERTFRTSNALNSFTATDGDD 195 Query: 158 AIGGTAGVGVEVGGLSESLVARLEY 182 + G G+G+E +S + +EY Sbjct: 196 SDGYQVGLGIE-QRISGRWIGGIEY 219 >gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2] gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2] Length = 348 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 30/176 (17%) Query: 57 YAGLSALYNGSFGEEAH-----------------HNAGGSIFAGYNVEDSCIMYGVE--- 96 YAG ++ F A N GG +F GY + + G Sbjct: 29 YAGGKFGWSHYFDTSASQQTGANGNKYGDVGFDSDNVGGGVFTGYQITPWLAVEGGYDYL 88 Query: 97 GDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 G++++ A G+ SL+ Y ++D+ LY G + K Sbjct: 89 GNMQFNGKNGASGSQMKSQGLQLSLKA--SYGLTDNWDLYGRAGAMGYRAESDIKGNNRF 146 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205 + VG E +++ R+EY+ S V ++++ G+ +F Sbjct: 147 DTGVRPVVAVGTEY-AFNKNWAGRVEYQWVSNVGNENQIGVSSDVSSVTAGLSYRF 201 >gi|209886341|ref|YP_002290198.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5] gi|209874537|gb|ACI94333.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5] Length = 113 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 7/89 (7%) Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT------PIAIGGTAGVGVEVGGLS 173 +R + G+ V+ LL+YAT G A T + T + G G G EV Sbjct: 1 MRGKAGFAVNPQLLIYATGGAAFAGTRATDTFIDGTHDITAKATSSGWVVGAGGEVKLAR 60 Query: 174 ESLVARLEYRASKYSKVEGFYNTISLGVG 202 + EY + + +++ L G Sbjct: 61 QVSFG-FEYLYADFGNKSYAFDSSHLSGG 88 >gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638] gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein [Enterobacter sp. 638] Length = 351 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 65/189 (34%), Gaps = 33/189 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN------------GSFGEEAHHNAGGSIFAGYNVED 88 + P + + YAG ++ + G G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGWYNSSLNNDGPTHESQLGAGAFGGYQV-- 70 Query: 89 SCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVA 143 G E + Y P DN++ G L + GY V+D L +Y +G V Sbjct: 71 -NPYVGFE--MGYDWLGRMPYKGDNVNGAFKAQGVQLTAKLGYPVTDDLDVYTRLGGMVW 127 Query: 144 QKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNT 196 + + AG+ + GVE ++ + RLEY+ + V Sbjct: 128 RADSSNSIAGDDHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDGNTVGVRPDNGM 186 Query: 197 ISLGVGMKF 205 +S+GV +F Sbjct: 187 LSVGVSYRF 195 >gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736] gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736] Length = 370 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 57 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 169 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 170 GGVEY-AITPEIATRLEYQWTN 190 >gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1] gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1] Length = 370 Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 57 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 169 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 170 GGVEY-AITPEIATRLEYQWTN 190 >gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1] gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1] Length = 353 Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +K+ ++ALA F + AQAA P + + Y G Sbjct: 6 KKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 39 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 40 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 94 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 95 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 152 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 153 GGVEY-AITPEIATRLEYQWTN 173 >gi|254466120|ref|ZP_05079531.1| putative outer membrane protein [Rhodobacterales bacterium Y4I] gi|206687028|gb|EDZ47510.1| putative outer membrane protein [Rhodobacterales bacterium Y4I] Length = 180 Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 11/156 (7%) Query: 52 DFNGPYAGLSALYNG--SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109 D+ G Y G + + +A I AGYN + + G E D T L Sbjct: 32 DWTGFYLGGQIGQLDVDATNGASGDDAAYGIHAGYNYDFGRFVLGGELDYDTTDVDLGGG 91 Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 ++ GY+ + +L Y T G A + GE + + + Sbjct: 92 ATVDSVARAKVKA--GYDFGN-VLAYVTGGVAEADSSLGSETGEFYGVGLAYQV---TDQ 145 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + + LE+ + + S+ + F Sbjct: 146 WQIGGEV---LEHEFDDFGNSGVGADATSVSLRASF 178 >gi|220922127|ref|YP_002497428.1| porin [Methylobacterium nodulans ORS 2060] gi|219946733|gb|ACL57125.1| porin [Methylobacterium nodulans ORS 2060] Length = 284 Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 53/180 (29%), Gaps = 54/180 (30%) Query: 53 FNGPYAGLSALYNGS---------------------------FGEEAHHNAGGSIFAGYN 85 + G YAGL Y + F E G F GYN Sbjct: 42 WTGFYAGLHTDYVFTDRTRITTVGNTAVNAAAVAGLVRAPRIFTEVDGFANIGGGF-GYN 100 Query: 86 VED---SCIMYGVEGDVRYTV------------PVLADNIHSLHGIGGSLRIRGGYEVSD 130 + S ++ GV+ D +T PV G G+L R GY D Sbjct: 101 YQFTPGSGVVVGVQADWAWTDLEKNRGYLSPTVPVFGSAYRQGLGWLGTLVGRAGYAF-D 159 Query: 131 SLLLYATVGPDVAQ----------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 +Y G G+IT G G G+E +S +ARL Sbjct: 160 RFFVYGLGGLAYGDVTTGATFFNPGGVVAYTGQITDFRTGFAYGGGIEYAIPDDSFLARL 219 >gi|312115944|ref|YP_004013540.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC 17100] gi|311221073|gb|ADP72441.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC 17100] Length = 292 Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 54/162 (33%) Query: 46 YVPIRHDFNGPYAGLSAL-------------------------------------YNGSF 68 V + G Y G + + + Sbjct: 37 EVIPVQTWTGFYLGGNVGGAFVDNNNKNRWDDGEGPWHNVWEKVDHKWTEVPVSDVDHFW 96 Query: 69 GEEAHHN--AGGSIFAGYNVED--SCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRG 124 G +++ G + AG+N + S ++ G E D ++ V S R + Sbjct: 97 GNRNNNDSQFIGGVQAGFNWQRVGSPLVVGFEVDADFSDNV---------DYLVSARGKL 147 Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 G+ + +LLYAT G K G G T+G G Sbjct: 148 GFGFQN-VLLYATGGGAWIGLNNDNKFGYDDT---GWTSGWG 185 >gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146] Length = 365 Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 52 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 164 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185 >gi|307295040|ref|ZP_07574882.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1] gi|306879514|gb|EFN10732.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1] Length = 170 Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 10/154 (6%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNIH 111 F GP AG+ Y+ G + + GY++ I +G E V Sbjct: 26 FTGPRAGVIGGYDKLGG---NDGFTYGVSTGYDLAVTPNITFGPEVSFS-DTTVGGGGAE 81 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 + S+R GY V+ +L + VG + + + G G G+E Sbjct: 82 ISRDLAASVR--LGYVVNPRVLAFGKVGYANTRIEASNSNTGAS--FEGVRYGGGIEF-A 136 Query: 172 LSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 ++ S EY+ S+Y G + +G+G +F Sbjct: 137 VTGSTYISAEYQRSEYEDGIGGRDAGVVGIGFRF 170 >gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739] gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B] gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736] gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli ATCC 8739] gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101] gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89] gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 365 Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 18 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 51 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 52 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 106 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 107 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFA 164 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 165 GGVEY-AITPEIATRLEYQWTN 185 >gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895] gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895] Length = 356 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 31/215 (14%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA Y + ++ + Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQFHDVG 51 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS- 119 + + + G G F GY V G E + + Sbjct: 52 NNQIDNN-GPTHESQLGAGAFGGYQV---NPYVGFEMGYDWLGRMPYKGNTQNGAFKAQG 107 Query: 120 --LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSESL 176 L + GY ++D L +Y +G V + G + + GVE ++ + Sbjct: 108 VQLTAKLGYPITDDLDVYTRLGGMVWRADAQNNTGFKDHDTGVSPVFAGGVEY-AVTRDI 166 Query: 177 VARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 RLEY+ + + V G + +S+GV +F Sbjct: 167 ATRLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 201 >gi|170740663|ref|YP_001769318.1| porin [Methylobacterium sp. 4-46] gi|168194937|gb|ACA16884.1| porin [Methylobacterium sp. 4-46] Length = 284 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 50/193 (25%), Gaps = 56/193 (29%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALY----------------------------NGSFGEE 71 + G YAGL Y + Sbjct: 29 APPPVFAAVPVFTWTGFYAGLHTDYVFTERQRITTVGNTAFNQANVAALLRTPTTFAEVD 88 Query: 72 AHHNAGGSIFAGYNVED---SCIMYGVEGDVRYTVPVLADNI------------HSLHGI 116 N GG I GYN + + ++ GV+ DV +T Sbjct: 89 GFANVGGGI--GYNYQFTPGNGLVVGVQADVSWTAIEKNRGYLSPTVPVLVSTYKHSLNY 146 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQ----------KYETGKAGEITPIAIGGTAGVG 166 G++ R GY D ++ G G + + G G G Sbjct: 147 LGTVVGRAGYAF-DRFFVFGLGGFAFGDVTTGANFYNGGLALAYTGRTSDVQTGYAYGGG 205 Query: 167 VEVGGLSESLVAR 179 +E ++S +A+ Sbjct: 206 IEYAIPADSFLAK 218 >gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1] gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1] gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3] gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1] Length = 354 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 51/202 (25%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 40 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 41 KLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 95 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAG 164 + + + G+ L + GY ++D L +Y +G V + G+ + Sbjct: 96 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKSNFDGKNHDTGVSPVFA 153 Query: 165 VGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 154 GGVEY-AITPEIATRLEYQWTN 174 >gi|213027149|ref|ZP_03341596.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 236 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------GSFGEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + YAG ++ + G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGAKLGWSQYHDTGFIHNDGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DN + + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADT 127 Query: 146 YETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G T + G+E ++ + RLEY+ + Sbjct: 128 KSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 170 >gi|269963248|ref|ZP_06177582.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832053|gb|EEZ86178.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 185 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 16/160 (10%) Query: 51 HDFNGPYAGLSALYNGS-----FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV-RYTVP 104 D +G Y G N F + + I GY + VE Y Sbjct: 22 QDVSGFYLGGGVGNNTFSDDNPFTKVDDNGTAFKIIGGYQF---NRIVAVEAQYTNYGDF 78 Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 + D + L S+ GY + L +AT G E G Sbjct: 79 KIVDTAYDLGASNVSVAANIGYSFINGLRPFATFGLGYMSVDIPTTDNEDDLSLR---IG 135 Query: 165 VGVEVGGLS-ESLVARLEYRASKYS---KVEGFYNTISLG 200 G+E + E++ R+ Y ++ K + +G Sbjct: 136 AGLEYTPIQLENITFRVAYEMDHFTVKPKGSSLDTDVQIG 175 >gi|27377196|ref|NP_768725.1| hypothetical protein bll2085 [Bradyrhizobium japonicum USDA 110] gi|12620785|gb|AAG61061.1|AF322013_180 ID877 [Bradyrhizobium japonicum] gi|27350339|dbj|BAC47350.1| bll2085 [Bradyrhizobium japonicum USDA 110] Length = 417 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 51/159 (32%), Gaps = 23/159 (14%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRR----AHHGGRGVVPTIATNRYVPIRHDFNGP 56 M+ L +G +++AL + +A AAD A R F+ P Sbjct: 1 MRPGVLLLGATTIALVANGAANAADLEPEVKLPAAVWNWSGGYIGGHVGGGYGRTSFSNP 60 Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY------------TVP 104 Y + G GYN + + ++GVE DV + Sbjct: 61 Y-----GPSIYGGIVDTPTFLAGGQIGYNWQKNGWVFGVELDVSGAVSDGTNTCLASSGF 115 Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPD 141 V++ N + I + R GY S L Y G Sbjct: 116 VVSANCKAGPNIFATATGRVGYTFGASGGTLAYLKGGAA 154 >gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3] gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3] Length = 383 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 65/207 (31%), Gaps = 9/207 (4%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + SS+ A A H T N + + G Y + Sbjct: 44 IKKQALFSSVLFLLAVPAYA-QVENSTSHEFSDYSDTRQNNAHAYVGLRGGGTYFEGACS 102 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIR 123 NGS + + G ++ GY + G S +G L Sbjct: 103 SNGSECND--NTFGYGLYGGYQFISWFALEGAVTHYGTPDASYGLKNISAEVLGSELTGV 160 Query: 124 GGYEVSDSLLLYATVGPDVAQKYETGKAGEI-TPIAIGGTAGVGVEVGGLSESLVARLEY 182 Y++S+S YA VG + G T G + +GV+ +S++ R EY Sbjct: 161 FSYDLSESFDAYARVGVAYQNIEKNSTGGSELTSNEWGMLSALGVDYR-VSQNWSLRGEY 219 Query: 183 RASK-YSKVEGFY---NTISLGVGMKF 205 + E + +SLG+ F Sbjct: 220 QFIDGIGNSELMKSDMHFLSLGLTYHF 246 >gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli] Length = 354 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 134 DTKSNFDGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174 >gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74] Length = 346 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NTY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|329851300|ref|ZP_08266057.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19] gi|328840146|gb|EGF89718.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19] Length = 231 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 38/177 (21%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNG----------SFGEEA-----HHNAGGSIF 81 V +A + D +G G+ A Y FG++ G + Sbjct: 15 SVSALALAGAPAMADDLSGTRIGVHAGYLWGDLEPTSGFDDFGDDHIEGYETDAEVGGVE 74 Query: 82 AGYNVEDSCIMYGVEG------------------DVRYTVPVLADNIHSLHGIGGSLRIR 123 ++ +D ++G+ D + S R Sbjct: 75 LRHDWQDGDTVFGLYASWTGTNAEGGTTIEKTTVDSEGVNISTDHGFDTNLAWLASAGGR 134 Query: 124 GGYEVSDSLLLYATVGPDVAQKYE----TGKAGEITPIAIGGTAGVGVEVGGLSESL 176 G ++ + L+YA VG + G + + A G AGVG++ +++ Sbjct: 135 VGTVINGNTLIYAQVGAASGRLKITETGDGAGAKRSVTAYGYAAGVGIDYQ-ITDRW 190 >gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3] Length = 354 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174 >gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076] gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045] gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042] gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115] gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588] gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein precursor [Escherichia coli O55:H7 str. CB9615] gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088] gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1] gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1] gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1] gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1] gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1] gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076] gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045] gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042] gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115] gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588] gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein precursor [Escherichia coli O55:H7 str. CB9615] gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088] gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1] gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1] gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1] gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1] gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1] gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83] gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3] gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str. 1125] Length = 354 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 133 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174 >gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536] gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206] gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536] gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82] gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206] Length = 346 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNFDGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37] gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37] Length = 331 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 20/139 (14%) Query: 66 GSFGEEAHHNAGGSIFAGYNVE-----DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + + ++ G IF GYN + ++ Y E V I L Sbjct: 48 WTPDNQDQNDLAGGIFLGYNYKPWLAVETGYTYLGEAQFGNNRSVEQQGID--------L 99 Query: 121 RIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178 + ++ +DSL ++A G A + T G GVE ++++ A Sbjct: 100 VGKFTWQATDSLDVFAKAGGFYYFADGKGEFNTSHDRGLIP--TTGAGVEY-FFNKNVSA 156 Query: 179 RLEYRASKYSKVEGFYNTI 197 RLEY+ Y ++ + + Sbjct: 157 RLEYQY--YHDIDLKDSGV 173 >gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197] gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197] Length = 350 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 31/166 (18%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVA 143 G E + Y + + + G+ L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 144 QKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 126 DTKANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1] gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1] Length = 354 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174 >gi|7188822|gb|AAF37889.1|AF234271_1 outer membrane protein A [Shigella flexneri] Length = 246 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG--PDVAQK 145 G E + Y P DNI+ + G L + GY ++D L +Y +G A Sbjct: 70 VGFE--MGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADT 127 Query: 146 YETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G + + GVE ++ + RLEY+ + Sbjct: 128 KANVPGGASFKDHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 170 >gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143] gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299] gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143] gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299] Length = 346 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNFDGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|27379465|ref|NP_770994.1| hypothetical protein bll4354 [Bradyrhizobium japonicum USDA 110] gi|27352617|dbj|BAC49619.1| bll4354 [Bradyrhizobium japonicum USDA 110] Length = 279 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 72/233 (30%), Gaps = 52/233 (22%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ LA+ + S AAD R P + P+ ++ G Y Sbjct: 20 MKKILLALTAVAAMTGSAS---AADLAAR---------PYVKAPMAAPVA-NWTGFYIFG 66 Query: 61 SALYNGSFGEEAHHNAG-----------------GSIFAGYNVE-DSCIMYGVEGD---- 98 S +++ + G++ GY+ + + GV D Sbjct: 67 GGGGGLSNADQSVVDTVTGTPLTITQRQGGSGWFGTVGLGYDWQFSGTWVAGVFADGQFG 126 Query: 99 -VRYTVPVLADNIHSLHGIGGSLRI--RGGYEVSDSLLLYATVGPDVAQ---------KY 146 +R T+ I + S R G+ V+ ++L Y G A Sbjct: 127 SIRATIQDPIFGITGNQKLEDSWAAGVRLGWLVAPNVLSYVNGGYSGAHFGQTNFTDLAG 186 Query: 147 ETGKAGEITPIAIGGTAGVGVE-----VGGLSESLVARLEYRASKYSKVEGFY 194 A + G G GVE G S + EYR++ Y+ Sbjct: 187 VPVGAHLASYNRNGWFIGGGVENSLNIFGITSPGWFMKTEYRSAFYNAKTQTE 239 >gi|238752400|ref|ZP_04613878.1| Opacity protein and surface antigens-like protein [Yersinia rohdei ATCC 43380] gi|238709441|gb|EEQ01681.1| Opacity protein and surface antigens-like protein [Yersinia rohdei ATCC 43380] Length = 227 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 25/149 (16%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119 GEE H+ GS+ AGY + + EG+ Y ++ S Sbjct: 58 GEEKHNFYNGSLAAGYQFGNG---WRTEGE--YVFKKKSEYTSGSSIFATSYNHHKVDVQ 112 Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169 L + Y + + +Y T+G +A+ +G G E T + + G GV Sbjct: 113 RLMLNVYRDYALGYDISIYGTLGLGLAKVESSGWQGNTSRQYTENTQTNLAYSVGAGVSY 172 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTIS 198 + +L L YR VE YN + Sbjct: 173 -AVMNNLSIDLGYRYVDMGNVESGYNNFT 200 >gi|146343090|ref|YP_001208138.1| hypothetical protein BRADO6285 [Bradyrhizobium sp. ORS278] gi|146195896|emb|CAL79923.1| Putative outer membrane protein [Bradyrhizobium sp. ORS278] Length = 267 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 16/93 (17%) Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------------EITP 156 L R GY V D L YA G A + G E Sbjct: 137 KIKTDFITDLTARAGYAV-DHWLFYAKGGVAWASTKYSVTGGFTNAGANPAIAFDFEGLS 195 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + G TAG GVE + AR EY + Sbjct: 196 VRTGWTAGAGVEWAFAQD-WSARFEYDYYDFGT 227 >gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii] Length = 346 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2] Length = 354 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 24 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 77 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 78 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 133 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 134 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 174 >gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88] gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218] gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88] gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034] gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli H252] gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli H263] Length = 346 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933] gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai] gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. MG1655] gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046] gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. W3110] gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS] gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. DH10B] gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94] gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638] gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11] gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989] gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952] gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606] gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359] gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009] gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368] gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128] gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000] gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966] gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli W] gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70] gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II*; Flags: Precursor gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II*; Flags: Precursor gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str. EDL933] gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli] gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12 substr. W3110] gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. MG1655] gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai] gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei] gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046] gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS] gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12 substr. DH10B] gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94] gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638] gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli] gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli] gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli] gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli] gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli] gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11] gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989] gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952] gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)] gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str. REL606] gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)] gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7 str. TW14359] gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368] gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009] gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128] gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli DH1] gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein [Escherichia coli W] gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70] gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W] gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein precursor [Escherichia coli DH1] gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687] gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905] gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61] gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14] gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010] gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68] gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180] gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357] gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11] gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli E1520] gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli E482] gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli H120] gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli H489] gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli TA007] gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli E1167] Length = 346 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|197116786|ref|YP_002137213.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] gi|197086146|gb|ACH37417.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem] Length = 459 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 34/207 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K V V +L L F + A V PY Sbjct: 1 MKKYLQLVLVPALLLGLFTQSYA----------------------EVKPESFSVSPYV-- 36 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLHGIGG 118 A Y+ E + GYN +G+E + Y T I + + Sbjct: 37 -AGYSFFGRERLETGPAVGLRGGYNFTSH---FGMEAVLTYISTEGKDGSGIGDVDALNY 92 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178 L + + ++L+ Y +G + GE+ A G GV+ L++++ Sbjct: 93 HLDMLYHFMPENTLVPYLAMGY-GGHWRDYEGDGEVNRSAFNY--GGGVKY-FLTDAMAL 148 Query: 179 RLEYRASKYSKVEGFYNTISLGVGMKF 205 R + R + ++ + G+G+ F Sbjct: 149 RGDVRHIIMKDRDETFHDLEYGLGVDF 175 >gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69] gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6 str. E2348/69] Length = 346 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407] Length = 346 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQATPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431] Length = 346 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y +A+ + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVANGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026] gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412] gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302] gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli] gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026] gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412] gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302] Length = 346 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str. EC1212] gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B] gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G] Length = 337 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 7 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 60 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 61 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 116 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 117 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 157 >gi|119470321|ref|ZP_01613080.1| putative TonB-dependent receptor protein with OmpA-like transmembrane domain [Alteromonadales bacterium TW-7] gi|119446493|gb|EAW27768.1| putative TonB-dependent receptor protein with OmpA-like transmembrane domain [Alteromonadales bacterium TW-7] Length = 187 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 13/138 (9%) Query: 57 YAGLSALYNGSFGEEAHHNAG----GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112 Y G+ E++ ++ + GY VE + Y +I S Sbjct: 32 YTGIGYGQYSFEFEDSENDTDFDDDAQMLKGYVGTQFNEYLSVE--LAYQNFDEVSDIDS 89 Query: 113 LHGIGG-SLRIRGGYEVSDSLLLYATVGPDV--AQKYETGKAGEITPIAIGGTA--GVGV 167 I G SL R G +++S +YA G A + G ++ GG A G G+ Sbjct: 90 KAEIDGVSLAARLGIPLTESFSVYAKGGWLEWDADIKQELPVGSVSTSQDGGDAFYGAGL 149 Query: 168 EVGGLSESLVARLEY-RA 184 E S ++ RLEY R Sbjct: 150 EF-AFSSNVQMRLEYERY 166 >gi|310816635|ref|YP_003964599.1| heme receptor [Ketogulonicigenium vulgare Y25] gi|308755370|gb|ADO43299.1| heme receptor [Ketogulonicigenium vulgare Y25] Length = 1183 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 56/200 (28%), Gaps = 60/200 (30%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSI--------------------FAGYNVEDSC 90 D+ G +AGL +N + + + GS GYN + + Sbjct: 900 RDWAGWHAGLFTGFNSTENDTSFTALDGSTNSITANEGFVADFNGALVGGQVGYNWQFAN 959 Query: 91 -IMYGVEGDVRYTV-----------------PVLADNIHSLHGIGGSLRIRGGYEVSDSL 132 ++ GV+G+ LA H +L +R GY S+ Sbjct: 960 GLILGVQGEFSRPDQRADIEILSNEGTLAGTANLAAGYHQQIDWNAALNLRAGYAFSNDF 1019 Query: 133 LLYATVGPDV---------------------AQKYETGKAGEITPIAIGGTAGVGVEVGG 171 +Y G EI G G G E Sbjct: 1020 NMYGLAGVARQEETWFRDSYTADYASRYMPNGNGTTFAGLEEIDVSRNGINIGFGAEY-A 1078 Query: 172 LSESLVARLEYRASKYSKVE 191 L+++ ++ + + K E Sbjct: 1079 LNDNWSIWGQFNRTFFRKTE 1098 >gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Gallinarum] Length = 319 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 22/159 (13%) Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG 118 + + G + G F GY V G E + Y P DNI+ + G Sbjct: 18 GFIHNDGPTDENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGDNINGAYKAQG 72 Query: 119 -SLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGL 172 L + GY ++D L +Y +G A G + + G+E + Sbjct: 73 VQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGPSTKDHDTGVSPVFAGGIEY-AI 131 Query: 173 SESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 + + RLEY+ + + + + +S+GV +F Sbjct: 132 TPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRF 170 >gi|54302322|ref|YP_132315.1| outer membrane protein OmpA [Photobacterium profundum SS9] gi|46915744|emb|CAG22515.1| hypothetical outer membrane protein OmpA [Photobacterium profundum SS9] Length = 324 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 11/148 (7%) Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGI 116 Y+GLS + + + GG F GYN+ + G + D G+ Sbjct: 37 YSGLSI--DSRSSDIDKEDWGGGAFLGYNIVPWFAVEGGYTYLGEMDFKADDASIEQQGL 94 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG--GTAGVGVEVGGLSE 174 L + + V++S+ L+A G Y T +G I+ G GTAGVG E ++ Sbjct: 95 D--LVGKFTWNVTNSIDLFAKAG---GFYYFTDGSGAISGSDDGIIGTAGVGAEY-FFNK 148 Query: 175 SLVARLEYR-ASKYSKVEGFYNTISLGV 201 +L ARLEY+ + + ++T G+ Sbjct: 149 NLSARLEYQYYNDLELKDASWDTHFYGI 176 >gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] Length = 352 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 16/135 (11%) Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119 + Y + +F GYNV + +EG YT + + H G Sbjct: 47 ANGTYGSGAEGVDRDDFAAGVFMGYNVTP---WFAIEG--GYTWLGEVTSKYDEHHDSGK 101 Query: 120 LR-------IRGGYEVSDSLLLYATVG--PDVAQKYETGK-AGEITPIAIGGTAGVGVEV 169 + + Y+ +D + LY VG + ++ TAG+G E Sbjct: 102 IEQQAIDLVGKFTYQATDKVDLYTKVGGAWQFTRAKGLPGQTATDRDDSLIATAGLGAEY 161 Query: 170 GGLSESLVARLEYRA 184 +++L AR EY+ Sbjct: 162 H-FTDNLSARAEYQY 175 >gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a] gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a] Length = 346 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein [Pantoea sp. aB] gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein [Pantoea sp. aB] Length = 356 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 68/220 (30%), Gaps = 40/220 (18%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57 + ++ALA F + AQAA Y + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQYHDTGYY 45 Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 Y + G G F GY + G E + + + Sbjct: 46 ---GHGYENNDGPTHESQLGAGAFVGY---QANPYLGFEMGYDWLGRMPNKGNVTNGAFK 99 Query: 118 G---SLRIRGGYEVSDSLLLYATVG-----PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 L + Y ++D L +Y +G D Q +T + A VGVE Sbjct: 100 AQGVQLAAKLSYPINDDLDVYTRLGGMVWRADATQTNQTTGRISDHDTGVSPLAAVGVEY 159 Query: 170 GGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 L+++ RL+Y+ V + L VG+ + Sbjct: 160 -ALTQNWATRLDYQWVNNIGDAQTVGARPDNGMLSVGVSY 198 >gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum 3TCK] gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum 3TCK] Length = 327 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 17/152 (11%) Query: 53 FNGPYAGLSALYNGSFG----EEAHHNAGGSIFAGYNVEDSCIM--YGVEGDVRYTVPVL 106 + G G + Y+ G + + GG +F GYN I+ + VEG Y Sbjct: 27 YAGARVGGT-SYSDFSGLGPAQIDKEDWGGGVFLGYN-----IVPWFAVEGGYTYLGEAD 80 Query: 107 ADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 ++ G L + + V++S+ L+A G +G IG TAGV Sbjct: 81 IKGTNTSIEQQGIDLVGKFTWNVTNSIDLFAKAGGFYYFADSSGPIDVSDDGIIG-TAGV 139 Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFYNTI 197 G E +++L ARLEY+ Y VE + I Sbjct: 140 GAEY-FFNKNLSARLEYQY--YHDVELKDSGI 168 >gi|46203688|ref|ZP_00051145.2| COG0124: Histidyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 284 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 49/194 (25%), Gaps = 57/194 (29%) Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYNGS-----FGEEAHHNAGGSIFA----------- 82 + P + G YAGL Y + G++ A Sbjct: 27 EAPPIAFAPVPVFTWTGFYAGLHTGYAFTDNQNIRTSGNDLFTAGNVTAGRRPASLKSEV 86 Query: 83 ----------GYNVED---SCIMYGVEGDVRYTVPVLADNIHS--------------LHG 115 GYNV+ S + GV DV + + Sbjct: 87 DGFSKIGGGFGYNVQFTPGSGFVAGVALDVTWLDLDKHTGFYGTPNPVVGNASVYTQNID 146 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVA------------QKYETGKAGEITPIAIGGTA 163 G++ + GY D L+Y T G G G Sbjct: 147 FLGTVNGKLGYAF-DRFLVYGTGGLAFGYVGYGADFYNPNATVLQYTGGARKIFETGYNY 205 Query: 164 GVGVEVGGLSESLV 177 G G+E ++S + Sbjct: 206 GGGIEYAIPADSFL 219 >gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli] Length = 346 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVKNGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|84386140|ref|ZP_00989169.1| hypothetical protein V12B01_18141 [Vibrio splendidus 12B01] gi|84378910|gb|EAP95764.1| hypothetical protein V12B01_18141 [Vibrio splendidus 12B01] Length = 198 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 43/132 (32%), Gaps = 12/132 (9%) Query: 55 GPYAGLSAL-YNGSFGEEA----HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109 G Y G Y GS + A G +++ GY + GVE + Y N Sbjct: 33 GAYVGGGLSAYQGSDADGAPNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKN 87 Query: 110 IHSLHG-IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 S+ GY +++ + G AG G GVGVE Sbjct: 88 STDKLSPTSISVSANVGYTFDNTIRPFVLAGLSSVDLNANSGAGYNDDSGTGFHFGVGVE 147 Query: 169 VGGLSESLVARL 180 + E L RL Sbjct: 148 YTPV-EHLTLRL 158 >gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75] gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75] Length = 346 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVKNGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469] gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC 35469] Length = 375 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 62/232 (26%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 57 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAI 159 + + + G+ L + GY ++D L +Y +G A TG++ + + Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDTGV 169 Query: 160 GGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 GVE ++ + RLEY+ + + + + +SLGV +F Sbjct: 170 SPVFAGGVE-WAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRF 220 >gi|332704398|ref|ZP_08424486.1| OmpA domain protein transmembrane region-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332554547|gb|EGJ51591.1| OmpA domain protein transmembrane region-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 219 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 33/172 (19%) Query: 53 FNGPYAGLSAL---------YNGSFG-----EEAHHNAGGSIFAGYN----------VED 88 F+G Y G A Y+ G E + GY E Sbjct: 24 FDGFYIGAKAGLESYDVDVEYDLGGGGSLDDEADDSGFVAGAYLGYGRTIKNVFYLGWET 83 Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 + +G++G+ Y +++ +G ++ R G ++D L Y VG +A Sbjct: 84 DAMYHGMDGEFDYYQGHYYESLDMNWSLG--VKARLGGVIADRHLAYGLVGLRIAGFDYR 141 Query: 149 GKAG------EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 G E P+ G T G G E +++ L+AR E + Y+ E Y Sbjct: 142 NDTGYAVDDEEENPVLPGFTVGGGYEF-AITKHLIARAEIAYTAYAAYELEY 192 >gi|183598197|ref|ZP_02959690.1| hypothetical protein PROSTU_01579 [Providencia stuartii ATCC 25827] gi|188020364|gb|EDU58404.1| hypothetical protein PROSTU_01579 [Providencia stuartii ATCC 25827] Length = 228 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 25/155 (16%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL-------- 120 G++ S+ AGY + + EG+ Y+ A+ S Sbjct: 59 GDDKDDFYNASLAAGYQYGNG---WRTEGE--YSFNKKAEYTSGSTAFSTSFNHHKTESQ 113 Query: 121 RIRGG----YEVSDSLLLYATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEV 169 R+ Y++ + +Y TVG VA+ +G + G T + + G GV Sbjct: 114 RLMLNVYRDYDIYQGISVYGTVGLGVAKVKSSGWQGNAARQYGSNTDTNLAYSIGAGVSY 173 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204 + + L L YR K+E N + G++ Sbjct: 174 EPI-DKLNFDLGYRYIDLGKIESGMNRFANARGIQ 207 >gi|118578882|ref|YP_900132.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM 2379] gi|118501592|gb|ABK98074.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379] Length = 417 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 10/150 (6%) Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 G+ I AGYN + G+E Y+ N L + Sbjct: 38 GGITFGGGQHLETAPVYGIRAGYNFTKA---LGIEALFDYSNTEPTSNGSKLTNGKNTDY 94 Query: 122 IRGGYEV------SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSES 175 R G E+ + + Y G AGE + + G G+G + L++ Sbjct: 95 YRMGGELLYHFFPDNKFVPYFAAGYAAHTFKGAVPAGESSDVKGVGDYGLGAKY-FLNDK 153 Query: 176 LVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + R + R Y + + + +G+ F Sbjct: 154 VALRGDVRHLIYRQASETQHAVEYTMGLHF 183 >gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida] gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida] Length = 367 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 23/160 (14%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103 Y + + + GL+ + GE ++ +F GY + + +G+ ++ Y Sbjct: 27 YAGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNN-FGLATELGYDY 85 Query: 104 PVLADNIHSLHGIGGSLRI------------RGGYEVSDSLLLYATVGPDVAQK--YETG 149 + G R + YEV +L +Y VG + + Y Sbjct: 86 FGRVRGNKTFEGENSDKRAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQ 145 Query: 150 KAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184 + + I G G+E ++ L AR+EY+ Sbjct: 146 NVAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184 >gi|90577941|ref|ZP_01233752.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] gi|90441027|gb|EAS66207.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14] Length = 347 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 52/154 (33%), Gaps = 10/154 (6%) Query: 41 IATNRYVPIRHDFNGP-YAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 AT + G Y+ Y G + +FAGYN + VE Sbjct: 21 AATVNPFYVGARLGGAHYSNFQQNYQDITGINLNKDDVAAGVFAGYNFTP---WFAVET- 76 Query: 99 VRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 YT A ++ L + + ++D ++ +G G + Sbjct: 77 -GYTWLGEAKFENNKIKQNAIDLAAKMTWNLNDQWGVFGKLGGSYMLADFHGYGIKDLDD 135 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYR-ASKYSKV 190 + GTAGVGVE L+ L RLEY+ Sbjct: 136 HLLGTAGVGVEY-KLTNHLSTRLEYQLYHDIRSK 168 >gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed At Specific Sites In The Shigella Phage Sf6 Virion As Structural Components gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed At Specific Sites In The Shigella Phage Sf6 Virion As Structural Components gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed At Specific Sites In The Shigella Phage Sf6 Virion As Structural Components Length = 346 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENKLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YE-TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 + G+ + GVE ++ + RLEY+ + Sbjct: 126 DTYSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia coli M718] gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia coli M718] Length = 375 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 68/207 (32%), Gaps = 56/207 (27%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 23 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 56 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 57 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 111 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAI 159 + + + G+ L + GY ++D L +Y +G A TG++ + + Sbjct: 112 VENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKNHDTGV 169 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASK 186 GVE ++ + RLEY+ + Sbjct: 170 SPVFAGGVE-WAITPEIATRLEYQWTN 195 >gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218] Length = 332 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 51/174 (29%), Gaps = 21/174 (12%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYG 94 ++ + V Y G + GYN D Sbjct: 8 VSASLLVASSAAMADVYVGAKVGKTWLDDACNNTESCDLDGTTAGALLGYNFND---WLA 64 Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI 154 +EG Y + +L + Y +++ LY VG + + Sbjct: 65 LEGGYDYLGKFNGAGLDRDTIQAYTLAPKLSYALTEQWDLYGKVGAARVRYGDASDYS-- 122 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 GVE + +L R+EY+ S + V +T +LG+ +F Sbjct: 123 ------YLGAAGVEYAA-TRNLGVRVEYQYLSDMNNDVVRAKAHTTTLGLVYRF 169 >gi|311696345|gb|ADP99218.1| OmpA domain protein transmembrane region-containing protein [marine bacterium HP15] Length = 192 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 52/164 (31%), Gaps = 9/164 (5%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96 V + D +GPY S Y GE N GY + +E Sbjct: 18 VTAPVALAQSNVERDQSGPYVSGSYGGYKSHGGEFEDENDLLGAAVGYQF---NPFFALE 74 Query: 97 GDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 + D++ G G S R ++DS +Y G + T Sbjct: 75 AEYIDFGNFGEDDVEGKLKGFGLSAVGRL--PLTDSFGVYGKAGAFASAFDVDAFNESET 132 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSKVEGFYNTIS 198 + G GV+ ++ +L A EY R + E F ++ Sbjct: 133 YDEVSPFVGAGVDFR-VTPALTAFAEYNRYNVDIDKEDFNGQVT 175 >gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342] gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein [Klebsiella variicola At-22] gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55] gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342] gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein [Klebsiella variicola At-22] gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55] Length = 350 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 62/187 (33%), Gaps = 31/187 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN------------GSFGEEAHHNAGGSIFAGYNVED 88 + P + + YAG ++ + G G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGWYNSSLNNNGPTHESQLGAGAFGGYQV-- 70 Query: 89 SCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVA 143 G E + Y P D ++ G L + GY ++D L +Y +G V Sbjct: 71 -NPYLGFE--MGYDWLGRMPYKGDQVNGAFKAQGVQLTAKLGYPITDDLDIYTRLGGMVW 127 Query: 144 QKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTIS 198 + + AG+ + GVE ++ + RLEY+ V + Sbjct: 128 RADSSNSIAGDNHDTGVSPVFAGGVE-WAVTRDIATRLEYQWVNNIGDAGTVGVRPDNGM 186 Query: 199 LGVGMKF 205 L VG+ + Sbjct: 187 LSVGVSY 193 >gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972] Length = 332 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 47/158 (29%), Gaps = 21/158 (13%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + GYN D +EG Y + Sbjct: 24 YVGAKVGKTWLDDACNNTESCDLDGTTAGALLGYNFND---WLALEGGYDYLGKFNGAGL 80 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 +L + Y +++ LY VG + + GVE Sbjct: 81 DRDTIQAYTLAPKLSYALTEQWDLYGKVGAARVRYGDASDYS--------YLGAAGVEYA 132 Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 + +L R+EY+ S + V +T +LG+ +F Sbjct: 133 A-TRNLGVRVEYQYLSDMNNDVVRAKAHTTTLGLVYRF 169 >gi|91785689|ref|YP_560895.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400] gi|91689643|gb|ABE32843.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400] Length = 173 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 33/173 (19%) Query: 44 NRYVPI---RHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95 + VP F GPY G N G + +H AGYN + + + G Sbjct: 22 AQSVPPLMGASQFAGPYLGFKVGVNSSNASGVISKASHTTVFPGFTAGYNFDVNRFVVGA 81 Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 E G + + G + +L Y +G G+ Sbjct: 82 EAFADLHHGSTTCK-------DGGIDAKFGMPF-NQVLPYVRIG----------FTGDDP 123 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 G+GVE + + A E+ + S +G N+ ++G+ F Sbjct: 124 DTRFHW--GLGVEY-KFARHISAVGEWT-TDTSNHDGTKRTNNSFTIGLQYHF 172 >gi|268591643|ref|ZP_06125864.1| porin, opacity type [Providencia rettgeri DSM 1131] gi|291312944|gb|EFE53397.1| porin, opacity type [Providencia rettgeri DSM 1131] Length = 228 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 51/155 (32%), Gaps = 25/155 (16%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119 G++ GS+ AGY + G + YT A+ S Sbjct: 59 GDDKDDFYNGSLAAGYQFGN-----GWRTEAEYTFNKKAEYTSGSTTFPTSLNHHKTESQ 113 Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169 L YE+ + +Y T G +A+ +G G T + + G GV Sbjct: 114 RLMLNAYRDYEIYQGVSIYGTAGVGIAKVKSSGWQGNVSRQYASNTDTNLVYSLGAGVSY 173 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204 + L L YR K+E N + G++ Sbjct: 174 EPI-NKLNFDLGYRYVDLGKIESGMNRFANARGLQ 207 >gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes] Length = 350 Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 27/185 (14%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN------------GSFGEEAHHNAGGSIFAGYNVED 88 + P + + YAG ++ + G G F GY V Sbjct: 16 ATVAQAAPKDNTW---YAGGKLGWSQFHDTGWYNSNLNNNGPTHESQLGAGAFGGYQV-- 70 Query: 89 SCIMYGVEGDVRYTVPVLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + + + L + GY ++D L +Y +G V + Sbjct: 71 -NPYLGFEMGYDWLGRMPYKGVKVNGAFSSQAVQLTAKLGYPITDDLDIYTRLGGMVWRA 129 Query: 146 YETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNTISLG 200 + AG+ + GVE ++ + RLEY+ V + L Sbjct: 130 DSSNSIAGDNHDTGVSPVFAGGVE-WAMTRDIATRLEYQWVNNIGDAGTVGVRPDNGMLS 188 Query: 201 VGMKF 205 VG+ + Sbjct: 189 VGVSY 193 >gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia fergusonii B253] gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227] Length = 359 Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 62/232 (26%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 QK+ ++ALA F + AQAA P + + Y G Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAA-----------------------PKDNTW---YTGA 40 Query: 61 SALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PV 105 ++ G + G F GY V G E + Y Sbjct: 41 KLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGS 95 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAI 159 + + + G+ L + GY ++D L +Y +G A TG++ + + Sbjct: 96 VENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDTGV 153 Query: 160 GGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 GVE ++ + RLEY+ + + + + +SLGV +F Sbjct: 154 SPVFAGGVE-WAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRF 204 >gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380] Length = 373 Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 83/250 (33%), Gaps = 67/250 (26%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ VS LALA AQAA Y + + + G+ Sbjct: 1 MKKTVIALAVSGLALA--SVAQAA---------------PQQNTAYAGAKVGWASFHEGV 43 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGGS 119 +N + +A +N+ + + + + + YGV G + + G Sbjct: 44 R-QFNDKYSNDARYNSDTTAYG---INRNSVTYGVFGGYQILNQNNFGLAAELGYDYYGR 99 Query: 120 LRIRGG-------------------YEVSDSLLLYATVGPDVAQKY--------ETGKAG 152 +R G YEV +L +Y VG V + Sbjct: 100 VRGNVGDFREFKHSAHGLNFALKPSYEVLPNLDVYGKVGVAVVRNDYKFYGAENTNEPTE 159 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-------------SKYSKVEGFY----N 195 + + G GVE L E L AR+EY+ S V+ Y + Sbjct: 160 KFHKLKASTILGAGVEYAILPE-LAARIEYQYLNKAGNFNKALVRSGTQDVDFQYAPDIH 218 Query: 196 TISLGVGMKF 205 +++ G+ +F Sbjct: 219 SVTAGLSYRF 228 >gi|315122523|ref|YP_004063012.1| hypothetical protein CKC_03875 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495925|gb|ADR52524.1| hypothetical protein CKC_03875 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 229 Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 33/219 (15%) Query: 3 KLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 ++F + SSL L F S A AA+ + Y + G Y + Sbjct: 13 RIFSKLLYSSLFLGFFSSSAMAANNSYEYY---------PPALNYQSSIPKWKGSYISVD 63 Query: 62 ALYNGSFGEEA-HHNAGGSIFA-------GYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113 G+++ S+ A G++ ++ ++YG + Y I + Sbjct: 64 MANAALVGKDSVGIIRDRSVHAALNKFTFGFDSQEGTLVYG--ASIGYENHFTNGQIVNA 121 Query: 114 HGIGG--SLRIRGGYEVSD-------SLLLYATVGP---DVAQKYETGKAGEITPIAIGG 161 SL +R G+ + + ++Y VG DV+ ++ + Sbjct: 122 AFQNSAISLMLRSGFTFDNANSSLFQNTVIYGAVGVRLRDVSSLKSVADVLKLDLTKLDQ 181 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 VG+E L+ L EYR + G Sbjct: 182 VYAVGIE-KKLASMLSMHAEYRIVDSINSAMTLSNAKTG 219 >gi|107027296|ref|YP_624807.1| porin, opacity type [Burkholderia cenocepacia AU 1054] gi|116691307|ref|YP_836840.1| porin, opacity type [Burkholderia cenocepacia HI2424] gi|105896670|gb|ABF79834.1| porin, opacity type [Burkholderia cenocepacia AU 1054] gi|116649307|gb|ABK09947.1| porin, opacity type [Burkholderia cenocepacia HI2424] Length = 236 Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 62/200 (31%), Gaps = 15/200 (7%) Query: 12 SLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEE 71 SLAL +A A AT R + + + + G + Sbjct: 10 SLALLFSGAAFADTVAPETKKQDPSDAGYYATARVIGAFDNAVNMELTSPRVTSRIGGPD 69 Query: 72 AHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL--RIRG 124 GS+ GY + ++ G+ N + H L Sbjct: 70 GQDRVTGSVAGGYQFGNGWRAEGEYVFKRSGNFVSYWAPFDANANEFHVSSQRLMLNGYR 129 Query: 125 GYEVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 +++ +Y T+G VA Q +T + T + +AG GV +++ Sbjct: 130 DFDLGRGFSVYGTLGVGVAIVSAEGWQGNDTRRFASKTQTNLAYSAGAGVSY-AINKRFT 188 Query: 178 ARLEYRASKYSKVEGFYNTI 197 + YR VE +NT Sbjct: 189 IDVGYRYVDMGNVETGFNTF 208 >gi|188582112|ref|YP_001925557.1| porin [Methylobacterium populi BJ001] gi|179345610|gb|ACB81022.1| porin [Methylobacterium populi BJ001] Length = 285 Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 50/195 (25%), Gaps = 59/195 (30%) Query: 40 TIATNRYVP-IRHDFNGPYAGLSALYN-------GSFGEEAHHNAG-------------- 77 + P + G YAGL Y + G +A Sbjct: 27 EAPPVAFTPVPVFTWTGFYAGLHTGYAFTDNPNIQTRGNDAFTATNVQLARRPASLKSEV 86 Query: 78 ------GSIFAGYNVED---SCIMYGVEGDVRY-------------TVPVLADNIHSLH- 114 G F GYN + S + G+ D + V ++++ Sbjct: 87 DGFSRIGGGF-GYNYQFTPGSGFVAGLAFDATWLDLDKRIGFYGTPNPVVGNASVYTQDL 145 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQ------------KYETGKAGEITPIAIGGT 162 G++ + GY D +Y T G G G Sbjct: 146 DFLGTVNGKLGYAF-DRFFVYGTGGLAFGHVSYGADFFNPGATVLQYTGGGRKIFETGYN 204 Query: 163 AGVGVEVGGLSESLV 177 G G+E +S + Sbjct: 205 YGGGIEYAITPDSFL 219 >gi|146340512|ref|YP_001205560.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. ORS278] gi|146193318|emb|CAL77334.1| conserved hypothetical protein; putative outer-membrane immunogenic protein precursor; putative exported protein [Bradyrhizobium sp. ORS278] Length = 259 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 58/198 (29%), Gaps = 40/198 (20%) Query: 40 TIATNRYVPIRHDFNGPYA-GLSALYNGSFGEEAHHNAG---------------GSIFAG 83 P+ + G Y G + G G++ AG Sbjct: 27 PYVKAPMAPVAPSWTGFYIFGGGGGGLWNADSNVKTVGGLAITRDQRLGGNGWFGTVGAG 86 Query: 84 YNVE-DSCIMYGVEGDVRY-------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 Y+ + + + GV D ++ T P A + IR GY V+ ++L Y Sbjct: 87 YDWQFNGSWLAGVFADGQFGDIRGSLTDPNFALEGREKLRTSYAAGIRVGYLVAPNVLSY 146 Query: 136 ATVGPDVAQ------KYETGKAGEITPI-----AIGGTAGVGVE-----VGGLSESLVAR 179 G + G G G GVE G + + Sbjct: 147 VNGGYSGSDWSGTNLSTLAAGGGATVATTPSFHRDGWFIGGGVENNLNIFGISAPGWFMK 206 Query: 180 LEYRASKYSKVEGFYNTI 197 EYR++ YS+V + Sbjct: 207 TEYRSAYYSRVTLPETAV 224 >gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685] gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685] Length = 356 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 73/228 (32%), Gaps = 56/228 (24%) Query: 2 QKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +K+ ++ALA F + AQAA P + Y G Sbjct: 5 RKMKKTAIALAVALAGFATVAQAA-----------------------PKDDTW---YVGG 38 Query: 61 SALYNGSFGE---------EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL---AD 108 ++ G + G F GY + G E + Y Sbjct: 39 KLGWSHYIGNSFENMDSTKSHPNQLGAGAFFGY---QANPYLGFE--MGYDWLGRMGYTG 93 Query: 109 NIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTA 163 +++ G L + Y + D+L +Y +G A + + A Sbjct: 94 DVNGKFKAQGIQLAAKLSYPLMDNLDVYTRLGGMVWRADAHASDATDYVSGHDTGVSPLA 153 Query: 164 GVGVEVGGLSESLVARLEYRA-SKYSKVEGF----YNT-ISLGVGMKF 205 +GVE L++ RL+Y+ +K NT +SLGV +F Sbjct: 154 AIGVEY-ALNKDWATRLDYQYVNKIGTSSQTGARPDNTLLSLGVVYRF 200 >gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing protein [Pantoea sp. At-9b] gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein [Pantoea sp. At-9b] Length = 356 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 67/221 (30%), Gaps = 43/221 (19%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57 + ++ALA F + AQAA Y + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDDTWYTGAKLGWSQYHDTGYY 45 Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSL 113 Y + G G F GY + G E + Y P I+ Sbjct: 46 ---GNGYENNNGPTHESQLGAGAFLGY---QANPYLGFE--LGYDWLGRMPNKGSEINGA 97 Query: 114 HGIGG-SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAG-EITPIAIGGTAGVGVE 168 G L + Y ++D L +Y +G + A VGVE Sbjct: 98 FKAQGVQLAAKLSYPITDDLDVYTRLGGMVWRADSTQNNNGVRISDHDTGVSPLAAVGVE 157 Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 L+++ RL+Y+ V + L VG+ + Sbjct: 158 Y-ALTKNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 197 >gi|170749946|ref|YP_001756206.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170656468|gb|ACB25523.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 245 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 58/167 (34%), Gaps = 34/167 (20%) Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHN--------------AGGSIFAGYNVED---SCIM 92 + G YAG++A Y G + G GYN + S ++ Sbjct: 40 VFTWTGFYAGVNAGYAFPTGSGGFTDPTYGTVTGGGRSGGFAGGGQVGYNYQFTPGSGVV 99 Query: 93 YGVEGDVRYTVPVLADNIHSLH----------GIGGSLRIRGGYEVSDSLLLYATVGPDV 142 GVE D++ T AD + G++R R GY D +L+Y T G Sbjct: 100 VGVETDIQGTAFAKADAAYLGTAPYYSVRPSLDYFGTVRARLGYAF-DRVLVYGTGGFAY 158 Query: 143 AQKYETGKAGEITPIA-----IGGTAGVGVEVGGLSESLVARLEYRA 184 + A G AG G+E +E L A++E Sbjct: 159 GGGARSTYAASYPYTLPSTDRTGYAAGGGIEY-AFTEKLSAKVEALY 204 >gi|254497414|ref|ZP_05110213.1| putative outer-membrane immunogenic protein precursor [Legionella drancourtii LLAP12] gi|254353370|gb|EET12106.1| putative outer-membrane immunogenic protein precursor [Legionella drancourtii LLAP12] Length = 319 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 44/179 (24%), Gaps = 45/179 (25%) Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVE-DSCIMYGVEGD---------------- 98 YA + + A+ G G+N S + G E D Sbjct: 97 AYATAAVTGTKNKSSLANAGFIGGGQLGFNQTLQSHYVVGFEADIQGISESNRKKWSASA 156 Query: 99 VRYTVPV-------LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-- 149 V + I G++R GY ++ + LL T G Sbjct: 157 VNFNDNNGDPQIINTNTAIVQGTDFLGTVRGHLGYLINPAFLLSGTGGFAYGGVRSQTRI 216 Query: 150 ------------------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 G +G T G G + A++EY V Sbjct: 217 IQSYGIPQNTNNLDANWRSVGYYANTRLGWTVG-GSFAWMPRPAWSAKIEYLYYNLGSV 274 >gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II; Flags: Precursor Length = 351 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 38/192 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140 G E + Y + + + G+ L + GY ++D L +Y +G Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYN 195 A TG++ + + GVE ++ + RLEY+ + + + + Sbjct: 126 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTNNIGDANTIGTRPD 184 Query: 196 T--ISLGVGMKF 205 +SLGV +F Sbjct: 185 NGLLSLGVSYRF 196 >gi|332967863|gb|EGK06959.1| hypothetical protein HMPREF0476_1953 [Kingella kingae ATCC 23330] Length = 185 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 64/166 (38%), Gaps = 13/166 (7%) Query: 50 RHDFNGPYAGLSALYNGSFG-EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPV 105 +F G G+ E + ++ ++ Y E + +++Y + + Sbjct: 23 NSNFVGAGVGIDTGVTNYTNVEGSKNSNATNLVGSYGFEFPDTPLVGQAELKYKLGSSKI 82 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 S H + G+ V++ L+ YA VG + T + G + A G T GV Sbjct: 83 DDAGTKSKHLWNANYVQ--GFRVTNDLMPYAKVGYATGKFTGTDEDGAFSVRARGITYGV 140 Query: 166 GVEVGGLSESLVARLEYRASKY------SKVEGFYNTISLGVGMKF 205 G + ++ ++ EY S S + N +++GVG +F Sbjct: 141 GAKY-AVAPNVEVGAEYVRSNLKVRDCDSDCKVKSNNVNVGVGYRF 185 >gi|315936245|gb|ADU55796.1| putative heme-binding phage-associated protein [Bartonella henselae] Length = 163 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 32/113 (28%) Query: 21 AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH------- 73 AQAAD + V +A + G Y G G+F + Sbjct: 1 AQAADVI---------VPHEVAPTVISAPAFSWTGFYIGGQV---GNFSSKVEITDPNKK 48 Query: 74 ------------HNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSL 113 G I+AG N++ ++ GVE D + A + Sbjct: 49 DKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAK 101 >gi|110835522|ref|YP_694381.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2] gi|110648633|emb|CAL18109.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2] Length = 251 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 34/146 (23%) Query: 79 SIFAGYNVE-DSCIMYGVEGDVRYTVPVLADNI-------------HSLHGIGGS--LRI 122 +F YN+ + + G E + Y +D++ + I + L I Sbjct: 78 GVFTSYNMALNDRWIVGAE--LAYQGSNTSDSVKSIPGDPLAGNQTEAEVEINQTFLLGI 135 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGK---------------AGEITPIAIGGTAGVGV 167 +GGY ++ S L Y+T+ + + + G +G+ Sbjct: 136 KGGYLLNASTLAYSTLSATLTEVEVNSDCPSDGTVCNPGSPARSDSDDDNITGWALALGL 195 Query: 168 EVGGLSESLVARLEYRASKYSKVEGF 193 E LSE+L R EYR + Sbjct: 196 EKS-LSENLSVRAEYRYADLGTANVT 220 >gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937] gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937] Length = 353 Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 33/214 (15%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++ALA F + AQAA Y + ++ + Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PNDNTWYAGAKLGWSQYHDTGLT 45 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP---VLADNIHSLHGIGG- 118 + A + G F GY V G E + Y G Sbjct: 46 GNGYNVTNAAQNQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMKYNGGNQGSFKAQGV 100 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSESLV 177 L + Y + D L +Y +G V++ +G + A VGVE ++++ Sbjct: 101 QLSAKLSYPIVDDLDIYTRLGGFVSRTDSHDNSGLNDHDTGVSPLAAVGVEY-AITKNWA 159 Query: 178 ARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 RL+Y+ S V G + +S+GV +F Sbjct: 160 TRLDYQWVNNIGDASTVGGRPDNGLLSVGVSYRF 193 >gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617] gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II; Flags: Precursor gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae] gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617] Length = 351 Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 32/167 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140 G E + Y + + + G+ L + GY ++D L +Y +G Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 A TG++ + + GVE ++ + RLEY+ + Sbjct: 126 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTN 171 >gi|119776561|ref|YP_929301.1| outer membrane protein [Shewanella amazonensis SB2B] gi|119769061|gb|ABM01632.1| outer membrane protein, putative [Shewanella amazonensis SB2B] Length = 189 Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 7/131 (5%) Query: 54 NGPYAGLSALYNGSFGEE--AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 G Y G + + G+ + G + GYN +G+E ++ + + D + Sbjct: 25 TGFYVGGAINQVKASGDGEGSSDGVGFGAYGGYNF---NEWFGLEANLFASGDLGEDGVD 81 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G + + Y +D+ +A VG + G T GVGV Sbjct: 82 VGAG-ALTFTPKFTYHFNDTFSAFAKVGVASMAVVVDYGPFDADYTGWGLTWGVGVNA-A 139 Query: 172 LSESLVARLEY 182 L+E L RL Y Sbjct: 140 LTEKLNLRLSY 150 >gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter asiaticus str. psy62] gi|254040805|gb|ACT57601.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter asiaticus str. psy62] Length = 225 Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 57/193 (29%), Gaps = 27/193 (13%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + +S L L F SA AD G P V F G Y Sbjct: 17 IILSGLFLGFFSSAAMAD---------YGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDH 67 Query: 68 FGEEAHHNAG-GSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126 N + G + +D ++YG V I + G+L R G+ Sbjct: 68 QSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGID-GDKVAGTLLFRTGF 126 Query: 127 EVSD-------SLLLYATVGPDVAQKYETGKAGEITPI-----AIGG---TAGVGVEVGG 171 + + L+Y G + A A G GVG+E Sbjct: 127 TFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIE-KK 185 Query: 172 LSESLVARLEYRA 184 L+ L R EYR Sbjct: 186 LASMLSIRGEYRY 198 >gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1] gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1] Length = 343 Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 54/168 (32%), Gaps = 24/168 (14%) Query: 57 YAGLSALYNGSFG-------EEAHHNAGGSIFAGYN-VEDSCIMYG----VEGDVRY-TV 103 Y G + + F GY + + G E Y Sbjct: 37 YLGGKLGAMKYQNACEEWAVDCDGTDVALGGFIGYQVWQHWGLELGYLDFGEAKALYPEG 96 Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG-- 161 + S+ GI S+ R V+D+L +A G Q +G + G Sbjct: 97 GRVNQYSGSMSGIEMSVVGRI--SVTDNLDAFAKAGTLYWQGKNSGPT--RSLTDDGWAP 152 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVE----GFYNTISLGVGMKF 205 TAGVG+E S R+EY+ + + +LG+ +F Sbjct: 153 TAGVGLEYH-FSNHWAGRVEYQYVNALGSDKLGGSNGHLATLGIVYRF 199 >gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82] gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74] Length = 351 Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 32/167 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140 G E + Y + + + G+ L + GY ++D L +Y +G Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 125 Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 A TG++ + + GVE ++ + RLEY+ + Sbjct: 126 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTN 171 >gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168] gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168] Length = 351 Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 32/167 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140 G E + Y + + + G+ L + GY ++D L +Y +G Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 + TG + + + G+E ++ + RLEY+ + Sbjct: 126 DTKSHNNLTGASTKDHDTGVSPVFAGGIE-WAMTRDIATRLEYQWTN 171 >gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont] Length = 356 Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 68/220 (30%), Gaps = 40/220 (18%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57 + ++ALA F + AQAA Y + ++ G Y Sbjct: 1 MKKTAIAITVALAGFATVAQAA---------------PKDDTWYTGAKLGWSQYHDTGYY 45 Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 Y + G G F GY + G E + + + Sbjct: 46 ---GNGYENNDGPTHESQLGAGAFLGY---QANPYLGFELGYDWLGRMPNKGNVTNGAFK 99 Query: 118 G---SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEV 169 L + Y ++D L +Y +G G I+ G + A VGVE Sbjct: 100 AQGVQLAAKLSYPIADDLDVYTRLGGMVWRADSTQTNPDNGRISNHNTGVSPLAAVGVEY 159 Query: 170 GGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 L+++ RL+Y+ V + L VG+ + Sbjct: 160 -ALTKNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198 >gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 348 Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 55/172 (31%), Gaps = 19/172 (11%) Query: 38 VPTIATNRYVPIRHDFNGPYAGLSAL----------YNGSFG-EEAHHNAGGSIFAGYNV 86 +P N YAG+ Y G + +FAGYN+ Sbjct: 9 LPLALIISTAASAATMNPFYAGVRVGGAHYSNFQQNYQDVTGINLNKDDVAAGLFAGYNI 68 Query: 87 EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQK 145 + VE YT A H+ L + + ++D ++ +G Sbjct: 69 TP---WFAVET--GYTWLGEAKFQHNKIKQHAFDLTGKATWHLNDKWGVFGKLGGSYMLT 123 Query: 146 YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR-ASKYSKVEGFYNT 196 G + + GT G GVE L++ L RLEY+ + N Sbjct: 124 DFHGYGIKDIDEHLVGTVGAGVEYQ-LTDHLSTRLEYQLYHDLKSNPRYTNQ 174 >gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 325 Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 18/149 (12%) Query: 57 YAGLSALYN---------GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 Y G A + S E + N G +FAGY V + + Sbjct: 28 YVGARAGASFLTNMDDAVTSVTEIQNTNFAGGVFAGYQVTPWFALETGYTHLGNAKLDNG 87 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG--TAGV 165 + G L + + +DSL +YA G G + G TAG Sbjct: 88 QGSYEAQGAD--LVTKFSFSATDSLDIYAKAGAFYYDWNAIGSGVTNSD--NGWSPTAGA 143 Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFY 194 G+E ++++L RLEY+ Y+ V G Sbjct: 144 GLEY-FINKNLSTRLEYQY--YNDVGGPD 169 >gi|148555268|ref|YP_001262850.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1] gi|148500458|gb|ABQ68712.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1] Length = 273 Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 50/180 (27%), Gaps = 63/180 (35%) Query: 52 DFNGPYAGLSALY-----------------NGSFGEEAHHNAGGS--------------- 79 ++ G Y G Y +G+FG+ + A GS Sbjct: 29 NWTGFYVGGQLGYAWQPRDGDEQVLFDRNLDGNFGDAFPNFAPGSCGGAPTSASPATGCA 88 Query: 80 ---------IFAGYNVEDSCI---MYGVEGDVRYTVPVLAD----------NIHSLHGIG 117 + AGY+ + + G + T + + G Sbjct: 89 KDNDGTTWKVHAGYDYQFGETSGPVIGAVAEYGKTYLYDNVTAFSTTPAVYKMQAKMRSG 148 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVA---------QKYETGKAGEITPIAIGGTAGVGVE 168 G+LR RGGY L+Y T G + + A G G G+E Sbjct: 149 GALRARGGYSFDTGTLIYGTGGLAYGKIRNSFSTSNGVNSFTVDGASKDAWGYNYGGGIE 208 >gi|296157513|ref|ZP_06840348.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gi|295892285|gb|EFG72068.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 160 Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 30/173 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95 + + + F GPY G N G + +H AGYN + + G Sbjct: 9 AQSVQPLSSASQFAGPYLGFKVGVNSSNASGVISKASHTTVFPGFTAGYNFDIDRFIVGA 68 Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 E G + + G + +L Y +G G+ Sbjct: 69 EAFADLHHGSTTYK-------DGGIDAKFGMPF-NQILPYVRIG----------FTGDDP 110 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 G+G+E + + A E+ + S +G N+ ++G+ F Sbjct: 111 DTRFHW--GLGIEY-KFARHISAIGEWT-TDTSNHDGTKRTNNSFTIGLQYHF 159 >gi|148980016|ref|ZP_01815837.1| hypothetical protein VSWAT3_06776 [Vibrionales bacterium SWAT-3] gi|145961459|gb|EDK26763.1| hypothetical protein VSWAT3_06776 [Vibrionales bacterium SWAT-3] Length = 202 Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 25/170 (14%) Query: 55 GPYAGLSALYNGS-----FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV--PVLA 107 G Y G + G + G S++ GY + G+E + YT + Sbjct: 39 GSYIGAGLGVHQDSDTDGGGNLDAESMGYSLYGGYQF---NRIVGIE--LGYTDYADYES 93 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167 S+ GY +S+ + G G GVGV Sbjct: 94 YGTKVFSPTSLSVAANLGYTFDNSIRPFVLAGLSYVDLNANSSNAFDDDSGAGFRFGVGV 153 Query: 168 EVGGLSESLVARL------------EYRASKYSKVEGFYNTISLGVGMKF 205 E + ++L RL + R ++ + ++T++LG F Sbjct: 154 EYTPV-DNLTLRLISQADAVNIEFFDSRGNRLQSRDVAFSTVTLGASYNF 202 >gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905] Length = 342 Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 32/167 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 7 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFIDNNGPTHENQLGAGAFGGYQV---NPY 60 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGP----- 140 G E + Y + + + G+ L + GY ++D L +Y +G Sbjct: 61 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDVYTRLGGMVWRA 116 Query: 141 -DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 A TG++ + + GVE ++ + RLEY+ + Sbjct: 117 DTKAHNNVTGESEKNHDTGVSPVFAGGVE-WAITPEIATRLEYQWTN 162 >gi|56696999|ref|YP_167361.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3] gi|56678736|gb|AAV95402.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3] Length = 178 Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 5/107 (4%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG--SIFAGYNVEDSC-IMYGVE 96 ++ + D++G Y GL Y + G A GYN + + G E Sbjct: 16 AVSMAAAPAMAGDWSGAYLGLGVGYGDADGPGARDGEAASFGGHIGYNFDLGNRFVMGGE 75 Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 + L +L I G L+++ GY+ +L Y +G A Sbjct: 76 LEYDRVNNDLGAGGGTLDEI-GRLKVKAGYDF-GPVLGYGVLGAARA 120 >gi|145298279|ref|YP_001141120.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851051|gb|ABO89372.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 352 Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 26/162 (16%) Query: 49 IRHDFNGPYAGLSALY-----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRY- 101 +D+ Y G + G FG++A +A ++F GYN ++ G E + Y Sbjct: 23 PVNDW---YVGAGGGWAIAHDLGDFGKDASKDATALTLFGGYNFTEN---LGAE--LGYL 74 Query: 102 ---TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158 V + S G S+ R + D ++A G + + Sbjct: 75 STGDWDVQGTD-FSSQGATLSVIGRL--PLGDIFSVFAEGGGYLYHVKSINGGDDNLAPL 131 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 AG+G+ L + + + YR + + + G Sbjct: 132 ----AGLGL-TAKLHDWVDIQARYRYLVRVGDDSDNDKVGSG 168 >gi|149185443|ref|ZP_01863759.1| outer membrane protein-like protein [Erythrobacter sp. SD-21] gi|148830663|gb|EDL49098.1| outer membrane protein-like protein [Erythrobacter sp. SD-21] Length = 200 Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 24/174 (13%) Query: 55 GPYAGLSALYNG-------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 G Y G Y G + +A I AGY++ G+EG++ + + Sbjct: 28 GLYVGAIGGYEGVDVESADGTATASADSAVYGINAGYDLSLGGAFVGIEGELSTSNGDTS 87 Query: 108 -----DNIHSLHGIGGS--LRIRGGYEVSDSLLLYATVGPDVAQK---YETGKAGEITPI 157 GG + R G+ ++ + Y VG +G G++ Sbjct: 88 FPDSFGGAREGLETGGQYYIGARAGFALTPGIAAYGKVGYTALDTTAFTSSGSLGDLKEN 147 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKV------EGFYNTISLGVGMKF 205 A G G G++V L L ARLEYR SKY+ + + + + G+ ++F Sbjct: 148 ADGLRYGAGLQV-ALPGPLEARLEYRRSKYNDLADVDQGDAMTDQVVAGLAVRF 200 >gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 372 Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 38/187 (20%) Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111 YAG A + + + H GG Y + + + YGV G + Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85 Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145 + G +R + YEV +L +Y VG + + Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145 Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198 Y + + I G G+E ++ L AR+EY+ ++ V+ T+S Sbjct: 146 YVQQHVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204 Query: 199 LGVGMKF 205 + G F Sbjct: 205 IPTGTNF 211 >gi|312885261|ref|ZP_07744938.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC BAA-2122] gi|309367068|gb|EFP94643.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC BAA-2122] Length = 323 Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 24/162 (14%) Query: 54 NGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNV-EDSCIMYGVEGDVRYTVPVL 106 Y G + + ++ +AGY + I G+E Y Sbjct: 20 ANVYVGGKVGKSWMDDACVAGQPCDDEDSTYGAYAGYEFNQKIAIEGGIERLGNYDKSAF 79 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 N+ + +L + V+ + LY VG + G+ +G G Sbjct: 80 NGNVQAF-----TLAPKFSLPVTPDIALYGKVGGAYTK-----FDGKDDYSYLG---AAG 126 Query: 167 VEVGGLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 VE +S ++ AR EY+A + + + N+ ++G+ KF Sbjct: 127 VEFN-ISSNVTARAEYQALTDINNDVTKAMGNSATIGISYKF 167 >gi|119385191|ref|YP_916247.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222] gi|119374958|gb|ABL70551.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222] Length = 239 Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 73/245 (29%), Gaps = 49/245 (20%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 +F ++ +S+ L + A P + P + G Y G + Sbjct: 1 MFKSIAISTSVLLAAVPAFGG-----GFTIPVVETPVVMPQEVAPAIGSWEGLYLGGALG 55 Query: 64 YNGSFGEEAHHNAGGS-----------------IFAGYNVEDS----CIMYGVEG--DVR 100 + + G + GY + I+ G E + Sbjct: 56 SAFGSDDRVGISQPGGGAAYTPGSVDIRGATFSLQMGYRWQREVRGRQIVTGPELAYEAG 115 Query: 101 YTVPVLAD-NIHSLHGIGG--SLRIRGGY-EVSDSLLLYATVGPD-VAQKYETGKAG--- 152 + + + G SLR + G ++ LL Y +VG + Y AG Sbjct: 116 GADDSFSRAGESASSELNGLLSLRWKTGVLNEAEDLLFYGSVGIAHGSFDYTVTGAGMRY 175 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------------NTISLG 200 + T G+GVE L+E E+ ++ K ++I +G Sbjct: 176 DGDFTDSALTVGLGVE-KRLNERASLFGEWEFRQFGKTTLTDAAGYTTRATPEHHSIRVG 234 Query: 201 VGMKF 205 V F Sbjct: 235 VNFAF 239 >gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 372 Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 63/187 (33%), Gaps = 38/187 (20%) Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111 YAG A + + + H GG Y + + + YGV G + Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85 Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145 + G +R + YEV +L +Y VG + + Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145 Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198 Y + + + I G G+E ++ L AR+EY+ ++ V+ T+S Sbjct: 146 YVQQRVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204 Query: 199 LGVGMKF 205 + G F Sbjct: 205 IPTGTNF 211 >gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 372 Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 38/187 (20%) Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111 YAG A + + + H GG Y + + + YGV G + Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85 Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145 + G +R + YEV +L +Y VG + + Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145 Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198 Y + + I G G+E ++ L AR+EY+ ++ V+ T+S Sbjct: 146 YVQQHVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204 Query: 199 LGVGMKF 205 + G F Sbjct: 205 IPTGTNF 211 >gi|84684753|ref|ZP_01012653.1| hypothetical protein 1099457000245_RB2654_02554 [Maritimibacter alkaliphilus HTCC2654] gi|84667088|gb|EAQ13558.1| hypothetical protein RB2654_02554 [Rhodobacterales bacterium HTCC2654] Length = 167 Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIH 111 F+G Y G F + A + +AGYN + G E +V+Y + Sbjct: 30 FDGFYLGAFI--QNDFAKAAGLDGAVGAWAGYNYGFGNGFILGAEAEVQYDWA--TSQVP 85 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDV-AQKYETGKAGEITPIAIGG 161 + G + R GY + ++YA G + G A+GG Sbjct: 86 AGSAFTGLVNARAGYATASDFMIYAKGGAGFMSGAGFIYDFGAGAEYALGG 136 >gi|170750246|ref|YP_001756506.1| porin [Methylobacterium radiotolerans JCM 2831] gi|170656768|gb|ACB25823.1| porin [Methylobacterium radiotolerans JCM 2831] Length = 287 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 51/209 (24%), Gaps = 73/209 (34%) Query: 53 FNGPYAGLSALYNGS--------------------------FGEEAHHNAGGSIFAGYNV 86 + G YAGL + Y + A AGYN Sbjct: 42 WTGFYAGLESAYTFTDRERITTVGVQPGNATNVALGRRPFATSTTQDGFANIGGTAGYNY 101 Query: 87 ED---SCIMYGVEGDVRYTVPVLADNIHS----------------LHGIGGSLRIRGGYE 127 + + I+ G+ + +T + G+L R GY Sbjct: 102 QFTPGAGIVVGIANSIDWTDITKNRVVLGTGNVAGGPPNISQFRQSLDWLGTLTGRVGYA 161 Query: 128 VSDSLLLYATVGPDVAQKYETG----------KAGEITPIAIGGTAGVGVEVGGLSES-- 175 D +L+Y G + AG G G G+E ++S Sbjct: 162 F-DRVLVYGMGGLAYGNVFHDANFYTPGGRLQFAGRYDDFKTGFAYGGGIEFALPTDSFL 220 Query: 176 ---------------LVARLEYRASKYSK 189 + + EY Sbjct: 221 NTFALGRYIGIKYDAITVKAEYLHYDLGS 249 >gi|77360562|ref|YP_340137.1| TonB-dependent receptor protein [Pseudoalteromonas haloplanktis TAC125] gi|76875473|emb|CAI86694.1| putative TonB-dependent receptor protein with OmpA-like transmembrane domain [Pseudoalteromonas haloplanktis TAC125] Length = 189 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%) Query: 98 DVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKY--ETGKAGEI 154 ++ Y ++ S I G SL R GY +++S +YA G + G + Sbjct: 77 ELAYQNFDEVSDVDSKAEIDGVSLAARLGYPITESFSVYAKGGWLEWDAEYTQDLPVGSV 136 Query: 155 TPIAIGGTA--GVGVEVGGLSESLVARLEY-RA 184 + GG A G G+E L+ ++ RLEY R Sbjct: 137 SASTDGGDAFYGAGIEY-ALTTNVQFRLEYERY 168 >gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661] gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661] Length = 357 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 67/221 (30%), Gaps = 41/221 (18%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57 + ++ALA F + AQAA Y + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDNTWYTGAKLGWSQYHDTGYY 45 Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 Y + G G F GY + G E + + + Sbjct: 46 ---GNGYANNDGPTHESQLGAGAFGGY---QANQYLGFELGYDWLGRMPNKGNVTNGAFK 99 Query: 118 G---SLRIRGGYEVSDSLLLYATVGP------DVAQKYETGKAGEITPIAIGGTAGVGVE 168 L + Y ++D L +Y +G Q TG + A VGVE Sbjct: 100 AQGVQLAAKLSYPITDDLDVYTRLGGMVWRADSTQQNTITGNRQSDHDTGVSPLAAVGVE 159 Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 L+++ RL+Y+ V + L +G+ + Sbjct: 160 Y-ALTQNWATRLDYQWVNNIGDAQTVGARPDNGMLALGVSY 199 >gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 374 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 29/183 (15%) Query: 46 YVPIRHDFNGPYAGLSA---LYNGSFGEEAHHNAGG---SIFAGYNVEDSCIMYGVEGDV 99 Y + + + GL+ Y+ G N +F GY + + +G+ ++ Sbjct: 27 YAGAKAGWASFHDGLTQFDNTYDYGSGINLGINRNSVTYGVFGGYQILNQNN-FGLATEL 85 Query: 100 RYTV-------PVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQK-- 145 Y + + S + YEV +L +Y VG + + Sbjct: 86 GYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145 Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 Y + + I + G G+E ++ L AR+EY+ ++V + Sbjct: 146 YVQQHVDKDSRIKVHNLKPSLLLGAGLEY-AITPELAARVEYQY--LNRVGNLDKAVRTT 202 Query: 201 VGM 203 VG Sbjct: 203 VGY 205 >gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 367 Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 21/159 (13%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYN-VEDSCIMYGVEGDVRYT 102 YV + + + GL+ + GE ++ +F GY + + E Y Sbjct: 27 YVGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNNFGLATELGYDYF 86 Query: 103 VPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGK 150 V + + G L ++ YEV +L +Y VG + + Y Sbjct: 87 GRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQN 146 Query: 151 AGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184 + + I G G+E ++ L AR+EY+ Sbjct: 147 VAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184 >gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14] Length = 351 Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 27/170 (15%) Query: 56 PYAGLSALYNGSFGEEAH------HNAGGSIFAGYNVEDSCIMYGVEGDV-RY---TVPV 105 YAG + G S+F+G+ Y +EG + Y + Sbjct: 42 FYAGQKLGWARYSNNCDDKVNCKIDTFGYSVFSGFQF---NRWYALEGSISNYGSPDYKI 98 Query: 106 LADNIHSLHG-IGGSL--RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGT 162 +D I S GG + + R +++ L YA +G +Y + G Sbjct: 99 NSDFIESNTSIWGGEILSKFRV-LDITSHLHAYAKLGL--GYQYLNQPSSYTNKSHYFGL 155 Query: 163 AGV-GVEVGGLSESLVARLEYRASKYSKVEGFYNTIS------LGVGMKF 205 G G+E +++ R E + + + E +N +G+ KF Sbjct: 156 LGAAGLEYD-ITDQWSLRAEVQHIDFKEKEDNFNQGKDVTFSSIGLSYKF 204 >gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM 30120] gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM 30120] Length = 357 Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 38/187 (20%) Query: 48 PIRHDFNGPYAGLSALYNGS------------------FGEEAHHNAGGSIFAGYNVEDS 89 P + + Y G ++ G++ G ++AGY Sbjct: 23 PKDNTW---YTGGKLGWSHYEHAKFTFEDAAGDETSVGTGKKTRDQLGAGLYAGYQYNQ- 78 Query: 90 CIMYGVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y DN S+ +G SL + Y V + L +Y +G V + Sbjct: 79 --YMGFE--MGYDWFGKMKYKGDNAGSVSSMGVSLTTKLSYPVMEDLDVYTRLGGMVYRT 134 Query: 146 YET-GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYNT-----IS 198 G+ T + +G+E ++ L RL+Y+ S+ + + +S Sbjct: 135 EAKVNGVGKETDTGVSPVYALGLEY-AITPELATRLDYQWVSRMGDKDNIGVSPDNGMLS 193 Query: 199 LGVGMKF 205 +G+ +F Sbjct: 194 VGLAYRF 200 >gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1] gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1] Length = 356 Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 66/220 (30%), Gaps = 40/220 (18%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPY 57 + ++ALA F + AQAA Y + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAA---------------PKDDTWYTGAKLGWSQYHDTGYY 45 Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 Y + G G F GY + G E + + + Sbjct: 46 ---GNGYENNNGPTHESQLGAGAFVGY---QANPYLGFELGYDWLGRMPNKGTVTNGAFK 99 Query: 118 G---SLRIRGGYEVSDSLLLYATVG-----PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 L + Y + D L +Y +G D Q T + A VGVE Sbjct: 100 AQGVQLAAKLSYPIYDDLDVYTRLGGMVWRADATQTNPTTGRISDHDTGVSPLAAVGVEY 159 Query: 170 GGLSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 L+++ RL+Y+ V + L VG+ + Sbjct: 160 -ALTKNWATRLDYQWVNNIGDAQTVGTRPDNGMLSVGVSY 198 >gi|89055673|ref|YP_511124.1| outer membrane protein, putative [Jannaschia sp. CCS1] gi|88865222|gb|ABD56099.1| outer membrane protein putative [Jannaschia sp. CCS1] Length = 196 Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 16/169 (9%) Query: 28 RRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH------HNAGGSIF 81 RR + AT + G YAG + + + G + Sbjct: 2 RRTVYAIALATAVSATGAAAQDASQWTGFYAGFATNIISPEFDNSTATTPLQEGTGFGAY 61 Query: 82 AGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGIGG----SLRIRGGYEVSDSLLLYA 136 GYN + G E + ++ P + + R+RGGY + + L+Y Sbjct: 62 GGYNYAFGDNFVVGAE--LGFSGPATFQTTLGANDFEFERVLNARVRGGYAMGN-ALVYG 118 Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 T+G + Y A G G+G+E+ L++ + RL+Y ++ Sbjct: 119 TLGYQTVE-YGASAGVSTEGAADGLVYGIGLEML-LNDQVSVRLDYTST 165 >gi|27379463|ref|NP_770992.1| hypothetical protein blr4352 [Bradyrhizobium japonicum USDA 110] gi|27352615|dbj|BAC49617.1| blr4352 [Bradyrhizobium japonicum USDA 110] Length = 154 Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 10/99 (10%) Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET--------GK 150 + D + ++ R G+ V ++ L Y G + Sbjct: 18 LNTAFGAGDDVFSWRANVLATVVGRAGFAVQNN-LFYIKGGYAGVNNRLSVSDTVGPATG 76 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 +G T A G T G G E G++ + + LEY + + Sbjct: 77 SGGQTHWANGWTVGAGWEY-GVTRNWIVGLEYNYAAFGS 114 >gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 372 Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 63/187 (33%), Gaps = 38/187 (20%) Query: 56 PYAGLSALY---NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111 YAG A + + + H GG Y + + + YGV G + Sbjct: 26 FYAGAKAGWASFHDGLTQFDHEGDGGGFDLKYGINRNSVTYGVFGGYQILNQNNFGLATE 85 Query: 112 SLHGIGGSLRI------------------------RGGYEVSDSLLLYATVGPDVAQK-- 145 + G +R + YEV +L +Y VG + + Sbjct: 86 LGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDY 145 Query: 146 YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE-GFYNTIS 198 Y + + + I G G+E ++ L AR+EY+ ++ V+ T+S Sbjct: 146 YVQQRVDKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQYLNRVGNVDKAVRKTVS 204 Query: 199 LGVGMKF 205 + G F Sbjct: 205 IPTGTNF 211 >gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541] gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541] Length = 353 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 34/183 (18%) Query: 48 PIRHDFNGPYAGLSALYNGS--------------FGEEAHHNAGGSIFAGYNVEDSCIMY 93 P + + Y G ++ G++ G ++AGY Sbjct: 23 PKDNTW---YTGGKLGWSHYEHAKFTDEAGDTVGTGKKTRDQLGAGLYAGYQYNQ---YM 76 Query: 94 GVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET- 148 G E + Y N S+ +G SL + Y + + L +Y +G V + Sbjct: 77 GFE--MGYDWFGKMKYKGTNPGSVSSMGVSLTTKLSYPIMEDLDVYTRLGGMVYRTEAKV 134 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA------SKYSKVEGFYNTISLGVG 202 +G+ T + +GVE ++ L RL+Y+ V +S+G+ Sbjct: 135 NNSGKETDTGVSPVYALGVEY-AITPELATRLDYQWVSGMGDKDNIGVSPDNGMLSVGLA 193 Query: 203 MKF 205 +F Sbjct: 194 YRF 196 >gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 378 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 33/187 (17%) Query: 46 YVPIRHDFNGPYAGLSA---LYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGV 95 Y + + + GL+ Y+ G N G +F GY + + +G+ Sbjct: 27 YAGAKAGWASFHDGLTQFDNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNN-FGL 85 Query: 96 EGDVRYTV-------PVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVA 143 ++ Y + + S + YEV +L +Y VG + Sbjct: 86 ATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALV 145 Query: 144 QK--YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 + Y + + I + G G+E ++ L AR+EY+ ++V Sbjct: 146 RNDYYVQQHVDKDSRIKVHNLKPSLLLGAGLEY-AITPELAARVEYQY--LNRVGNLDKA 202 Query: 197 ISLGVGM 203 + VG Sbjct: 203 VRTTVGY 209 >gi|300023990|ref|YP_003756601.1| hypothetical protein Hden_2484 [Hyphomicrobium denitrificans ATCC 51888] gi|299525811|gb|ADJ24280.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC 51888] Length = 495 Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 63/200 (31%), Gaps = 51/200 (25%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGE---EAHHNAGGSIF--------------- 81 + P+ + G Y G+ Y + + GSIF Sbjct: 249 EAPDDSIPPVTSSWTGAYLGVGGGYGVAKNTLELSDRSSEPGSIFSAGIPFGHDGGILFA 308 Query: 82 -AGYNVE-DSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI--------------RGG 125 AGY+ + + G GD Y+ ++++ +R R G Sbjct: 309 TAGYDYQISPRFVIGAFGDADYSHLKQSNSLSFAIDEDAEIRAGTKTQLKNMLMVGGRIG 368 Query: 126 YEVSDSLLLYATVGPDVAQKYETGKA----GEITPIAIGGT------------AGVGVEV 169 Y LL+ + G + +T A + +A GGT G G+E Sbjct: 369 YLARPDTLLFLSGGYANVEADDTNLALGISVDGETVAGGGTTLISGRRLSGGFIGGGIET 428 Query: 170 GGLSESLVARLEYRASKYSK 189 L++SL + EYR Sbjct: 429 R-LNDSLSLKAEYRYIDLGS 447 Score = 42.3 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 47/186 (25%) Query: 48 PIRHDFNGPYAGLSALYNGSFGEEAHHNAG----------------------GSIFAGYN 85 +D+ G G+ Y G + + G ++ AGY+ Sbjct: 25 ASANDWEGISLGVGGGY-GMTKNDLNLGTGPAISSFIDANIGINGFGGSGGFATLSAGYD 83 Query: 86 -VEDSCIMYGVEGDVRYTVPVLA-----------DNIHSLHGIGGSLRIRGGYEVSDSLL 133 V ++ G D ++ NI S+ R GY ++ + L Sbjct: 84 HVLFGPLVVGAFIDYDFSDISTNIGAGSELGEIDANIKFKIENQLSIGGRIGYLIAPTTL 143 Query: 134 LYATVGPDVAQKYET-----------GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 ++T G A+ + G G G GVE +S + EY Sbjct: 144 FFSTFGYAHAESSDIKANLNIGGGSGGGTLAGVGSFDGYFLGGGVETL-ISNGFSIKAEY 202 Query: 183 RASKYS 188 R + Sbjct: 203 RYTSLQ 208 >gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703] gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein [Dickeya dadantii Ech703] Length = 354 Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 42/220 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPY-AG 59 M+K +A+ V+ A AQAA Y + ++ + G Sbjct: 1 MKKTAIAIAVAGFATV----AQAA---------------PNDNTWYAGGKLGWSQFHDTG 41 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV------PVLADNIHSL 113 L+ + + + G +F GY + G E + Y + Sbjct: 42 LNGSGYQTTNDAQENQLGAGVFGGY---QANPYLGFE--MGYDWLGRMKYTGVNRGNFKA 96 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G+ L + Y + D L +Y +G A ++ + A VGVE Sbjct: 97 QGVQ--LAAKLSYPIVDDLDVYTRLGGFVWRADSHDDVSGNSGHDTGVSPLAAVGVEY-A 153 Query: 172 LSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 ++++ RL+Y+ S V G + +S+GV +F Sbjct: 154 ITKNWATRLDYQWVNNIGDASTVGGRPDNGLLSVGVSYRF 193 >gi|148974245|ref|ZP_01811778.1| hypothetical protein VSWAT3_13997 [Vibrionales bacterium SWAT-3] gi|145965942|gb|EDK31190.1| hypothetical protein VSWAT3_13997 [Vibrionales bacterium SWAT-3] Length = 190 Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 48/149 (32%), Gaps = 18/149 (12%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYE 127 G G +++ GY + GVE + Y + S+ GY Sbjct: 48 GNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKQGTAKVSPTSVSVSANLGYT 102 Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR-------- 179 +++ + G AG G G+GVE + E+L R Sbjct: 103 FDNTIRPFVLAGLSSVDLNANKSAGYDDDSGTGFHFGLGVEYTPI-ENLTLRLISQADAV 161 Query: 180 -LEYRASKYS--KVEGFYNTISLGVGMKF 205 +E +Y ++++SLG F Sbjct: 162 SVENYYGQYKTDDKTLAFSSVSLGGSYNF 190 >gi|90578366|ref|ZP_01234177.1| outer membrane protein, putative [Vibrio angustum S14] gi|90441452|gb|EAS66632.1| outer membrane protein, putative [Vibrio angustum S14] Length = 189 Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 24/170 (14%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGG-SIFAGYNVEDSCIMY 93 + T D GPY G S + N ++ GYN ++ Sbjct: 11 VLTTASGAALADQTGPYVGASLGNATTDLKADHWEHNYDENVVAYGLYGGYNFNEN---L 67 Query: 94 GVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA------QKYE 147 G+E + T + + G +L R ++D L L+A G Sbjct: 68 GLEATLGQT----GEQDNIKKGY-ATLTPRVMMPLNDQLSLFAKAGVAYVAVDGDYDGIG 122 Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVAR--LEYRASKYSKVEGFYN 195 +I G TAG GV ++E + R ++Y ++ K + + Sbjct: 123 NMNRHDIDVDGFGWTAGAGVNF-AVAEHIDLRAGIDYLSTDLEKADNDKD 171 >gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica] gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 378 Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 33/187 (17%) Query: 46 YVPIRHDFNGPYAGLSA---LYNGSFGEEAHHNAG-------GSIFAGYNVEDSCIMYGV 95 Y + + + GL+ Y+ G N G +F GY + + +G+ Sbjct: 27 YAGAKAGWASFHDGLTQFDNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNN-FGL 85 Query: 96 EGDVRYTV-------PVLADNIHSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVA 143 ++ Y + + S + YEV +L +Y VG + Sbjct: 86 ATELGYDYFGRVRGNTTFSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALV 145 Query: 144 QK--YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 + Y + + I + G G+E ++ L AR+EY+ ++V Sbjct: 146 RNDYYVQQHVDKDSRIKVHNLKPSLLLGAGLEY-AITPELAARVEYQY--LNRVGNLDKA 202 Query: 197 ISLGVGM 203 + VG Sbjct: 203 VRTTVGY 209 >gi|310816739|ref|YP_003964703.1| TonB-dependent heme/hemoglobin receptor family protein [Ketogulonicigenium vulgare Y25] gi|308755474|gb|ADO43403.1| TonB-dependent heme/hemoglobin receptor family protein [Ketogulonicigenium vulgare Y25] Length = 1121 Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 66/216 (30%), Gaps = 57/216 (26%) Query: 40 TIATNRYVPIRHDFNGPYAGLSAL----------YNGSF----------GEEAHHNAGGS 79 ++ P ++ G YAGL+ Y G + A +A Sbjct: 877 DARSSAVQPFDGNWGGAYAGLTFGAARFAAEGETYAGDGSYNANAAIERTDTAASSAVAG 936 Query: 80 IFAGYNVEDSC-IMYGVEGDVRYT--------------VPVLADNIHSLHGIGGS----- 119 + GY + ++ GVE V + V +N S Sbjct: 937 LQFGYRKQQDSGLVLGVEASVDFARGRAQQYMIDETLDVDRWGENNTRAADYTHSWGATA 996 Query: 120 -LRIRGGYEVSDSLLLYATVGPDVAQKYET--------------GKAGEITPIAIGGTAG 164 LR G + L AT G + ++++T + + + G G Sbjct: 997 MLRGSVGQTFGRAHLF-ATAGLGMMEEHQTRTQYRLVSGIVNYPSFSETDSQLRTGVVVG 1055 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 G++ S +L R EY Y + ++ S G Sbjct: 1056 AGMDY-AFSNALSLRGEYVYGYYPEKNFNFDRASNG 1090 >gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica] Length = 367 Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 21/159 (13%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYN-VEDSCIMYGVEGDVRYT 102 Y + + + GL+ + GE ++ +F GY + + E Y Sbjct: 27 YAGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNNFGLATELGYDYF 86 Query: 103 VPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGK 150 V + + G L ++ YEV +L +Y VG + + Y Sbjct: 87 GRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQN 146 Query: 151 AGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184 + + I G G+E ++ L AR+EY+ Sbjct: 147 VAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184 >gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida] Length = 367 Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 21/159 (13%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYN-VEDSCIMYGVEGDVRYT 102 Y + + + GL+ + GE ++ +F GY + + E Y Sbjct: 27 YAGAKAGWASFHDGLTQFDHKDGGEFGINRNSVTYGVFGGYQILNQNNFGLATELGYDYF 86 Query: 103 VPVLADNIHSLHG----------IGGSLRIRGGYEVSDSLLLYATVGPDVAQK--YETGK 150 V + + G L ++ YEV +L +Y VG + + Y Sbjct: 87 GRVRGNTTFAGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQN 146 Query: 151 AGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA 184 + + I G G+E ++ L AR+EY+ Sbjct: 147 VAKDSRIKAHNLKPSLLLGAGLEY-AITPELAARVEYQY 184 >gi|326424195|ref|NP_762179.2| membrane protein [Vibrio vulnificus CMCP6] gi|319999579|gb|AAO07169.2| membrane protein [Vibrio vulnificus CMCP6] Length = 195 Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 26/175 (14%) Query: 50 RHDFNGPYAGLSALYNGSFGEE--------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 + D +G Y G +F + +++ ++ GY + +E Sbjct: 28 KKDVSGFYLGGGIGTTTAFDDGVGTNDLNLKSNDSTYKLYGGYQF---NRIVAIEAQYTR 84 Query: 102 TVPVLADNIHSLHGI---GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158 + + + H + +L GY +ATVG + G ++ Sbjct: 85 YGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRTEL----DFGPLSKTE 140 Query: 159 IGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYNTISL-------GVGMKF 205 AGVG E E+L R+ Y + G + I++ GV KF Sbjct: 141 TSFRAGVGGEYSPKAIENLNFRVAYEVDSFMFDNGPRDDINIVLGSLYAGVSYKF 195 >gi|253699032|ref|YP_003020221.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251773882|gb|ACT16463.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 459 Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 66/207 (31%), Gaps = 34/207 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K V V +L L F A A V PY Sbjct: 1 MKKFPQLVLVPALLLGLFTQAFA----------------------EVKPESFSVSPYV-- 36 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLHGIGG 118 A Y+ E + GYN +G+E + Y T I + + Sbjct: 37 -AGYSFLGRERLETGPAAGLRGGYNFTSH---FGLEAVLTYISTEGKAYSGIGDVDALNY 92 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178 L + + L+ Y +G + GE+ A G GV+ L++++ Sbjct: 93 HLDMLYHFMPESMLVPYLAMGY-GGHWRDYEGDGEVNRSAFNY--GGGVKY-FLTDAMAL 148 Query: 179 RLEYRASKYSKVEGFYNTISLGVGMKF 205 R + R + ++ + GVG+ F Sbjct: 149 RGDVRHIVMRDHDDTFHNLEYGVGVDF 175 >gi|120556596|ref|YP_960947.1| OmpA domain-containing protein [Marinobacter aquaeolei VT8] gi|120326445|gb|ABM20760.1| OmpA domain protein transmembrane region-containing protein [Marinobacter aquaeolei VT8] Length = 192 Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 9/162 (5%) Query: 40 TIATNRYVPIRHDFNGPYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 A + D +GPY S Y GE N GY + +E + Sbjct: 20 APAVWAQDNVSRDKSGPYISGSYGGYKAHGGEFEDENDLLGAALGYQF---NEFFALEAE 76 Query: 99 VRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 D++ G S R ++DS +YA G + + T Sbjct: 77 YIDFGNFGDDDVEGKLKGAGLSAIGRL--PLTDSFGVYAKAGAFASAFDVEAFDEDETYD 134 Query: 158 AIGGTAGVGVEVGGLSESLVARLEY-RASKYSKVEGFYNTIS 198 + G GV+ ++E L A EY R + + F ++ Sbjct: 135 EVNPFVGAGVDFR-VTEQLTAFAEYNRYNVDIDEDDFNGQVT 175 >gi|117618280|ref|YP_855820.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559687|gb|ABK36635.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 351 Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 26/146 (17%) Query: 49 IRHDFNGPYAGLSALY-----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRY- 101 +D+ YAG+ + G FG++A +A S+F GYN ++ G E + Y Sbjct: 23 PDNDW---YAGVGGGWAIAHDLGDFGKDASKDATALSLFGGYNFTEN---LGAE--LGYL 74 Query: 102 ---TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158 V N S G S+ R + D ++A G V Sbjct: 75 STGDWDVQG-NDFSSQGATLSVIGRL--PLGDIFSVFAEGGGYVYHVKSINGGDNNLAPL 131 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRA 184 AG+G+ L + + + YR Sbjct: 132 ----AGLGL-TAKLHDWVDIQARYRY 152 >gi|320158543|ref|YP_004190921.1| membrane protein [Vibrio vulnificus MO6-24/O] gi|319933855|gb|ADV88718.1| membrane protein [Vibrio vulnificus MO6-24/O] Length = 191 Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 26/175 (14%) Query: 50 RHDFNGPYAGLSALYNGSFGEE--------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 + D +G Y G +F + +++ ++ GY + +E Sbjct: 24 KKDVSGFYLGGGIGTTTAFDDGVGTNDLNLKSNDSTYKLYGGYQF---NRIVAIEAQYTR 80 Query: 102 TVPVLADNIHSLHGI---GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158 + + + H + +L GY +ATVG + G ++ Sbjct: 81 YGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRTEL----DFGPLSKTE 136 Query: 159 IGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYNTISL-------GVGMKF 205 AGVG E E+L R+ Y + G + I++ GV KF Sbjct: 137 TSFRAGVGGEYSPKAIENLNFRVAYEVDSFMFDNGPRDDINIVLGSLYAGVSYKF 191 >gi|330447676|ref|ZP_08311324.1| ompA-like transmembrane domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491867|dbj|GAA05821.1| ompA-like transmembrane domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 186 Score = 43.5 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 27/170 (15%) Query: 41 IATNRYVPIRHDFNGPYAGLSAL----------YNGSFGEEAHHNAGGSIFAGYNVEDSC 90 + T D GPY G S +N ++ E ++ GYN ++ Sbjct: 11 VLTTASGAALADQTGPYVGASLGNATTDLKAENWNYNYDENV---VAYGLYGGYNFTEN- 66 Query: 91 IMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150 G+E + T DNI + +L R ++D L+A G + Sbjct: 67 --LGLEATLGQTGEK--DNIKKGYA---TLTPRVMLPLNDQFSLFAKAGVAYVAADGNWQ 119 Query: 151 AGEITPIAI---GGTAGVGVEVGGLSESLVAR--LEYRASKYSKVEGFYN 195 + I + G TAG GV ++E + R ++Y ++ + + Sbjct: 120 DIKRAHIDVDGWGWTAGAGVNF-AVAEHVDIRAGIDYLSTDLKNADNDKD 168 >gi|37676363|ref|NP_936759.1| hypothetical protein VVA0703 [Vibrio vulnificus YJ016] gi|37200905|dbj|BAC96729.1| hypothetical protein [Vibrio vulnificus YJ016] Length = 195 Score = 43.5 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 26/175 (14%) Query: 50 RHDFNGPYAGLSALYNGSFGEE--------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 + D +G Y G +F + ++ ++ GY + +E Sbjct: 28 KKDVSGFYLGGGIGTTTAFDDGVGTNDLNLKSSDSTYKLYGGYQF---NRIVAIEAQYTR 84 Query: 102 TVPVLADNIHSLHGI---GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158 + + + H + +L GY +ATVG + G ++ Sbjct: 85 YGDIYSKDDADRHMVKPESIALMANLGYTFDSGWRPFATVGLGRTEL----DFGPLSKTE 140 Query: 159 IGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYNTISL-------GVGMKF 205 AGVG E E+L R+ Y + G + +++ GV KF Sbjct: 141 TSFRAGVGGEYSPKAIENLNFRVAYEVDSFMFDNGPRDDVNIVLGSLYAGVSYKF 195 >gi|84385654|ref|ZP_00988685.1| hypothetical protein V12B01_26009 [Vibrio splendidus 12B01] gi|84379634|gb|EAP96486.1| hypothetical protein V12B01_26009 [Vibrio splendidus 12B01] Length = 192 Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 13/133 (9%) Query: 55 GPYAGLSALY-----NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV--PVLA 107 GPY G G + G S++ GY + G+E + YT Sbjct: 26 GPYIGAGLGVYQDSDTDGAGNLDAESMGYSLYGGYQF---NRIVGIE--LGYTDYADYEK 80 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGV 167 L S+ GY +S+ + T G + A G G+GV Sbjct: 81 FGTKLLSPTSLSVAANVGYTFDNSIRPFVTAGLSYVDLNSSNSAFYGDDSGAGFHFGIGV 140 Query: 168 EVGGLSESLVARL 180 E + E+L RL Sbjct: 141 EYNPV-ENLTLRL 152 >gi|260433629|ref|ZP_05787600.1| putative outer membrane protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417457|gb|EEX10716.1| putative outer membrane protein [Silicibacter lacuscaerulensis ITI-1157] Length = 172 Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 43/125 (34%), Gaps = 6/125 (4%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVR 100 + D+ GPYAG + Y + G GSI A GY+++ + G E Sbjct: 14 PVAQMAWAEDWTGPYAGFTFGYTDADGPGGSGGNSGSIGANIGYDLDLGSFVVGGE--FE 71 Query: 101 YTVPVLA-DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 Y L +++RGGYE L Y VG A + I + Sbjct: 72 YDRLNLDLGASEGSLDSVSRVKLRGGYEF-GPALGYVVVGAARANTSSDSDTAAVYGIGV 130 Query: 160 GGTAG 164 G Sbjct: 131 AYPLG 135 >gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430] gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946] gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946] gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430] gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC BAA-2158] Length = 355 Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 69/216 (31%), Gaps = 32/216 (14%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + ++ALA F + A P + G + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG- 118 Y + G G F GY + G E + Y P D + G Sbjct: 49 YENNDGPTHESQLGAGAFLGY---QANQYLGFE--LGYDWLGRMPNKGDVTNGAFKAQGI 103 Query: 119 SLRIRGGYEVSDSLLLYATVG-----PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 + + Y ++D L +Y +G D Q T + A VGVE ++ Sbjct: 104 QMAAKLSYPIADDLDVYTRLGGMVWRADATQTNPTYGRISNHDTGVSPLAAVGVEY-AVT 162 Query: 174 ESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 ++ RL+Y+ V + L VG+ + Sbjct: 163 KNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198 >gi|311277854|ref|YP_003940085.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1] gi|308747049|gb|ADO46801.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1] Length = 347 Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 15/147 (10%) Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-----IGGSLRIRG 124 + N GG IF GY + + VEG Y + + + G G L ++ Sbjct: 59 DTNSDNVGGGIFGGY--QINNW-LAVEGGYDYLGNMQFNGNNGAAGGKMKSQGLQLSLKA 115 Query: 125 GYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 Y +SDS LY G + + VG E + SL RLEY+ Sbjct: 116 SYGLSDSWDLYGRAGAMGYRAETEAAGHSTFDTGVRPLLAVGTEY-AFTPSLAGRLEYQW 174 Query: 185 -SKYSK-----VEGFYNTISLGVGMKF 205 S + ++++ G+ +F Sbjct: 175 VSNVGNENQIGMTADASSVTAGIVYRF 201 >gi|320106608|ref|YP_004182198.1| hypothetical protein AciPR4_1381 [Terriglobus saanensis SP1PR4] gi|319925129|gb|ADV82204.1| hypothetical protein AciPR4_1381 [Terriglobus saanensis SP1PR4] Length = 192 Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 11/129 (8%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTVPVLADN-IHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 F GY D YGVE ++R+ D + GG Y V + Sbjct: 70 FGGYATFDWREHYGVELNIRHAKGKQDDGQSENTVEFGGR------YVVVRKYRMAPYAK 123 Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NT 196 + + G + GVGV+ + + R EY + V Sbjct: 124 AMIGRGVYNYPDGAGSLAFNLYALGVGVDYHA-TSYINVRAEYEYQSWLNVPIQNPQPQL 182 Query: 197 ISLGVGMKF 205 IS+GV +F Sbjct: 183 ISIGVAYRF 191 >gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617] Length = 355 Score = 43.1 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 70/216 (32%), Gaps = 32/216 (14%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + ++ALA F + A P + G + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG- 118 Y + G G F GY + G E + Y P D + G Sbjct: 49 YENNDGPTHESQLGAGAFLGY---QANQYLGFE--LGYDWLGRMPNKGDVTNGAFKAQGI 103 Query: 119 SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLS 173 + + Y ++D L +Y +G G I+ G + A VGVE ++ Sbjct: 104 QMAAKLSYPIADDLDVYTRLGGMVWRADATQTNPTFGRISNHDTGVSPLAAVGVEY-AVT 162 Query: 174 ESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 ++ RL+Y+ V + L VG+ + Sbjct: 163 KNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198 >gi|298369428|ref|ZP_06980746.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014 str. F0314] gi|298283431|gb|EFI24918.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014 str. F0314] Length = 361 Score = 43.1 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 12/157 (7%) Query: 59 GLSALYNGSFGEEAHHNAGGSIFAGYNVED--SCIMY---GVEGDVRYTVPVLADNIHSL 113 G S ++ +A G + AG + +Y G + + + + + Sbjct: 207 GASVKRGNRRNKDRDTSAAGQVGAGVQFNEWLGGEVYYQGGDKQEYDAPENLGNEKVEVR 266 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 + G R+ G +V+ ++A G + + + TAGVG V ++ Sbjct: 267 NDTYG-GRLTAGTKVAKKARVFAKAGVAGVRHKSKTAGAKDSDTKARATAGVGATVD-VN 324 Query: 174 ESLVARLEY-----RASKYSKVEGFYNTISLGVGMKF 205 ++ R +Y R S + + +G KF Sbjct: 325 DNWAVRADYDHYFKRNSDEDVKWKGADYLGVGAQYKF 361 >gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99] gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99] Length = 355 Score = 43.1 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 67/214 (31%), Gaps = 28/214 (13%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + ++ALA F + A P + G + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGG---SL 120 Y + G G F GY + G E + + + L Sbjct: 49 YQNNNGPTHESQLGAGAFLGY---QANQYLGFELGYDWLGRMPNKGSVTNGAFKAQGVQL 105 Query: 121 RIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLSES 175 + Y ++D L +Y +G G I+ G + A VGVE L+++ Sbjct: 106 AAKLSYPIADDLDVYTRLGGMVWRADSTQTNPTYGRISNHDTGVSPLAAVGVEY-ALTKN 164 Query: 176 LVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 RL+Y+ V + L VG+ + Sbjct: 165 WATRLDYQWVNNIGDAGTVGTRPDNSMLSVGVSY 198 >gi|149189798|ref|ZP_01868078.1| hypothetical protein VSAK1_12800 [Vibrio shilonii AK1] gi|148836284|gb|EDL53241.1| hypothetical protein VSAK1_12800 [Vibrio shilonii AK1] Length = 187 Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 20/166 (12%) Query: 54 NGPYAGLSALY-----------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT 102 +G Y G + + + + AGY+ M+G E Sbjct: 28 SGFYLGTYLGAMSAKNTDNVVNSKTETSVKSNFRSLGLKAGYDF---NSMFGAEMRHSRD 84 Query: 103 VPVLADNIHS-LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETG-KAGEITPIAIG 160 + N +L + + VSDS+ LY G + + + G K + Sbjct: 85 SGKIEKNSQGLAVDHQTALYGKVKFNVSDSIELYGLAGVNNIRLKQAGYKGNDNKKTINS 144 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY-NTISLGVGMKF 205 + GVG + + SL A LE K S + F ++I+LG+ KF Sbjct: 145 FSYGVGAQYN-FTNSLGANLE--LMKLSNHKQFDAHSINLGLAYKF 187 >gi|297539083|ref|YP_003674852.1| OmpA domain-containing protein transmembrane region-containing protein [Methylotenera sp. 301] gi|297258430|gb|ADI30275.1| OmpA domain protein transmembrane region-containing protein [Methylotenera sp. 301] Length = 187 Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 10/156 (6%) Query: 54 NGPYAGLSALY-----NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 G YAG + N GE+ +A G I GY GVEG+ V Sbjct: 27 EGFYAGGNVGVGKPNINTPNGEDKSSSAVGGIVLGYKF---NKYLGVEGEYTGIGKVTDK 83 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK-AGEITPIAIGGTAGVGV 167 + G S+ G ++D LY +G + + A T G+G Sbjct: 84 VSGTAKGDAASIAAIGFLPLNDEFNLYGKLGVAATKTKVSSSLAPMNDDTRTSVTYGLGG 143 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 E +++++ RL + + + + + G + Sbjct: 144 EYN-VNKNIGIRLGWDHYSAAVKDVTNSKDNFGANV 178 >gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] Length = 335 Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 15/132 (11%) Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD-NIHSLHGIGGSLRIRGG---YEV 128 + GG +FAGYNV + + YT A+ N + G + Sbjct: 53 RDDMGGGLFAGYNVTPWFAV-----ETGYTWLGRAEFNNDYKMRVDQQAIDLVGKFTWHA 107 Query: 129 SDSLLLYATVGPDVAQKYETGKAGE--ITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 +D + LYA +G G E +G TAG G+E L + L ARLEY+ Sbjct: 108 TDYMGLYAKLGGAYYFSEAKGFGAEKYKDDGVVG-TAGAGLEF-FLDDHLSARLEYQY-- 163 Query: 187 YSKVEGFYNTIS 198 Y VE + Sbjct: 164 YHDVELKDKDVR 175 >gi|115522859|ref|YP_779770.1| porin [Rhodopseudomonas palustris BisA53] gi|115516806|gb|ABJ04790.1| porin [Rhodopseudomonas palustris BisA53] Length = 275 Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 65/238 (27%), Gaps = 74/238 (31%) Query: 8 VGVSSLALASF-CSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN------------ 54 + + ++AL + SA AAD V +++ Sbjct: 4 ILLGAVALTALCSSAVAADLPVYTK-----------APVVVAPVFNWSGFYVGGFVGGAV 52 Query: 55 --------------GPYAGLSALYNGSFGEEA---HHNAGGSIFAGYNVE--DSCIMYGV 95 YN + + + G G N + S ++GV Sbjct: 53 ADGNANSTEPRGAAPAAPFAPVFYNATAFDNNYSLSNTFIGGGTIGLNYQPSASNWLFGV 112 Query: 96 EGDVRY----------------TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG 139 EG+V Y + + + + G R GY D +L YA G Sbjct: 113 EGEVGYLKLSRSVVDINPVPAGAPGADSIDRTRIGDLYGVFAARLGYAF-DRVLFYAKGG 171 Query: 140 PDVAQKY-------------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 K + + + AG G+E +++S + EY Sbjct: 172 AAFVGKEASFTDKCAVAPCSVNTLNTDYSGTQLTWAAGGGLEY-AINDSWSVKGEYLY 228 >gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96] gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96] gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163] Length = 355 Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 70/216 (32%), Gaps = 32/216 (14%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + ++ALA F + A P + G + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDDTWYTGGKLG---------WSQYHDTGYY---GNG 48 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG- 118 Y + G G F GY + G E + Y P D + G Sbjct: 49 YENNDGPTHESQLGAGAFLGY---QANQYLGFE--LGYDWLGRMPNKGDVTNGAFKAQGI 103 Query: 119 SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLS 173 + + Y ++D L +Y +G G I+ G + A VGVE ++ Sbjct: 104 QMAAKLSYPIADDLDVYTRLGGMVWRADATQTNPTFGRISNHDTGVSPLAAVGVEY-AVT 162 Query: 174 ESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 ++ RL+Y+ V + L VG+ + Sbjct: 163 KNWATRLDYQWVNNIGDAGTVGARPDNSMLSVGVSY 198 >gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp. damselae CIP 102761] Length = 317 Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 13/158 (8%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH-NAGGSIFAGYNVEDSCIMYGVEGDV 99 A + G G + G N G F GY + + VE Sbjct: 10 SAAANAATDNPFYAGARIGNAIYDTDHKGPNVDDANLAGGAFLGYQIAP---WFAVEAGY 66 Query: 100 RYTVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIA 158 + + G+ + + Y ++D + ++ +G + A Sbjct: 67 THLGSTTIKGTDAKFRTQGADIVGKYSYAINDKIDVFGKLGAYYYDVHTKNLADAKE--- 123 Query: 159 IGG--TAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 G TAGVG E L+ +L +EY+ Y+ V G Sbjct: 124 HGWAGTAGVGAEYY-LTNNLSTAVEYQY--YNDVAGAD 158 >gi|119776560|ref|YP_929300.1| outer membrane protein [Shewanella amazonensis SB2B] gi|119769060|gb|ABM01631.1| outer membrane protein, putative [Shewanella amazonensis SB2B] Length = 181 Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 10/135 (7%) Query: 55 GPYAGL---SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 G YAG + + G G + GYN DS +G+E V T + Sbjct: 26 GFYAGGYVSNTNLDDKIGPFDESAWGLGAYGGYNFNDS---FGLETSVFGTDSFIDGVDL 82 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 + G+ + +R + SD++ +Y G V Q + + + G G GV++ Sbjct: 83 QVVGLTFAPTVR--HAFSDTVTVYLKGGV-VYQVIASDDSLDDDYQGTGYLLGAGVDIS- 138 Query: 172 LSESLVARLEYRASK 186 S +L R+ Y S+ Sbjct: 139 FSSNLAMRVFYEFSE 153 >gi|254696122|ref|ZP_05157950.1| porin [Brucella abortus bv. 2 str. 86/8/59] gi|254705299|ref|ZP_05167127.1| porin [Brucella suis bv. 3 str. 686] gi|260760487|ref|ZP_05872833.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|260670922|gb|EEX57743.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59] Length = 71 Score = 42.7 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 10/76 (13%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51 Query: 63 LYNGSFGEEAHHNAGG 78 Y + + GG Sbjct: 52 GYGWGRAKLENRTNGG 67 >gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 351 Score = 42.7 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 62/190 (32%), Gaps = 34/190 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHN---------AGGSIFAGYNVEDSCI 91 + P + Y G ++ + +H GG F GY + Sbjct: 16 ATVAQAAPKDDTW---YVGGKLGWSHYYDNSINHFGSTNVRPDQFGGGAFFGY---QANP 69 Query: 92 MYGVEGDVRYTV----PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG---PDVAQ 144 G E + Y DN + G L + Y ++D L +Y +G Sbjct: 70 YLGFE--MGYDWLGRMEYRGDNNGAFKSQGVQLAAKLSYPIADDLDIYTRLGGMVWRADG 127 Query: 145 KYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGF----YNT 196 + G + + A +GVE L++ RL+Y+ S NT Sbjct: 128 SANSATKGRYIDSNDTGVSPLAAIGVEY-ALNKDWATRLDYQFVSNIGDANETAARPDNT 186 Query: 197 -ISLGVGMKF 205 +S+GV +F Sbjct: 187 LLSVGVTYRF 196 >gi|84386141|ref|ZP_00989170.1| hypothetical protein V12B01_18146 [Vibrio splendidus 12B01] gi|84378911|gb|EAP95765.1| hypothetical protein V12B01_18146 [Vibrio splendidus 12B01] Length = 189 Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 36/113 (31%), Gaps = 7/113 (6%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYE 127 G G +++ GY + GVE + Y L SL GY Sbjct: 48 GSLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKKGTAKLSPTSVSLSANLGYT 102 Query: 128 VSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 +++ + G AG G GVGVE + E L RL Sbjct: 103 FDNTIRPFVLAGLSSVDLNANKSAGYADDSGTGFHFGVGVEYTPI-EHLTLRL 154 >gi|295097419|emb|CBK86509.1| Opacity protein and related surface antigens [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 203 Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 28/174 (16%) Query: 57 YAGLSALYNGSFG----------------EEAHHNAGGSIFAGYNVEDSCIMYGVE---G 97 Y+G ++ F + H N GG ++ GY + + G G Sbjct: 29 YSGAKFGWSHYFDTNMGSKAFENTYSDHFDFNHDNVGGGVYTGYQITPWLAVEGGYDYLG 88 Query: 98 DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 +++ A G+ SL+ Y +S +Y G + Sbjct: 89 NMQIKGQHGAGAQMKTQGLQMSLKA--SYALSSDWDIYGRAGAMGYRAESDVSGHNRFET 146 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205 + A VG E +++ RLEY+ S V ++++ G+ +F Sbjct: 147 GVRPLAAVGTEY-AFNKNWAGRLEYQWVSNVGNVNQIGVSSDLSSVTAGLSYRF 199 >gi|296104524|ref|YP_003614670.1| putative outer membrane protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058983|gb|ADF63721.1| putative outer membrane protein A [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 204 Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 29/175 (16%) Query: 57 YAGLSALYNGSFGEEA-----------------HHNAGGSIFAGYNVEDSCIMYGVE--- 96 Y+G ++ F H N GG ++AGY + + G Sbjct: 29 YSGAKFGWSHYFDANTGSKASDNNNGSNQYNIDHDNVGGGVYAGYQMTPWLALEGGYDYL 88 Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156 G+++ A G+ SL+ Y V+DS +Y G + Sbjct: 89 GNMQIKGKHSAGAQMKSQGLQMSLKA--SYAVTDSWDIYGRAGAMAYRAESDVSGHNRFE 146 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK-----VEGFYNTISLGVGMKF 205 + A VG E +++L RLEY+ S V ++++ G+ +F Sbjct: 147 TGVRPLAAVGTEY-AFNKNLAGRLEYQWVSNVGNANQIGVSSDVSSVTAGLTWRF 200 >gi|89074664|ref|ZP_01161129.1| outer membrane protein, putative [Photobacterium sp. SKA34] gi|89049602|gb|EAR55162.1| outer membrane protein, putative [Photobacterium sp. SKA34] Length = 189 Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 24/170 (14%) Query: 41 IATNRYVPIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMY 93 + T D GPY G S + + ++ GYN ++ Sbjct: 11 VLTTASGAALADQTGPYIGASVGNATTDLKADHWEYNYDENVLAYGVYGGYNFTEN---L 67 Query: 94 GVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153 G+E + T + + G +L R ++D L L+A G Sbjct: 68 GLEATLGQT----GEQDNIKKGY-ATLTPRLMMPINDQLSLFAKAGVAYVAVDGDYDGAG 122 Query: 154 I------TPIAIGGTAGVGVEVGGLSESLVAR--LEYRASKYSKVEGFYN 195 G TAG GV ++E + R ++Y ++ K + + Sbjct: 123 DINRHDIDVDGFGWTAGAGVNF-AVAEHVDLRAGIDYLSTDLEKADNDKD 171 >gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179] gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179] Length = 361 Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 29/225 (12%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ +S LA AQAA + + + V + G A Sbjct: 1 MKKTAIALAIS--GLAFVSVAQAA--PQANTFYAGAKAGWASFHNDVKQLDNIYGQDAYS 56 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVL---ADNI---HSLH 114 S + FG + G +F GY + D+ + VE + + DN+ H+ H Sbjct: 57 SLEQDEKFGVHRNSVTYG-VFGGYQITDN---FAVEAGYDFYGQLKAHQGDNVRFRHTAH 112 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-----YETGKAGEITPIAIGGTAGVGVEV 169 G+ SL+ D L +Y +G + + K + + GVE Sbjct: 113 GLNLSLKASYPVAYVDGLDVYGRLGAALIRSDYAVHTNGEKTLSEHKLKVSPVFAAGVEY 172 Query: 170 GGLSESLVARLEYRA-SKYSKVEGFYN--------TISLGVGMKF 205 L E L ARLEY+ +K KV+ F + ++SLG+ +F Sbjct: 173 AILPE-LAARLEYQWIAKVGKVDQFEDISYSPSIGSVSLGLSYRF 216 >gi|189467894|ref|ZP_03016679.1| hypothetical protein BACINT_04286 [Bacteroides intestinalis DSM 17393] gi|189436158|gb|EDV05143.1| hypothetical protein BACINT_04286 [Bacteroides intestinalis DSM 17393] Length = 1119 Score = 42.3 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 19/100 (19%) Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKAGEITPI-- 157 V +N G +L++R GY V+ + + Y T G V+Q Sbjct: 681 AWKVNEENFLQAIGWINTLKVRVGYGVTGNASVSPYQTGGAMVSQWANKPFGQGAVTTNT 740 Query: 158 -----------AIGG--TAG--VGVEVGGLSESLVARLEY 182 +G TA VG++ G L+ + EY Sbjct: 741 TGAKASVLPNKMLGWEKTASTNVGIDFGFLNNRITGSAEY 780 >gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z] gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein [Actinobacillus succinogenes 130Z] Length = 356 Score = 41.9 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 41/189 (21%) Query: 56 PYAGLSALYNG-------------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT 102 YAG ++ + G ++ +F GY + + +G+ ++ Y Sbjct: 28 FYAGARVGWSAMHHGVDRIADQFVTDGGLNRNSVTYGVFGGYQILNQNN-FGLAAELGYD 86 Query: 103 --VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK-------YETGKAGE 153 AD G SL ++ YE+ L +Y VG + + +G A + Sbjct: 87 FFGKTKADAAGYHAAHGASLALKPSYEIYPDLDVYGKVGVALVRNMYKAETLSASGDAEK 146 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFY----------------NT 196 G GVE L E L ARLEY+ SK ++ ++ Sbjct: 147 FNKTKASLILGAGVEYAILPE-LAARLEYQWLSKAGNLDSALEDAGYNGTNARYSPDIHS 205 Query: 197 ISLGVGMKF 205 ++ G+ +F Sbjct: 206 VTAGLSYRF 214 >gi|52425275|ref|YP_088412.1| OmpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307327|gb|AAU37827.1| OmpA protein [Mannheimia succiniciproducens MBEL55E] Length = 273 Score = 41.9 bits (97), Expect = 0.047, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 24/182 (13%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYGVE------GD 98 Y R + + G+ A +N ++ +F GY + + VE G Sbjct: 29 YAGARAGWASFHDGVDAFHNSDGLSAKKNSVTYGVFGGYQILNQNNFGLAVELGYDDYGR 88 Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV--AQKYETGKAGEITP 156 +R + HG+ S++ YEV D L +YA VG + + Sbjct: 89 IRLIETDAKRGKFTNHGVNLSIKP--SYEVLDGLDVYARVGAALIRTDYKDYSIDAAGHS 146 Query: 157 IAIGGTAGVGVEVGG-LSESLVARLEY----------RASKYSKVEGFYN--TISLGVGM 203 + + T G+E + L RLEY + S Y+ + + ++ G+ Sbjct: 147 LKVSPTFAAGLEYALPILPELAMRLEYQWIENVGRDQKWSGYNDADFTPDIGAVTFGLSY 206 Query: 204 KF 205 +F Sbjct: 207 RF 208 >gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345] Length = 356 Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 58/193 (30%), Gaps = 24/193 (12%) Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS------FGEEAHHNAGG-SIFAGY 84 + G V + P Y G A + N G FAGY Sbjct: 19 YQSLGSVYAAEADSSEPANEFAPYFYLGAKAGQMHYQNACESWSVSCDGNYVGFGGFAGY 78 Query: 85 N-VEDSCIMYG----VEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138 + E Y+ V + S+ G S R G +S+ L+A Sbjct: 79 QAWQYLGFETAYLDLGEAVSGYSESAVNNTYVGSMKGWELSAVTRFG--LSEDFELFAKA 136 Query: 139 GPDVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLSESLVARLEYRASKYSKVEGF--- 193 G G + G G G+ +S S VARLEY+ + Sbjct: 137 GSFYWDGDNQGPYSRNSDS--GWAPMLGAGL-AYQISPSWVARLEYQYIDKLGSDLIGGS 193 Query: 194 -YNTISLGVGMKF 205 + +LG+ +F Sbjct: 194 NGHLTTLGISYRF 206 >gi|114776382|ref|ZP_01451427.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1] gi|114553212|gb|EAU55610.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1] Length = 251 Score = 41.9 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 61/189 (32%), Gaps = 39/189 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M K F +SL LA C+AQA++ PY GL Sbjct: 65 MTKTFKIAAATSLLLACACTAQASE------------------------------PYVGL 94 Query: 61 SAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI---HSLHGI 116 +N G AGG + G + + G E + T + Sbjct: 95 GVGAFNLGSGVTKKAVAGGYLQLGDDFSE---YLGGEVRIGTTGKSGEELTLQPRMKIEY 151 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQK-YETGKAGEITPIAIGGTAGVGVEVGGLSES 175 G+ ++ Y+ +D + YA +G + Y G G+GV+ L++ Sbjct: 152 FGAAYLKPKYQFNDQWMGYALLGIATLRSSYSETGLAVQKKTRTGYAYGLGVQYR-LADE 210 Query: 176 LVARLEYRA 184 LEY Sbjct: 211 YSIGLEYSH 219 >gi|160873391|ref|YP_001552707.1| OmpA domain-containing protein [Shewanella baltica OS195] gi|160858913|gb|ABX47447.1| OmpA domain protein transmembrane region-containing protein [Shewanella baltica OS195] Length = 186 Score = 41.9 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 17/175 (9%) Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 V D G Y G + + + G ++ GYN +G+E ++ Sbjct: 17 AATQVSAATDTTGFYVGGALNRVTADAFDGSETGTGVGVYGGYNF---NEWFGLEANLFA 73 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161 T + ++ G S + +++D YA VG G + G Sbjct: 74 TGDLGDKDVDISAG-ALSFTPKFTAQINDIFSAYAKVGIASMAVNVDGYGYDEDFTGFGW 132 Query: 162 TAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205 T GVGV ++E L R+ Y ++ ++GV +F Sbjct: 133 TYGVGVNA-AVTEHLNIRVSYDVTTGDLDADRSYLGLKDIDTDIKQFAVGVHYQF 186 >gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3] gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3] Length = 364 Score = 41.9 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 73/223 (32%), Gaps = 39/223 (17%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 QK+ ++ALA F + A P + G + ++ G Y Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLG---------WSQYHDTGFY---G 54 Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLH 114 + + G + G F GY V G E + Y + + Sbjct: 55 NGFQNNNGPTRNDQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMAYKGSVDNGAFKAQ 109 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDV------AQKYETGKAGEITPIAIGGTAGVGVE 168 G+ L + GY ++D L +Y +G V TG + + GVE Sbjct: 110 GVQ--LTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVE 167 Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 ++ + RLEY+ V + +SLGV +F Sbjct: 168 -WAVTRDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF 209 >gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 364 Score = 41.9 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 73/223 (32%), Gaps = 39/223 (17%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 QK+ ++ALA F + A P + G + ++ G Y Sbjct: 7 QKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLG---------WSQYHDTGFY---G 54 Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLH 114 + + G + G F GY V G E + Y + + Sbjct: 55 NGFQNNNGPTRNDQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMAYKGSVDNGAFKAQ 109 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDV------AQKYETGKAGEITPIAIGGTAGVGVE 168 G+ L + GY ++D L +Y +G V TG + + GVE Sbjct: 110 GVQ--LTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVE 167 Query: 169 VGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 ++ + RLEY+ V + +SLGV +F Sbjct: 168 -WAVTRDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF 209 >gi|145297581|ref|YP_001140422.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] gi|142850353|gb|ABO88674.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] Length = 343 Score = 41.9 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 24/160 (15%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105 Y + ++ Y G+ + +E + G FAGY + + G+E Y Sbjct: 28 YGGAKLGWSNFY-GVDENNITTLLDEDNDEVGAGAFAGYQINQN---LGIELGYDYLGNY 83 Query: 106 LADNIHSLHGIGGSLRI-------RGGYEVSDSL----LLYATVGPDVAQKYETGKAGEI 154 S + + G+ V+++L L G + K + Sbjct: 84 KYSGTRSGAAFNDKVEAQLAQLTLKLGFPVAENLDLYGRLGGGYGWASSDKLDNDG---- 139 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASK-YSKVEGF 193 +G E + ARLEY+ S Y E Sbjct: 140 ---RFNFVGALGAEYAFNLD-WAARLEYQYSSPYGDREDT 175 >gi|29654891|ref|NP_820583.1| opacity family porin protein [Coxiella burnetii RSA 493] gi|161830942|ref|YP_001597432.1| opacity family porin protein [Coxiella burnetii RSA 331] gi|165924228|ref|ZP_02220060.1| opacity family porin protein [Coxiella burnetii RSA 334] gi|212212051|ref|YP_002302987.1| heat resistant agglutinin [Coxiella burnetii CbuG_Q212] gi|81628627|sp|Q83BB2|Y1600_COXBU RecName: Full=Uncharacterized protein CBU_1600; Flags: Precursor gi|29542160|gb|AAO91097.1| heat resistant agglutinin [Coxiella burnetii RSA 493] gi|161762809|gb|ABX78451.1| opacity family porin protein [Coxiella burnetii RSA 331] gi|165916327|gb|EDR34931.1| opacity family porin protein [Coxiella burnetii RSA 334] gi|212010461|gb|ACJ17842.1| heat resistant agglutinin [Coxiella burnetii CbuG_Q212] Length = 181 Score = 41.9 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96 +P I V +GPY GL G + + GY + + I E Sbjct: 13 AIPPIYAGGAVDTPFLNSGPYVGLHGGVALPSGSDLNAGPVVGAQVGYRMGNVRI----E 68 Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYE--VSDSLLLYATVG------PDVAQKYET 148 G + Y L N + + +L G Y+ + L+ + VG Sbjct: 69 GALSYYSNSLEANSDAKLRMT-TLMANGYYDFNFNAPLVPFVGVGVGWVHAWRTNNGVLL 127 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + + A G AGV +S + ++YR ++ G N I + V +F Sbjct: 128 NRGPDNNEFAYQGIAGV---SFRVSPRVTLGVDYRYLGWTDGNGSQNLIEMSVNYQF 181 >gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827] gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827] Length = 357 Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 54/188 (28%), Gaps = 39/188 (20%) Query: 48 PIRHDFNGPYAGLSALYNGS--------------FGEEAHHNAGGSIFAGYNVEDSCIMY 93 P + + Y G ++ G +AGY Sbjct: 23 PKDNTW---YTGAKLGWSHYEDTSFTPVDRENTVGKSTDRDTFGAGAYAGYQYNQ---YM 76 Query: 94 GVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 G E + Y + G SL + Y V D L +Y +G V + Sbjct: 77 GFE--LGYDWFGKMKYKGAGNNGDLKSMGVSLTTKLSYPVMDDLDVYTRLGGMVWRTDVK 134 Query: 149 G-----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA------SKYSKVEGFYNTI 197 + + +GVE ++ + RL+Y+ + V + Sbjct: 135 AHQTGEDRYKENDTGVSPVYALGVEY-AITPNWATRLDYQWVSNIGDNDNLGVRPDNGML 193 Query: 198 SLGVGMKF 205 S+G+ +F Sbjct: 194 SVGLAYRF 201 >gi|304411789|ref|ZP_07393401.1| OmpA domain-containing protein [Shewanella baltica OS183] gi|307306159|ref|ZP_07585904.1| OmpA domain-containing protein [Shewanella baltica BA175] gi|304349977|gb|EFM14383.1| OmpA domain-containing protein [Shewanella baltica OS183] gi|306911032|gb|EFN41459.1| OmpA domain-containing protein [Shewanella baltica BA175] Length = 186 Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 21/177 (11%) Query: 43 TNRYVPIRHDFNGPYAGLS---ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 V D G Y G + + G E G +N +G+E ++ Sbjct: 17 AATQVSAATDTTGFYVGGALNRVTADTFGGSETGTGVGVYGGYNFNEW-----FGLEANL 71 Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 T + ++ G S + +++D YA VG G + Sbjct: 72 FATGDLGDKDVDISAG-ALSFTPKFTAQINDIFSAYAKVGIASMAVNVDGYGYDEDFTGF 130 Query: 160 GGTAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205 G T GVGV ++E L R+ Y ++ ++GV +F Sbjct: 131 GWTYGVGVNA-AITEHLNIRVSYDVTTGDLDADRSYLGLKDIDTDIKQFAVGVHYQF 186 >gi|218675816|ref|YP_002394635.1| Outer membrane protein [Vibrio splendidus LGP32] gi|218324084|emb|CAV25231.1| Outer membrane protein [Vibrio splendidus LGP32] Length = 196 Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 12/132 (9%) Query: 55 GPYAGLSALYNGSFGEEAH-----HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLAD 108 G Y G + H G +++ GY + GVE + Y + Sbjct: 33 GAYVGGGLSVYQDSDTDGHGNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKN 87 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 L S GY +++ + G + A G GVGVE Sbjct: 88 GAEKLSPTSISASANIGYTFDNTIRPFVLAGLSSVDLHANQAANYGDDSGTGFHFGVGVE 147 Query: 169 VGGLSESLVARL 180 + E L RL Sbjct: 148 YTPI-EHLTLRL 158 >gi|86144751|ref|ZP_01063083.1| hypothetical protein MED222_10078 [Vibrio sp. MED222] gi|85837650|gb|EAQ55762.1| hypothetical protein MED222_10078 [Vibrio sp. MED222] Length = 196 Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 12/132 (9%) Query: 55 GPYAGLSALYNGSFGEEAH-----HNAGGSIFAGYNVEDSCIMYGVEGDVRYT-VPVLAD 108 G Y G + H G +++ GY + GVE + Y + Sbjct: 33 GAYVGGGLSVYQDSDTDGHGNLDSDGMGYNLYGGYQF---NRIVGVE--LGYNDYADYKN 87 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 L S GY +++ + G + A G GVGVE Sbjct: 88 GAEKLSPTSISASANIGYTFDNTIRPFVLAGLSSVDLHANQAANYGDDSGTGFHFGVGVE 147 Query: 169 VGGLSESLVARL 180 + E L RL Sbjct: 148 YTPI-EHLTLRL 158 >gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1] gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1] Length = 338 Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 52/177 (29%), Gaps = 33/177 (18%) Query: 47 VPIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99 +P+ D +G Y G N S ++ GY+ D + + Sbjct: 17 LPVVAD-DGFYLGGRLGGSQLSDACNVSAAPCTDSGFSAGVYTGYDWNDY-----IALEF 70 Query: 100 RYTV-----PVLADNIHSLHGIGGS---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151 Y D S L + Y +D ++ VG Sbjct: 71 AYDWLGSYETSFVDGAEYRRDANLSALTLAPKFSYPFNDEWAIFGKVGAAYTM-----YD 125 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSK--VEGFYNTISLGVGMKF 205 + +G GVG+E + + RLEY R + +T LG+ F Sbjct: 126 DRKSTALMG---GVGLEYDFAT-AWSGRLEYQRINDAKDDWFNTDVDTFWLGISYSF 178 >gi|315265620|gb|ADT92473.1| OmpA domain-containing protein [Shewanella baltica OS678] Length = 185 Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 17/175 (9%) Query: 43 TNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 V D G Y G + + + G ++ GYN +G+E ++ Sbjct: 16 AATQVSAATDTTGFYVGGALNRVTADAFDGSETGTGVGVYGGYNF---NEWFGLEANLFA 72 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161 T + ++ G S + +++D YA VG G + G Sbjct: 73 TGDLGDKDVDISAG-ALSFTPKFTAQINDIFSAYAKVGIASMAVNVDGYGYDEDFTGFGW 131 Query: 162 TAGVGVEVGGLSESLVARLEY-----------RASKYSKVEGFYNTISLGVGMKF 205 T GVGV ++E L R+ Y ++ ++GV +F Sbjct: 132 TYGVGVNA-AVTEHLNIRVSYDVTTGDLDADRSYLGLKDIDTDIKQFAVGVHYQF 185 >gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591] gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein [Dickeya zeae Ech1591] Length = 355 Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHN-----------AGGSIFAGYNVEDS 89 + P + + YAG ++ + N G F GY + Sbjct: 16 ATVAQAAPNDNTW---YAGGKLGWSQYHDSGLNGNGYNVTNAAQNQLGAGAFGGY---QA 69 Query: 90 CIMYGVEGDVRYTVP---VLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y G L + Y + D + +Y +G V + Sbjct: 70 NPYLGFE--MGYDWLGRMKYNGGNQGSFKAQGIQLAAKLSYPIVDDVDVYTRLGGFVWRA 127 Query: 146 YETGKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--IS 198 +G + A VGVE ++++ RL+Y+ S V G + +S Sbjct: 128 DSHDNSGLNDHDTGVSPLAAVGVEY-AITKNWATRLDYQWVNNIGDASTVGGRPDNGLLS 186 Query: 199 LGVGMKF 205 +GV +F Sbjct: 187 VGVSYRF 193 >gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976] gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976] Length = 383 Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 26/199 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ VS LALA AQAA P + + G V + + ++ + Y Sbjct: 1 MKKTVIALAVSGLALA--SVAQAA-PQQNTFYAGAKVGQSSFHHGVNQLKFGHDDRYNDE 57 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYN-VEDSCIMYGVEGDVRYTVPVLADN------IHSL 113 + Y + + +F GY + + E Y V + HS Sbjct: 58 TRTYGINRNSVTY-----GVFGGYQILNQNNFGLAAELGYDYYGRVRGNKGEFRSFKHSA 112 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGV 165 HG+ +L+ YEV +L +Y VG V + + + G Sbjct: 113 HGLNFALKP--SYEVLPNLDVYGKVGVAVVRNDYKFYSAENTNEPTEKFHKLKASTILGA 170 Query: 166 GVEVGGLSESLVARLEYRA 184 GVE L E L AR+EY+ Sbjct: 171 GVEYVILPE-LAARVEYQY 188 >gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700] gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700] Length = 346 Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 6/144 (4%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV 105 Y + + + GL +G+ G+ ++ IF GY + D+ + Sbjct: 29 YAGAKAGWASVHHGLGQFTDGNDGKIRRNSEAYGIFGGYQITDNLAVEAGYEYFGRAKVK 88 Query: 106 LADNIHSLHGIGGSLRIRGG-YEVSDSLLLYATVGPDVAQK----YETGKAGEITPIAIG 160 +D H G+ G Y V D+L +Y G + + G A + + + Sbjct: 89 YSDGDQFRHTAHGTTLALKGSYPVLDNLDVYGRAGAALIRSDYKQVNDGVADKYHNLKVS 148 Query: 161 GTAGVGVEVGGLSESLVARLEYRA 184 GVE L E L R EY+ Sbjct: 149 PVFAAGVEYAILPE-LALRAEYQW 171 >gi|332534599|ref|ZP_08410432.1| putative TonB-dependent receptor protein with OmpA-like transmembrane domain [Pseudoalteromonas haloplanktis ANT/505] gi|332035949|gb|EGI72429.1| putative TonB-dependent receptor protein with OmpA-like transmembrane domain [Pseudoalteromonas haloplanktis ANT/505] Length = 189 Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Query: 98 DVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDV--AQKYETGKAGEI 154 ++ Y +I S I G SL R GY +++S +YA G A + G + Sbjct: 77 ELAYQNFDEVSDIDSKAEIDGVSLAARLGYPITESFSVYAKGGWLEWDADYTQDLPVGGV 136 Query: 155 TPIAIGGTA--GVGVEVGGLSESLVARLEY-RA 184 T GG A G G+E L+ ++ RLEY R Sbjct: 137 TASTDGGDAFYGAGIEY-ALTTNVQFRLEYERY 168 >gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3] gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3] Length = 318 Score = 41.6 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 54/172 (31%), Gaps = 30/172 (17%) Query: 56 PYAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEG--------DVR 100 Y G N + + G +AGY + +E D Sbjct: 23 AYVGAKLSVNHYQNACQSWAIDCDATDIAGGFYAGYQF---NKYFALEAAYLNLGKVDAI 79 Query: 101 YTVPVLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 Y + N GI S Y +S+ +A G Q G + Sbjct: 80 YPINEAEKNFTGSMQGIEISALAL--YPLSNDFNAFAKAGVFNWQAKSEGGPLTQKDYGL 137 Query: 160 GGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY------NTISLGVGMKF 205 T G+G+ +S+ ARLEY+ ++ + + SLG+ +F Sbjct: 138 SPTIGLGLSYQ-ISKQWQARLEYQY--FANIGSAEIGGANAHLSSLGISYQF 186 >gi|170744188|ref|YP_001772843.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46] gi|168198462|gb|ACA20409.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46] Length = 209 Score = 41.6 bits (96), Expect = 0.075, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 16/189 (8%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHD-FNGPYAGLSALYNG 66 V L A A G G +P+ A R ++G YA LS + Sbjct: 13 VAACLLLGGFLLRADLAAAQGVPPFAGFGALPSFAWPRPAGDEETRWSGSYAALSTGFAA 72 Query: 67 SFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRY------TVPVLADNIHSLHGIGG 118 + +AG ++ G ++ ++YGV G + + + G Sbjct: 73 VSSKHFGSSAGPTVGFEGGRMWQEGRLVYGVSGGFDFLSALGGGAAPGFGGLAYSRDLAG 132 Query: 119 SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI------AIGGTAGVGVEVGGL 172 L ++ G ++ +L+YA G + ++ A+ A VGVE + Sbjct: 133 GLEVKVGALLTPDVLVYAKAGAVAVHETLRVGPTAVSRSFAREDLAVRPEARVGVE-WAV 191 Query: 173 SESLVARLE 181 ++ L +E Sbjct: 192 TDRLSVAVE 200 >gi|254249287|ref|ZP_04942607.1| Opacity protein [Burkholderia cenocepacia PC184] gi|124875788|gb|EAY65778.1| Opacity protein [Burkholderia cenocepacia PC184] Length = 254 Score = 41.6 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 17/145 (11%) Query: 68 FGEEAHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 G + N GS+ GY + ++ + N + H + + Sbjct: 84 GGPDTGSNVTGSLGLGYQFGNGWRAEGEYVFKRTNNFTSYWAPFDANANEFH-VSAQRLM 142 Query: 123 RGGY---EVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGL 172 GY ++ +Y T+G VA Q +T + T + +AG GV + Sbjct: 143 LNGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRRFASKTQTNLAYSAGAGVSY-AI 201 Query: 173 SESLVARLEYRASKYSKVEGFYNTI 197 ++ L YR VE +NT Sbjct: 202 NKRFSIDLGYRYVDMGNVETGFNTF 226 >gi|332663467|ref|YP_004446255.1| hypothetical protein Halhy_1489 [Haliscomenobacter hydrossis DSM 1100] gi|332332281|gb|AEE49382.1| hypothetical protein Halhy_1489 [Haliscomenobacter hydrossis DSM 1100] Length = 165 Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 9/130 (6%) Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-IGGSLRIRGGYEVSDSLLLYAT 137 +FA + +G+ Y P N+ + +L + +D L +Y Sbjct: 40 GLFARGEFQIPNKDFGIVASANYYFPKEDKNLGVSQNRMALNLDGMYTFAGNDFLDIYGL 99 Query: 138 VGPDV--AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G +V A +G + + G G G+ L +L+ E R V G + Sbjct: 100 GGLNVLLASTKISGFDEKTSSTKFGFGVGGGIRY-KLESNLIPMAEMRY-----VNGGQD 153 Query: 196 TISLGVGMKF 205 + +G+ F Sbjct: 154 EFVINIGLLF 163 >gi|296284988|ref|ZP_06862986.1| putative outer membrane protein [Citromicrobium bathyomarinum JL354] Length = 206 Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 60/165 (36%), Gaps = 16/165 (9%) Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG 115 Y G+ +G+ + I AGY++ + GVEG+ + Sbjct: 43 GYEGVEVESSGNTVTADADSVVYGIAAGYDLSLGGVFVGVEGEYSASGSSTEFPDSFAGA 102 Query: 116 IGG-------SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT---PIAIGGTAGV 165 G L R G ++ ++ Y VG AG A G G Sbjct: 103 RDGLESDGQYYLGARAGVPITGAISAYGKVGYTALDTRSFTTAGSFADVEENATGFRFGG 162 Query: 166 GVEVGGLSESLVARLEYRASKY-----SKVEGFYNTISLGVGMKF 205 GV++ L L AR+EYR S+Y + N + GVG++F Sbjct: 163 GVQLD-LPGPLEARMEYRRSRYGDVGGDVGDVTTNQVVAGVGLRF 206 >gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 368 Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 63/217 (29%), Gaps = 64/217 (29%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M K LAV VS L ++ A A D + + YAG Sbjct: 1 MNKSILAVLVSGLLVSGAVQAAAQD-------------------------NTW---YAGG 32 Query: 61 SALYNGSF-----------------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103 A ++ F + G FAGY + + G E + Sbjct: 33 KAGWSKFFDVDQKQVVSDTLGALQNTSTSKDTLGLGAFAGYQLNPN---LGFEFGYDWFG 89 Query: 104 PVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYA--TVGPDVAQKYETGKAGEI 154 + S + G + + G+ V+D+L LY G + + Sbjct: 90 KYTSSGELSGVRVEGEAKSQMIQTTMKIGFPVNDALDLYGRIGGGYAWTNSELSAQTATD 149 Query: 155 TPIAIGGTAGV------GVEVGGLSESLVARLEYRAS 185 G G G E + ARLEY+ + Sbjct: 150 FIKDTGNKHGAVFVGALGAEY-AIDRDWAARLEYQYT 185 >gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida A449] Length = 368 Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 47/203 (23%) Query: 43 TNRYVPIRHDFNGPYAGLSALYNGSFGEE-----------------AHHNAGGSIFAGYN 85 + + + YAG A ++ F + + G FAGY Sbjct: 18 AVQAAAQDNTW---YAGGKAGWSKYFDVDQKQVVSDTLGALQNTGTSKDALGLGAFAGYQ 74 Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYA-- 136 + + G E + + S + G + + G+ V+D+L LY Sbjct: 75 LNPN---LGFEFGYDWLGKYTSSGELSGVRVEGEAKSQMIQATMKIGFPVNDALDLYGRI 131 Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGV------GVEVGGLSESLVARLEYRAS----- 185 G + + G G G E + ARLEY+ + Sbjct: 132 GGGYAWTDSELSARTATDFIKETGDKHGAVFVGALGAEY-AIDRDWAARLEYQYTTPLGD 190 Query: 186 ---KYSKVEGFYNTISLGVGMKF 205 S +E +S+G+ +F Sbjct: 191 ASLDRSGIEMDNGLLSVGMLYRF 213 >gi|78186190|ref|YP_374233.1| outer surface protein, putative [Chlorobium luteolum DSM 273] gi|78166092|gb|ABB23190.1| outer surface protein, putative [Chlorobium luteolum DSM 273] Length = 195 Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 14/138 (10%) Query: 56 PYAGLSALY------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLA 107 PYA S + F + +N G ++ + Y +EG++ Y + Sbjct: 34 PYATGSVGLAMLQDSDVEFAADRSYNTGYTLTGAVGLRSGE--YRLEGELGYQENGIESS 91 Query: 108 DNIHSLHGIGGSLRIRGGYEV-SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 + S+ G+ +E+ S S Y T G +A ++ G + G G Sbjct: 92 GDDVSILSFLGN--GYIDFEMASSSFTPYLTAGFGLASVDDSSGPGSVDDTVFAWQLGAG 149 Query: 167 VEVGGLSESLVARLEYRA 184 V +++++ + YR Sbjct: 150 VGYR-FADNMLVDVRYRY 166 >gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4] Length = 356 Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 57/191 (29%), Gaps = 20/191 (10%) Query: 32 HGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFG-------EEAHHNAGGSIFAGY 84 + G V T+ Y G A ++ G F GY Sbjct: 19 YLSLGAVYAAETDNSEAANEFDPYFYLGAKAGQMHYQNACESWSISCDGNDVGFGGFVGY 78 Query: 85 N-VEDSCIMYG----VEGDVRYT-VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138 + E Y+ V S+ G S R + +S+S L+A Sbjct: 79 QAWQYLGFETAYLDLGEAVAHYSESGVNNTYTGSMKGWEISAVTR--FSLSESFELFAKA 136 Query: 139 GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF----Y 194 G G + G GVE LS S VARLEY+ + Sbjct: 137 GSVYWDGDNRGPQSRNSDSDWAPMLGAGVEYQ-LSPSWVARLEYQYIDSLGSDLIGGSNG 195 Query: 195 NTISLGVGMKF 205 + +LG+ +F Sbjct: 196 HLTTLGISYRF 206 >gi|330830632|ref|YP_004393584.1| major outer membrane protein OmpAII [Aeromonas veronii B565] gi|328805768|gb|AEB50967.1| Major outer membrane protein OmpAII [Aeromonas veronii B565] Length = 345 Score = 41.2 bits (95), Expect = 0.097, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 26/154 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALY------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94 +T HD+ YAG+ + N + S+F GYN ++ G Sbjct: 15 ASTGAQAEPVHDW---YAGVGGGWAIAHNLNDFSQDVGKDATALSLFGGYNFTEN---LG 68 Query: 95 VEGDVRY----TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150 E + Y + + +S G S+ R +S+ L+A G + Sbjct: 69 AE--IGYLSTGDWDISGHDFNSK-GATLSVIGRL--PLSEMFSLFAEGGGYIYHVESVNG 123 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 + AG+GV L + + + YR Sbjct: 124 GDDNLAPL----AGLGV-TARLHDWVDLQARYRY 152 >gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906] gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906] Length = 368 Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 31/180 (17%) Query: 45 RYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104 +Y ++++G G G G FAGY G E + Sbjct: 44 QYQSTGNNWDGVNIGN--------GSTHKDQIGAGAFAGYQYNQ---YLGFELGYDWLGR 92 Query: 105 VLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------- 152 + ++ L + Y V D L +Y +G V + T Sbjct: 93 MAYKGSYNNGAFKAQGIQLTTKLSYPVMDDLDVYTRLGGMVWRADSTATINATSAGTQKR 152 Query: 153 -EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT------ISLGVGMKF 205 + +G E ++ ++ RLEY+ +G N +S+GV +F Sbjct: 153 FSENDTGVSPVFALGTEY-AITPNIATRLEYQWINNIGDKGTLNARPDNGMLSVGVAYRF 211 >gi|326387223|ref|ZP_08208833.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM 19370] gi|326208404|gb|EGD59211.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM 19370] Length = 241 Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 65/215 (30%), Gaps = 36/215 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K A+ + LA A A + + F G + Sbjct: 5 MKKFQAAMVCGGM-LAIATPAFAQSGYYFEDDEEQ-------IDEKTWPALGFGGGHIEA 56 Query: 61 SALYNGSFGEEAHH---------NAGGSIFAG---YNVE-DSCIMYGVEGDVRYTVPVLA 107 ++ G +A G + G Y+ + ++ G E DV + Sbjct: 57 IVGFDHMTGHSLKDIDSTANFFNSANGVAYGGGIGYDYTLNPTMVLGAEFDVTGSTADW- 115 Query: 108 DNIHSLHGIGGS---------LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEI---- 154 N + + L R G+ ++ L Y G Q TG+ Sbjct: 116 KNPNVSSTFNMTRMRVGRDIFLGGRFGFLLNPKNLFYVKAGFANTQFSITGENTGETLHY 175 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 + G G GV+ L++ A++EY S Y Sbjct: 176 DSNSSGLRFGFGVQ-HRLTKKTYAKIEYDYSHYGS 209 >gi|291086630|ref|ZP_06356308.2| outer membrane protein A [Citrobacter youngae ATCC 29220] gi|291067496|gb|EFE05605.1| outer membrane protein A [Citrobacter youngae ATCC 29220] Length = 341 Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 17/165 (10%) Query: 54 NGPYAGLSALYNGSFGEE------AHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLA 107 +G YAG + ++ + +++ G + GY + + +E + Sbjct: 31 DGLYAGANMGWSQYYNNNDFTRGHENNDIGVGGYIGYQL---NPYFSLENGILILGDAEG 87 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG-PDVAQKYETGKAGEITPIAIGGTAGVG 166 D S+ G L + Y VS++ + G + I +G Sbjct: 88 DKNSSMTVQGYQLSGKISYPVSNTDIYTRLGGMWYRSDYTRDDTNDSKVGTGIAPLISLG 147 Query: 167 VEVGGLSESLVARLEYRA-----SKYSKVEGFYNT-ISLGVGMKF 205 +E + ++ +R+EY+ + + N +S+G F Sbjct: 148 IEY-AWNYNITSRVEYQWVGNIKNDAATSANVDNGLLSVGFSYHF 191 >gi|187925819|ref|YP_001897461.1| hypothetical protein Bphyt_3849 [Burkholderia phytofirmans PsJN] gi|187717013|gb|ACD18237.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 173 Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 56/175 (32%), Gaps = 34/175 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGV 95 + +F GPY G N G + +H A AGYN + + G Sbjct: 22 AQSAAPQTGASEFAGPYVGFKLGVNTSDASGVVNKASHTTAFPGFTAGYNFDVDRFVAGA 81 Query: 96 E--GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE 153 E D+ + D G L + G + + Y +G Sbjct: 82 EVFADLHHGSTTYKD---------GGLDAKLGLPF-NQFMPYVRIGLTTDWPDIRPH--- 128 Query: 154 ITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 G+GVE ++ + A E+ + S +G N+ ++GV F Sbjct: 129 -------W--GLGVEY-KFAKHMSAVGEWT-TDTSNHDGTRRTNNSFTIGVQYHF 172 >gi|254511664|ref|ZP_05123731.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11] gi|221535375|gb|EEE38363.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11] Length = 172 Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 38/118 (32%), Gaps = 6/118 (5%) Query: 50 RHDFNGPYAGLSALYNGSFGEEAHHNAGGSI--FAGYNVEDSCIMYGVEGDVRYTVPVLA 107 D+ G Y G S Y G + GS GY+ + + G E + Y L Sbjct: 21 AEDWTGAYVGFSFGYADVDGSGGAGGSDGSFGPLIGYDYDFGNFVLGGE--LEYNRLNLD 78 Query: 108 -DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 L++RGGY+ L Y VG A + I + G Sbjct: 79 LGASEGSLDSMSRLKLRGGYDF-GPALGYVVVGTARASTSGNSDTAAVYGIGVAYPLG 135 >gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3] gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3] Length = 355 Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 50/182 (27%), Gaps = 29/182 (15%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYG 94 IA + + Y G + G ++ GYN I Sbjct: 12 IAASGFAAAPSISATTYVGAKVGMGWLDSACVDSVNCEDDSVAGGLYGGYNF-TDNIALE 70 Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYE 147 + D + + S+ R + ++ GP Y Sbjct: 71 LNADYLGDYDTSFNYNGTTQRYSDSIIAISLSPMYRL--AIKQEFDVFFKAGPA----YI 124 Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKV---EGFYNTISLGVGM 203 + +A+ G+G E ++ RLEY+ + N +++G+ Sbjct: 125 MHDDEDDVVLAL----GIGAE-KQFADDWAVRLEYQYFDDFDDKIIQNLNSNLVTVGLSY 179 Query: 204 KF 205 F Sbjct: 180 NF 181 >gi|297521813|ref|ZP_06940199.1| outer membrane protein A [Escherichia coli OP50] Length = 181 Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIM 92 + P + + Y G ++ G + G F GY V Sbjct: 16 ATVAQAAPKDNTW---YTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPY 69 Query: 93 YGVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 G E + Y + + + G+ L + GY ++D L +Y +G V + Sbjct: 70 VGFE--MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRA 125 Query: 146 YETGKA-GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 126 DTKSNVYGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 166 >gi|261756009|ref|ZP_05999718.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella suis bv. 3 str. 686] gi|261745762|gb|EEY33688.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella suis bv. 3 str. 686] Length = 66 Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 10/75 (13%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +G S +A+ + SA AAD + + + G Y G Sbjct: 2 TFKNLLGASLVAVITSTSAYAADAIVAQE----------PAPIAIAPSFSWAGAYFGGQV 51 Query: 63 LYNGSFGEEAHHNAG 77 Y + + G Sbjct: 52 GYGWGRAKLENRTNG 66 >gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36] gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36] Length = 327 Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 56/170 (32%), Gaps = 26/170 (15%) Query: 56 PYAGLSALYNGS-----FGEEA--HHNAGGSIFAGYNVEDSCIMYGVE------GDVRYT 102 Y G N + + G ++ GY + +E GD Sbjct: 27 FYLGAKLGVNHYQNGCQPWNVSCDKTDEAGGVYGGYQFNQ---YFALEAAYLHLGDAVAV 83 Query: 103 VPVLADN---IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI 159 PV N ++ G+ S ++D L+A G G I + Sbjct: 84 YPVNGLNQTYTGTMQGLELSALGLL--PITDRFSLFAKGGVYNWHATNDGPHQRIKESGL 141 Query: 160 GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVE---GFYNTISLGVGMKF 205 TAG+G+ LS S ARLEY+ + E +LG+ +F Sbjct: 142 SPTAGLGLSYQ-LSISWQARLEYQYFYELGNEEVGGSHGQLTTLGIAYQF 190 >gi|149377587|ref|ZP_01895326.1| OmpA domain protein transmembrane region-containing protein [Marinobacter algicola DG893] gi|149358129|gb|EDM46612.1| OmpA domain protein transmembrane region-containing protein [Marinobacter algicola DG893] Length = 192 Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 49/148 (33%), Gaps = 9/148 (6%) Query: 54 NGPYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112 +G Y S Y GE N + GY + +E + D++ Sbjct: 34 SGVYLSGSYGGYKSHGGEFDDENDLFGVGLGYQFNQ---FFALEAEYIDFGNFGDDDVDG 90 Query: 113 L-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G L R ++D+ +YA G + T + G GV+ Sbjct: 91 KLKGTSLGLMGRL--PLTDTFGVYAKAGAFASSFDVDAFDESETYDEVNPFVGAGVDFR- 147 Query: 172 LSESLVARLEY-RASKYSKVEGFYNTIS 198 ++E L A EY R + + F ++ Sbjct: 148 VTEQLTAFAEYNRYNVDIDEDDFNGQVT 175 >gi|88704778|ref|ZP_01102491.1| outer membrane protein A [Congregibacter litoralis KT71] gi|88701099|gb|EAQ98205.1| outer membrane protein A [Congregibacter litoralis KT71] Length = 184 Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 21/159 (13%) Query: 57 YAG-LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY----TVPVLADNIH 111 Y G + + + + F GY DS + + + Y D++ Sbjct: 34 YVGAGAYFTDVELSVGGEDDITPAGFIGYQFLDSN-VLMLSAEAGYYDLGAWSGTLDDVR 92 Query: 112 SLHGIGGSLRIRGGYEVSDSLL-LYATVGPDV----AQKYETGKAGEITPIAIGGTAGVG 166 Y +YA G ++ + + + T IG AGV Sbjct: 93 YSVDASALTVAGVAYVPLGPFFEVYAKAGFAAVEVKSRFADIPRTDDDTETFIG--AGVA 150 Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 ++ + ++Y + + N+ +GVG++F Sbjct: 151 LDFFDTVDI--------YAEYLQFDNTINSQMVGVGIRF 181 >gi|78221995|ref|YP_383742.1| OmpA/MotB [Geobacter metallireducens GS-15] gi|78193250|gb|ABB31017.1| OmpA/MotB [Geobacter metallireducens GS-15] Length = 457 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 31/184 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M++L LA G + ALA +A A G + P + + +H GP G+ Sbjct: 1 MKRL-LAAGCALFALAFATTAMA-----EVKPGSFAITPYVGGYTFDGEQHIKTGPTFGI 54 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 GYN +C G+EG YT + I L Sbjct: 55 R--------------------GGYNFTKNC---GLEGVFGYTPTEQTKRESDVDAITYRL 91 Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARL 180 + L+ + VG ++ AG + TAG G++ ++E+L R Sbjct: 92 EGLYHFMPEKDLVPFLAVG-GGGITIDSEGAGVKSRTDGIVTAGGGLKY-FINEALAVRT 149 Query: 181 EYRA 184 + R Sbjct: 150 DGRY 153 >gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320] gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320] Length = 362 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 31/180 (17%) Query: 45 RYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104 +Y ++++G G G G FAGY G E + Sbjct: 38 QYQSTGNNWDGVNIGN--------GSTHKDQIGAGAFAGYQYNQ---YLGFELGYDWLGR 86 Query: 105 VLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG--------- 152 + ++ L + Y V D L +Y +G V + T Sbjct: 87 MAYKGSYNNGAFKAQGIQLTTKLSYPVMDDLDVYTRLGGMVWRADSTATINATSAGTQKR 146 Query: 153 -EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT------ISLGVGMKF 205 + +G E ++ ++ RLEY+ +G N +S+GV +F Sbjct: 147 FSENDTGVSPVFALGTEY-AITPNIATRLEYQWINNIGDKGTLNARPDNGMLSVGVAYRF 205 >gi|78221563|ref|YP_383310.1| thrombospondin type 3 repeat-containing OmpA/MotB protein [Geobacter metallireducens GS-15] gi|78192818|gb|ABB30585.1| Thrombospondin type 3 repeat:OmpA/MotB [Geobacter metallireducens GS-15] Length = 447 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 46/140 (32%), Gaps = 6/140 (4%) Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126 + G + GYN ++ VEG YT + S + + + Sbjct: 43 DRDSDLKSRPTGGLRLGYNFTEN---VAVEGSGAYTDTKYDNGNGSSNVYRYGAELLYHF 99 Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 ++ + G + TAG GV+ L + + R + R + Sbjct: 100 IPQSRVVPFLAAGLGGITYEGREGVPDADRTDGILTAGGGVK-LFLVDRIALRADGR-NI 157 Query: 187 YSKVEGFYNT-ISLGVGMKF 205 ++ + + ++ G+ +F Sbjct: 158 FTFNDALNHQEVTAGLDFQF 177 >gi|170736597|ref|YP_001777857.1| porin opacity type [Burkholderia cenocepacia MC0-3] gi|169818785|gb|ACA93367.1| porin opacity type [Burkholderia cenocepacia MC0-3] Length = 238 Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 15/144 (10%) Query: 68 FGEEAHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL-- 120 G + N GS+ GY + ++ + N + H L Sbjct: 68 GGPDTGSNVTGSLGLGYQFGNGWRAEGEYVFKRTNNFTSYWAPFDANANEFHVSAQRLML 127 Query: 121 RIRGGYEVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 +++ +Y T+G VA Q +T + T + +AG GV ++ Sbjct: 128 NGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRRFASKTQTNLAYSAGAGVSY-AIN 186 Query: 174 ESLVARLEYRASKYSKVEGFYNTI 197 + L YR VE +NT Sbjct: 187 KRFSIDLGYRYVDMGNVETGFNTF 210 >gi|59712862|ref|YP_205638.1| hypothetical protein VF_2255 [Vibrio fischeri ES114] gi|59480963|gb|AAW86750.1| hypothetical protein VF_2255 [Vibrio fischeri ES114] Length = 206 Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 38/188 (20%) Query: 49 IRHDFNGPYAGL-----------SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG 97 + +G YAG+ S Y+ + ++ GY + G+EG Sbjct: 26 SQPKISGFYAGVGFGSFGYSEEDSWGYSNNPISAEADGNSTKVYLGYQF---NKIVGIEG 82 Query: 98 DV-RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156 Y +S+ SL GY + + + VG ++ + Sbjct: 83 TYTNYGEAKAKVGNYSMKPSSISLAANLGYTFKNGIRPFGLVGMSSLDLNQSEELLTDDS 142 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYR-----------ASKYSKVEGF--------YNTI 197 A G GVE + + +++R Y G +++ Sbjct: 143 GAA-FKFGFGVEY---TPKALGGVQFRAAYEMDMYAVEYLDYQSGSGLTTETNLYALDSL 198 Query: 198 SLGVGMKF 205 LG KF Sbjct: 199 YLGASYKF 206 >gi|118581048|ref|YP_902298.1| surface antigen msp4 family protein [Pelobacter propionicus DSM 2379] gi|118503758|gb|ABL00241.1| surface antigen msp4 family protein [Pelobacter propionicus DSM 2379] Length = 222 Score = 40.4 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 75/221 (33%), Gaps = 40/221 (18%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGS 67 + V++LA S A+P R + V T+ +R + YN Sbjct: 6 IIVAALATLLIPSLARAEPPRPGPYVSWFVGVTVPQDRNAHSYDSW--------GSYNDR 57 Query: 68 FGEEAHHNAGGSIFAGYNVE----DSCIMY-GVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 + + GGS AGY+ + + Y G E D Y A + H + GSL Sbjct: 58 VEFDPGIDVGGS--AGYDFGYVRLEGELSYKGAEIDSVYD----ATSDIRYHDLDGSLSA 111 Query: 123 -----RGGYEVSD--SLLLYATVGPDVAQKYETGKAG-----------EITPIAIGGTAG 164 +++ + + Y G A Y +G G Sbjct: 112 FAVMANCYFDLHNDTPVTPYLGGGIGFATLYLDDTSGVSNGVRWSLYDSDDDTVFAYQIG 171 Query: 165 VGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 G+++ ++ + YR ++ +G ++ + G MKF Sbjct: 172 AGIDIS-INRYFSLDVGYRY--FATDKGKFDEGNAGTRMKF 209 >gi|37676931|ref|NP_937327.1| hypothetical protein VVA1271 [Vibrio vulnificus YJ016] gi|320159022|ref|YP_004191400.1| membrane protein [Vibrio vulnificus MO6-24/O] gi|326424294|ref|NP_762742.2| outer membrane protein [Vibrio vulnificus CMCP6] gi|37201475|dbj|BAC97297.1| hypothetical protein [Vibrio vulnificus YJ016] gi|319934334|gb|ADV89197.1| membrane protein [Vibrio vulnificus MO6-24/O] gi|319999680|gb|AAO07732.2| Outer membrane protein [Vibrio vulnificus CMCP6] Length = 193 Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 11/123 (8%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGS----IFAGYNVEDSCIMYGVEGDVR-YTVPVLAD 108 NG Y G A +++ + AGY + G+E Y + Sbjct: 26 NGFYLGAGAGSTEFDSDQSVTGKADGNALKLIAGYQF---NRIVGIEAQYSKYGDVKFST 82 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGV 167 ++ SL GY ++ L Y VG E+ K + AI G+G+ Sbjct: 83 PQNTWTPTALSLNANLGYTFANGLRPYGIVGLSALDLSESTKTLESDSGAAIHF--GLGL 140 Query: 168 EVG 170 E Sbjct: 141 EYA 143 >gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida] Length = 348 Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 77/229 (33%), Gaps = 46/229 (20%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS-AL 63 A+ ++ +ALA AQAA YV + + + GL+ Sbjct: 3 KTAIALTIVALAVASVAQAA---------------PQPNTFYVGAKAGWASFHDGLNQIE 47 Query: 64 Y--NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-------HSLH 114 Y SFG + + G +F GY + D+ + D H+ H Sbjct: 48 YVSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAKHTNH 106 Query: 115 GIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGTAGVG 166 G SL+ Y + D L +YA VG + + A I + G Sbjct: 107 GTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPVFAGG 164 Query: 167 VEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 +E + E + V + EY +Y+ +++ G+ +F Sbjct: 165 LEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213 >gi|1332435|emb|CAA63037.1| outer membrane protein [Aeromonas salmonicida] gi|1588799|prf||2209353B major outer membrane protein OmpAII Length = 330 Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 57/174 (32%), Gaps = 47/174 (27%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-----NGSFGEE 71 +AQAAD D+ Y G+ A + FG++ Sbjct: 18 GTSTAQAAD--------------------------DW---YTGIGAGWAYGHDLNDFGKD 48 Query: 72 AHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130 A +A S+F GYN D Y E + Y A G S R ++D Sbjct: 49 ADKDATALSLFGGYNFND---YYAAE--LGYLYAGKAGVDFKTQGATLSGLARL--PLND 101 Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 ++A G G + T AG+G+ LS+ + + YR Sbjct: 102 IFSVFAEGGAYFNHVNGNGNSDNGTAPL----AGLGL-TAKLSDLIDVQARYRY 150 >gi|145298280|ref|YP_001141121.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851052|gb|ABO89373.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 333 Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 57/175 (32%), Gaps = 46/175 (26%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-----NGSFGEE 71 +AQAAD D+ Y G+ A + FG++ Sbjct: 18 GTSTAQAAD--------------------------DW---YTGIGAGWAYGHDLNDFGKD 48 Query: 72 AHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVS 129 A +A S+F GYN D Y E Y D + G S R ++ Sbjct: 49 ADKDATALSLFGGYNFND---YYAAELGYLYAGKAGVDGVDFKTQGATLSGLARL--PLN 103 Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 D ++A G G + T AGVG+ LS+ + + YR Sbjct: 104 DIFSVFAEGGAYFNHVNGNGNSDNGTAPL----AGVGL-TAKLSDLIDVQARYRY 153 >gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis] Length = 378 Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 58/231 (25%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K LA+ V + A A++ V Y G Sbjct: 7 MKKQTLALWVGLVLAGQASMALASNQVGE--------------------------FYVGG 40 Query: 61 SALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113 A + + G ++ GY D + +V Y + +S Sbjct: 41 KAGLTQFSDECGANSLDCEEQSEGFGVYGGYQALDWLAV-----EVGYDSLGKSKADYSA 95 Query: 114 -------HGIGGSLRI-----RGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIA 158 +++ + Y +++ L+A G V + G + Sbjct: 96 LMKPGEVAHYDATVQGIELGLKADYALTERAGLFAKAGTLLWQVEKSGSEPGLGSVNQEE 155 Query: 159 IGGTA--GVGVEVGGLSESLVARLEYRASKY--SKVEGFYNTISLGVGMKF 205 G + G GVE L+E RLEY+ + G + +GVG+ + Sbjct: 156 DGSSLMLGAGVEYR-LTEHWNTRLEYQYFNEVGGEKTGGSDIHFIGVGLDY 205 >gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044] gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 356 Score = 39.6 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 39/221 (17%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + ++ALA F + A P + G + ++ G Y Sbjct: 1 MKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLG---------WSQYHDTGFY---GNG 48 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHGI 116 + + G + G F GY V G E + Y + + G+ Sbjct: 49 FQNNNGPTRNDQLGAGAFGGYQV---NPYLGFE--MGYDWLGRMAYKGSVDNGAFKAQGV 103 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDV------AQKYETGKAGEITPIAIGGTAGVGVEVG 170 L + GY ++D L +Y +G V TG + + GVE Sbjct: 104 Q--LTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVE-W 160 Query: 171 GLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 ++ + RLEY+ V + +SLGV +F Sbjct: 161 AVTRDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF 201 >gi|254781078|ref|YP_003065491.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter asiaticus str. psy62] gi|254040755|gb|ACT57551.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter asiaticus str. psy62] Length = 242 Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 40/191 (20%) Query: 53 FNGPYAGLSAL--YNGSFGEEAHHNA--------GGSIFAGYNVEDSCIMYGVEGDVRYT 102 ++G Y GL Y + + G I G+N++ ++G+ Sbjct: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113 Query: 103 -VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA---QKYETGKAGEITPIA 158 + + I G + ++ GY V DSLL+Y G A + + A Sbjct: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172 Query: 159 IGG--------TAGVGVEVGGLSESLVARLEYRA--------------SKYSKVE--GFY 194 G G+G++ ++ + YR S +V+ G Sbjct: 173 KGRFDGHGSSVVLGIGLDY-MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231 Query: 195 NTISLGVGMKF 205 + SLG+ M F Sbjct: 232 HIASLGINMHF 242 >gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473] gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473] Length = 355 Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 37/218 (16%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++ALA F + AQAA Y + ++ + + Sbjct: 1 MKKTAIALAVALAGFATVAQAA---------------PKDNTWYTGGKLGWSQFHDVGTG 45 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG 118 + G G F GY + G E + Y P D ++ G Sbjct: 46 SDISNDGPTHKSQLGAGAFVGY---QANQYLGFE--MGYDWLGRMPYKGDTVNGAFKAQG 100 Query: 119 -SLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITP---IAIGGTAGVGVEVGG 171 L + Y ++ L LY +G + A VG+E Sbjct: 101 VQLAAKLSYPIAQDLDLYTRLGGMVWRADASVNEPSTNSHASAHDTGVSPLAAVGLEY-A 159 Query: 172 LSESLVARLEYRAS----KYSKVEGFYNTISLGVGMKF 205 ++++ RL+Y+ V + L VG+ + Sbjct: 160 VTKNWATRLDYQWVNNIGDRGTVGARPDNGMLSVGVSY 197 >gi|296104776|ref|YP_003614922.1| Opacity protein and surface antigens-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059235|gb|ADF63973.1| Opacity protein and surface antigens-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 227 Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 54/156 (34%), Gaps = 25/156 (16%) Query: 68 FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS-------- 119 G+E H G +I AGY + + EG+ YT + S Sbjct: 57 GGKEKEHFGGAAIAAGYQFGNG---WRTEGE--YTFKQKTEYTSGSSTFANSFNHLQTET 111 Query: 120 ----LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVE 168 L + YE+ + +Y T G V++ G G T + G GV Sbjct: 112 ERLMLNVYRDYELGYGVSVYGTAGLGVSKIKAGGWQGNAGREYASTTQSNLTYALGAGVS 171 Query: 169 VGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMK 204 + E L L YR K+E YN + G+K Sbjct: 172 YTPV-ERLYVDLGYRYIDMGKIESGYNNFTNARGLK 206 >gi|28900665|ref|NP_800320.1| hypothetical protein VPA0810 [Vibrio parahaemolyticus RIMD 2210633] gi|153836413|ref|ZP_01989080.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|260365540|ref|ZP_05778077.1| outer membrane protein [Vibrio parahaemolyticus K5030] gi|260877603|ref|ZP_05889958.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|260895384|ref|ZP_05903880.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|260901656|ref|ZP_05910051.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|28809045|dbj|BAC62153.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149750315|gb|EDM61060.1| outer membrane protein [Vibrio parahaemolyticus AQ3810] gi|308085254|gb|EFO34949.1| outer membrane protein [Vibrio parahaemolyticus Peru-466] gi|308090632|gb|EFO40327.1| outer membrane protein [Vibrio parahaemolyticus AN-5034] gi|308108921|gb|EFO46461.1| outer membrane protein [Vibrio parahaemolyticus AQ4037] gi|308114365|gb|EFO51905.1| outer membrane protein [Vibrio parahaemolyticus K5030] gi|328470603|gb|EGF41514.1| hypothetical protein VP10329_07382 [Vibrio parahaemolyticus 10329] Length = 191 Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 50 RHDFNGPYAGLSALYNGSFGEEA--------HHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 + D +G Y G + + +++ +F GY + +E Sbjct: 24 KKDVSGFYLGGGIGVTTVYDDSVWPYAVNLDSNDSTYKLFGGYQF---NRIVAIEAQYTR 80 Query: 102 TVPVLADNIHSLHGI----GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPI 157 + + + +L GY +ATVG + G + Sbjct: 81 YGDIFDKFEDAPRTMVKPENIALMANLGYTFDSGWRPFATVGLGRTEL----DFGSSSKA 136 Query: 158 AIGGTAGVGVEVG-GLSESLVARLEYRASKYSKVEGFYN------TISLGVGMKF 205 AGVG E E+L R+ Y + E + + ++ GV KF Sbjct: 137 ETSFRAGVGGEYSPKAIENLNFRIAYEVDTFVIDETYDDLTIMLGSLYAGVSYKF 191 >gi|161504592|ref|YP_001571704.1| adhesin/invasin PagN [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865939|gb|ABX22562.1| hypothetical protein SARI_02706 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 254 Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + A + + + Sbjct: 75 DRTKGVFGGGVAIGYDFNDQFQLPVRLELDTTFRGETDAKGGQDFTAFDDTVHMNVKNQV 134 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKAGEI----------TPIAIGGTA 163 R + G Y+ +S Y + G +A+ + A Sbjct: 135 RMSTYMVNGYYDFHNSTAFTPYISAGIGLARVKLKNNTMSEDFDINETLAASKNNFAWGA 194 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + +++++ Y+ KV N Sbjct: 195 GIGAKY-AVTDNIAIDASYKYINAGKVSISKN 225 >gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118] gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118] Length = 387 Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 31/158 (19%) Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVR----YTVPVLADNIHSLHGIGG-------- 118 + + ++G IF GY + + G D+ V + + G Sbjct: 69 DDNRSSGYKIFGGYQFNRNFAVEGGYFDLGNFGFNANTVPTGTLSGNIKLKGLNLDLVGT 128 Query: 119 -------SLRIRGGYEVSDSL-LLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 S+ R G +D+ T + + GVG++ Sbjct: 129 LPISEKFSVLGRIGVNYADAADSFAGTGAV-----NVLNPSPSKRETNL--KVGVGLQY- 180 Query: 171 GLSESLVARLE---YRASKYSKVEGFYNTISLGVGMKF 205 +++L R E YR + +G + +SLG+ +F Sbjct: 181 AFTDALAMRAEIERYRINDAVGNKGDIDLVSLGLIYRF 218 >gi|119468232|ref|ZP_01611358.1| putative outer membrane protein; signal peptide [Alteromonadales bacterium TW-7] gi|119448225|gb|EAW29489.1| putative outer membrane protein; signal peptide [Alteromonadales bacterium TW-7] Length = 351 Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 57/176 (32%), Gaps = 26/176 (14%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGE--------EAHHNAGGSIFAGYNVEDSCIM 92 AT+ G Y G Y + E + + + G + AGY Sbjct: 13 AATSVSTFAADKQEGFYIGAFGDYYDASWENMSAQAGLDVNESTGFGLEAGYRF-SDFWS 71 Query: 93 YGVE-GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151 +E D+ + A + I GS R G + L + GP Sbjct: 72 ARLEYADLDFNAFDKAAGNRNN--IDGS---RFGID----ALYHLDGGPFYGLVGIKSMD 122 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI--SLGVGMKF 205 + AGVG ++++L A +E + Y ++ Y + LG+ F Sbjct: 123 VVDDNTFL--NAGVGY-RHFITDNLFANVE--TAVYQGIDKGYTDVGAKLGINYFF 173 >gi|295837733|ref|ZP_06824666.1| phosphoprotein phosphatase [Streptomyces sp. SPB74] gi|197699932|gb|EDY46865.1| phosphoprotein phosphatase [Streptomyces sp. SPB74] Length = 514 Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 8/82 (9%) Query: 23 AADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-----GPYAGLSALYN-GSFGEEAHHNA 76 AA R+A G A Y P D++ GP G G + A Sbjct: 280 AAGLGRQAPAPGGHGSGNGAAPAYAP--EDWDEDGDYGPRRGGRRWLKRGLWTVVALAVI 337 Query: 77 GGSIFAGYNVEDSCIMYGVEGD 98 GG ++ GY + GVE D Sbjct: 338 GGGLYGGYRWTQNQYYVGVEDD 359 >gi|145220337|ref|YP_001131046.1| porin, opacity type [Prosthecochloris vibrioformis DSM 265] gi|145206501|gb|ABP37544.1| porin, opacity type [Chlorobium phaeovibrioides DSM 265] Length = 189 Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 19/165 (11%) Query: 57 YAGLSALYNG-----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPVLAD 108 Y +A G +A +AG ++F + EG++ Y V + Sbjct: 28 YVSGNAGITWMNDVDYAGHKAEMDAGFALFGAIGCDYGDTRL--EGELGYMQNDVDKVDG 85 Query: 109 NIHSLHGIGGSLRIRGGYEVS--DSLLLYATVGP--DVAQKYETGKAGEITPIAIGGTAG 164 S SL G Y++ + Y T G + G + G Sbjct: 86 ASASGDISVISLMANGYYDIDTGGGIEPYITAGVGFAQGHAEDVTNFGTWNETTLAWQVG 145 Query: 165 VGVEVGGLSESLVARLEYRASK----YSKVEGFYNTISLGVGMKF 205 GV + +++ L YR N + +G+ + F Sbjct: 146 AGV-AVPVGNNVMVDLRYRYFDTTDMLDDTNIGSNNLLVGMRVGF 189 >gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678] Length = 365 Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 71/223 (31%), Gaps = 29/223 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +++ LA L+L + AA + + T +P + + G G+ Sbjct: 7 LRQTHLAKQFILLSLLCYGVTHAA---EQQNPAQLIDEDKPQTLITLPEAYLYMGSEIGI 63 Query: 61 SALYNGSFG---EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-- 115 + +G + ++ S FAGY +V Y A+ + Sbjct: 64 NHYQHGCESWSIDCDKNSTMASFFAGYQFNHHLAF-----EVAYIDLGKAEATYLEASKQ 118 Query: 116 --IGGSLRIR-----GGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 GS+R + L L+A G G I + GVG+ Sbjct: 119 NIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDWSPSFGVGMT 178 Query: 169 VGGLSESLVARLEYRA------SKYSKVEGFYNTISLGVGMKF 205 LS+S ARL+Y + SLG+ +F Sbjct: 179 YQ-LSDSWQARLQYEYFHHLGNDDIGGTNA--HATSLGISYQF 218 >gi|153834458|ref|ZP_01987125.1| outer membrane protein OmpA [Vibrio harveyi HY01] gi|148869154|gb|EDL68186.1| outer membrane protein OmpA [Vibrio harveyi HY01] Length = 318 Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 21/158 (13%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + + F GY + D + VE + Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDGSTLGAFVGYEMND---YFSVEAGFD-NLGDFDQTS 78 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 H +L + +++ + LY VG Y G+ +G GVE Sbjct: 79 FGGHVEAITLAPKFSLPITEDIALYGKVGGA----YLMMNDGKDDYSYLG---AAGVEFN 131 Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 +SE++ AR EY+ + S V+ N+ +LGV KF Sbjct: 132 -VSENVTARAEYQTITDISNDSVKAMGNSATLGVAFKF 168 >gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195] gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195] Length = 369 Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 71/223 (31%), Gaps = 29/223 (13%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 +++ LA L+L + AA + + T +P + + G G+ Sbjct: 11 LRQTHLAKQFILLSLLCYGVTHAA---EQQNPAQLIDEDKPQTLITLPEAYLYMGSEIGI 67 Query: 61 SALYNGSFG---EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG-- 115 + +G + ++ S FAGY +V Y A+ + Sbjct: 68 NHYQHGCESWSIDCDKNSTMASFFAGYQFNHHLAF-----EVAYIDLGKAEATYLEASKQ 122 Query: 116 --IGGSLRIR-----GGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 GS+R + L L+A G G I + GVG+ Sbjct: 123 NIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDWSPSFGVGMT 182 Query: 169 VGGLSESLVARLEYRA------SKYSKVEGFYNTISLGVGMKF 205 LS+S ARL+Y + SLG+ +F Sbjct: 183 YQ-LSDSWQARLQYEYFHHLGNDDIGGTNA--HATSLGISYQF 222 >gi|161615525|ref|YP_001589490.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161364889|gb|ABX68657.1| hypothetical protein SPAB_03297 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 239 Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GYN D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYNFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y +VG +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISVGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|254497374|ref|ZP_05110177.1| hypothetical protein LDG_1620 [Legionella drancourtii LLAP12] gi|254353427|gb|EET12159.1| hypothetical protein LDG_1620 [Legionella drancourtii LLAP12] Length = 247 Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 61/185 (32%), Gaps = 35/185 (18%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHH------------------NAGGSIFA 82 IAT + F+G Y G + G+ ++ H GS+FA Sbjct: 26 IATVLPLLATPCFSGLYVGSAVGPEGASFTQSAHVMRPGSFNVVDRAHFAGLGVFGSLFA 85 Query: 83 GYNVEDSCIMYGVEGDVR------------YTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130 GY+ + E + Y A +L G + + G+ +SD Sbjct: 86 GYSRVYNRYYLAAEVNANISSLTYKLINDEYVHQTFAKTTFTLKNSEG-VSLLPGFFLSD 144 Query: 131 SLLLYATVGPDVAQKYETGKAG---EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 + L Y VG + + +T G G GV L+E ++Y Y Sbjct: 145 NTLFYGRVGYINGRLKISESDPTIRSMTKNRNGIRYGAGVRHD-LTEQWTVMMDYSQINY 203 Query: 188 SKVEG 192 +V+ Sbjct: 204 DRVKN 208 >gi|302326357|gb|ADL25558.1| P2 domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 398 Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 14/125 (11%) Query: 56 PYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH-SL 113 + G S + G ++ + G + G N + + + + + + +D +H S Sbjct: 230 FFLGGSYVAFLGDISDKVKNGFG--FYGGTNWYWNNVSFEGQINAHFNDVRSSDTLHFSN 287 Query: 114 HGIGGSLRIRGGYEVSD-SLLLYATVGPDVA-QKYETGKAGEITPIAIGGTA----GVGV 167 G + GY D SLL Y T G + + G G+ Sbjct: 288 LGWN----LNVGYYFRDISLLCYLTTGVEADFYGENKSNDDKNRSSMDSYQVYPVYGAGI 343 Query: 168 EVGGL 172 Sbjct: 344 LYDMF 348 >gi|186477368|ref|YP_001858838.1| OmpA domain-containing protein [Burkholderia phymatum STM815] gi|184193827|gb|ACC71792.1| OmpA domain protein transmembrane region-containing protein [Burkholderia phymatum STM815] Length = 170 Score = 39.2 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 30/162 (18%) Query: 52 DFNGPYAGLSALYN-----GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE--GDVRYTVP 104 DF+GPY G N G+ + H + AGY ++ G E D+ + Sbjct: 30 DFSGPYVGAKLGVNVSSASGATNKPTHSTIFPGLVAGYGFNAGPVVLGAELFADLHHGSA 89 Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAG 164 D G + + GY + SL+ YA +G A G Sbjct: 90 TFKD---------GGIDAKIGYPI-GSLMPYARLGVTT------------DWPASRFNYG 127 Query: 165 VGVEVGGLSE-SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 +GVE + SL + + ++ N+ ++G +F Sbjct: 128 LGVEYMVMKNLSLFSEWTHDSTDADNTHWRNNSFTIGASYRF 169 >gi|290473783|ref|YP_003466657.1| Attachment invasion locus [Xenorhabdus bovienii SS-2004] gi|289173090|emb|CBJ79863.1| Attachment invasion locus [Xenorhabdus bovienii SS-2004] Length = 186 Score = 39.2 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 10/118 (8%) Query: 93 YGVEGDVRYTVPVLA----DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET 148 GV G + YT+ N+ SL Y +D + Y +G + Sbjct: 74 LGVVGSLTYTLNRFENDHVGNVTKFKSDSYSLLAGPSYRFNDYISAYGMIGAAHNKIKIQ 133 Query: 149 GKAG-EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + +I+ ++ G G++ + E++ Y+ SK+S ++ T LG+G +F Sbjct: 134 DDSEFDISKTSLAY--GAGLQFNPI-ENIAVDASYQYSKFSDIKVG--TWVLGIGYRF 186 >gi|255073905|ref|XP_002500627.1| predicted protein [Micromonas sp. RCC299] gi|226515890|gb|ACO61885.1| predicted protein [Micromonas sp. RCC299] Length = 819 Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 35/137 (25%), Gaps = 21/137 (15%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGY 84 D V R P + Y+ + + G + G GY Sbjct: 322 DDVDSQD-SNREDAPDADYPEDE------SDSYSEGDSREDWVGGSD-DDGFGSRHRGGY 373 Query: 85 NVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 N D GVEGD + + G + GY + + G D + Sbjct: 374 NWVDG----GVEGD-------YSGDDDVYDEFHGGIERHSGY--REGSMSAKKPGWDGST 420 Query: 145 KYETGKAGEITPIAIGG 161 K G + Sbjct: 421 KILEASTGTEAGSTLAW 437 >gi|261417485|ref|YP_003251168.1| hypothetical protein Fisuc_3106 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373941|gb|ACX76686.1| hypothetical protein Fisuc_3106 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 365 Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 39/125 (31%), Gaps = 14/125 (11%) Query: 56 PYAGLS-ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH-SL 113 + G S + G ++ + G + G N + + + + + + +D +H S Sbjct: 197 FFLGGSYVAFLGDISDKVKNGFG--FYGGTNWYWNNVSFEGQINAHFNDVRSSDTLHFSN 254 Query: 114 HGIGGSLRIRGGYEVSD-SLLLYATVGPDVA-QKYETGKAGEITPIAIGGTA----GVGV 167 G + GY D SLL Y T G + + G G+ Sbjct: 255 LGWN----LNVGYYFRDISLLCYLTTGVEADFYGENKSNDDKNRSSMDSYQVYPVYGAGI 310 Query: 168 EVGGL 172 Sbjct: 311 LYDMF 315 >gi|148475218|dbj|BAF63175.1| major outer membrane protein ompAII [Aeromonas veronii] Length = 332 Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 46/135 (34%), Gaps = 17/135 (12%) Query: 57 YAGLSALY-----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G+ A + FG++ +A S+F GYN D Y E Y D Sbjct: 28 YTGVGAGWAYAHGLDDFGKDTDKDATALSLFGGYNFND---YYAAELGYLYAGKAGIDGA 84 Query: 111 HSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 G S R + D ++A G G + T AG+G+ Sbjct: 85 DFKTQGATLSGIARL--PLGDIFSVFAEGGAYFNHANGNGNSDNGTAPL----AGLGL-T 137 Query: 170 GGLSESLVARLEYRA 184 LS+ + + YR Sbjct: 138 AKLSDLIDVQARYRY 152 >gi|198275878|ref|ZP_03208409.1| hypothetical protein BACPLE_02053 [Bacteroides plebeius DSM 17135] gi|198271507|gb|EDY95777.1| hypothetical protein BACPLE_02053 [Bacteroides plebeius DSM 17135] Length = 1004 Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 16/97 (16%) Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLL---------LYATVGP---DVAQKYETG 149 + ++ ++ + L+ R GY VS + L +Y + G Y Sbjct: 606 SWRIIEEDFMKEQDVFDDLKFRVGYGVSGNSLGFDAFYSRQVYGSTGWFTSADGDNYRVL 665 Query: 150 KAGEITPIAIGG--TA--GVGVEVGGLSESLVARLEY 182 A + TA VG++ G + L +EY Sbjct: 666 GATRNANPDLKWEKTAMLNVGLDFGFFNNRLSGTVEY 702 >gi|154707620|ref|YP_001423811.1| heat resistant agglutinin [Coxiella burnetii Dugway 5J108-111] gi|154356906|gb|ABS78368.1| heat resistant agglutinin [Coxiella burnetii Dugway 5J108-111] Length = 181 Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 59/177 (33%), Gaps = 16/177 (9%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96 +P I V +GPY GL + + GY + + I E Sbjct: 13 AIPPIYAGGAVDTPFLNSGPYVGLHGGVALPSESDLNAGPVVGAQVGYRMGNVRI----E 68 Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVS--DSLLLYATVG------PDVAQKYET 148 G + Y L N + + +L G Y+ + L+ + VG Sbjct: 69 GALSYYSNSLEANSDAKLRMT-TLMANGYYDFNFNAPLVPFVGVGVGWVHAWRTNNGVLL 127 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + + A G AGV +S + ++YR ++ G N I + V +F Sbjct: 128 NRGTDNNEFAYQGIAGV---SFRVSPRVTLGVDYRYLGWTDGNGSQNLIEMSVNYQF 181 >gi|4140005|pdb|1BXW|A Chain A, Outer Membrane Protein A (Ompa) Transmembrane Domain Length = 172 Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 27/156 (17%) Query: 47 VPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 P + + Y G ++ G + G F GY V G E Sbjct: 2 APKDNTW---YTGAKLGWSQYHDTGLINNNGPTHENKLGAGAFGGYQV---NPYVGFE-- 53 Query: 99 VRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-TGK 150 + Y + + + G+ L + GY ++D L +Y +G V + + Sbjct: 54 MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTYSNV 111 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 112 YGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 146 >gi|331084766|ref|ZP_08333854.1| hypothetical protein HMPREF0987_00157 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410860|gb|EGG90282.1| hypothetical protein HMPREF0987_00157 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 702 Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 10/77 (12%) Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG-------YNVEDSCIMYGVEGDV 99 +P+ +D+ P +GL Y+ A + A G G Y ++ ++YG E DV Sbjct: 122 IPLIYDWRAPVSGLFYDYDKGP---ASYEAPGGTMEGTIEAKWQYKIQAGKMIYGFESDV 178 Query: 100 RYTVPVLADNIHSLHGI 116 + +L + + Sbjct: 179 KIDDDILKKELGQNGDV 195 >gi|331678985|ref|ZP_08379657.1| adhesin/virulence factor Hek [Escherichia coli H591] gi|331073050|gb|EGI44373.1| adhesin/virulence factor Hek [Escherichia coli H591] Length = 245 Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 46/229 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGP 56 M ++ + VS+LA+A SAQA AD + + ++ + R++ ++ Sbjct: 1 MIEMKKVIAVSALAVAGMFSAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADR 60 Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VP 104 Y G G++ G I AGY+ + + D +Y Sbjct: 61 YKG---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDD 111 Query: 105 VLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------- 151 D++ S + +L + Y+ + + + G A+ ++ Sbjct: 112 WSHDDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYS 170 Query: 152 ------GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + + G GV ++ + L YR Y Sbjct: 171 GRESLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSY 218 >gi|319638393|ref|ZP_07993155.1| surface protein A [Neisseria mucosa C102] gi|317400142|gb|EFV80801.1| surface protein A [Neisseria mucosa C102] Length = 179 Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 23/165 (13%) Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLH 114 G Y A + G+ + I AGY+ D + V D YT + Sbjct: 24 GFYVQADAGHATVKGDASVKGFSPRISAGYDFGD----FRVAAD--YTHYKSEKINTASF 77 Query: 115 GIGG-----SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG------EITPIAIGGTA 163 G + +++ + Y + K T +G A Sbjct: 78 DAEGKYHSAGVSAIYDFDLQTPVKPYVGARVAINHASAKVKTANSYYERSDTKTGVGAMA 137 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 GV E ++ ++ YR + + K+ + +S GV + F Sbjct: 138 GVSYE---VTPNVALDAGYRYNYWGKMNSIKFHTHEVSAGVRVTF 179 >gi|238764928|ref|ZP_04625867.1| Attachment invasion locus protein [Yersinia kristensenii ATCC 33638] gi|238696869|gb|EEP89647.1| Attachment invasion locus protein [Yersinia kristensenii ATCC 33638] Length = 225 Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 60/170 (35%), Gaps = 13/170 (7%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR 100 ++ N Y + YA NG ++ H I Y E + +G+ Sbjct: 64 VSVNVYAVGESSISLGYAQSHVKANGHSLDKDHK----GINVKYRYEVNND-WGMISSFT 118 Query: 101 YT---VPVLADNIHSLHGIGGSLRIRGG--YEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 YT N G + G + +++ + LY +G + + ++ Sbjct: 119 YTDLDHDSYQGNTKIGEGDSRYYSLTTGPIFRINEYVSLYGLMGVAHGKVKFSTPDESVS 178 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 TAG GV+ ++V Y SK + V+ T LGVG +F Sbjct: 179 ASKTSMTAGTGVQFNPY-PNVVFDASYEYSKLNDVKVG--TWILGVGYRF 225 >gi|84385444|ref|ZP_00988475.1| hypothetical protein V12B01_24959 [Vibrio splendidus 12B01] gi|84379424|gb|EAP96276.1| hypothetical protein V12B01_24959 [Vibrio splendidus 12B01] Length = 199 Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 9/159 (5%) Query: 55 GPYAGLSALYNGSFGEEAHH--NAGGSIFAGYNVEDSCIM-YGVEGDVRYTVPVLADNIH 111 G Y Y GS E++ + ++ GY ++ G+E + R V ++ Sbjct: 42 GFYNETELEYRGSAIEDSSDLSDFSYNLVGGYEFNTHDVVKLGLEAEHRKIGKVSYSDLM 101 Query: 112 SLHGIGGSLRIRGGYEVSDSLL-LYAT--VGPDVAQKYETGKAGEITPIAIGGTAGVGVE 168 + G + I+ + V +L LY + G + G + Sbjct: 102 DIEGQAFFVNIKPKFIVQGDVLDLYVSLLAGVGSMDMEAKAFGVSGSKSEAAYQVGAELG 161 Query: 169 VGGLSESLVARLEYRAS--KYSKVEGFYNTISLGVGMKF 205 +++++ + YR + + ++ T LG F Sbjct: 162 AI-VTDNIDIHIGYRYANVEIESIDVSPQTAYLGARYHF 199 >gi|121997311|ref|YP_001002098.1| hypothetical protein Hhal_0509 [Halorhodospira halophila SL1] gi|121588716|gb|ABM61296.1| hypothetical protein Hhal_0509 [Halorhodospira halophila SL1] Length = 243 Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 84/249 (33%), Gaps = 54/249 (21%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG- 59 M++ + V ++ LA+ A T +R +P F GPY G Sbjct: 1 MRRPGIGVRRGAITLAAVAGIVAPSLASAQFGQQNT---TGFFDRTLP----FEGPYFGI 53 Query: 60 ----------LSALYNGSFGEEAHHNAG--------------GSIFAGYNVEDSCIMYGV 95 + +G ++ + G G +F G ++ + YG Sbjct: 54 HAAATLPSVAMEVGASGFDVDDVSFDEGDATLSFSTDAVGARGELFVGAGLQSQSLYYGA 113 Query: 96 EGDVRYTVPVLADNIHSL--------HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE 147 E + + D + + G G S+R+ GG + +LY + V Sbjct: 114 EINYALGHAMADDALEAAEGLTAQVSDGYGLSVRL-GGVLEEGTSMLYGRLSYQVRNLEV 172 Query: 148 TGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLE---YRASK---YSK---VEGFY 194 ++G +G GVG+E ++ R+E Y+ +S VE Sbjct: 173 QAESGGDQASDDTTFVGIGVGVGLEYRSTQLPVMMRVEGNLYQYGDEDLFSGAHEVEFTE 232 Query: 195 NTISLGVGM 203 ++LGVG Sbjct: 233 AAMNLGVGY 241 >gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222] gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222] Length = 353 Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 29/182 (15%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYG 94 +A + Y G + + G ++ GYN Sbjct: 12 VAASGLAAAPSIAATTYVGAKVGMGWLDSACVDGVKCEDDSVAGGLYGGYNF-SDKFALE 70 Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQKYE 147 + D ++ +L S+ R + ++ GP Y Sbjct: 71 LSADYLGDYDTSFNSTGTLKQYSDSIVAISLSPMYRL--AIQQKFDIFFKAGPA----YI 124 Query: 148 TGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKV---EGFYNTISLGVGM 203 + +++ G+G E +E R+EY+ + + N +++G+ Sbjct: 125 MHDDEDDVVLSL----GIGAE-KQFAEDWALRVEYQYFDDFDDKFVQDLNSNLVTVGLSY 179 Query: 204 KF 205 F Sbjct: 180 NF 181 >gi|206562099|ref|YP_002232862.1| opacity family porin protein [Burkholderia cenocepacia J2315] gi|198038139|emb|CAR54089.1| opacity family porin protein [Burkholderia cenocepacia J2315] Length = 238 Score = 38.9 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 15/144 (10%) Query: 68 FGEEAHHNAGGSIFAGYNV-----EDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL-- 120 G E N GS+ GY + ++ + N + H L Sbjct: 68 GGPETGSNVTGSLGLGYQFGNGWRAEGEYVFKRTNNFTSYWAPFDANANEFHVSAQRLML 127 Query: 121 RIRGGYEVSDSLLLYATVGPDVA-------QKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 +++ +Y T+G VA Q +T + T + +AG GV ++ Sbjct: 128 NGYKDFDLGRGFSVYGTLGIGVAIVSADGWQTNDTRRFASKTQTNLAYSAGAGVSY-AIN 186 Query: 174 ESLVARLEYRASKYSKVEGFYNTI 197 + L YR +E +NT Sbjct: 187 KRFSIDLGYRYVDMGNIETGFNTF 210 >gi|156973571|ref|YP_001444478.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116] gi|156525165|gb|ABU70251.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116] Length = 318 Score = 38.9 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 21/158 (13%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + + F GY + D + VE + Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDGSTLGAFVGYEMND---YFSVEAGFD-NLGDFDQTS 78 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 H +L + +++ + LY VG Y G+ +G G+E Sbjct: 79 FGGHVEAITLAPKFSLPITEDIALYGKVGGA----YLMMNDGKDDYSYLG---AAGLEFN 131 Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 +SE++ AR EY+ + S V+ N+ +LGV KF Sbjct: 132 -VSENVTARAEYQTITDISNDSVKAMGNSATLGVAFKF 168 >gi|241761570|ref|ZP_04759657.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373878|gb|EER63411.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 204 Score = 38.9 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 72/228 (31%), Gaps = 48/228 (21%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ A V++ A+A+ AQ PT F G Sbjct: 1 MRKIIFAAAVATAAIAAQAPAQ------------VINTPT-----------TFRGFRIEG 37 Query: 61 SALYNGSFGEEAHHNAGG-SIFAGYNVEDSC-IMYGVEGDVRYTVPVLADNIHSLHGIGG 118 ++ + N G AG + + + G EG + DN + G Sbjct: 38 DIGWDRARANGVGQNNMGYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATNG 97 Query: 119 S-------------LRIRGGYEVSDSLLLYATVGPDVAQ--------KYETGKAGEITPI 157 + IR G+ +LLYA G + Sbjct: 98 NGGSVSTKAFQEWDASIRMGFLAQPDILLYAVGGYATTRERTLYTGVGGTGVGGYRNVGW 157 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + G + G GVE +S+ +YR S++S +LG G++F Sbjct: 158 SDGYSVGGGVEYS-ISKMFFMNAQYRYSQFSNHTS-RQRATLGFGVRF 203 >gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II; Flags: Precursor gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae] Length = 344 Score = 38.9 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 60/191 (31%), Gaps = 43/191 (22%) Query: 47 VPIRHDFNGPYAGLSALYNGSF-------------GEEAHHNAGGSIFAGYNVEDSCIMY 93 P + + YAG ++ G + G F GY V Sbjct: 10 APKDNTW---YAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGYQV---NPYL 63 Query: 94 GVEGDVRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV---- 142 G E + Y + + G+ L + GY ++D L +Y +G V Sbjct: 64 GFE--MGYDWLGRMAYKGSVDNGAFKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRAD 119 Query: 143 --AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT 196 TG + + GVE ++ + RLEY+ V + Sbjct: 120 SKGNYASTGVSRSEHDTGVSPVFAGGVE-WAVTRDIATRLEYQWVNNIGDAGTVGTRPDN 178 Query: 197 --ISLGVGMKF 205 +SLGV +F Sbjct: 179 GMLSLGVSYRF 189 >gi|9256903|pdb|1QJP|A Chain A, High Resolution Structure Of The Outer Membrane Protein A (Ompa) Transmembrane Domain Length = 171 Score = 38.9 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 27/156 (17%) Query: 47 VPIRHDFNGPYAGLSALYNGSF--------GEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 P + + Y G ++ G + G F GY V G E Sbjct: 1 APKDNTW---YTGAKLGWSQYHDTGLINNNGPTHENKLGAGAFGGYQV---NPYVGFE-- 52 Query: 99 VRYTV-------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-TGK 150 + Y + + + G+ L + GY ++D L +Y +G V + + Sbjct: 53 MGYDWLGRMPYKGSVENGAYKAQGVQ--LTAKLGYPITDDLDIYTRLGGMVWRADTYSNV 110 Query: 151 AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASK 186 G+ + GVE ++ + RLEY+ + Sbjct: 111 YGKNHDTGVSPVFAGGVEY-AITPEIATRLEYQWTN 145 >gi|148266343|ref|YP_001233049.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4] gi|146399843|gb|ABQ28476.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4] Length = 454 Score = 38.9 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 61/211 (28%), Gaps = 40/211 (18%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ + V +A AA + G+ Sbjct: 1 MKKISCYLMVLLFLFVIASTAAAAGIQPDSFTLS------------------------GI 36 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY---TVPVLADNIHSLHGIG 117 Y+ + I GYN GVE Y +++ G Sbjct: 37 VGGYSFDGKQHLETRPVVGIRGGYNFTK---YVGVEALFDYVRTEGTRAGLGDANVYRYG 93 Query: 118 GSLRIRGGYEVSDS-LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 G + + + DS L+ Y G + GVG++ L+++L Sbjct: 94 GDV---LLHILPDSDLVPYLAAGY-GGLTLDRENQKTNNHGVFDY--GVGLKY-FLTDNL 146 Query: 177 VARLEYRASKY--SKVEGFYNTISLGVGMKF 205 R ++R + S + + GV +F Sbjct: 147 ALRGDFRHLVFRDSGETLYNYEYTAGVAYQF 177 >gi|330446560|ref|ZP_08310212.1| ompA-like transmembrane domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490751|dbj|GAA04709.1| ompA-like transmembrane domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 203 Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 59/192 (30%), Gaps = 33/192 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH----------HNAGGS----IFAGYNV 86 + + + G Y G + N GG+ I AGY Sbjct: 18 AVASENTTNSNKYQGFYVGAGVGTTDFHDDRESFLKNNHTVGYSNDGGAESYKIIAGY-- 75 Query: 87 EDSCIM-----YGVEGDVRYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGP 140 + + I+ Y GDV+YT+ SL GY + L +ATVG Sbjct: 76 QFNRIVSLEAQYTAYGDVKYTLETNGIKATGKTKHESFSLAANLGYTFDNGLRPFATVG- 134 Query: 141 DVAQKYETGKAGEITPIAIGGTAGVGVEVG-GLSESLVARLEYR---ASKYSKVEGFYNT 196 Q + I G G+E L R Y + + V+ F + Sbjct: 135 -FGQISLKDSMIKDDGGLI--RLGAGLEYQVKQVPGLGIRAAYEADFYTLETAVKDFDQS 191 Query: 197 I---SLGVGMKF 205 + LG KF Sbjct: 192 VGSWYLGTTYKF 203 >gi|251793586|ref|YP_003008315.1| outer membrane protein 18/16 [Aggregatibacter aphrophilus NJ8700] gi|247534982|gb|ACS98228.1| outer membrane protein 18/16 [Aggregatibacter aphrophilus NJ8700] Length = 185 Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 17/179 (9%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV-EGD 98 + DF G G+ ++A + + A Y ++ G+ EG Sbjct: 11 AAVLVSTSAVASDFTGFGVGVDVGTTKY--KDAKRISNVDLIADYGIDYGNNFVGIIEGK 68 Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGG------YEVSDSLLLYATVGPDVAQKYET---- 148 ++ L D+ + + R R G Y V+ ++L YA +G A+ Sbjct: 69 LKLNNSTLRDH-YGYSHLKIKERTRLGVSYLQGYRVTPNILPYAKIGVQTAKFKAEYREP 127 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY--RASKYSKVEGFYNTISLGVGMKF 205 G + + G G GV+ L+ + LEY +K+ + NT S +F Sbjct: 128 GYSSTSSETKNGIGFGAGVKAS-LTPNFELGLEYLRSHTKFDGYKLKGNTFSTNATYRF 185 >gi|170727714|ref|YP_001761740.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908] gi|169813061|gb|ACA87645.1| OmpA domain protein transmembrane region-containing protein [Shewanella woodyi ATCC 51908] Length = 177 Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 11/140 (7%) Query: 44 NRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYT 102 D G Y G Y E + +A +AGY+ +E T Sbjct: 17 ATSATAAPDIQGYYIGAMGGYGELEANEFNESAASYGGYAGYSFGKD---LAIESTFFTT 73 Query: 103 VPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGT 162 + + + +L + + S + ++ +G AG A G Sbjct: 74 ANLADEGDVKARAV--TLAAKLNHFFSPTYSMFIKIGVASTDV----SAGIDDYSATGWI 127 Query: 163 AGVGVEVGGLSESLVARLEY 182 G G +++++ RL Y Sbjct: 128 WGAGFN-MAITDNVNVRLGY 146 >gi|220904319|ref|YP_002479631.1| surface antigen msp4 family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868618|gb|ACL48953.1| surface antigen msp4 family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 223 Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 22/138 (15%) Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI-HSLHGIGGSLRIR-- 123 G+ + + GG F GY+ + + + ++ Y + ++ + HG+ +L+ R Sbjct: 52 DTGDYSQNTVGGGAFVGYDFYPANDI-PLRAEIEYAIRTNSETDWDAKHGLDATLKGRWN 110 Query: 124 -------GGYEVSDS--LLLYATVGPDVAQKYET--------GKAGEITPIAIGGTAGVG 166 ++ + Y G + + AG G Sbjct: 111 LQTLFLNVYWDFHNDTAFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYNTVFAWNAGAG 170 Query: 167 VEVGGLSESLVARLEYRA 184 V +E++ A L YR Sbjct: 171 VSY-AFTETISADLAYRF 187 >gi|325661638|ref|ZP_08150262.1| hypothetical protein HMPREF0490_00996 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472165|gb|EGC75379.1| hypothetical protein HMPREF0490_00996 [Lachnospiraceae bacterium 4_1_37FAA] Length = 702 Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 10/77 (12%) Query: 47 VPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG-------YNVEDSCIMYGVEGDV 99 +P+ +D+ P +GL Y+ A + A G G Y ++ ++YG E DV Sbjct: 122 IPLIYDWRAPVSGLFYDYDKGP---ASYEAPGGTMEGAIEAKWQYKIQGGKMIYGFESDV 178 Query: 100 RYTVPVLADNIHSLHGI 116 + +L + + Sbjct: 179 KIDDDILKKELGQNGDV 195 >gi|117618219|ref|YP_855821.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559626|gb|ABK36574.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 333 Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 46/175 (26%) Query: 17 SFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY-----NGSFGEE 71 +AQAA +D+ Y G+ A + FG++ Sbjct: 18 GTSTAQAA--------------------------NDW---YTGIGAGWAYGHDLNDFGKD 48 Query: 72 AHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL-HGIGGSLRIRGGYEVS 129 A +A S+F GYN D+ +G E Y D + G S R + Sbjct: 49 ADKDATALSLFGGYNFNDN---FGAELGYLYAGKGGVDGVDFKTQGATLSGLARL--PLG 103 Query: 130 DSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 D ++A G G + T AG+GV LS+ + + YR Sbjct: 104 DIFSVFAEGGAYFNHVNGNGSSDNGTAPL----AGLGV-TAKLSDLIDLQARYRY 153 >gi|152994404|ref|YP_001339239.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1] gi|150835328|gb|ABR69304.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1] Length = 359 Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 23/151 (15%) Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDS---CIMYGVEGDVRYTVPVLADNIHSLHGIGG 118 YN + + S+ GY + +Y + +N+ Sbjct: 39 GYYNMDSDRDIKDDKAYSLGLGYQFNNPWAVEFVY-----LNADSKQAGNNVDVDQ---- 89 Query: 119 SLRIRGGYEV----SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSE 174 R+ G Y + + +L Y G + +G AG G++ L++ Sbjct: 90 -YRLDGLYHLPTISNVNLTPYLAAGVGTTD--FSNASGHDNVQVN---AGGGLKY-ALND 142 Query: 175 SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 ++ R ++R + N SLGV M F Sbjct: 143 TVSLRADFRLVNDVEDHHLDNVTSLGVQMTF 173 >gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida] Length = 348 Score = 38.5 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 48/233 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ + +LA+AS A YV + + + GL Sbjct: 1 MKKTAIALTIVALAVASVAQAV-----------------PQPNTFYVGAKAGWASFHDGL 43 Query: 61 S-ALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI------- 110 + Y SFG + + G +F GY + D+ + D Sbjct: 44 NQIEYKSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAK 102 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGT 162 H+ HG SL+ Y + D L +YA VG + + A I + Sbjct: 103 HTNHGTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPV 160 Query: 163 AGVGVEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 G+E + E + V + EY +Y+ +++ G+ +F Sbjct: 161 FAGGLEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213 >gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2] Length = 376 Score = 38.5 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 66/164 (40%), Gaps = 21/164 (12%) Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119 + + ++ S + + G IF GY + ++ + G D+ A + + + G Sbjct: 55 IGSGFSSSTIVDDDRSTGYKIFGGYQINNNFAVEGGYFDLG-NFGYTATTVPAGT-LDGR 112 Query: 120 LRIR------GG-YEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI--------GGTAG 164 +++R G +S+ ++ G + AQ ++ +A G Sbjct: 113 IKLRGLNLDLVGTLPLSEKFSVFGRAGLNYAQARDSFSGTGAVQVANPNPRKNDTNYKLG 172 Query: 165 VGVEVGGLSESLVARLE---YRASKYSKVEGFYNTISLGVGMKF 205 +G++ L+ESL R E YR + G + +S+G+ +F Sbjct: 173 LGLQY-ALTESLAVRAEAERYRVNDAIGNRGHVDLVSVGLIYRF 215 >gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi] gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi] gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi] gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi] Length = 360 Score = 38.5 bits (88), Expect = 0.61, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 43/220 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ V+ A+AS +A A+ V YV + + + G+ Sbjct: 1 MKKSLVALAVAGFAVASANAAPEANSV------------------YVGAKAGWASFHDGI 42 Query: 61 SALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH------S 112 S + + + G+ ++ F GY I+ + +V Y + S Sbjct: 43 SQIDHKNGGKYGINKNSVTYGAFVGY-----QIIDNLAAEVGYEYFGRVRGLEQTKAGGS 97 Query: 113 LHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQK------YETGKAGEITPIAIGG 161 S +G YEV L YA G + +T + + Sbjct: 98 KKTFRHSAHGTTIALKGNYEVISGLDTYAKAGIALVNNSYKTVNVDTKVPTKTSRFQSSL 157 Query: 162 TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGV 201 G GVE ++ SL AR+EY+ + + +GV Sbjct: 158 ILGAGVEY-AITPSLGARIEYQWLNNAGKASYATLRRMGV 196 >gi|163802616|ref|ZP_02196508.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] gi|159173699|gb|EDP58518.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp. AND4] Length = 315 Score = 38.5 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 21/158 (13%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + + F GY + D + VE V Sbjct: 23 YMGGKMGKSWVDDACVAGQACDKDGSTLGAFVGYEMND---YFAVEAGFD-NVGDFDQTS 78 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 H +L + V++ + LY VG Y G+ +G GVE Sbjct: 79 LGGHVEAITLAPKFSLPVTEDIALYGKVGGA----YLMMNDGKDDFSYLG---AAGVEFN 131 Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 +SE++ AR EY+A + S V+ N+ +LGV KF Sbjct: 132 -ISENVTARAEYQAITDISNDAVKAMGNSATLGVAFKF 168 >gi|168819104|ref|ZP_02831104.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343988|gb|EDZ30752.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084561|emb|CBY94353.1| Opacity protein opA58 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 239 Score = 38.5 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFDINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|56552386|ref|YP_163225.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4] gi|260753935|ref|YP_003226828.1| outer-membrane immunogenic protein precursor; secreted protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543960|gb|AAV90114.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4] gi|258553298|gb|ACV76244.1| putative outer-membrane immunogenic protein precursor; putative secreted protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 204 Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 74/228 (32%), Gaps = 48/228 (21%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ A V++ A+A+ AQ PT F G Sbjct: 1 MRKIIFAAAVATAAIAAQAPAQ------------VINTPT-----------TFRGFRIEG 37 Query: 61 SALYNGSFGEEAHHNAGG-SIFAGYNVEDSC-IMYGVEG---DVRYTVPVLADNIHSLHG 115 ++ + N G AG + + + G EG + N + G Sbjct: 38 DIGWDRARANGVGQNNMGYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATTG 97 Query: 116 IGGSL----------RIRGGYEVSDSLLLYATVGPDVAQ--------KYETGKAGEITPI 157 GGS+ IR G+ +LLYA G + Sbjct: 98 NGGSVSTKAFQEWDASIRMGFLAQPDILLYAVGGYATTRERTLYTGVGGTGVGGYRNVGW 157 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + G + G GVE +S+ +YR S++S +LG G++F Sbjct: 158 SDGYSVGGGVEYS-ISKMFFMNAQYRYSQFSNHTS-RQRATLGFGVRF 203 >gi|289669429|ref|ZP_06490504.1| membrane protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 124 Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 14/93 (15%) Query: 120 LRIRGGYEVSDS--LLLYATVGPDVAQ--------KYETGKAGEITPIAIGGTAGVGVEV 169 +R R GY + + L Y T G + A G AG+G++ Sbjct: 1 MRGRIGYALGEHGDYLAYVTAGVARGEFDHSFNSSNTANSFTSSGGDSADGYQAGIGLQR 60 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 LS+++ +EY ++ + +G G Sbjct: 61 W-LSDNVSVGVEYLFTRLQD---DATRVRVGPG 89 >gi|269961586|ref|ZP_06175948.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833627|gb|EEZ87724.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 318 Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 21/158 (13%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + + F GY + D + VE + Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDGSTLGAFVGYEMND---YFSVEAGFD-NLGDFDQTS 78 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 H +L + +++ + LY VG Y G+ +G G+E Sbjct: 79 FGGHVEAITLAPKFSLPITEDIALYGKVGGA----YLMMNDGKDDYSYLG---AAGLEFN 131 Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 +SE++ AR EY+ + S V+ N+ +LGV KF Sbjct: 132 -ISENVTARAEYQTITDISNDSVKAMGNSATLGVAFKF 168 >gi|168465379|ref|ZP_02699261.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631629|gb|EDX50149.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 239 Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKSGQDIIAFGDPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|269104129|ref|ZP_06156825.1| transporter [Photobacterium damselae subsp. damselae CIP 102761] gi|268160769|gb|EEZ39266.1| transporter [Photobacterium damselae subsp. damselae CIP 102761] Length = 201 Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 29/111 (26%), Gaps = 13/111 (11%) Query: 54 NGPYAGLSALYNGSFGEEAH---------HNAGGSIFAGYNVEDSCIMYGVEGDVR-YTV 103 GPY G++ G + G I AGY + + YGVE Y Sbjct: 26 AGPYIGVNIGSGGMDTPDLEVNQTSSYELRGLAGGIDAGYLWQTQQVEYGVELGFDTYAK 85 Query: 104 PVLADNIHSLHGIGG---SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA 151 G L Y S ++ G + T Sbjct: 86 NKYRIGDFFRMDYKGYNLDLLGVAKYNFSSQWNVFGKAGLAYVNQKLTVDG 136 >gi|239832569|ref|ZP_04680898.1| outer surface protein [Ochrobactrum intermedium LMG 3301] gi|239824836|gb|EEQ96404.1| outer surface protein [Ochrobactrum intermedium LMG 3301] Length = 290 Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 50/176 (28%), Gaps = 36/176 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ + V+ +A +A AAD + +P + +G Y Sbjct: 6 MKCISAIAIVAVSLMAGSSAAFAADIIAE------------PVIEPMPEPVNASGWYIRG 53 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIMYGVEGDVRYTVPVLADNIHSLHGIG- 117 YN + GG +N + G++ +RY L G+G Sbjct: 54 DLGYNF------KSSTGGE----WNFWNQFDPPYRGIDDTLRYDDFNLKAGATYGVGVGY 103 Query: 118 ---GSLRI-------RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163 + R R G Y G + + E + A TA Sbjct: 104 RFTDTFRADATLDYFRAGINGRTPCPSYVKSGKGLNPVEDNCNY-EDSSTANIWTA 158 >gi|300922124|ref|ZP_07138263.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1] gi|300421526|gb|EFK04837.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1] Length = 249 Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 78/253 (30%), Gaps = 62/253 (24%) Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGPYAG 59 + + VS+LA+A SAQA AD + + ++ + R++ ++ Y G Sbjct: 8 MKKIMAVSALAVAGMFSAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADRYKG 67 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VPVLA 107 G++ G I AGY+ + + D +Y Sbjct: 68 ---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSH 118 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA-------------- 151 D++ S + +L + Y+ + + + G A+ ++ Sbjct: 119 DDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRE 177 Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK----------------VEG 192 + + G GV ++ + L YR V+ Sbjct: 178 SLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDV 236 Query: 193 FYNTISLGVGMKF 205 + I LGV F Sbjct: 237 KSHDIMLGVTYNF 249 >gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida] Length = 348 Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 48/233 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ + +LA+AS A YV + + + GL Sbjct: 1 MKKTAIALTIVALAVASVAQAV-----------------PQPNTFYVGAKAGWASFHDGL 43 Query: 61 S-ALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI------- 110 + Y SFG + + G +F GY + D+ + D Sbjct: 44 NQIEYKSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAK 102 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGT 162 H+ HG SL+ Y + D L +YA VG + + A I + Sbjct: 103 HTNHGTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPV 160 Query: 163 AGVGVEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 G+E + E + V + EY +Y+ +++ G+ +F Sbjct: 161 FAGGLEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213 >gi|254516258|ref|ZP_05128318.1| putative outer membrane protein [gamma proteobacterium NOR5-3] gi|219675980|gb|EED32346.1| putative outer membrane protein [gamma proteobacterium NOR5-3] Length = 167 Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 21/159 (13%) Query: 57 YAG-LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY----TVPVLADNIH 111 Y G + + + + F GY DS ++ + +V Y D+++ Sbjct: 17 YVGAGAYFTDVEIAAGGEDDITPAGFVGYQFLDSNLLM-LSAEVGYYDLGAWSGSLDDVN 75 Query: 112 SLHGIGGSLRIRGGYEVSDSLL-LYATVGPDVAQKY----ETGKAGEITPIAIGGTAGVG 166 Y +YA G + +T + + T IG AGV Sbjct: 76 YSVDASALTFAGVAYVPLGPFFEVYAKAGLAAVEVKTRFADTPRTDDDTETFIG--AGVA 133 Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 ++ + ++Y + + ++ +GVG++F Sbjct: 134 LDFFDTVDI--------YAEYLQFDNQIDSQMIGVGIRF 164 >gi|205351630|ref|YP_002225431.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271411|emb|CAR36219.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626661|gb|EGE33004.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 239 Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|88813477|ref|ZP_01128712.1| hypothetical protein NB231_00430 [Nitrococcus mobilis Nb-231] gi|88789267|gb|EAR20399.1| hypothetical protein NB231_00430 [Nitrococcus mobilis Nb-231] Length = 137 Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 31/93 (33%), Gaps = 3/93 (3%) Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156 D +V + S G S+ G + LLY VG + Sbjct: 20 ADGNVSVNGAGLKLESEETYGASVLF--GRRIVPGALLYGRVGWQWLNSTARLNGDSDSQ 77 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G AG G + LS+ + R+EY S Y Sbjct: 78 RLNGIRAGAGG-MWALSDMVTFRIEYTHSFYQS 109 >gi|197250348|ref|YP_002145288.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214051|gb|ACH51448.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 219 Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 27/147 (18%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKV 190 G+G + ++++++ Y+ KV Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKV 205 >gi|295132772|ref|YP_003583448.1| tonB dependent receptor [Zunongwangia profunda SM-A87] gi|294980787|gb|ADF51252.1| tonB dependent receptor [Zunongwangia profunda SM-A87] Length = 454 Score = 38.1 bits (87), Expect = 0.79, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 10/124 (8%) Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 Y+ + S+ G+N+ + M + +V + G+ SL Sbjct: 48 GYSAFGANTNKYGTFPSLAVGWNIHNEDFMKNAD-EVNNLKLRFSYGQTGNRGVNKSLAG 106 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 +LYA G + G T +G++ G L+ + +E Sbjct: 107 ---------TILYAFGGTAYTGTFLAGLGNPNLVWETTTTVNLGIDFGFLNNRINGTVEI 157 Query: 183 RASK 186 S Sbjct: 158 YHSN 161 >gi|253701760|ref|YP_003022949.1| OmpA/MotB domain protein [Geobacter sp. M21] gi|251776610|gb|ACT19191.1| OmpA/MotB domain protein [Geobacter sp. M21] Length = 486 Score = 38.1 bits (87), Expect = 0.80, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 64/208 (30%), Gaps = 26/208 (12%) Query: 1 MQKLFLAVGVSS-LALASFCSAQAADPVRRAH--HGGRGVVPTIATNRYVPIRHDFNGPY 57 M K+ LA+ + +++ C + AA + GG V PT+ + +GP Sbjct: 1 MSKIVLALVCALIMSITFPCGSSAAPRKKGQPITTGGFSVTPTVGWYNFEGADLFESGPI 60 Query: 58 AGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIG 117 GL Y G N+ DS G+EG V Y L S Sbjct: 61 TGLKFGYE---------------HIGKNIADS---IGIEGTVNYVSTKLKTGSESASAYL 102 Query: 118 GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLV 177 L + D Y G + GV V+ + E LV Sbjct: 103 LRLDALYPVLLKDKTAPYIVAGI--GDLRTKAGSLSDDSPLFNY--GVTVKY-FMEEYLV 157 Query: 178 ARLEYRASKYSKVEGFYNTISLGVGMKF 205 R + R N L VG+ + Sbjct: 158 LRADARHLLVYNNINTNNNFELSVGVSY 185 >gi|16763689|ref|NP_459304.1| adhesin/invasin protein PagN [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993323|ref|ZP_02574418.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240044|ref|ZP_02664976.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261280|ref|ZP_02683253.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194447578|ref|YP_002044291.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197266028|ref|ZP_03166102.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198244187|ref|YP_002214261.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207855791|ref|YP_002242442.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|81523864|sp|Q8ZRJ9|PAGN_SALTY RecName: Full=Outer membrane protein PagN; AltName: Full=Adhesin/invasin protein PagN; Flags: Precursor gi|16418808|gb|AAL19263.1| homolog of sapA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194405882|gb|ACF66101.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197244283|gb|EDY26903.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938703|gb|ACH76036.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205328580|gb|EDZ15344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339886|gb|EDZ26650.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205349833|gb|EDZ36464.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707594|emb|CAR31876.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261245532|emb|CBG23326.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267991998|gb|ACY86883.1| SapA-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156922|emb|CBW16403.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911275|dbj|BAJ35249.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224967|gb|EFX50028.1| Peptide transport periplasmic protein sapA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128624|gb|ADX16054.1| SapA-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622004|gb|EGE28349.1| SapA-like protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987255|gb|AEF06238.1| SapA-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 239 Score = 38.1 bits (87), Expect = 0.82, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|194337226|ref|YP_002019020.1| porin, opacity type [Pelodictyon phaeoclathratiforme BU-1] gi|194309703|gb|ACF44403.1| porin, opacity type [Pelodictyon phaeoclathratiforme BU-1] Length = 212 Score = 38.1 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 21/126 (16%) Query: 82 AGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL-----HGIGG--SLRIRGGYEVSDSLL- 133 AG + ED Y +E ++ Y + G SL G Y+ + + Sbjct: 67 AGLDFED----YRIEAELSYQKGDVNRGTEHGGTADMQGFKSVTSLMANGYYDFNPEGIN 122 Query: 134 LYATVGPDVAQKYETG--------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS 185 Y T G ++ +G G G+ + ++ + +YR S Sbjct: 123 PYLTGGLGCSRVNFDNVKVKGAPYPGLTEHHTVLGYQLGAGIGIP-ITREVTVDAQYRYS 181 Query: 186 KYSKVE 191 +S++ Sbjct: 182 GHSRIS 187 >gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida] gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida] gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida] gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida] Length = 348 Score = 38.1 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 79/233 (33%), Gaps = 48/233 (20%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K +A+ + +LA+AS A YV + + + GL Sbjct: 1 MKKTAIALTIVALAVASVAQAV-----------------PQPNTFYVGAKAGWASFHDGL 43 Query: 61 S-ALYN--GSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI------- 110 + Y SFG + + G +F GY + D+ + D Sbjct: 44 NQIEYKSKTSFGSKRNSVTYG-VFGGYQITDNFAVELGYDDFGRAKVRANSKTTAFDAAK 102 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP--------IAIGGT 162 H+ HG SL+ Y + D L +YA VG + + A I + Sbjct: 103 HTNHGTHLSLKA--SYPLLDGLDVYARVGAALIRSDYKLYAPLINKRLSPHFKITQVSPV 160 Query: 163 AGVGVEVGGLSE----------SLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 G+E + E + V + EY +Y+ +++ G+ +F Sbjct: 161 FAGGLEYAFIPELTLRVEYQWVNNVGKFEYADGQYADFRPDIGSVTAGLSYRF 213 >gi|200389864|ref|ZP_03216475.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602309|gb|EDZ00855.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 239 Score = 38.1 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|213865487|ref|ZP_03387606.1| outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 233 Score = 38.1 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 81 FAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLY 135 F GY V G E + Y P DN + + G L + GY ++D L +Y Sbjct: 1 FGGYQV---NPYVGFE--MGYDWLGRMPYKGDNTNGAYKAQGVQLTAKLGYPITDDLDVY 55 Query: 136 ATVG--PDVAQKYETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASK 186 +G A G T + G+E ++ + RLEY+ + Sbjct: 56 TRLGGMVWRADTKSNVPGGASTKDHDTGVSPVFAGGIEY-AITPEIATRLEYQWTN 110 >gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 371 Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 35/159 (22%) Query: 79 SIFAGYN-VEDSCIMYGVEGDVRYTVPVLADN------IHSLHGIGGSLRIRGGYEVSDS 131 +F GY + + E Y V ++ HS HG+ +L+ YEV + Sbjct: 71 GVFGGYQILNQNNFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKP--SYEVLPN 128 Query: 132 LLLYATVGPDVAQKY--------ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR 183 L +Y VG V + + + G GVE L E L AR+EY+ Sbjct: 129 LDVYGKVGVAVVRNDYKEYGAENTNEPTEKFHKLKASTILGAGVEYAILPE-LAARIEYQ 187 Query: 184 A-------------SKYSKVEGFY----NTISLGVGMKF 205 S V+ Y ++++ G+ +F Sbjct: 188 YLNKAGNLNKALVRSGTQDVDFQYAPDIHSVTAGLSYRF 226 >gi|264680428|ref|YP_003280338.1| Opacity protein-like surface antigen [Comamonas testosteroni CNB-2] gi|262210944|gb|ACY35042.1| Opacity protein-like surface antigen [Comamonas testosteroni CNB-2] Length = 223 Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 25/148 (16%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119 G+E++ GGS+ GY + + + VE + YT+P + S Sbjct: 54 GDESNTATGGSLALGYQLPSN---WRVEAE--YTLPKNNEFTSGSTRFPTSFNHHQIRSQ 108 Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169 + + ++ LY G +A+ +G G T + + G GV Sbjct: 109 RLMVNAYKDFPLNARFSLYGMAGLGLARLESSGWQGNPGRQYISDTQSNLAYSVGFGVSY 168 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTI 197 + + L L +R K + N Sbjct: 169 SPV-QKLSIDLGWRYVDMGKAKSGANNF 195 >gi|257464192|ref|ZP_05628572.1| Serine protease [Fusobacterium sp. D12] gi|317061711|ref|ZP_07926196.1| predicted protein [Fusobacterium sp. D12] gi|313687387|gb|EFS24222.1| predicted protein [Fusobacterium sp. D12] Length = 753 Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Query: 161 GTAGVGVEVGGLSE-SLVARLEYRASKYSKVEGFYNTIS-LGVGMKF 205 T G G++ SL+ R Y +Y + N++S G G+ F Sbjct: 679 WTVGAGLQYHIFDNFSLLGR--YNYMQYYDLHNHQNSLSGFGAGIGF 723 >gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 352 Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 52/202 (25%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSFGEEAH--------------HNAGGSIFAGYNV 86 A + + + Y G ++ +G + + ++ G F GY + Sbjct: 15 AANAQAAGQDNTW---YGGAKLGWSNFYGVDHNQAIKDDYAISEEDKNDVGAGAFLGYQI 71 Query: 87 EDSCIMYGVEGDVRYTV---------------PVLADNIHSLHGIGGSLRIRGGYEVSDS 131 + GVE + Y + D I + L ++ G VS+S Sbjct: 72 NQN---LGVE--LGYDWLGKYKYTATDKLIPTDISRDEIKAQLA---QLTMKIGLPVSES 123 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS------ 185 L LY +G A + +G +G E + ARLEY+ + Sbjct: 124 LDLYTRLGGAYAWTDSKQLDNDNGAAFVG---ALGAEY-AFNRDWAARLEYQYTTPLGDK 179 Query: 186 --KYSKVEGFYNTISLGVGMKF 205 + E +++GV +F Sbjct: 180 ALDKTGAELDNGLLAVGVVYRF 201 >gi|167553110|ref|ZP_02346860.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322381|gb|EDZ10220.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 239 Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 37/221 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ F AV + L +A +A A D + G VV N NG Sbjct: 1 MKNFF-AVCIIPLVVAWSATASAKDGIYITGKAGTSVVNVYGINSTFSQDEIVNG----- 54 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIH 111 + + + GG + GY+ D + E D + ++A Sbjct: 55 ----HATLPDRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDP 110 Query: 112 SLHGIGGSLR-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEI 154 + +R + G Y+ +S Y + G +A + Sbjct: 111 VHINVKNQIRMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSA 170 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 + AG+G + ++++++ Y+ KV N Sbjct: 171 SKNNFAWGAGIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2] Length = 347 Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 49/151 (32%), Gaps = 25/151 (16%) Query: 47 VPIRHDFNGPYAGLSALYNGS------FGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVR 100 V +F G + GL A N S A + + + GYN + ++ GV G Sbjct: 19 VAQAGEFTGGWIGLKAGNNNSDVTSLVAAASAKNASTYGLEGGYNWDMGGLLLGVNGFAD 78 Query: 101 YT----VPVLADNIHSLHGIGGSLRIRGGYEV-----SDSLLLYATVGPDVAQKYETGKA 151 + + S +G G +V S + L YA VG Sbjct: 79 FNQKVDHATATPGVVSNYGSDA-----LGLDVKLGLPSGNWLPYAKVGYASVAAKGVAVT 133 Query: 152 GEITPIAIGGTAGVGVEVGGLSESLVARLEY 182 G + + G+GVE + EY Sbjct: 134 GTGSGAHL----GLGVEY-KFAPHWSVAGEY 159 >gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01] gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01] Length = 356 Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 53/166 (31%), Gaps = 29/166 (17%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVP 104 Y G + G I++GYN D +G+E GD + + Sbjct: 28 YVGAKVGMGWLDSACVDGTKCDDDAIGAGIYSGYNFSDK---FGIELSSDFLGDYKTSFT 84 Query: 105 VLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163 I SL V ++ GP GE + +A Sbjct: 85 KNGTTSQFSDPIIAISLTPMYRLAVQQEFDVFFKAGPAY-----ISHGGEDDVVL---SA 136 Query: 164 GVGVEVGGLSESLVARLEYRA-SKYSK---VEGFYNTISLGVGMKF 205 G+G+E LS R+EY+ + + N +S+GV F Sbjct: 137 GIGLE-KQLSSDWAVRVEYQYFDDFDDNYVQDLNSNLLSVGVSYNF 181 >gi|62178877|ref|YP_215294.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126510|gb|AAX64213.1| sapA-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713329|gb|EFZ04900.1| sapA-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 239 Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQI 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|99032472|pdb|2GE4|A Chain A, High-Resolution Solution Structure Of Outer Membrane Protein A Transmembrane Domain Length = 177 Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 13/149 (8%) Query: 47 VPIRHDF-NGPYAGLSALYNGSF----GEEAHHNAGGSIFAGYNVEDSCIMYGVEG--DV 99 P + + G G S ++ F G + G F GY V G E D Sbjct: 2 APKDNTWYTGAKLGFSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFEMGYDF 58 Query: 100 RYTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYAT-VGPDVAQKYETGKAGEITPI 157 +P + + G L + GY ++D L +Y G ++ G+ Sbjct: 59 LGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVFRADTKSNVYGKNHDT 118 Query: 158 AIGGTAGVGVEVGGLSESLVARLEYRASK 186 + GVE ++ + RLEY+ + Sbjct: 119 GVSPVFAGGVEY-AITPEIATRLEYQFTN 146 >gi|1136304|gb|AAB06592.1| tia invasion determinant [Escherichia coli ETEC H10407] Length = 251 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 44/231 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59 M ++ + VS+LA+A SAQA AD + + ++ R DF Sbjct: 1 MIEMKKVIAVSALAMAGMFSAQALADESKTGFYVTGKAGASVVMQTDQRFRQDF------ 54 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110 +Y G++ G + GY+ + + YG D RYT+ + Sbjct: 55 GDDVYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPM 114 Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160 R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGE 174 Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 ISDISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 224 >gi|189501037|ref|YP_001960507.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides BS1] gi|189496478|gb|ACE05026.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides BS1] Length = 203 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 53/199 (26%), Gaps = 27/199 (13%) Query: 1 MQKLFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDF---NGP 56 M+K F + L A AA P G + + A + V + + G Sbjct: 1 MKKSFSFFIGTLLVFLFSSPLAHAAAPYASLSAGLGFLTNSSADDGVVKVEDVWGFNTGY 60 Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPV----LADNIHS 112 + +G GY + G+E + V N + Sbjct: 61 LVNGAVGLDGDMYRVEAA-------IGYQSNSIDTLLGIEIPGDWNWRVSILSFMANGYL 113 Query: 113 LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGL 172 GS ++ Y T G +A G G+ + Sbjct: 114 DIESEGS-----------TVTPYLTAGAGIANVSFNDGITSDDDTVFAYQLGAGIGFE-V 161 Query: 173 SESLVARLEYRASKYSKVE 191 SE + YR S V+ Sbjct: 162 SEDTTVDVGYRYFATSDVD 180 >gi|15601905|ref|NP_244977.1| PfhR [Pasteurella multocida subsp. multocida str. Pm70] gi|12720243|gb|AAK02124.1| PfhR [Pasteurella multocida subsp. multocida str. Pm70] Length = 727 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 55 GPYAGLSALYNGSFGEEAHHNAGGSI-----FAGYNVEDSCIMYGVEGDVRYTVPVLADN 109 G Y +A + S G+ A+ G + F G + ++G+EG +++ + Sbjct: 595 GTYL--NAGFAYSKGKTANKQPQGRLDPLTGFVGLGYQQPMDVWGIEGKLKFAAKKKTKD 652 Query: 110 IHSLHGIGGSLRIRGGYEVSDSLLLY 135 + + G G GY V D Y Sbjct: 653 LLANQGFEGLP----GYAVVDLTAYY 674 >gi|16759301|ref|NP_454918.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142926|ref|NP_806268.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163732|ref|ZP_03349442.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213421110|ref|ZP_03354176.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425134|ref|ZP_03357884.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213585681|ref|ZP_03367507.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213621844|ref|ZP_03374627.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646043|ref|ZP_03376096.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852831|ref|ZP_03382363.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289826866|ref|ZP_06545776.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513091|pir||AH0541 probable outer membrane adhesin STY0351 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501592|emb|CAD08776.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi] gi|29138558|gb|AAO70128.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 239 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|197335419|ref|YP_002157050.1| outer membrane protein [Vibrio fischeri MJ11] gi|197316909|gb|ACH66356.1| outer membrane protein [Vibrio fischeri MJ11] Length = 206 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 38/203 (18%) Query: 34 GRGVVPTIATNRYVPIRHDFNGPYAGL-----------SALYNGSFGEEAHHNAGGSIFA 82 T+A + + +G YAG+ S YN + ++ Sbjct: 11 STASFYTLANDNMDISQPKISGFYAGVGFGSFGYSEEDSWGYNNNPISAEADGNSTKVYL 70 Query: 83 GYNVEDSCIMYGVEGDV-RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD 141 GY + G+EG Y +S+ SL GY + + + VG Sbjct: 71 GYQF---NKIVGIEGTYTDYGTAKAKVGNYSMKPSSISLAANLGYTFKNGIRPFGLVGMS 127 Query: 142 VAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR-----------ASKYSKV 190 ++ + A G GVE + + +++R Y Sbjct: 128 SLDLNQSEELLTDDSGAA-FKFGFGVEY---TPKALGGVQFRAAYEMDMYAVEYLDYQSG 183 Query: 191 EGF--------YNTISLGVGMKF 205 G +++ +G KF Sbjct: 184 AGLTTETNLYALDSLYVGASYKF 206 >gi|304411584|ref|ZP_07393197.1| OmpA domain-containing protein [Shewanella baltica OS183] gi|307306640|ref|ZP_07586382.1| OmpA domain-containing protein [Shewanella baltica BA175] gi|304350111|gb|EFM14516.1| OmpA domain-containing protein [Shewanella baltica OS183] gi|306910608|gb|EFN41037.1| OmpA domain-containing protein [Shewanella baltica BA175] Length = 192 Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 21/166 (12%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 NG Y G + Y G++ + I GY + G G V + + + Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 G +L + Y + D + LYA G G +G G AG GV Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFAGAGV-A 146 Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205 +++ + EY + + SLGV +F Sbjct: 147 FKVTDRFLINAEYTWYDAGITIENVSNGADTDTDFKQASLGVEYRF 192 >gi|224582147|ref|YP_002635945.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466674|gb|ACN44504.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 239 Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGDPVHINVKNQI 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|238913304|ref|ZP_04657141.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 239 Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|322614599|gb|EFY11528.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620118|gb|EFY16990.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623412|gb|EFY20251.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629290|gb|EFY26069.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632010|gb|EFY28764.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637252|gb|EFY33954.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642449|gb|EFY39051.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646297|gb|EFY42811.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652434|gb|EFY48788.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653404|gb|EFY49737.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660448|gb|EFY56684.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664600|gb|EFY60793.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669347|gb|EFY65497.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670893|gb|EFY67026.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678868|gb|EFY74923.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681897|gb|EFY77922.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322688023|gb|EFY83989.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194378|gb|EFZ79573.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197793|gb|EFZ82925.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203411|gb|EFZ88436.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206844|gb|EFZ91797.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210387|gb|EFZ95279.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214629|gb|EFZ99380.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223185|gb|EGA07528.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224844|gb|EGA09107.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230048|gb|EGA14168.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233786|gb|EGA17875.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238520|gb|EGA22578.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244208|gb|EGA28217.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246368|gb|EGA30351.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251994|gb|EGA35857.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257991|gb|EGA41670.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259912|gb|EGA43543.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265074|gb|EGA48573.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272637|gb|EGA56044.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 239 Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|194444662|ref|YP_002039548.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403325|gb|ACF63547.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 239 Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|126735844|ref|ZP_01751589.1| outer membrane protein, putative [Roseobacter sp. CCS2] gi|126715031|gb|EBA11897.1| outer membrane protein, putative [Roseobacter sp. CCS2] Length = 200 Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 24/108 (22%) Query: 83 GYNV-EDSCIMYGVEGDVRYTVPVLA---------------DNIHSLHGIGGSLRIRGGY 126 GY V +++ VE D+ + + + + R GY Sbjct: 48 GYEVARTGNVVFAVEADISFGNYDSGQVLVDTTPCITNAPDEACRAEVSAIATGRALIGY 107 Query: 127 EVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGV 167 + + Y T G +A+ G + G TAG+G+ Sbjct: 108 K-QGAFTPYITGGVAIARASGHADTGACGGSDCDFDEALTGWTAGLGI 154 >gi|326476400|gb|EGE00410.1| Neurofilament heavy polypeptide [Trichophyton tonsurans CBS 112818] Length = 1856 Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 37/131 (28%), Gaps = 26/131 (19%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 P + + V + P G+S FG E + G F G+ G E D Sbjct: 359 PAPSAFQDVSLDDGAAAPQIGMS------FGGEDTKGSTGFSFGGWG---KDWNTGGELD 409 Query: 99 VRYTVPVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150 + D ++ G GS G+E + G D G Sbjct: 410 LGANGDTKDDGLNPWGGTSKKNKKNSTGSDAFDFGFESN---------GLDGKNADPAGD 460 Query: 151 AGEITPIAIGG 161 AG + Sbjct: 461 AGADKEPEVSW 471 >gi|319897366|ref|YP_004135562.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3031] gi|317432871|emb|CBY81237.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3031] Length = 348 Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYN-VEDSCIMYGVE---GDVRY 101 + G AG ++ +NG + H+AG +F GY + + + VE D Sbjct: 29 YAGVKAGQASFHNGVRAQARKHDAGYHRNSFTYGVFGGYQILNQNNLGLAVELGYDDFGR 88 Query: 102 TVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEITP 156 + H G+ L ++G YEV + L +Y G + + Y + Sbjct: 89 AKGRREGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYSVDDHKDGHR 148 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYN------------TISLGVGM 203 + G VG E L E L RLEY+ ++ K N +I+ G+ Sbjct: 149 VRASGLFAVGAEYAVLPE-LAVRLEYQWLTRVGKYRPQDNPNSAINYTPWIGSINAGISY 207 Query: 204 KF 205 +F Sbjct: 208 RF 209 >gi|330830631|ref|YP_004393583.1| major outer membrane protein ompAII [Aeromonas veronii B565] gi|328805767|gb|AEB50966.1| Major outer membrane protein ompAII [Aeromonas veronii B565] Length = 333 Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 44/141 (31%), Gaps = 21/141 (14%) Query: 52 DFNGPYAGLSALY-------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVP 104 D+ Y G+ A + + + S+F GYN D Y E Y Sbjct: 26 DW---YTGVGAGWAYAHNLDDVQGLDTDKDATALSLFGGYNFND---YYAAELGYLYAGK 79 Query: 105 VLADNIHSL-HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTA 163 D G S R + D ++A G G + T A Sbjct: 80 AGVDGADFKTQGATLSGIARL--PLGDIFSVFAEGGAYFNHVNGNGNSDNGTAPL----A 133 Query: 164 GVGVEVGGLSESLVARLEYRA 184 G+G+ LS+ + + YR Sbjct: 134 GLGL-TAKLSDLIDVQARYRY 153 >gi|323160774|gb|EFZ46709.1| ompA-like transmembrane domain protein [Escherichia coli E128010] Length = 251 Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 71/231 (30%), Gaps = 44/231 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59 M ++ + VS+LA+A SAQA AD + + ++ R D Sbjct: 1 MIEMKKVIAVSALAMAGVFSAQALADENKTGFYVTGKAGASVVAQTDQRFRQDL------ 54 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110 +Y G++ G + GY+ + + YG D YT+ + Sbjct: 55 GEDVYKYKGGDKNDTVFGEGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPM 114 Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160 + R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GNGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYTDTSRNESGE 174 Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 ISDISELHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKFSLSY 224 >gi|152999073|ref|YP_001364754.1| OmpA domain-containing protein [Shewanella baltica OS185] gi|151363691|gb|ABS06691.1| OmpA domain protein transmembrane region-containing protein [Shewanella baltica OS185] Length = 192 Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 21/166 (12%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 NG Y G + Y G++ + I GY + G G V + + + Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 G +L + Y + D + LYA G G +G G AG GV Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFAGAGV-A 146 Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205 +++ + EY + + SLGV +F Sbjct: 147 FKVTDRFLINAEYTWYDAGITVENVSNGADTDTDFKQASLGVEYRF 192 >gi|56414566|ref|YP_151641.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168238589|ref|ZP_02663647.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734644|ref|YP_002113331.1| adhesin/invasin PagN [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197363496|ref|YP_002143133.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204927007|ref|ZP_03218209.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|56128823|gb|AAV78329.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194710146|gb|ACF89367.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197094973|emb|CAR60510.1| possible outer membrane adhesin [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197288560|gb|EDY27937.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204323672|gb|EDZ08867.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 239 Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|189475078|gb|ACE00213.1| OmpA [Vibrio alginolyticus] Length = 320 Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 52/163 (31%), Gaps = 32/163 (19%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + ++ F GY + + VE Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEAGFD------NIGD 73 Query: 111 HSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 + G + + +++ + LY VG G+ +G Sbjct: 74 FNQTSFSGHVEAITLAPKFSLPITEDIALYGKVGGAY-----VMFDGKDDYSYLG---AA 125 Query: 166 GVEVGGLSESLVARLEYR-ASKYSK--VEGFYNTISLGVGMKF 205 G+E LS+++ AR EY+ + S NT +LGV KF Sbjct: 126 GLEFN-LSQNVTARAEYQTLTDISNDVTRATGNTATLGVSFKF 167 >gi|160873670|ref|YP_001552986.1| OmpA domain-containing protein [Shewanella baltica OS195] gi|160859192|gb|ABX47726.1| OmpA domain protein transmembrane region-containing protein [Shewanella baltica OS195] gi|315265901|gb|ADT92754.1| OmpA domain-containing protein [Shewanella baltica OS678] Length = 192 Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 21/166 (12%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 NG Y G + Y G++ + I GY + G G V + + + Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 G +L + Y + D + LYA G G +G G AG GV Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFAGAGV-A 146 Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205 +++ + EY + + SLGV +F Sbjct: 147 FKVTDRFLINAEYTWYDAGITVENVSSGADTDTDFKQASLGVEYRF 192 >gi|226344125|gb|ACO48685.1| OmpA [Escherichia coli] gi|226344127|gb|ACO48686.1| OmpA [Escherichia coli] gi|226344129|gb|ACO48687.1| OmpA [Escherichia coli] gi|226344131|gb|ACO48688.1| OmpA [Escherichia coli] gi|226344133|gb|ACO48689.1| OmpA [Escherichia coli] gi|226344135|gb|ACO48690.1| OmpA [Escherichia coli] gi|226344137|gb|ACO48691.1| OmpA [Escherichia coli] gi|226344139|gb|ACO48692.1| OmpA [Escherichia coli] gi|226344141|gb|ACO48693.1| OmpA [Escherichia coli] gi|226344143|gb|ACO48694.1| OmpA [Escherichia coli] gi|226344145|gb|ACO48695.1| OmpA [Escherichia coli] gi|226344147|gb|ACO48696.1| OmpA [Escherichia coli] gi|226344149|gb|ACO48697.1| OmpA [Escherichia coli] gi|226344151|gb|ACO48698.1| OmpA [Escherichia coli] gi|226344153|gb|ACO48699.1| OmpA [Escherichia coli] gi|226344155|gb|ACO48700.1| OmpA [Escherichia coli] gi|226344157|gb|ACO48701.1| OmpA [Escherichia coli] gi|226344159|gb|ACO48702.1| OmpA [Escherichia coli] gi|226344161|gb|ACO48703.1| OmpA [Escherichia coli] gi|226344163|gb|ACO48704.1| OmpA [Escherichia coli] gi|226344165|gb|ACO48705.1| OmpA [Escherichia coli] gi|226344167|gb|ACO48706.1| OmpA [Escherichia coli] gi|226344169|gb|ACO48707.1| OmpA [Escherichia coli] gi|226344171|gb|ACO48708.1| OmpA [Escherichia coli] gi|226344173|gb|ACO48709.1| OmpA [Escherichia coli] gi|226344177|gb|ACO48711.1| OmpA [Escherichia coli] gi|226344179|gb|ACO48712.1| OmpA [Escherichia coli] gi|226344181|gb|ACO48713.1| OmpA [Escherichia coli] gi|226344183|gb|ACO48714.1| OmpA [Escherichia coli] gi|226344185|gb|ACO48715.1| OmpA [Escherichia coli] gi|226344187|gb|ACO48716.1| OmpA [Escherichia coli] gi|226344189|gb|ACO48717.1| OmpA [Escherichia coli] Length = 153 Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 16/132 (12%) Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHG 115 + + G + G F GY V G E + Y + + + G Sbjct: 3 GFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGSVENGAYKAQG 57 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSE 174 + L + GY ++D L +Y +G V + G+ + GVE ++ Sbjct: 58 VQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEY-AITP 114 Query: 175 SLVARLEYRASK 186 + RLEY+ + Sbjct: 115 EIATRLEYQWTN 126 >gi|254230148|ref|ZP_04923543.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262394952|ref|YP_003286806.1| outer membrane protein A [Vibrio sp. Ex25] gi|151937341|gb|EDN56204.1| outer membrane protein OmpA [Vibrio sp. Ex25] gi|262338546|gb|ACY52341.1| outer membrane protein A precursor [Vibrio sp. Ex25] Length = 320 Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 32/163 (19%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + ++ F GY + + VE Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEAGFD------NIGD 73 Query: 111 HSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 + GG + + +++ + LY VG G+ +G Sbjct: 74 FNQTSFGGHVEAITLAPKFSLPITEDIALYGKVGGAY-----VMFDGKDDYSYLG---AA 125 Query: 166 GVEVGGLSESLVARLEYR-ASKYSK--VEGFYNTISLGVGMKF 205 G+E LS+++ AR EY+ + S NT +LGV KF Sbjct: 126 GLEFN-LSQNVTARAEYQTLTDISNDVTRATGNTATLGVSFKF 167 >gi|113475637|ref|YP_721698.1| peptidase-like protein [Trichodesmium erythraeum IMS101] gi|110166685|gb|ABG51225.1| peptidase-like [Trichodesmium erythraeum IMS101] Length = 1594 Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 52 DFNGPYAGLSALYNGSFGEEAHHNAGGSIFAG----YNVEDSCIMYGVEGDVRYTVPVLA 107 D++G ++ S + G G Y + + I+YG +GD + Sbjct: 8 DWSG--TPGDNVWPLSEDNSCNDTLNGR--GGDDKLYASQGNDILYGGDGDDKLYGQQGN 63 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVG---PDVAQKYETGKAGEITPIAIGGTAG 164 D ++ G L GG + LY G + +T G G G Sbjct: 64 DKLYGEQG-NDRLYGNGGRDR-----LYGNGGCDRLHGGRGKDTLNGGAGNDTLNG---G 114 Query: 165 VGVE 168 G + Sbjct: 115 AGKD 118 >gi|332830053|gb|EGK02681.1| hypothetical protein HMPREF9455_00931 [Dysgonomonas gadei ATCC BAA-286] Length = 156 Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 15/135 (11%) Query: 80 IFAGYNVEDSCIMYGVEGDVRYTVP---------VLADNIHSLHGIGGSLRIRGGYEVSD 130 + AGY + GVEG T +N + ++ + + Sbjct: 28 VKAGYQTDYERFGLGVEGRYSITNNLRLAPDFTFYFPNNHLTGLDFNANIHYV--FPIQS 85 Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 LY G + + + G G G + + +E++ S + V Sbjct: 86 GFSLYPLAGVAMVNNRLSFGGYSDSSTDFGVNIGAGGSFD-IGNNGYLNVEFKYS-FQDV 143 Query: 191 EGFYNTISLGVGMKF 205 + I LG G++F Sbjct: 144 DNA--NIMLGYGVRF 156 >gi|297746442|emb|CBI16498.3| unnamed protein product [Vitis vinifera] Length = 389 Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 12/130 (9%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIA----TNRYVPIRHDFNGP 56 M+ + V+S A + A++ V A RG T P ++GP Sbjct: 1 MRSSWADSVVNSAAENVAAGSSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYSGP 60 Query: 57 Y-AGLSALYNGSFGEEAHHNA------GGSIFAGYNVEDSCIMYGVEGDVR-YTVPVLAD 108 A + Y+G+ +++ G G+N + G E +V + V + Sbjct: 61 SSANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGGWNNKSGGWDRGREREVNPFGDDVDTE 120 Query: 109 NIHSLHGIGG 118 + S G Sbjct: 121 KVFSEQENTG 130 >gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703] Length = 363 Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 69/221 (31%), Gaps = 34/221 (15%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 +K+ ++ALA F + A P + G + ++ G G Sbjct: 5 RKMKKTAIALAVALAGFATVAQAAPKDNTWYTGGKLG---------WSQYQNTG--TGGI 53 Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV----PVLADNIHSLHGIG 117 G+ G G F GY + G E + Y P D + Sbjct: 54 YGDQGNDGPTHKDQLGAGAFLGY---QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQ 108 Query: 118 G-SLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV------GVEVG 170 G L + Y ++ L LY +G V + + A GV G E Sbjct: 109 GVQLAAKLSYPIAQDLDLYTRLGGMVWRADSSAFDATTGARANNHDTGVSPLVALGAEY- 167 Query: 171 GLSESLVARLEYRA-SKYSKVEG-----FYNTISLGVGMKF 205 +++ R+EY+ S +S+GV +F Sbjct: 168 AWTKNWATRMEYQWVSNIGDKATVGARPDNGMLSVGVSYRF 208 >gi|300815558|ref|ZP_07095782.1| porin protein, opacity family [Escherichia coli MS 107-1] gi|300531487|gb|EFK52549.1| porin protein, opacity family [Escherichia coli MS 107-1] Length = 249 Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 46/226 (20%) Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGPYAG 59 + + VS+LA+A SAQA AD + + ++ + R++ + Y G Sbjct: 8 MKKIMAVSALAVAGMFSAQALADGNKTGFYVTGKAGTSVVSLSDQRFIDGEGVWADRYKG 67 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VPVLA 107 G++ G I AGY+ + + D +Y Sbjct: 68 ---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSH 118 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA-------------- 151 D++ S + +L + Y+ + + + G A+ ++ Sbjct: 119 DDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRE 177 Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + + G GV ++ + L YR Y Sbjct: 178 SLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSY 222 >gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 361 Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 70/220 (31%), Gaps = 35/220 (15%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++ALASF + AQAA + GG+ V + G Y Sbjct: 1 MKKTAIAVAVALASFATIAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GN 47 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHSLHGI 116 Y G G F GY + G E G ++Y + Sbjct: 48 GYTGVNNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSTSNVADSASFKA 104 Query: 117 GG-SLRIRGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 G L + Y V L +Y +G + G + A +GVE Sbjct: 105 QGIQLAAKLSYPVLPDLDVYTRLGGMVWRADSHAAIGGGDINNDDTGVSPLAAIGVEY-A 163 Query: 172 LSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 + ++ R++Y+ V + +S+G+ +F Sbjct: 164 IDKNWATRVDYQWVSNIGDAGTVGARPDNMLMSVGLSYRF 203 >gi|91225860|ref|ZP_01260829.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01] gi|269965437|ref|ZP_06179556.1| outer membrane protein OmpA [Vibrio alginolyticus 40B] gi|91189510|gb|EAS75786.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01] gi|269829916|gb|EEZ84146.1| outer membrane protein OmpA [Vibrio alginolyticus 40B] Length = 320 Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 32/163 (19%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + ++ F GY + + VE Sbjct: 23 YVGGKMGKSWMEDACVAGQACDKDDSTLGAFVGYEM---NKYFAVEAGFD------NIGD 73 Query: 111 HSLHGIGGSLRI-----RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 + GG + + +++ + LY VG G+ +G Sbjct: 74 FNQTSFGGHVEAITLAPKFSLPITEDIALYGKVGGAY-----VMFDGKDDYSYLG---AA 125 Query: 166 GVEVGGLSESLVARLEYR-ASKYSK--VEGFYNTISLGVGMKF 205 G+E LS+++ AR EY+ + S NT +LGV KF Sbjct: 126 GLEFN-LSQNVTARAEYQTLTDISNDVTRATGNTATLGVSFKF 167 >gi|212703520|ref|ZP_03311648.1| hypothetical protein DESPIG_01565 [Desulfovibrio piger ATCC 29098] gi|212673020|gb|EEB33503.1| hypothetical protein DESPIG_01565 [Desulfovibrio piger ATCC 29098] Length = 218 Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 23/156 (14%) Query: 66 GSFGEEAHHNAGGSIFAGYNVEDSCIM-------YGVEGDVRYTVPVLADNIHSLHGIGG 118 G E + GG++ AGY+ ++ Y + G+ + ++ Sbjct: 49 GGVDEYSQFTLGGALAAGYDFWPQYLVPVRVELEYALRGNSEKSWGSNWGSVDCTWN-SS 107 Query: 119 SLRIRGGYEVSDS--LLLYATVGPDVAQKYE--------TGKAGEITPIAIGGTAGVGVE 168 +L Y+ + + Y G ++ Y + + + + G GV Sbjct: 108 TLFANLYYDFRNDSAFVPYIGAGIGMSFNYLGFDLHRNGSAVSRDESTTNFAWNVGAGVA 167 Query: 169 VGGLSESLVARLEYRASKYSKVEGF----YNTISLG 200 ++++L YR E + I +G Sbjct: 168 YN-VNDALYIDAAYRYVDLGYTEASGALNGDQIKVG 202 >gi|14278420|pdb|1G90|A Chain A, Nmr Solution Structure Of Outer Membrane Protein A Transmembrane Domain: 10 Conformers Length = 176 Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 13/148 (8%) Query: 48 PIRHDF-NGPYAGLSALYNGSF----GEEAHHNAGGSIFAGYNVEDSCIMYGVEG--DVR 100 P + + G G S ++ F G + G F GY V G E D Sbjct: 2 PKDNTWYTGAKLGFSQYHDTGFINNNGPTHENQLGAGAFGGYQV---NPYVGFEMGYDFL 58 Query: 101 YTVPVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYAT-VGPDVAQKYETGKAGEITPIA 158 +P + + G L + GY ++D L +Y G ++ G+ Sbjct: 59 GRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVFRADTKSNVYGKNHDTG 118 Query: 159 IGGTAGVGVEVGGLSESLVARLEYRASK 186 + GVE ++ + RLEY+ + Sbjct: 119 VSPVFAGGVEY-AITPEIATRLEYQFTN 145 >gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 361 Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 68/218 (31%), Gaps = 34/218 (15%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 A+ V+ + AQAA + GG+ V + G Y Y Sbjct: 3 KTAIAVAVALASFATVAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GNGY 49 Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHSLHGIGG 118 G G F GY + G E G ++Y + G Sbjct: 50 TGINNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSTANAADSASFKAQG 106 Query: 119 -SLRIRGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTAGVGVEVGGLS 173 L + Y V L +Y+ +G + G + A VGVE + Sbjct: 107 IQLAAKLSYPVLPDLDVYSRLGGMVWRADSHAAIGGGDINNDDTGVSPLAAVGVEY-AID 165 Query: 174 ESLVARLEYRAS----KYSKVEGFYNTI--SLGVGMKF 205 ++ AR++Y+ V + + S+G+ +F Sbjct: 166 KNWAARVDYQWVSNIGDAGTVGARPDNLLMSVGLSYRF 203 >gi|323971797|gb|EGB67023.1| heat resistant agglutinin 1 [Escherichia coli TA007] Length = 242 Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 71/226 (31%), Gaps = 46/226 (20%) Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIAT---NRYVPIRHDFNGPYAG 59 + + VS+LA+A SAQA AD + + ++ + R++ ++ Y G Sbjct: 1 MKKIMAVSALAVAGMFSAQALADGSKTGFYVTGKAGTSVVSLSDQRFIDGEGEWADRYKG 60 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV---------EDSCIMYGVEGDVRYT---VPVLA 107 G++ G I AGY+ + + D +Y Sbjct: 61 ---------GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSH 111 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA-------------- 151 D++ S + +L + Y+ + + + G A+ ++ Sbjct: 112 DDLKSEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRE 170 Query: 152 ---GEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + + G GV ++ + L YR Y Sbjct: 171 SLSHSDSADNFAWSLGAGVRYD-VTPDIALDLSYRYIDAGDSSVSY 215 >gi|299533012|ref|ZP_07046399.1| Opacity protein-like surface antigen [Comamonas testosteroni S44] gi|298719236|gb|EFI60206.1| Opacity protein-like surface antigen [Comamonas testosteroni S44] Length = 223 Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 25/148 (16%) Query: 69 GEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS--------- 119 G+E++ GGS+ GY + + + VE + YT+P + S Sbjct: 54 GDESNTATGGSLALGYQLPSN---WRVEAE--YTLPKNNEFTSGSTRFPTSFNHHQIRSQ 108 Query: 120 ---LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEV 169 + + ++ LY G +A+ +G G T + + G GV Sbjct: 109 RLMVNAYKDFPLNSQFSLYGMAGLGLARLESSGWQGNPGRQYISDTQNNLAYSVGFGVSY 168 Query: 170 GGLSESLVARLEYRASKYSKVEGFYNTI 197 + + L L +R K + N Sbjct: 169 SPV-QKLSIDLGWRYVDMGKAKSGANNF 195 >gi|319776591|ref|YP_004139079.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3047] gi|317451182|emb|CBY87415.1| outer membrane protein p5 precursor (omp p5) [Haemophilus influenzae F3047] Length = 348 Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYN-VEDSCIMYGVE---GDVRY 101 + G AG ++ +NG + H+AG +F GY + + + VE D Sbjct: 29 YAGVKAGQASFHNGVRAQARKHDAGYHRNSFTYGVFGGYQILNQNNLGLAVELGYDDFGR 88 Query: 102 TVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEITP 156 + H G+ L ++G YEV + L +Y G + + Y + Sbjct: 89 AKGRREGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYPVDDHKDGHR 148 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYN------------TISLGVGM 203 + G VG E L E L RLEY+ ++ K N +I+ G+ Sbjct: 149 VRASGLFAVGAEYAVLPE-LAVRLEYQWLTRVGKYRPQDNPNSAINYTPWIGSINAGISY 207 Query: 204 KF 205 +F Sbjct: 208 RF 209 >gi|217971759|ref|YP_002356510.1| OmpA domain-containing protein transmembrane region-containing protein [Shewanella baltica OS223] gi|217496894|gb|ACK45087.1| OmpA domain protein transmembrane region-containing protein [Shewanella baltica OS223] Length = 192 Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 53/166 (31%), Gaps = 21/166 (12%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 NG Y G + Y G++ + I GY + G G V + + + Sbjct: 34 NGIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEG--GYVNFGDYGNSLSNA 91 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVG--PDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 G +L + Y + D + LYA G G +G G G GV Sbjct: 92 ETDGYTAAL--KVSYPIVDRVELYAKGGQLWYSTDYDVLGFSGNKDDE--GVFVGAGV-A 146 Query: 170 GGLSESLVARLEYRASKYS----------KVEGFYNTISLGVGMKF 205 +++ + EY + + SLGV +F Sbjct: 147 FKVTDRFLINAEYTWYDAGITVENVSNGADTDTDFKQASLGVEYRF 192 >gi|88861307|ref|ZP_01135938.1| outer membrane protein A [Pseudoalteromonas tunicata D2] gi|88816686|gb|EAR26510.1| outer membrane protein A [Pseudoalteromonas tunicata D2] Length = 358 Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 58/187 (31%), Gaps = 28/187 (14%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNG-------SFGEEAHHNAGGSIFAGYNVEDSCIM 92 + +FN Y G S + S+F GY + Sbjct: 26 AAHSEEAQADNFNFNNWYVGGEFGRKRQDDLCKKSLSSCDSSDNAWSVFFGYEFSKHWAL 85 Query: 93 YGVEGDVR-YTVPVLADNIHS-------LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 G D+ Y+ L + + + G R+ +++ L+ +G Sbjct: 86 EGGYTDLGEYSTTGLVNGLTNHAVTSMTGLEFAGVFRM----PLTEQAGLFTKLGAMYYD 141 Query: 145 KYETGKAGEITPIAIGGTA--GVGVEVGGLSESLVARLEYRA-SKYSKVE---GFYNTIS 198 E + G +A G+G+ +++L R+EY E + + Sbjct: 142 GEEKNSIAKFDDK--GWSALFGLGLSYD-FTQNLQGRVEYNFLHDLGDSEFAGDHGHLTT 198 Query: 199 LGVGMKF 205 LG+ +F Sbjct: 199 LGLAYRF 205 >gi|329124105|ref|ZP_08252652.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116] gi|327467530|gb|EGF13028.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116] Length = 348 Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGG-------SIFAGYN-VEDSCIMYGVE---GDVRY 101 + G AG ++ +NG + H+AG +F GY + + + VE D Sbjct: 29 YAGVKAGQASFHNGVRAKAREHDAGYHRNSFTYGVFGGYQILNQNNLGLAVELGYDDFGR 88 Query: 102 TVPVLADNIHSLHGIGGS-LRIRGGYEVSDSLLLYATVGPDVAQK----YETGKAGEITP 156 + H G+ L ++G YEV + L +Y G + + Y + Sbjct: 89 AKGRKEGRTVAKHTNHGTHLSLKGSYEVLNGLDVYGKAGVALVRSDYKFYPVDNHKDGHR 148 Query: 157 IAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYN------------TISLGVGM 203 + G VG E L E L RLEY+ ++ K N +I+ G+ Sbjct: 149 VRASGLFAVGAEYAVLPE-LAVRLEYQWLTRVGKYRPQDNPNSAINYTPWIGSINAGISY 207 Query: 204 KF 205 +F Sbjct: 208 RF 209 >gi|226344175|gb|ACO48710.1| OmpA [Escherichia coli] Length = 153 Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 16/132 (12%) Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV-------PVLADNIHSLHG 115 + + G + G F GY V G E + Y + + + G Sbjct: 3 GFINNNGPTHENQLGAGAFGGYQV---NPYVGFE--MGYDWLGRMPYKGSVKNGAYKAQG 57 Query: 116 IGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKA-GEITPIAIGGTAGVGVEVGGLSE 174 + L + GY ++D L +Y +G V + G+ + GVE ++ Sbjct: 58 VQ--LTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEY-AITP 114 Query: 175 SLVARLEYRASK 186 + RLEY+ + Sbjct: 115 EIATRLEYQWTN 126 >gi|261377935|ref|ZP_05982508.1| surface protein A [Neisseria cinerea ATCC 14685] gi|269145795|gb|EEZ72213.1| surface protein A [Neisseria cinerea ATCC 14685] Length = 192 Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 36/178 (20%) Query: 55 GPYAGLSALYNG-----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109 G Y ++ G+ + + AGY+ D + V D YT + Sbjct: 24 GFYVQGDLGHSTLKTSDEGGKVSSKGFSPRLSAGYDFGD----FRVAAD--YTHYKTRKD 77 Query: 110 IHSLHGIGGSLRIRG---------GYEVSDSLLLYATVGPDVAQKYETGKAGEI------ 154 +I+ ++++ + Y + + Sbjct: 78 HEQGPSYTLDSKIKLQSVGVSAIYDFDLNSPVKPYVGARVGLNRFSYDDDDRREGYHATE 137 Query: 155 ----TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY---NTISLGVGMKF 205 T +G GVG + +++++ YR + + +G + +S GV +KF Sbjct: 138 TFRKTKTGLGVMTGVGYD---ITQNVALDAGYRYNHWGNFDGIKVHTHEVSAGVRVKF 192 >gi|90418982|ref|ZP_01226893.1| putative outer surface protein [Aurantimonas manganoxydans SI85-9A1] gi|90337062|gb|EAS50767.1| putative outer surface protein [Aurantimonas manganoxydans SI85-9A1] Length = 337 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 36/130 (27%), Gaps = 15/130 (11%) Query: 3 KLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 +L V + + A+AAD + + P + Y Sbjct: 7 RLLTTVALIGAVSSFSSFAKAADIIEEQPY----FPPPAPVIVEEVATGGW---YLRGDV 59 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 Y + +++ D + G++ Y L ++ + G Sbjct: 60 GYVFKSKTDGYYDFYNIGNTSPEAYDDDWVRGIDSTEHYDEISLKNSANFSIG------- 112 Query: 123 RGGYEVSDSL 132 GY VSD Sbjct: 113 -AGYRVSDHF 121 >gi|18307546|emb|CAD21163.1| putative invasin [Salmonella enterica IIIb 50:k:z] Length = 239 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 GG + GY+ D + E D + + A + + Sbjct: 60 NRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDITAFGEPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQ----------KYETGKAGEITPIAIGGTA 163 R + G Y+ +S Y + G +A+ Y+ + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLARVKLKNNTIPVGYDINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + +++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIAIDASYKYINAGKVSISKN 210 >gi|27366989|ref|NP_762516.1| outer membrane protein A [Vibrio vulnificus CMCP6] gi|37676767|ref|NP_937163.1| outer membrane protein [Vibrio vulnificus YJ016] gi|27358557|gb|AAO07506.1| Outer membrane protein A precursor [Vibrio vulnificus CMCP6] gi|37201310|dbj|BAC97133.1| outer membrane protein [Vibrio vulnificus YJ016] Length = 357 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 28/174 (16%) Query: 47 VPIRHDFNGPYAGLSALYNG-----SFGEEAHHNAGG-SIFAGYNVEDS-----CIMYGV 95 ++ Y G Y ++ G ++ GYN I Sbjct: 20 ATANAAWSDLYFGGKIGYVNLDDACYVSSPCDDDSAGFGLYYGYNFSKHISAELGIDLLG 79 Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 E + ++ ++ + + +L + +++ L +A +G Y + Sbjct: 80 EHETNFSNGYFSEAKLAAY----TLAPKFSLPLNEKLDAFAKIGAA----YMIYGDDKDL 131 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSK---VEGFYNTISLGVGMKF 205 T +G+E L+ES AR EY R S + N +G+ F Sbjct: 132 VP----TGSLGLEY-ALTESFKARAEYQRYQDMSDDIVKDMDANFFGIGITYLF 180 >gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380] gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380] Length = 358 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 59/194 (30%), Gaps = 38/194 (19%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86 + P + + Y G ++ G+ G + G F GY Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQDTGTGGIYGDLGNDGPTHKNQLGAGAFLGY-- 70 Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPD 141 + G E + Y P D + G L + Y V+ L LY +G Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDTRNGDFKAQGVQLAAKLSYPVAQDLDLYTRLGGL 127 Query: 142 VAQK------YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVE 191 V + E+G + +G E +++ R+EY+ V Sbjct: 128 VWRADSSAFDAESGARSSNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKGTVG 186 Query: 192 GFYNTISLGVGMKF 205 + L VG+ + Sbjct: 187 ARPDNGMLSVGVSY 200 >gi|323143404|ref|ZP_08078089.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066] gi|322416809|gb|EFY07458.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066] Length = 329 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 16/138 (11%) Query: 56 PYAGLSALY----NGSFGEEAHHNAGG-SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G+ + N + +A G I+AGYN+ +E Y A ++ Sbjct: 28 AYVGVRGGWAHMDNVDWASADDKDAVGYGIYAGYNLTS---WAAIEAGYNYFDGFSAKDV 84 Query: 111 HSLHGI---GGSLRIRGGYEV-SDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 H G +R + + D +Y G A G G Sbjct: 85 EGSHDFDVHGPEAALRLAFPLGPDGSDIYVRGGAFWATTKVEHGISNHEIAPF---VGAG 141 Query: 167 VEVGGLSESLVARLEYRA 184 V+ ++++ R+ Y Sbjct: 142 VQY-AVTKNFGVRVGYDY 158 >gi|294671107|ref|ZP_06735962.1| hypothetical protein NEIELOOT_02815 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307215|gb|EFE48458.1| hypothetical protein NEIELOOT_02815 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 193 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 58/183 (31%), Gaps = 29/183 (15%) Query: 47 VPIRHDFNGPYAGLSALYNG-----SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY 101 V + D G Y ++ G+ + + AGY+ D + V D + Sbjct: 16 VALADDNRGFYVQGDLGHSTIKTKDDGGKGSAKGFSPRLSAGYDFGD----FRVAADYIH 71 Query: 102 TVPVLADNIHSLHGIGGSLRIRG-------GYEVSDSLLLYATVGPDVAQKYETGK---- 150 + L+ ++ + ++++ + Y + + + Sbjct: 72 YKTLKEHKRDPLYTFDAKIKFQSFGVSAIYDFDLNSPVKPYVGARLGLNRISYSDDFRGT 131 Query: 151 -----AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF---YNTISLGVG 202 G GV +++++ YR + + K +G + +S GV Sbjct: 132 TGYHETESFRKTKAGVGVMAGVGYD-ITQNVALDAGYRYNHWGKFDGLKVHSHEVSAGVR 190 Query: 203 MKF 205 +KF Sbjct: 191 VKF 193 >gi|261856194|ref|YP_003263477.1| hypothetical protein Hneap_1600 [Halothiobacillus neapolitanus c2] gi|261836663|gb|ACX96430.1| conserved hypothetical protein [Halothiobacillus neapolitanus c2] Length = 241 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 44/134 (32%), Gaps = 16/134 (11%) Query: 2 QKLFLAVGVSSLALASFCSAQAADP----VRRAHHGGRGVVPTIATNRYVPIRHDF---- 53 + L L ++L L +A AD + A + + ++ F Sbjct: 4 KILTLLTVATALNLPVISAAVQADTFTGNINVASKYILRGITNSPEDDNAALQGGFDYSL 63 Query: 54 -NGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHS 112 NG Y G G + + GYN YGV G V+Y NI + Sbjct: 64 DNGLYVGYWGSSLGYSDPGKSNGFENDFYGGYNGSIGDFHYGV-GVVQYAYV----NISN 118 Query: 113 LHGIGGSLRIRGGY 126 +GI G GY Sbjct: 119 SNGIEGY--GSVGY 130 >gi|320158865|ref|YP_004191243.1| outer membrane protein A [Vibrio vulnificus MO6-24/O] gi|319934177|gb|ADV89040.1| outer membrane protein A precursor [Vibrio vulnificus MO6-24/O] Length = 357 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 28/174 (16%) Query: 47 VPIRHDFNGPYAGLSALYNG-----SFGEEAHHNAGG-SIFAGYNVEDS-----CIMYGV 95 ++ Y G Y ++ G ++ GYN I Sbjct: 20 ATANAAWSDLYFGGKIGYVNLDDACYVSSPCDDDSAGFGLYYGYNFSKHISAELGIDLLG 79 Query: 96 EGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEIT 155 E + ++ ++ + + +L + +++ L +A +G Y + Sbjct: 80 EHETNFSNGYFSEAKLAAY----TLAPKFSLPLNEKLDAFAKIGAA----YMIYGDDKDL 131 Query: 156 PIAIGGTAGVGVEVGGLSESLVARLEY-RASKYSK---VEGFYNTISLGVGMKF 205 T +G+E L+ES AR EY R S + N +G+ F Sbjct: 132 VP----TGSLGLEY-ALTESFKARAEYQRYQDMSDDIVKDMDANFFGIGITYLF 180 >gi|332878582|ref|ZP_08446302.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683483|gb|EGJ56360.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 290 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 5/103 (4%) Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138 S+ GY + + + G + T ++ +G G ++RGGY + L + Sbjct: 25 SLSGGYGFQSNQKVVGRDA----TNIAAVSDLKGSYGEGYQAQLRGGYFFTKRLGAELAL 80 Query: 139 GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG-LSESLVARL 180 G T K + A G G + ++++L R Sbjct: 81 GYLHGGDIATNKNQILDMTAHGRAFGASLSAVFNITDNLYVRA 123 >gi|160899400|ref|YP_001564982.1| opacity protein and related surface antigens-like protein [Delftia acidovorans SPH-1] gi|160364984|gb|ABX36597.1| Opacity protein and related surface antigens-like protein [Delftia acidovorans SPH-1] Length = 268 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 61/207 (29%), Gaps = 37/207 (17%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGE 70 ++L L + SA AAD A + G G+ Sbjct: 53 TALILTASGSALAADNFYGAVRINSANYKAHDMDSSARPG-------LGQFV-----PGD 100 Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS----------- 119 ++ GGS+ GY + + +E + YT+P + S Sbjct: 101 DSRRATGGSLALGYQLPSD---WRLEAE--YTLPRSNEFTSGSTRFPTSFNHHSIRSQRL 155 Query: 120 -LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-------EITPIAIGGTAGVGVEVGG 171 + + ++ +Y T G +A +G G + + G GV Sbjct: 156 MINAYKDFPLNAQFSVYGTAGLGLAHLQSSGWQGNPNRQYFSDSQNNLAYALGFGVSYSP 215 Query: 172 LSESLVARLEYRASKYSKVEGFYNTIS 198 + + + L YR K N + Sbjct: 216 I-QKVSIDLGYRYVGMGKTHSGANNFT 241 >gi|222054709|ref|YP_002537071.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221563998|gb|ACM19970.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 474 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 11/127 (8%) Query: 59 GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY--TVPVLADNIHSLHGI 116 G+ Y + + GYN +GVEG Y T AD + + Sbjct: 36 GIIGGYTFDGRQHIETRPVYGVRGGYNFTKH---WGVEGLFDYARTESTRADQDINFYRY 92 Query: 117 GGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESL 176 GG + + + + L+ Y G V + ++ A G L++ L Sbjct: 93 GGEVLLHVFPD--NKLVPYLAAGY-VGLTRDPEGQHTVSKGAFDYGIGA---KYFLTDDL 146 Query: 177 VARLEYR 183 R ++R Sbjct: 147 ALRADFR 153 >gi|218260204|ref|ZP_03475597.1| hypothetical protein PRABACTJOHN_01258 [Parabacteroides johnsonii DSM 18315] gi|218224691|gb|EEC97341.1| hypothetical protein PRABACTJOHN_01258 [Parabacteroides johnsonii DSM 18315] Length = 172 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 19/154 (12%) Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVED-SCIMYGVEGDVRY------------TVPVL 106 L+ G++ + + GYN D G+ D RY T V Sbjct: 22 LTLFSIGAYAQTQQGQSSFGFNLGYNFNDIGNATIGI--DYRYCVTDAFRLTPSITHFVK 79 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVG 166 D +++ + +++S+ Y G ++ + + G G+G Sbjct: 80 NDGLNA---WAIDMNAHYVFKLSEMFGFYPLAGLSLSFWKASVGNFSVNETRFGANIGLG 136 Query: 167 VEVGGLSESLVARLEYRASKYSKVEGFYNTISLG 200 EV ++ + LE + + ++ + +G Sbjct: 137 GEVYA-TDRISVGLEAKYNIIKDLDAAALAVRVG 169 >gi|260172756|ref|ZP_05759168.1| hypothetical protein BacD2_12886 [Bacteroides sp. D2] gi|315921044|ref|ZP_07917284.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694919|gb|EFS31754.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 1090 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%) Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100 + + + G Y L A + FG S G+ + + M G +R Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651 Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 + +N + + Y + ++++ + +K + A Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIEGEGTKGLVRKKLSNDKLHWESTA-- 702 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 T +G++ G + L ++Y +KY+ ++ + L +G+ Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743 >gi|168232259|ref|ZP_02657317.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470699|ref|ZP_03076683.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457063|gb|EDX45902.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333400|gb|EDZ20164.1| putative outer membrane adhesin [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 239 Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 60 DRTKGVFGGGVAIGYDFYDPFQLPVRLELGTTFRGETDAKGGQDIIAFGQPVHINVKNQV 119 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 120 RMTTYMVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 179 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 180 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 210 >gi|88798412|ref|ZP_01113997.1| OmpA/MotB [Reinekea sp. MED297] gi|88778852|gb|EAR10042.1| OmpA/MotB [Reinekea sp. MED297] Length = 373 Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 58/199 (29%), Gaps = 28/199 (14%) Query: 6 LAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY- 64 +G++S+ + S A V + +G Y G Sbjct: 2 SLIGLTSVHTFAHDSIAAQMVVADPELVWKAWDAEEDGPLETADAQFKSGWYVGGGTGLT 61 Query: 65 -------NGSFGEEAHHNAGGSIFAGYNVEDS-----CIMYGVEGDVRYTVPVLADNIHS 112 +G F E + G +FAG+ +Y E + P +AD+I Sbjct: 62 EVSPEGSSGGFYVEDDRDWGYKVFAGWRFMSHWGAEISYVYTGEAGLGNVNPAIADDIAD 121 Query: 113 LH--------GIGGSLRIRGGYEVSDSLLLYATVGP-DVAQKYETGKAGEITPIAIGGTA 163 LR L ++ VG + + + Sbjct: 122 ATIRYQIPTMAASYYLRG-----AEHPLDVFGRVGLSAITNSVSDDRIPYEKQTPVQLNL 176 Query: 164 GVGVEVGGLSESLVARLEY 182 G+GVE ++E+ AR Y Sbjct: 177 GIGVEWR-INETWFARAAY 194 >gi|254429747|ref|ZP_05043454.1| hypothetical protein ADG881_2977 [Alcanivorax sp. DG881] gi|196195916|gb|EDX90875.1| hypothetical protein ADG881_2977 [Alcanivorax sp. DG881] Length = 326 Score = 36.6 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 5/97 (5%) Query: 67 SFGEEAHHNAGGSIFA--GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRG 124 + + + G ++ + G++G++ Y V A+N H GG R Sbjct: 161 GWDNQLGTDLIGGVYFINARRFQQFQWDSGLQGELGYAWGVDANNFHGTATAGGF--FRL 218 Query: 125 GYEVSDSLLL-YATVGPDVAQKYETGKAGEITPIAIG 160 G + + + YA +G + +G +G Sbjct: 219 GRNLPRNFIPDYAGIGTAGSLVGLFDGSGFGWEAFVG 255 >gi|21673352|ref|NP_661417.1| tia invasion determinant-related protein [Chlorobium tepidum TLS] gi|21646447|gb|AAM71759.1| tia invasion determinant-related protein [Chlorobium tepidum TLS] Length = 219 Score = 36.6 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 66/217 (30%), Gaps = 25/217 (11%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K + +++ A +A ADP+ + GG ++ N Sbjct: 1 MKKYAITSIAAAMLSAPAITA-TADPLYISLSGGLNLMSNSDAKVSDTETSIKNAVEYKR 59 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYG-------VEGDVRYTVPVLADNIHSL 113 G+FGE+ G I GY D + G E D + V A + + Sbjct: 60 GYALEGAFGEKT-GVFRGEIAVGYQSSDVDKVLGSDIVEQLGEIDNYEDLTVTASALTVM 118 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVA--------QKYETGKAGEITPIAIGGTAGV 165 + + Y++ L Y G A + G Sbjct: 119 YNVYAD------YDMKGILSPYLMGGLGAAFVDMGTSFKVDGVEYDSSYDKTVFAWQLGA 172 Query: 166 GVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVG 202 G+ ++ ++ L YR K ++ N L G Sbjct: 173 GL-GIKITNNVALDLGYRYFKTGDLD-LENKTKLSFG 207 >gi|326482405|gb|EGE06415.1| hypothetical protein TEQG_05419 [Trichophyton equinum CBS 127.97] Length = 2219 Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 37/131 (28%), Gaps = 26/131 (19%) Query: 39 PTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGD 98 P + + V + P G+S FG E + G F G+ G E D Sbjct: 359 PAPSAFQDVSLDDGAAAPQIGMS------FGGEDTKGSTGFSFGGWG---KDWNTGGELD 409 Query: 99 VRYTVPVLADNIHSLHGIG--------GSLRIRGGYEVSDSLLLYATVGPDVAQKYETGK 150 + D ++ G GS G+E + G D G Sbjct: 410 LGANGDTKDDGLNPWGGTSKKNKKNSTGSDAFDFGFESN---------GLDGKNADPAGD 460 Query: 151 AGEITPIAIGG 161 AG + Sbjct: 461 AGADKEPEVSW 471 >gi|117625198|ref|YP_854245.1| tia invasion determinant [Escherichia coli APEC O1] gi|218559962|ref|YP_002392875.1| Tia invasion determinant [Escherichia coli S88] gi|218702439|ref|YP_002410068.1| Tia invasion determinant [Escherichia coli IAI39] gi|218702831|ref|YP_002410460.1| Tia invasion determinant [Escherichia coli IAI39] gi|300824790|ref|ZP_07104894.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7] gi|70608343|gb|AAZ04415.1| Tia invasion determinant [Escherichia coli] gi|115514322|gb|ABJ02397.1| Tia invasion determinant [Escherichia coli APEC O1] gi|218366731|emb|CAR04490.1| Tia invasion determinant [Escherichia coli S88] gi|218372425|emb|CAR20299.1| Tia invasion determinant [Escherichia coli IAI39] gi|218372817|emb|CAR20696.1| Tia invasion determinant [Escherichia coli IAI39] gi|300522697|gb|EFK43766.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7] gi|315286986|gb|EFU46401.1| OmpA-like transmembrane domain protein [Escherichia coli MS 110-3] Length = 251 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 44/231 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59 M ++ + VS+LA+A SAQA AD + + ++ T R DF Sbjct: 1 MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDF------ 54 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110 +Y G++ G + GY+ + + YG D YT+ + Sbjct: 55 GDDVYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPM 114 Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160 R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGE 174 Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 VSDISALHYSGYDNNFAWSIGAGVRYD-ITPDIALDLSYRYLDAGKSSLSY 224 >gi|290543553|ref|NP_001166524.1| cytokine receptor common subunit beta [Cavia porcellus] gi|3882358|gb|AAC77520.1| interleukin-5 receptor beta chain [Cavia porcellus] Length = 890 Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 1/42 (2%) Query: 19 CSAQAADPVRRAHHGGRGVVP-TIATNRYVPIRHDFNGPYAG 59 + A+D + + P DFNGPY G Sbjct: 558 STPAASDLTQEQPPSVQPGPPVPQDQPGDQLATFDFNGPYLG 599 >gi|261213962|ref|ZP_05928243.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] gi|260915569|gb|EEX82430.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya] Length = 75 Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 21/77 (27%), Gaps = 4/77 (5%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+ L V + SL LAS V+ V +NG Y G Sbjct: 1 MECLEGTVNIKSLLLASTVVL----VAATGAKAADAVIEQEPAPVVVAPTFTWNGAYLGG 56 Query: 61 SALYNGSFGEEAHHNAG 77 Y + + Sbjct: 57 QIGYGWGRSTLSDEDTS 73 >gi|149911546|ref|ZP_01900160.1| Outer membrane protein [Moritella sp. PE36] gi|149805391|gb|EDM65401.1| Outer membrane protein [Moritella sp. PE36] Length = 193 Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 21/148 (14%) Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSAL-------YNGSFGEEAHHNAGGSIFAGYNVED 88 G + IA + V D +G Y G NG + + GY Sbjct: 8 GALTAIALSVNVQANQDVSGFYLGAGVGTTNVDTDTNGYSSNSDTDGSTVKLLGGYQF-- 65 Query: 89 SCIMYGVEGDV----RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 + +E T + SL GY + L +AT+G Sbjct: 66 -NRIVAIEAQYTKYGDITPLSNFSKTYQWSPTTVSLAANLGYTFENGLRPFATIGLSSLD 124 Query: 145 KYETGKAGEITPIAIGGTA---GVGVEV 169 E+ K + + TA G G+E Sbjct: 125 LDESIKTIDDSSA----TALRFGAGLEY 148 >gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305] gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305] Length = 372 Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 54/203 (26%) Query: 56 PYAGLSALYNG---SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRY-TVPVLADNIH 111 YAG A + F + + GY + + + YGV G + Sbjct: 26 FYAGAKAGWANFRDGFTQFESSQENPKLNNGYGINKNTVTYGVFGGYQILNQNNFGLAAE 85 Query: 112 SLHGIGGSLRI-------------------------RGGYEVSDSLLLYATVGPDVAQK- 145 + G R + YEV +L +Y VG + + Sbjct: 86 LGYDYFGRARGNTTFAGEDREKVAAKHTAHGAHLSLKPSYEVIPNLDVYGKVGVALIRND 145 Query: 146 -YETGKAGEITPIAI-----GGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEG------ 192 + + + T G GVE L E L AR+EY+ +K ++ Sbjct: 146 YFVQSTPVKGKRTKVHTLKPSLTLGAGVEYAILPE-LAARIEYQYVNKVGNLDKAARKAD 204 Query: 193 ----------FYNTISLGVGMKF 205 +++S G+ +F Sbjct: 205 KQGTNYQFSPDLHSVSAGLSYRF 227 >gi|301020993|ref|ZP_07185044.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1] gi|300398367|gb|EFJ81905.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1] Length = 251 Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 44/231 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAG 59 M ++ + VS+LA+A SAQA AD + + ++ T R DF Sbjct: 1 MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDF------ 54 Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNI 110 +Y G++ G + GY+ + + YG D YT+ + Sbjct: 55 GDDVYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPM 114 Query: 111 HSLHGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG- 160 R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGE 174 Query: 161 -----------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 VSDISALHYSGYDNNFAWSIGAGVRYD-ITPDIALDLSYRYLDAGKSSLSY 224 >gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909] gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909] Length = 358 Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 39/185 (21%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86 + P + + Y G ++ G+ G + G F GY Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQDTGTGGIYGDVGNDGPTHKNQLGAGAFLGY-- 70 Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG-- 139 + G E + Y P D + G L + Y V+ L LY +G Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVNNGAFKAQGVQLAAKLSYPVAQDLDLYTRLGGM 127 Query: 140 -PDVAQKYETGKAGEITP---IAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 + + +G E +++ R+EY+ V + Sbjct: 128 VWRADSSAYDAPTDTRSSNHDTGVSPLVALGAEY-AWTKNWATRMEYQW-----VSNIGD 181 Query: 196 TISLG 200 ++G Sbjct: 182 RATVG 186 >gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer membrane protein II gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii] Length = 238 Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG-EITPIAIGGTAGVGVEVGGLSESLVA 178 L + GY ++D L +Y +G V + G + + GVE ++ + Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADAKNNEGFKDHDTGVSPVFAGGVEY-AITPEIAT 59 Query: 179 RLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205 RLEY+ + + V G + +S+GV +F Sbjct: 60 RLEYQWTNNIGDANTVGGRPDNGLLSVGVSYRF 92 >gi|253989527|ref|YP_003040883.1| outer membrane protein x [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780977|emb|CAQ84139.1| outer membrane protein x precursor [Photorhabdus asymbiotica] Length = 176 Score = 36.2 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 10/158 (6%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 +G YA Y+G+ + ++ Y ++D + G Y Sbjct: 26 STISGGYAQGHVKYDGNKSNKDTKGF--NLKYRYELDDHFSVIGSATYTGYDFKYGDPKP 83 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYET---GKAGEITPIAIGGTAGVGV 167 L SL Y ++ + +Y VG E + + ++ G G+ Sbjct: 84 TKLDMDYYSLMAGPSYRFNEYVSVYGLVGAAHVHGKEDVFASGSRKKEKTSVSY--GAGL 141 Query: 168 EVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 + + +L Y SK ++ + GVG +F Sbjct: 142 QFNPI-PNLAIDASYEYSKLGDLKVGTWVV--GVGYRF 176 >gi|289809872|ref|ZP_06540501.1| outer membrane adhesin [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 222 Score = 36.2 bits (82), Expect = 3.0, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 27/152 (17%) Query: 70 EEAHHNAGGSIFAGYNVEDS---------CIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + GY+ D + E D + ++A + + Sbjct: 43 DRTKGVFGGGVAIGYDFYDPFQLPVRLELDTTFRGETDAKGGQDIIAFGQPVHINVKNQV 102 Query: 121 R-----IRGGYEVSDS--LLLYATVGPDVAQKYETGKA----------GEITPIAIGGTA 163 R + G Y+ +S Y + G +A + + A Sbjct: 103 RMTTYIVNGYYDFHNSTAFTPYISAGVGLAHVKLSNNTIPVGFGINETLSASKNNFAWGA 162 Query: 164 GVGVEVGGLSESLVARLEYRASKYSKVEGFYN 195 G+G + ++++++ Y+ KV N Sbjct: 163 GIGAKY-AVTDNIMIDASYKYINAGKVSISKN 193 >gi|299145119|ref|ZP_07038187.1| putative outer membrane protein probably involved in nutrient binding [Bacteroides sp. 3_1_23] gi|298515610|gb|EFI39491.1| putative outer membrane protein probably involved in nutrient binding [Bacteroides sp. 3_1_23] Length = 1090 Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%) Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100 + + + G Y L A + FG S G+ + + M G +R Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651 Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 + +N + + Y + ++++ + +K + A Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIDGEGTKGLVRKKLSNDKLHWESTA-- 702 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 T +G++ G + L ++Y +KY+ ++ + L +G+ Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743 >gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114] gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114] Length = 324 Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 40/140 (28%), Gaps = 22/140 (15%) Query: 57 YAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT---VPVL 106 Y G + G E ++ GG ++ GY + G D V Sbjct: 21 YLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSWFALEGSWHDYGSPKTFYGVG 80 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAI 159 + G+ S+ + V+D+L LYA G G + I Sbjct: 81 DGYYSNATGVDLSV--KLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDSSIDD 138 Query: 160 GGTAGVGVEVGGLSESLVAR 179 G L+ + R Sbjct: 139 IWEIGA---EYALAPNWSLR 155 >gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043] gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043] Length = 366 Score = 36.2 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 73/225 (32%), Gaps = 40/225 (17%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++ALASF + AQAA + GG+ V + G Y Sbjct: 1 MKKTAIAVAVALASFATIAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GN 47 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE------GDVRYTVPVLADNIHSLHGI 116 Y G G F GY + G E G ++Y +++ + Sbjct: 48 GYTGVNNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSTASNDDSASFKA 104 Query: 117 GG-SLRIRGGYEVSDSLLLYATVG---------PDVAQKYETGKAGEITPIAIGGTAGVG 166 G L + Y V L +Y +G + T + A +G Sbjct: 105 QGIQLAAKLSYPVMPDLDVYTRLGGMVWRADSHAATSVNTGTRADINNDDTGVSPLAAIG 164 Query: 167 VEVGGLSESLVARLEYRAS----KYSKVEGFYNTI--SLGVGMKF 205 VE + ++ R++Y+ V + + S+G+ +F Sbjct: 165 VEY-AIDKNWATRVDYQWVSNIGDAGTVGARPDNLLMSVGLSYRF 208 >gi|304394025|ref|ZP_07375948.1| hypothetical protein R2A130_1652 [Ahrensia sp. R2A130] gi|303293465|gb|EFL87842.1| hypothetical protein R2A130_1652 [Ahrensia sp. R2A130] Length = 452 Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 46/142 (32%) Query: 103 VPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPD--VAQKYETGKAGE---- 153 V + S G GS R R Y++ + L + +VG A + G Sbjct: 171 DGVADPDDESDFGFTGSSRFRVEYDIPTNPGDYLFFQSVGATNIFADGDQADFLGSQQKA 230 Query: 154 -----------------------ITPIAIGGTAGVGVEVGG-LSESLVARLEYRA----- 184 G GV+ LS+++ A +YRA Sbjct: 231 GVVFNGRTFIVSPYIHYGTTWLQDDRFRNQW--GAGVDTSFALSDTVTALAKYRASYEDY 288 Query: 185 --SKYSKV----EGFYNTISLG 200 + +S + +G+ + + G Sbjct: 289 RVTDFSTIGSQRDGWRHEVRAG 310 >gi|189464864|ref|ZP_03013649.1| hypothetical protein BACINT_01208 [Bacteroides intestinalis DSM 17393] gi|189437138|gb|EDV06123.1| hypothetical protein BACINT_01208 [Bacteroides intestinalis DSM 17393] Length = 838 Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 42/151 (27%), Gaps = 34/151 (22%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 MQK ++ + LA+ FC +QAAD P++ P ++ PY L Sbjct: 1 MQKQMKSLFTTMLAIGLFCQSQAADL-FTPVQKTELRAPSVPLITSDPYLSIWS-PYDKL 58 Query: 61 SALYNGSFGEEAHHNAG-----GSIF---------------------AGYNVEDSCIMYG 94 + + H G G ++ Y + G Sbjct: 59 NEGSTEHWTGTEHPLIGAVRVDGKVYRFMGKQTLEAILPMVEDEIWEGNYTFQQP---AG 115 Query: 95 VEGDVRYTVPVLADNIHSLHGIGGSLRIRGG 125 D+ Y G S R G Sbjct: 116 NWTDIEYNANGWKAG---KAAFGSSDRSMIG 143 >gi|114799759|ref|YP_760236.1| hypothetical protein HNE_1524 [Hyphomonas neptunium ATCC 15444] gi|114739933|gb|ABI78058.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 196 Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 52/173 (30%), Gaps = 22/173 (12%) Query: 8 VGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYV-PIRHDFNGPYAGLSALYNG 66 + ++ A A A P A P T V ++ + ++ Y+ Sbjct: 7 LVSAAALFALIVPAAGATPSDPALAAVTPRAPAAITEADVIAAQNAWGEALVTIATTYDT 66 Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYG-------------VEGDVRYTVPVLADNIHSL 113 +EA A I A YN ED +++ EG + Y DN Sbjct: 67 QGFDEARDVAEDIIEAAYNYEDGPVLFKPTLAAPPTTFRTTAEGALAY-FVGKNDNFPGD 125 Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAI----GGT 162 G +L+ GY V +S +Y ++ + T Sbjct: 126 SGF--ALKGWRGYSVENSA-IYIDGNTAISMGNVHLTDAAGNKTTVDKTWAWT 175 >gi|218676173|ref|YP_002394992.1| outer membrane protein OmpA [Vibrio splendidus LGP32] gi|218324441|emb|CAV25864.1| outer membrane protein OmpA [Vibrio splendidus LGP32] Length = 353 Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 55/184 (29%), Gaps = 33/184 (17%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNG-----SFGEEAHHNA-GGSIFAGYNVEDSCIMYG 94 +A + Y G GE+ +A G I++GYN D G Sbjct: 12 VAASGLAAAPSIAATTYVGAKVGMGWLDSACVSGEKCDDDAIGAGIYSGYNFTDR---LG 68 Query: 95 VE--GDVRYTVPVLADNIHSLHGIGGSLRI-------RGGYEVSDSLLLYATVGPDVAQK 145 VE D L R V ++ GP Sbjct: 69 VELSSDFLGDYKTSFSKNGVTSNFSDPLIAISLTPMYRL--PVQQEFDVFFKAGPA---- 122 Query: 146 YETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSK---VEGFYNTISLGV 201 Y + + +AG+G+E LS R+EY+ + + N +++G+ Sbjct: 123 YISHGGETDVVL----SAGIGLE-KQLSSDWAVRVEYQYFDDFDDNYVQDLNSNFVTVGL 177 Query: 202 GMKF 205 F Sbjct: 178 SYNF 181 >gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976] gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976] Length = 360 Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 34/192 (17%) Query: 46 YVPIRHDFNGPYAGLSALYNGSFGEEA--HHNAGGSIFAGYNVEDSCIMYGVEGDVRYTV 103 Y + + + G+ L G+ ++ +F GY + + G+ +V Y Sbjct: 27 YAGAKAGWASFHDGIEQLDAAKGGKYGINKNSVTYGVFGGYQI-LNQDKLGLATEVGYDY 85 Query: 104 -----------PVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAG 152 G ++ ++ YEV +L +Y G + Sbjct: 86 FGRVRGTEKPNDKADKQTFRHAAHGATIALKPSYEVLPNLDVYGKAGIALVNNTYKTFNA 145 Query: 153 EITP-----IAIGGTAGVGVEVGGLSESLVARLEYR---------ASKYSKVEGFY---- 194 G GVE L E L AR+EY+ SK ++ Sbjct: 146 AQEKVKSRRFQSSLILGAGVEYAILPE-LAARIEYQWLNNAGKASYSKLNRRGATDYRPD 204 Query: 195 -NTISLGVGMKF 205 +++S G+ +F Sbjct: 205 ISSVSAGLSYRF 216 >gi|293369298|ref|ZP_06615885.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD CMC 3f] gi|292635628|gb|EFF54133.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD CMC 3f] Length = 1090 Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%) Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100 + + + G Y L A + FG S G+ + + M G +R Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651 Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 + +N + + Y + ++++ + +K + A Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIDGEGTKGLVRKKLSNDKLHWESTA-- 702 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 T +G++ G + L ++Y +KY+ ++ + L +G+ Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743 >gi|240950190|ref|ZP_04754477.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305] gi|240295277|gb|EER46063.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305] Length = 205 Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 21/115 (18%) Query: 50 RHDFNGPYAGLSA--------------LYNGSFGEEAHHNAGG---SIFAGYNVEDS-CI 91 + F G Y G + Y G+ + G + AGY + Sbjct: 21 ANTFTGGYLGGTITSVKQEFSVPYSELGYQTYEGKYIADGSRGTRVGVTAGYGFDIGSNF 80 Query: 92 MYGVEGDVRYTVPVLA---DNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 + +EG++ ++ I + + GY V + L Y + + Sbjct: 81 VGQLEGELAFSNTKTTNKLGEIITKERFATNASAILGYRVLGNFLPYVKASVNAS 135 >gi|237722056|ref|ZP_04552537.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448925|gb|EEO54716.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 1090 Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 57/163 (34%), Gaps = 19/163 (11%) Query: 49 IRHDFNGPYA---GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEG-----DVR 100 + + + G Y L A + FG S G+ + + M G +R Sbjct: 592 VNYGYKGRYLFEANLRADASSRFGVNQRWGYFPSFSGGWRISEESFMQGASDYLSNLKLR 651 Query: 101 YTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 + +N + + Y + ++++ + +K + A Sbjct: 652 VSWGKTGNNSTGNYDWQAN------YA-TGNVVIDGEGTKGLVRKKLSNDKLHWESTA-- 702 Query: 161 GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 T +G++ G + L ++Y +KY+ ++ + L +G+ Sbjct: 703 -TTDIGLDFGFFNNRLTGEIDY-YNKYTSDILYHPELYLSMGV 743 >gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 357 Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 58/196 (29%), Gaps = 40/196 (20%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86 + P + + Y G ++ G+ G G F GY Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY-- 70 Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGP- 140 + G E + Y P D + G L + Y ++ L LY +G Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGM 127 Query: 141 ---DVAQKYETGKAGEITPIAIGGT--AGVGVEVGGLSESLVARLEYRA-SKYSKVEG-- 192 + ++ G + +G E +++ R+EY+ S Sbjct: 128 VWRADSSAFDAATGDRQNNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKATVG 186 Query: 193 ---FYNTISLGVGMKF 205 +S+GV +F Sbjct: 187 ARPDNGMLSVGVSYRF 202 >gi|227499113|ref|ZP_03929248.1| predicted protein [Acidaminococcus sp. D21] gi|226904560|gb|EEH90478.1| predicted protein [Acidaminococcus sp. D21] Length = 216 Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 12/100 (12%) Query: 114 HGIGGSLRIRG---GY-EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEV 169 +G GG +R R GY + ++ + AT + + K G GVG Sbjct: 121 YGFGGYVRNRAHHRGYTDNTNGFQVGATGRLPLGKTTPWAKFGIGN-TITQYEVGVG--- 176 Query: 170 GGLSESLVARLEY---RASKY-SKVEGFYNTISLGVGMKF 205 ++++ A + Y + + + + +++GV KF Sbjct: 177 YAITDNWEANVSYNDSKYKDFSGDTDVKTHGVNVGVSYKF 216 >gi|170680671|ref|YP_001746676.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5] gi|218698021|ref|YP_002405688.1| exported surface protein precursor [Escherichia coli 55989] gi|170518389|gb|ACB16567.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5] gi|218354753|emb|CAV01825.1| exported surface protein precursor [Escherichia coli 55989] gi|324019247|gb|EGB88466.1| OmpA-like transmembrane domain protein [Escherichia coli MS 117-3] Length = 263 Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 44/230 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M ++ + VS+LA+A S QA + G A+ + + +G Sbjct: 15 MIEMNKVIAVSALAMAGMFSTQA--LADESKTGFYVTGKAGASVMSLADQRFLSG---DG 69 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIM---------------YGVEGDVRYTV 103 G+ G I AGY+ + S + Y V+ D ++ Sbjct: 70 EETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKD-SWSG 128 Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA---------- 151 D++ + + +L + Y+ + + + G A+ ++ Sbjct: 129 GYWRDDLKNEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGS 187 Query: 152 -GEITPIAIG------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 G + G + G GV ++ + L YR Y Sbjct: 188 SGRESLSRSGSADNFAWSLGAGVRYD-VTPDIALDLSYRYLDAGDSSVSY 236 >gi|331650258|ref|ZP_08351330.1| adhesin/virulence factor Hek [Escherichia coli M605] gi|331040652|gb|EGI12810.1| adhesin/virulence factor Hek [Escherichia coli M605] Length = 263 Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 44/230 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M ++ + VS+LA+A S QA + G A+ + + +G Sbjct: 15 MIEMNKVIAVSALAMAGMFSTQA--LADESKTGFYVTGKAGASVMSLADQRFLSG---DG 69 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIM---------------YGVEGDVRYTV 103 G+ G I AGY+ + S + Y V+ D ++ Sbjct: 70 EETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKD-SWSG 128 Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA---------- 151 D++ + + +L + Y+ + + + G A+ ++ Sbjct: 129 GYWRDDLKNEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGS 187 Query: 152 -GEITPIAIG------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 G + G + G GV ++ + L YR Y Sbjct: 188 SGRESLSRSGSADNFAWSLGAGVRYD-VTPDIALDLSYRYLDAGDSSVSY 236 >gi|330809271|ref|YP_004353733.1| hypothetical protein PSEBR_a2449 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377379|gb|AEA68729.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 232 Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 50/192 (26%), Gaps = 46/192 (23%) Query: 47 VPIRHDFN---GPYAGLSALYNGSFGEEAHHNAGGSIFAGYN------VEDSCIM----- 92 + F GPY N ++ N+ + YN + Sbjct: 20 IAPASSFADNLGPYVSGMGGVNWVSKQDLTQNSNDFVEMEYNQPLHSGYATGLAVGWRFP 79 Query: 93 YGVEGDVRYTVPVLADNIHSLHGIGG-------------SLRIRGGYEVSD------SLL 133 G+ +V + + + G SL Y+VS+ Sbjct: 80 VGLRPEVELSYRRNTMDQFNNRVYEGGSSIEGKGEEEASSLMANLWYDVSNLPAPFSRFT 139 Query: 134 LYATVGPDVAQKYETG-------KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA-- 184 Y G A G G G GV LS+ L+YR Sbjct: 140 PYVGGGLGYAVLTIKGLEAGGVEFGGTHRDTVSAWQLGAGVAYE-LSDHWSMSLDYRYFK 198 Query: 185 ---SKYSKVEGF 193 + Y K++G Sbjct: 199 TGEANYGKIQGL 210 >gi|309704068|emb|CBJ03414.1| heat resistant agglutinin 1 [Escherichia coli ETEC H10407] Length = 248 Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 44/228 (19%) Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + VS+LA+A SAQA AD + + ++ R DF Sbjct: 1 MKKVIAVSALAMAGMFSAQALADESKTGFYVTGKAGASVVMQTDQRFRQDF------GDD 54 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113 +Y G++ G + GY+ + + YG D RYT+ + Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDG 114 Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160 R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISD 174 Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 ISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221 >gi|330908612|gb|EGH37131.1| peptide transport periplasmic protein sapA [Escherichia coli AA86] Length = 248 Score = 35.8 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 69/228 (30%), Gaps = 44/228 (19%) Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + VS+LA+A SAQA AD + + ++ R D Sbjct: 1 MKKVIAVSALAMAGVFSAQALADENKTGFYVTGKAGASVVAQTDQRFRQDL------GED 54 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113 +Y G++ G + GY+ + + YG D YT+ + + Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGNG 114 Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160 R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYTDTSWNESGEISD 174 Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 ISELHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221 >gi|294789631|ref|ZP_06754865.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] gi|294482432|gb|EFG30125.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] Length = 185 Score = 35.8 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 22/130 (16%) Query: 89 SCIMYGVEG--DVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKY 146 + ++ VE ++ + + + S+ + GY V+ L+ YA +Y Sbjct: 64 NNLVGAVEAKANLNKSDAFDTNGVKISQKDKYSIGYQQGYRVTKDLMPYAKA------EY 117 Query: 147 ETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY-----------SKVEGFYN 195 K A G G+G + +++++ EY S+ S ++ N Sbjct: 118 INSKF--DDARANGYGVGMGAKY-AVTDNVELGAEYVHSRLKGSRLKGNGSASDLKLRGN 174 Query: 196 TISLGVGMKF 205 T+S GV +F Sbjct: 175 TVSAGVAYRF 184 >gi|254410458|ref|ZP_05024237.1| hypothetical protein MC7420_2973 [Microcoleus chthonoplastes PCC 7420] gi|196182664|gb|EDX77649.1| hypothetical protein MC7420_2973 [Microcoleus chthonoplastes PCC 7420] Length = 465 Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGP 56 + L V ++S+ ++ ++ AA + G + + N+ P + + Sbjct: 385 RTLNQTVAIASVGIS--TASLAASALTEQAEGIVKSILPVPANQPTPALNHWANF 437 >gi|255690358|ref|ZP_05414033.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] gi|260624163|gb|EEX47034.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] Length = 175 Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 5/67 (7%) Query: 140 PDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTI-S 198 D + G G G GV+ ++ + + E+R V F + + Sbjct: 113 IDGNHVHIDGDDDSDNECRFGMNIGGGVDF-AIARNWMMNFEFRY---QLVSDFDQAVFN 168 Query: 199 LGVGMKF 205 LG +F Sbjct: 169 LGFAYRF 175 >gi|331685335|ref|ZP_08385921.1| adhesin/virulence factor Hek [Escherichia coli H299] gi|323939576|gb|EGB35782.1| tia protein [Escherichia coli E482] gi|331077706|gb|EGI48918.1| adhesin/virulence factor Hek [Escherichia coli H299] Length = 248 Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 44/228 (19%) Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + VS+LA+A SAQA AD + + ++ R DF Sbjct: 1 MKKVIAVSALAMAGMFSAQALADESKTGFYVTGKAGASVVMQTDQRFRQDF------GDD 54 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113 +Y G++ G + GY+ + + YG D RYT+ + Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWRSPMGDG 114 Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160 R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYIDTSWNESGEISD 174 Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 ISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221 >gi|284008859|emb|CBA75661.1| outer membrane adhesin [Arsenophonus nasoniae] Length = 245 Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 32/158 (20%) Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDS-CIMYGVEGDVRYTVPVLADNIHSLHGIGG----- 118 +G + GG I GYN + + VE D L N + I G Sbjct: 58 SGKLDDITSGAFGGGIALGYNFKPMFQLPVRVELDFT-ARSNLKKNGSNGAEIAGQPLDI 116 Query: 119 ---------SLRIRGGYEVSDS--LLLYATVGPDVAQKYETGK-------------AGEI 154 +L + Y+ +S Y G VAQ T +G+ Sbjct: 117 EMKDKIQINTLMVNAMYDFENSSQFTPYVLAGMGVAQNNRTTDISADYQNKNAKLLSGKK 176 Query: 155 TPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEG 192 + G GV+ ++ +L L YR K + Sbjct: 177 VNYNFAWSIGAGVKYD-INSNLALDLSYRYINAGKAKT 213 >gi|196019022|ref|XP_002118912.1| hypothetical protein TRIADDRAFT_62899 [Trichoplax adhaerens] gi|190577756|gb|EDV18602.1| hypothetical protein TRIADDRAFT_62899 [Trichoplax adhaerens] Length = 193 Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 7/75 (9%) Query: 137 TVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 A K T + T G+G + L YR KV N Sbjct: 120 AGKKTGAGKIVTVGSDSKTKTNFAWNVGLGAMYN-IDPEFAVDLTYRYRDLGKVMKGDND 178 Query: 197 ------ISLGVGMKF 205 +++G+ KF Sbjct: 179 KLKSHNVTVGLVYKF 193 >gi|163743238|ref|ZP_02150619.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10] gi|161383426|gb|EDQ07814.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10] Length = 135 Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 13/114 (11%) Query: 76 AGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLY 135 + + GY+ + ++ G E +V + V +D +++R GY++ L Y Sbjct: 15 SASGLHLGYDHDFGRVVLGGEVEVDRSGRVRSDLTEDQTR---RIKLRAGYDM-GETLGY 70 Query: 136 ATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 TVG + G G+G+ L+ +L EY S Sbjct: 71 VTVGSARNETATDSD--------NGAVYGLGLSYS-LNRALRVSGEYLHQDASD 115 >gi|330894837|gb|AEC47883.1| Omp1 [Moritella viscosa] Length = 193 Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 23/183 (12%) Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSI---FAGYNVEDSCI 91 G + IA V D +G Y G A + + + G GY Sbjct: 8 GALAAIALTTSVQANQDVSGFYLGGGAGSTTVNLDDAFDEDTDGKTLKFITGYQF---NR 64 Query: 92 MYGVEGDVRYTVPVLAD-------NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 + +E + D +++ S+ GY + L + +G Sbjct: 65 IVAIEAQYTKYGEITPDKNITRDRKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLD 124 Query: 145 KYETGKAGEITPIAIGGTA---GVGVEV-GGLSESLVARLEYRASKYS-KVEGFYNTISL 199 ++ KA + TA G G+E + R+ Y A ++ +V+ I + Sbjct: 125 LGQSSKALKDDNA----TAVHLGAGLEYTPAALSGVSFRVGYEAELFAIEVDASSEDIDV 180 Query: 200 GVG 202 VG Sbjct: 181 LVG 183 >gi|225435708|ref|XP_002283489.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147854540|emb|CAN78578.1| hypothetical protein VITISV_013679 [Vitis vinifera] Length = 612 Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 12/130 (9%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIA----TNRYVPIRHDFNGP 56 M+ + V+S A + A++ V A RG T P ++GP Sbjct: 1 MRSSWADSVVNSAAENVAAGSSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYSGP 60 Query: 57 Y-AGLSALYNGSFGEEAHHNA------GGSIFAGYNVEDSCIMYGVEGDVR-YTVPVLAD 108 A + Y+G+ +++ G G+N + G E +V + V + Sbjct: 61 SSANDRSGYSGNRWGGPRNDSNQTGYSSGGRTGGWNNKSGGWDRGREREVNPFGDDVDTE 120 Query: 109 NIHSLHGIGG 118 + S G Sbjct: 121 KVFSEQENTG 130 >gi|222055021|ref|YP_002537383.1| hypothetical protein Geob_1925 [Geobacter sp. FRC-32] gi|221564310|gb|ACM20282.1| hypothetical protein Geob_1925 [Geobacter sp. FRC-32] Length = 189 Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 67/212 (31%), Gaps = 30/212 (14%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ L +L L +A AA G + +F G Y L Sbjct: 1 MKKVVLIAACFTLLLGMSSAALAAKGDTELDFGIGFATAPYD-ESDLGWGLNFGGGYEFL 59 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM-YGVEGDVRYTVPVLADNIHSLHGIGGS 119 + + + GY +G + DV ++ + S Sbjct: 60 QLSATRNDTLQIRGDI------GYESWSGDFHGFGFDEDVDFSRVPV------------S 101 Query: 120 LRIRGGYEVS--DSLLLYATVGPDVAQKYETGKAG----EITPIAIGGTAGVGVEVGGLS 173 + R Y + +L ++ +++ +G T G GVE L+ Sbjct: 102 VGCRYYYPIKQVKNLRVFGQASLELSFDSIEVGTPFGKVSDDETNVGVTPGAGVEY-MLN 160 Query: 174 ESLVARLEYRASKYSKVEGFYNTISLGVGMKF 205 ++ + + + + Y T+ G+G +F Sbjct: 161 KNFFVQAQMKE---HLISDPYFTMQGGIGFRF 189 >gi|37526372|ref|NP_929716.1| hypothetical protein plu2480 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785803|emb|CAE14854.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 175 Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 11/158 (6%) Query: 51 HDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 +G YA +NG + G ++ Y ++++ +GV + YT Sbjct: 26 STISGGYAQSHVKFNGEKIDGNPKGKGFNLKYRYELDNN---FGVISSLTYTHKGFDKFD 82 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 + + SL Y +D + Y +G + G T + G+G++ Sbjct: 83 VNYY----SLMAGPAYRFNDYVSAYGMIGAARGEFEVPVLNGSYTEGKSSVSYGLGLQFN 138 Query: 171 GLSESLVARLEYRASKYSKVEGFYNTIS---LGVGMKF 205 + + Y +K++ + +GVG +F Sbjct: 139 PV-PNWTIDTSYEYAKFNDARLGDLKVGTWVVGVGYRF 175 >gi|116623907|ref|YP_826063.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076] gi|116227069|gb|ABJ85778.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076] Length = 525 Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 16/46 (34%) Query: 15 LASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 LA + AA P R +P P+R + G YA Sbjct: 56 LAVASTPAAATPSVARATPARVQLPANPARNNQPVRIPWAGFYAAG 101 >gi|167957156|ref|ZP_02544230.1| hypothetical protein cdiviTM7_00686 [candidate division TM7 single-cell isolate TM7c] Length = 290 Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 5/103 (4%) Query: 79 SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATV 138 S+ GY + + + G + T P ++ +G G ++RGGY + + Sbjct: 25 SLSGGYGFQSNQKVVGRDA----TNPAAITDLKGSYGEGYQAQLRGGYFFTKRWGAELAL 80 Query: 139 GPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG-LSESLVARL 180 G + T K + A G G + ++++L R Sbjct: 81 GYLHGEDIATNKNQILDMTAHGRAFGASLSAVFNITDNLYIRA 123 >gi|269839216|ref|YP_003323908.1| hypothetical protein Tter_2186 [Thermobaculum terrenum ATCC BAA-798] gi|269790946|gb|ACZ43086.1| hypothetical protein Tter_2186 [Thermobaculum terrenum ATCC BAA-798] Length = 103 Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Query: 25 DPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNA 76 + V ++ +PT+ + YV PYA +S + G +G++ + Sbjct: 51 EAVDKSALPFTLTLPTVDQDSYVAAN-----PYASISGTWTGGWGDDTKKDK 97 >gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638] gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638] Length = 358 Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 57/196 (29%), Gaps = 40/196 (20%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86 + P + + Y G ++ G+ G G F GY Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY-- 70 Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVG-- 139 + G E + Y P D + G L + Y ++ L LY +G Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGM 127 Query: 140 -PDVAQKYETGKAGE---ITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEG-- 192 +GE + +G E +++ R+EY+ S Sbjct: 128 VWRADSSAFNAASGERLNNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKATVG 186 Query: 193 ---FYNTISLGVGMKF 205 +S+GV +F Sbjct: 187 ARPDNGMLSVGVSYRF 202 >gi|307610344|emb|CBW99912.1| hypothetical protein LPW_16701 [Legionella pneumophila 130b] Length = 254 Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 21/153 (13%) Query: 51 HDFNGPYAGLSA--LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLAD 108 D++G G Y F H+ G F + + I Y + + Y+ + Sbjct: 71 FDWHGSGLGGEIYLGYEKFF--RTHYYIGLEGFFNRSSNEGKI-YFFDSNELYSRILKGS 127 Query: 109 NIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE------TGKAGEITPIA---- 158 L IR G + ++Y VG V+ +G G + Sbjct: 128 ---FKQKWQSGLAIRPGIYLPSVGIIYGRVGWIVSDVNLSGSITQSGPFGSFSGRFSNTK 184 Query: 159 --IGGTAGVGVEVGGLSESLVARLEYRASKYSK 189 G G G+E+ L+++ R+E+ ++ Sbjct: 185 KKNGVQLGTGLELE-LTKNWRCRVEWDWNRLQD 216 >gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565] gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565] Length = 364 Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 44/187 (23%) Query: 57 YAGLSALYNGSFGEEAH-----------------HNAGGSIFAGYNVEDSCIMYGVEGDV 99 Y G A ++ +G + + + G +FAGY + + G E + Sbjct: 29 YVGGKAGWSNYYGVDHNQYAESIAQTLGNTSENTDDLGLGLFAGYQLNPN---LGFE--L 83 Query: 100 RYTV-------PVLADNIHSLHGIGGSLRI--RGGYEVSDSLLLYATVG--PDVAQKYET 148 Y N + ++ + + ++ L LY +G + Sbjct: 84 GYDWLGKYDTTSGTGANTLNTEAKSQMIQATMKISFPATNVLDLYGRLGGAYAWTDSEIS 143 Query: 149 GKAGEITPIAIGGT-AGV-GVEVGGLSESLVARLEYRAS--------KYSKVEGFYNTIS 198 T G G G E + ARLEY+ + S +E IS Sbjct: 144 FANTSETGKKHGAAFVGALGAEY-AIDRDWAARLEYQYTTPLGDASLDRSGIEMDNGLIS 202 Query: 199 LGVGMKF 205 G+ +F Sbjct: 203 FGMLYRF 209 >gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11] gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11] Length = 322 Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 41/141 (29%), Gaps = 22/141 (15%) Query: 57 YAGLSALYNGSFG-------EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYT---VPVL 106 Y G + G E ++ GG ++ GY + G D V Sbjct: 21 YLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSWFALEGSWHDYGSPKTFYGVG 80 Query: 107 ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETGKAGEITPIAI 159 + G+ S+ + V+D+L LYA G G + + Sbjct: 81 DGYYSNATGVDLSV--KLSLPVTDNLDLYAKGGAAYNYLSVSGNDNVHLGMFESDSSLDD 138 Query: 160 GGTAGVGVEVGGLSESLVARL 180 G L+ + RL Sbjct: 139 IWEIGA---EYALAPNWSLRL 156 >gi|189024144|ref|YP_001934912.1| outer membrane protein [Brucella abortus S19] gi|46251210|gb|AAS84576.1| truncated Omp25b [Brucella abortus] gi|46251225|gb|AAS84583.1| truncated Omp25b [Brucella abortus] gi|46251227|gb|AAS84584.1| truncated Omp25b [Brucella abortus] gi|189019716|gb|ACD72438.1| outer membrane protein, putative [Brucella abortus S19] Length = 68 Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 9/36 (25%) Query: 42 ATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAG 77 V +NG Y G Y + + Sbjct: 31 PAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTS 66 >gi|19911156|dbj|BAB86906.1| outer membrane protein 18/16 [Actinobacillus actinomycetemcomitans] Length = 188 Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 16/179 (8%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV-EGD 98 + + DF G G+ ++A + + A Y ++ G+ EG Sbjct: 13 AVLVSTSAVASSDFTGFGIGVGVGTTKY--KDAKRISNVDLIADYGIDYGNDFVGIIEGK 70 Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGG------YEVSDSLLLYATVGPDVAQKYET---- 148 ++ L DN S + + + R G Y V+ S+L YA VG A+ Sbjct: 71 LKLNKSTLHDNNASGYRGKLNEKARLGVSYLQGYRVTPSILPYAKVGVQTAKFESEVRTR 130 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY--RASKYSKVEGFYNTISLGVGMKF 205 + + G G GV+V + + ++ LEY +K+ + N S +F Sbjct: 131 NYSATHSDTKNGIGFGAGVKVNLVPDFELS-LEYLRTHNKFDGQKLRGNVYSTNATYRF 188 >gi|261866907|ref|YP_003254829.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293391272|ref|ZP_06635606.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261412239|gb|ACX81610.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290951806|gb|EFE01925.1| outer membrane protein 18/16 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 187 Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 16/179 (8%) Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGV-EGD 98 + + DF G G+ ++A + + A Y ++ G+ EG Sbjct: 12 AVLVSTSAVASSDFTGFGIGVGVGTTKY--KDAKRISNVDLIADYGIDYGNDFVGIIEGK 69 Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGG------YEVSDSLLLYATVGPDVAQKYET---- 148 ++ L DN S + + + R G Y V+ S+L YA VG A+ Sbjct: 70 LKLNKSTLHDNNASGYRGKLNEKARLGVSYLQGYRVTPSILPYAKVGVQTAKFESEVRTR 129 Query: 149 GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEY--RASKYSKVEGFYNTISLGVGMKF 205 + + G G GV+V + + ++ LEY +K+ + N S +F Sbjct: 130 NYSATHSDTKNGIGFGAGVKVNLVPDFELS-LEYLRTHNKFDGQKLRGNVYSTNATYRF 187 >gi|329120556|ref|ZP_08249219.1| surface protein A [Neisseria bacilliformis ATCC BAA-1200] gi|327460780|gb|EGF07114.1| surface protein A [Neisseria bacilliformis ATCC BAA-1200] Length = 231 Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 47/176 (26%), Gaps = 32/176 (18%) Query: 55 GPYAGLSAL-----YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADN 109 G Y Y + AGY+ D + V D YT D Sbjct: 63 GFYVQGDLGHATVKYKEDGDSWKTKGFSPRLSAGYDFGD----FRVAAD--YTHYKKYDE 116 Query: 110 IHSLH----GIGGSLR-----IRGGYEVSDSLLLYATVGPDVAQKYETGKA--------G 152 + R ++ + Y + + Sbjct: 117 TLTDQFGTDHFEAKARSIGVSGIYDFDTGTPVKPYVGARIGINRISLEATETAPGFYEKE 176 Query: 153 EITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGF---YNTISLGVGMKF 205 + +G A GV +S+++ YR + + K +G N GV +KF Sbjct: 177 SYSKTKLGLGAMAGVSYD-ISDNIALDAGYRYNHWGKFDGVKVHSNEFHGGVRVKF 231 >gi|196229516|ref|ZP_03128381.1| hypothetical protein CfE428DRAFT_1546 [Chthoniobacter flavus Ellin428] gi|196226748|gb|EDY21253.1| hypothetical protein CfE428DRAFT_1546 [Chthoniobacter flavus Ellin428] Length = 178 Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 64/206 (31%), Gaps = 31/206 (15%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M+K+ + LA SA A ++ + VPT + ++ D G +A Sbjct: 1 MKKIAIPFVA---CLALASSAFAGHEMKEM----KQPVPTEPCFKDQELQLDVFGSWA-- 51 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + GG + Y GV D + L GSL Sbjct: 52 -DTHRHDNVAGPKDGFGGGLGVNYFFMR---YLGVGADANIV-----SASNGLWTFSGSL 102 Query: 121 RIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG-GTAGVGVEVGGLSESLVAR 179 R Y + +A TG + I G G G+E + L Sbjct: 103 IAR--YPIE-------AGNLCLAPYILTGGGFQTDGINAGTWHVGGGLEWRA-THHLGIY 152 Query: 180 LEYRASKYSKVEGFYNTISLGVGMKF 205 E R + +++ + +G++F Sbjct: 153 GEGRYTWAGA--HEEDSVRVSLGVRF 176 >gi|94496074|ref|ZP_01302653.1| hypothetical protein SKA58_15867 [Sphingomonas sp. SKA58] gi|94424766|gb|EAT09788.1| hypothetical protein SKA58_15867 [Sphingomonas sp. SKA58] Length = 209 Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 38/123 (30%), Gaps = 21/123 (17%) Query: 56 PYAGLSALYNGSFGEEAHHNAGGSIFAG----------YNVEDSCIMYGVEGDVRYTVPV 105 PY G+ + E + G YNV ++ GVEG Sbjct: 58 PYVGVMGGVHNFDSETGKEGIPPVGYKGRMVEGVAGVNYNV-AGPLVVGVEG-------T 109 Query: 106 LADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGV 165 + + + R G + L++ VG + G +P G T G Sbjct: 110 ASKGVSGDIDWEYGVAGRAGVKAGKDSLIFGKVGY---KWVNFDALGPDSPDFHGTTYGA 166 Query: 166 GVE 168 GVE Sbjct: 167 GVE 169 >gi|187478192|ref|YP_786216.1| flagellar hook-associated protein 3 [Bordetella avium 197N] gi|115422778|emb|CAJ49306.1| flagellar hook-associated protein 3 [Bordetella avium 197N] Length = 410 Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 9/121 (7%) Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHG--IGGSLRIRGGYEV 128 + G +F+GY + G+V Y + + + GS G ++ Sbjct: 126 NSTDGNGQYLFSGYQGNTQPFVIDASGNVSYNGDKGQRMVQADQSRQLAGS---DIGTDI 182 Query: 129 SDSLLL----YATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 + Y + + G G + + + +LEY Sbjct: 183 FGRAVPGTLSYIASAGAANKGTGQFSTVSLKSPGAGNFVGADFSISFANNATTGKLEYTV 242 Query: 185 S 185 + Sbjct: 243 T 243 >gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32] Length = 455 Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 37/142 (26%), Gaps = 7/142 (4%) Query: 62 ALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR 121 Y + G I AGYN G E YT + Sbjct: 39 GGYTFDGKQHLETQPVGGIRAGYNFTKH---LGAEALFDYTRTEGTRSSTKTDFYRYGAD 95 Query: 122 IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 + L+ Y G + G G++ +S++ R + Sbjct: 96 ALLHIFPDNRLVPYIAAGYSGMSLDSNDGTKLTRGVFD---YGPGIKY-FISDTWALRGD 151 Query: 182 YRASKYSKVEGFYNTISLGVGM 203 +R + Y+ +G+ Sbjct: 152 FRHLIFKHEGDSYSNYEYNLGL 173 >gi|330447800|ref|ZP_08311448.1| putative uncharacterized protein PP1185 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491991|dbj|GAA05945.1| putative uncharacterized protein PP1185 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 188 Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 20/144 (13%) Query: 57 YAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIM---------YGVEGDVRYTVPVLA 107 + G Y + +H S A Y + I+ YG + D A Sbjct: 27 FMGGGVGYQLDNFKGSHKMH--SEDASYQIRGGIIVDDTHRLMATYGYKKDKFNFYDADA 84 Query: 108 DNIHSLHGIGGSLRIRGGYEVSDSL-----LLYATVGPDVAQKYETGKAGEITPIAIGGT 162 D + + H L Y+ + L K + G+ + Sbjct: 85 DGVKAKHKQDLYL---ASYDYLVPVGANVNLFAGASMGAAHNKVTHQEGGKKSSTDFVWG 141 Query: 163 AGVGVEVGGLSESLVARLEYRASK 186 +G + L++++ L YR Sbjct: 142 GQLGA-MVQLTDNISTDLTYRYLD 164 >gi|299147800|ref|ZP_07040863.1| putative outer membrane protein, probably involved in nutrient binding [Bacteroides sp. 3_1_23] gi|298513983|gb|EFI37869.1| putative outer membrane protein, probably involved in nutrient binding [Bacteroides sp. 3_1_23] Length = 1019 Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%) Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149 + V +N +L++R Y + + + Y T+G + YE G Sbjct: 597 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 656 Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 E++ + TA +GV+ + L +EY + ++K +++ +G Sbjct: 657 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 715 >gi|284922912|emb|CBG36001.1| heat resistant agglutinin 1 [Escherichia coli 042] Length = 263 Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 44/230 (19%) Query: 1 MQKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL 60 M ++ + VS+LA+A S QA + G A+ + + +G Sbjct: 15 MIEMNKVIAVSALAMAGMFSTQA--LADESKTGFYVTGKAGASVMSLADQRFLSG---DG 69 Query: 61 SALYNGSFGEEAHHNAGGSIFAGYNV--EDSCIM---------------YGVEGDVRYTV 103 G+ G I AGY+ + S + Y V+ D ++ Sbjct: 70 EETSKYKGGDGHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADSKYNVDKD-SWSG 128 Query: 104 PVLADNIHSLHGIGGSLRIRGGYEVSDS--LLLYATVGPDVAQKYETGKA---------- 151 D++ + + +L + Y+ + + + G A+ ++ Sbjct: 129 GYWRDDLKNEVSVN-TLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGS 187 Query: 152 -GEITPIAIG------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 G + G + G GV ++ + L YR Y Sbjct: 188 SGRESLSRSGSADNFAWSFGAGVRYD-VTPDIALDLSYRYLDAGDSSVSY 236 >gi|149190315|ref|ZP_01868588.1| hypothetical protein VSAK1_13917 [Vibrio shilonii AK1] gi|148835804|gb|EDL52768.1| hypothetical protein VSAK1_13917 [Vibrio shilonii AK1] Length = 165 Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 24/157 (15%) Query: 56 PYAGLSALYNGSFGEEAHHNAGG----SIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH 111 Y G + E + + AGY+ + +EG Y + + Sbjct: 26 FYLGTIYSTVRAADESVDKSTSNISNLGLQAGYSFNQH---FALEGRYFYALNRSSSLPQ 82 Query: 112 SLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 I + Y ++D+ +YA G + A++Y + + G G GV Sbjct: 83 HQSQIY----AKASYPLNDTFSIYALAGVNFAKEY--SASSQTKGYFSG---GAGVSYT- 132 Query: 172 LSESLVARLEY---RASKYSKVEGFYNTISLGVGMKF 205 ++ L LEY SK+ K N +++G+ F Sbjct: 133 FTDKLKGSLEYVSLAHSKFYK----GNAVNIGLSYCF 165 >gi|94266061|ref|ZP_01289780.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] gi|93453383|gb|EAT03811.1| Twin-arginine translocation pathway signal [delta proteobacterium MLMS-1] Length = 234 Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 62/203 (30%), Gaps = 34/203 (16%) Query: 1 MQKLFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVP-----TIATNRYVPIRHDF- 53 M+K+ + +L A A A+ +P T + ++DF Sbjct: 14 MKKIMIGAAACALTALFAGPAMAEANDGYYVSGNIGVAMPRDSTATYPDTPGLSQKYDFD 73 Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIH-S 112 +G GL+ Y A + S I D+ + + ++ + Sbjct: 74 SGLALGLALGYKLGPARVEGEIA---------YQKSDI-----DDITVSQAGTSTSLSAA 119 Query: 113 LHGIGGSLRI-----RGGYEVSDS--LLLYATVGPDVAQKYETGKAG----EITPIAIGG 161 G + G Y+ ++ Y T G +A+ + + Sbjct: 120 GVQFSGDAKATSFLLNGYYDFHNNSAFTPYLTAGLGLAKVKVSQTVVGQPWSDSDTVFAY 179 Query: 162 TAGVGVEVGGLSESLVARLEYRA 184 GVG E L++++ YR Sbjct: 180 QVGVGTEY-ALNQTVSLDARYRY 201 >gi|260174234|ref|ZP_05760646.1| TonB-dependent receptor [Bacteroides sp. D2] gi|315922503|ref|ZP_07918743.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696378|gb|EFS33213.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 1019 Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%) Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149 + V +N +L++R Y + + + Y T+G + YE G Sbjct: 597 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 656 Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 E++ + TA +GV+ + L +EY + ++K +++ +G Sbjct: 657 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 715 >gi|239620737|ref|ZP_04663768.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516313|gb|EEQ56180.1| predicted protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 576 Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 6/117 (5%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S L S Q PV + P + G Y + A Sbjct: 19 VTMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAG 76 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + + ++Y D R A+ I + G SL Sbjct: 77 VQSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129 >gi|310800507|gb|EFQ35400.1| GMC oxidoreductase [Glomerella graminicola M1.001] Length = 645 Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 32/175 (18%) Query: 24 ADPVRRAHHGGRGVVPTI--ATNRYVPIRH-----------DF----NGPYAGLSALYNG 66 AD V + G P + N P + D+ +GP + Y Sbjct: 157 ADAVGDQSYNWEGFSPHLIKPVNFTAPSSYRFPNSTARHPPDWTSHTSGPLQLGFSNYAW 216 Query: 67 SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGY 126 + G G+ + G V Y + L + S R G Sbjct: 217 PWASWVKKALIG---LGFEENPDGFVGGSLQGVGYQLSTLDATSFTKETSDSSYLERLGM 273 Query: 127 EVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLE 181 + +++L++Y T + + A GV V+ GGL L R E Sbjct: 274 D-NENLVVY-------TNSLVTRILLDDSKTAN----GVEVDYGGLMLKLACRKE 316 >gi|293368764|ref|ZP_06615368.1| TonB-dependent receptor [Bacteroides ovatus SD CMC 3f] gi|292636069|gb|EFF54557.1| TonB-dependent receptor [Bacteroides ovatus SD CMC 3f] Length = 1019 Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%) Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149 + V +N +L++R Y + + + Y T+G + YE G Sbjct: 597 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 656 Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 E++ + TA +GV+ + L +EY + ++K +++ +G Sbjct: 657 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 715 >gi|237718249|ref|ZP_04548730.1| TonB-dependent receptor [Bacteroides sp. 2_2_4] gi|229452433|gb|EEO58224.1| TonB-dependent receptor [Bacteroides sp. 2_2_4] Length = 1008 Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 16/120 (13%) Query: 99 VRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG------ 149 + V +N +L++R Y + + + Y T+G + YE G Sbjct: 586 AAFAWRVNQENFLKDVSWIDNLKLRVSYGIVGNQNGIGNYTTLGLADNKGYEFGDTFQMG 645 Query: 150 --KAGEITPIAIGG----TAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGVGM 203 E++ + TA +GV+ + L +EY + ++K +++ +G Sbjct: 646 YLPGKELSNPNLKWEQSATANLGVDFSFFNGRLNGTVEY-YNTHTKDLLVERSLNASLGY 704 >gi|293393264|ref|ZP_06637579.1| porin [Serratia odorifera DSM 4582] gi|291424410|gb|EFE97624.1| porin [Serratia odorifera DSM 4582] Length = 227 Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 8/86 (9%) Query: 126 YEVSDSLLLYATVGPDVAQKYE-------TGKAGEITPIAIGGTAGVGVEVGGLSESLVA 178 Y + ++AT G +++ + + + G GV + E L Sbjct: 122 YALGYGFSVFATAGVGISKIKAGGWQGVPSREYDSTSQNNFTYAIGGGVSYAPI-ERLNV 180 Query: 179 RLEYRASKYSKVEGFYNTISLGVGMK 204 L YR K+E YN + G+K Sbjct: 181 DLGYRYVDMGKIESGYNRFANARGLK 206 >gi|165920940|ref|ZP_02219610.1| conserved hypothetical protein [Coxiella burnetii RSA 334] gi|165916788|gb|EDR35392.1| conserved hypothetical protein [Coxiella burnetii RSA 334] Length = 250 Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 20/132 (15%) Query: 83 GYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLL--------- 133 GY + GV+ +Y V + +I +G + R R G ++ LL Sbjct: 85 GYTFASDWWIAGVKAQYQY-DNVRSVHIMDASLVGSTYRTRLGSHLTAMLLAGIKVNEAN 143 Query: 134 -LYATVG----PDVAQKYETGK-AGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKY 187 +Y G ++ G A + GG AG+G + ++ L Y + Y Sbjct: 144 AVYLEAGYSTVWGKTTLFDPGPVAVSMKNRLNGGIAGIGWRHYFM-NNVFLDLSYDYALY 202 Query: 188 SKVEGFYNTISL 199 N+++L Sbjct: 203 RSKS---NSVTL 211 >gi|330894843|gb|AEC47886.1| Omp1 [Moritella viscosa] Length = 193 Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 44/148 (29%), Gaps = 21/148 (14%) Query: 36 GVVPTIATNRYVPIRHDFNGPYAGLSAL-YNGSFGEEAHHNAGGSI---FAGYNVEDSCI 91 G + IA V D +G Y G A + + + G GY Sbjct: 8 GALAAIALTTSVQANQDVSGFYLGGGAGSTTVNLDDAFDEDTDGKTLKFITGYQF---NR 64 Query: 92 MYGVEGDVRYTVPVL-------ADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ 144 + +E + +++ S+ GY + L + +G Sbjct: 65 IVAIEAQYTKYGEITPDKNITRDGKLYTWDATTFSVSANLGYTFQNGLRPFGIIGLSSLD 124 Query: 145 KYETGKAGEITPIAIGGTA---GVGVEV 169 ++ KA + TA G G+E Sbjct: 125 LGQSSKALKDDNA----TAVHLGAGLEY 148 >gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp. palearctica Y11] gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 357 Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 58/196 (29%), Gaps = 40/196 (20%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYN--------------GSFGEEAHHNAGGSIFAGYNV 86 + P + + Y G ++ G+ G G F GY Sbjct: 16 ATVAQAAPKDNTW---YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY-- 70 Query: 87 EDSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPD 141 + G E + Y P D + G L + Y ++ L LY +G Sbjct: 71 -QANQYLGFE--MGYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGM 127 Query: 142 VAQKYETGKAGEITPIAIGGTAGV------GVEVGGLSESLVARLEYRA-SKYSKVEG-- 192 V + + A GV G E +++ R+EY+ S Sbjct: 128 VWRADSSAFDATTGARANNHDTGVSPLVALGAEY-AWTKNWATRMEYQWVSNIGDKATVG 186 Query: 193 ---FYNTISLGVGMKF 205 +S+GV +F Sbjct: 187 ARPDNGMLSVGVSYRF 202 >gi|254673682|emb|CBA09282.1| Opacity protein and related surface antigens [Neisseria meningitidis alpha275] Length = 174 Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 6/85 (7%) Query: 126 YEVSDSLLLYATVGPDVAQKYET-GKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRA 184 ++ + Y + + G + + +IG GV ++ ++ YR Sbjct: 91 FDTQSPVKPYLGARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSY-AVTPNVDLDASYRY 149 Query: 185 SKYSKVEGFYNT----ISLGVGMKF 205 + KV N +S+GV +KF Sbjct: 150 NYIGKVNTVKNVRSGELSVGVRVKF 174 >gi|153951167|ref|YP_001397651.1| major outer membrane protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938613|gb|ABS43354.1| major outer membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 440 Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 56/165 (33%), Gaps = 19/165 (11%) Query: 52 DF--NGPYAGLSAL----YNGSFGEEAHHNAGGSIFA-GYNVEDSCIMYGVEGDVRYTVP 104 ++ G Y G S G G GSI A G++ + YG + V TV Sbjct: 261 NWTIEGAYLGNSVDNRLEKEGKIGNGNFFALRGSIEANGWDASLGGLYYGEKDKVTTTVI 320 Query: 105 VLADNIHS---LHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGG 161 N+ S I + R + ++ Y T G + G GG Sbjct: 321 EDQGNLDSLLAGQEIFNTTGSRLNGDTGRNIFGYVTGGYAFNETVRVGA-----EFIYGG 375 Query: 162 TAGVGVEVGGLSES----LVARLEYRASKYSKVEGFYNTISLGVG 202 T G S S VAR+ Y+ S FY+ ++L G Sbjct: 376 TKSGSATYLGTSGSKKLEAVARVNYKYSPKLNFSAFYSYLNLDQG 420 >gi|23010810|ref|ZP_00051374.1| COG1024: Enoyl-CoA hydratase/carnithine racemase [Magnetospirillum magnetotacticum MS-1] Length = 109 Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 7/75 (9%) Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGE-----ITPIAIGGTAGVGVEVGGLSE 174 +R R GY D L+Y T G + A IG G GVE L++ Sbjct: 1 MRGRLGYAF-DRWLVYGTGGFAYGGGSRSPYAASYPYTLPDTARIGYALGGGVEY-ALTD 58 Query: 175 SLVARLEYRASKYSK 189 + ++E + Sbjct: 59 HISVKVEGLYVDLGR 73 >gi|332991681|gb|AEF01736.1| putative outer membrane protein A [Alteromonas sp. SN2] Length = 192 Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 9/132 (6%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGG--SIFAGYNVEDSCIMYGVEGDVR-YTVPVLADNI 110 +G Y G + Y GE+ + GY + + G D Y + + Sbjct: 31 SGFYVGGNYGYLRVEGEDDFDDDKDVWQGLVGYKFNEWVAVEGSFIDFGDYGNDIAGGDT 90 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 G +++ ++D LYA G ++ G G+ Sbjct: 91 D---GYTAAIKGTL--PITDRFSLYAKAGQLWSETEYNLGGVSSDYDDESLFVGAGLSY- 144 Query: 171 GLSESLVARLEY 182 ++++ + EY Sbjct: 145 AITKNFLVNAEY 156 >gi|323969105|gb|EGB64410.1| tia protein [Escherichia coli TA007] Length = 248 Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 44/228 (19%) Query: 4 LFLAVGVSSLALASFCSAQA-ADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + + VS+LA+A SAQA AD + + +I T R DF Sbjct: 1 MKKVIAVSALAMAGVFSAQALADRGKTGFYVTGKAGASIVTQTDQRFRQDF------GDD 54 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNV-EDSCI-------MYG-VEGDVRYTVPVLADNIHSL 113 +Y G++ G + GY+ + + YG D RYT+ + Sbjct: 55 VYKYKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSRYTLDTWHSPMGDG 114 Query: 114 HGIGGSLRIRGG-------YEVSDS--LLLYATVGPDVAQKYETGKAGEITPIAIG---- 160 R+ Y+ +S + +VG A+ + + + G Sbjct: 115 GREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARVHHKATYTDTSWNESGDISD 174 Query: 161 --------------GTAGVGVEVGGLSESLVARLEYRASKYSKVEGFY 194 + G GV ++ + L YR K Y Sbjct: 175 ISALHYSGYDNNFAWSIGAGVRYD-VTPDIALDLSYRYLDAGKSSLSY 221 >gi|322691606|ref|YP_004221176.1| hypothetical protein BLLJ_1417 [Bifidobacterium longum subsp. longum JCM 1217] gi|320456462|dbj|BAJ67084.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 573 Score = 34.6 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 6/117 (5%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S L S Q PV + P + G Y + A Sbjct: 16 VTMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAG 73 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + S ++Y D R A+ + + G SL Sbjct: 74 VQSDGYRVAREFLTGSASAGWNGDSSALVYSGTPDFR----RRANTMSTPQGAESSL 126 >gi|164657929|ref|XP_001730090.1| hypothetical protein MGL_2472 [Malassezia globosa CBS 7966] gi|159103985|gb|EDP42876.1| hypothetical protein MGL_2472 [Malassezia globosa CBS 7966] Length = 1329 Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 8/154 (5%) Query: 11 SSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFN-GPYAGLSALYNGSFG 69 S L + +AD ++ P + P R ++ G YAG Sbjct: 810 SVLGDTPTGGSYSADAYGESYVPQELSEPVTSEYAEEPYRGNYAEGDYAGGEYAEGDDQA 869 Query: 70 EEAHHNAGGSIFAGYNVE----DSCIMYGVEGDVRYTVPVLAD---NIHSLHGIGGSLRI 122 + A + G +A + + + G + Y + ++ G Sbjct: 870 DYAEGDYAGGEYAEGDYQADYAEGNYAGGEYAEGDYAGDYAKEDYQGEYAEGDYTGGEYA 929 Query: 123 RGGYEVSDSLLLYATVGPDVAQKYETGKAGEITP 156 G Y+ + YA G GE T Sbjct: 930 EGNYQGDYAEGDYAEGGYQGDYAEGDYAGGEYTE 963 >gi|91224159|ref|ZP_01259422.1| putative outer membrane protein [Vibrio alginolyticus 12G01] gi|254228031|ref|ZP_04921461.1| outer membrane protein [Vibrio sp. Ex25] gi|262395989|ref|YP_003287842.1| putative outer membrane protein [Vibrio sp. Ex25] gi|91191070|gb|EAS77336.1| putative outer membrane protein [Vibrio alginolyticus 12G01] gi|151939527|gb|EDN58355.1| outer membrane protein [Vibrio sp. Ex25] gi|262339583|gb|ACY53377.1| putative outer membrane protein [Vibrio sp. Ex25] Length = 204 Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 24/189 (12%) Query: 37 VVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE 96 P + + D NG G + E + G +F GY +E Sbjct: 20 AAPYVGASVGQASFGDVNGSINGGGTNASTKLKLEDDSSLSGKVFGGYKF---NEYISLE 76 Query: 97 GDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPD-------VAQKYETG 149 + + + S++ + + D L+A G ++ G Sbjct: 77 AAIGGYDALDGKVVTVGDMKYLSIQPKATLPIGDRFNLFAKAGLSYFNAEFKISNSVIDG 136 Query: 150 KAG--EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-------SKYSK----VEGFYNT 196 AG I+ + G G+G E ++E+ ++E+ +K+ V+ N Sbjct: 137 SAGHTTISDSTVTGMYGLGAEF-AITENFALQVEWEYMMPELDIAKFGNEKVTVDADINV 195 Query: 197 ISLGVGMKF 205 S+G+ +F Sbjct: 196 FSVGMSYRF 204 >gi|89056585|ref|YP_512036.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1] gi|88866134|gb|ABD57011.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1] Length = 245 Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 42/172 (24%) Query: 49 IRHDFNGPYAGLSALY--------------NGSFGEEAHHNAGGSIFAGYNVEDSCIMYG 94 + F G Y G+ A NG+ + H ++FAGY + + G Sbjct: 20 AQDTFTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHATGATNLFAGYTTDLGIWVVG 79 Query: 95 VEGDVRYTVPVLADN-----------IHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 E ++ ++ I +R G +++ LL+AT G + Sbjct: 80 GEAELSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIAGQALTEDTLLFATAGLTAS 139 Query: 144 Q----------------KYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 Q + E T +A G GVG E ++E R Sbjct: 140 QYTYRGVRAVTNLGMGLGGASNTGPEETGMAYGFNIGVGAE-HRVTERFSFR 190 >gi|152969400|ref|YP_001334509.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893868|ref|YP_002918602.1| outer membrane protein X [Klebsiella pneumoniae NTUH-K2044] gi|262041098|ref|ZP_06014316.1| outer membrane protein X [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010085|ref|ZP_08306684.1| outer membrane protein X [Klebsiella sp. MS 92-3] gi|1279830|gb|AAA97932.1| OmpK17 [Klebsiella pneumoniae] gi|150954249|gb|ABR76279.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546184|dbj|BAH62535.1| outer membrane protein X [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041548|gb|EEW42601.1| outer membrane protein X [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534636|gb|EGF61210.1| outer membrane protein X [Klebsiella sp. MS 92-3] Length = 170 Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 3/135 (2%) Query: 71 EAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSD 130 + N G Y E GV G YT N G + Y ++D Sbjct: 39 QGKANKAGGFNLKYRYEQDNNPLGVIGSFTYTEKDNNSNGTYNKGQYYGITAGPAYRLND 98 Query: 131 SLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKV 190 +Y VG + + G + G G++ + E++ Y S+ V Sbjct: 99 WASIYGVVGVGYGKFQNNNYPHKSDMSDYGFSYGAGLQFNPI-ENVALDFSYEQSRIRNV 157 Query: 191 EGFYNTISLGVGMKF 205 + T GVG +F Sbjct: 158 DVG--TWIAGVGYRF 170 >gi|268590120|ref|ZP_06124341.1| outer membrane protein P5 [Providencia rettgeri DSM 1131] gi|291314389|gb|EFE54842.1| outer membrane protein P5 [Providencia rettgeri DSM 1131] Length = 363 Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 44/193 (22%) Query: 48 PIRHDFNGPYAGLSALYN-------------------GSFGEEAHHNA-GGSIFAGYNVE 87 P + + Y G ++ G+ G + G +AGY Sbjct: 23 PKDNTW---YTGAKLGWSHYEDTSLNPAKTGTDYAGWGTVGNSTDRDTIGAGAYAGYQYN 79 Query: 88 DSCIMYGVEGDVRYTV----PVLADNIHSLHGIGG-SLRIRGGYEVSDSLLLYATVGPDV 142 G E + Y G SL + Y + D L +Y +G V Sbjct: 80 Q---YLGFE--LGYDWFGKMKYKGAGNSGDLKSMGVSLTTKLSYPIMDDLDVYTRLGGMV 134 Query: 143 AQKYETGKAG----EITPIAIGGTAGVGVEVGGLSESLVARLEYRA-SKYSKVEGFYNT- 196 + + T + +G+E ++ RL+Y+ S + Sbjct: 135 YRTEAKAHQNGQRFKETDTGVAPVYALGLEY-AITPEWATRLDYQWVSNLGDKDNIGTRP 193 Query: 197 ----ISLGVGMKF 205 +S+GV +F Sbjct: 194 DNGMLSVGVAYRF 206 >gi|312132348|ref|YP_003999687.1| protein [Bifidobacterium longum subsp. longum BBMN68] gi|311773981|gb|ADQ03469.1| Hypothetical protein BBMN68_73 [Bifidobacterium longum subsp. longum BBMN68] Length = 576 Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + S L S Q PV + P + G Y + A Sbjct: 20 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 77 Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + + ++Y D R A+ I + G SL Sbjct: 78 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129 >gi|227546761|ref|ZP_03976810.1| lipoprotein lpqB precursor [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212723|gb|EEI80604.1| lipoprotein lpqB precursor [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 576 Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 6/117 (5%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S L S Q PV + P + P G Y + A Sbjct: 19 VTMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPADDAQPEIIV-KGFYDAMPAG 76 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + S ++Y D R A+ + + G SL Sbjct: 77 VQSDGYRVAREFLTGSASAGWNGDSSALVYSGTPDFR----RRANTMSTPQGAESSL 129 >gi|194333987|ref|YP_002015847.1| outer surface protein, putative [Prosthecochloris aestuarii DSM 271] gi|194311805|gb|ACF46200.1| outer surface protein, putative [Prosthecochloris aestuarii DSM 271] Length = 201 Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 72/232 (31%), Gaps = 61/232 (26%) Query: 2 QKLFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLS 61 +KL + S A+ F SA A PYAGL+ Sbjct: 3 RKLLSGLTCSCCAIVFFQSAYAGS------------------------------PYAGLT 32 Query: 62 AL--YNGSF---GEEAHHNAGGSIFAGYNVEDSCIM--YGVEGDVRYTVPVLADNIHSLH 114 Y + G ++ GY + + +EG++ Y + Sbjct: 33 VGKAYLNNSSIKGSNREYSCDDG--EGYCYAHGLELGNFRLEGEIGYQKNDFDAIEPGVR 90 Query: 115 GIGG-----SLRIRGGYEVS---DSLLLYATVGPDVAQKY--ETGKAGEITPIAIGGTAG 164 G SL G Y +S ++ + G VA + A + + + + G Sbjct: 91 TANGDLSILSLLGNGYYSLSAQGSRVMPVISAGVGVANIEFEDEVNAVDDSDLVLAYQVG 150 Query: 165 VGVEVGGLSESLVARLEYRASKYSK-----------VEGFYNTISLGVGMKF 205 G+ LSES+ YR S V+ + I +GV + F Sbjct: 151 AGLGY-KLSESVTVTTMYRYFSTSDAGFDEEADDLHVDISSHNIMMGVKVNF 201 >gi|317481678|ref|ZP_07940712.1| sporulation and spore germination [Bifidobacterium sp. 12_1_47BFAA] gi|316916910|gb|EFV38298.1| sporulation and spore germination [Bifidobacterium sp. 12_1_47BFAA] Length = 573 Score = 34.6 bits (78), Expect = 8.4, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + S L S Q PV + P + G Y + A Sbjct: 17 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 74 Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + + ++Y D R A+ I + G SL Sbjct: 75 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 126 >gi|296454573|ref|YP_003661716.1| hypothetical protein BLJ_1442 [Bifidobacterium longum subsp. longum JDM301] gi|296184004|gb|ADH00886.1| hypothetical protein BLJ_1442 [Bifidobacterium longum subsp. longum JDM301] Length = 576 Score = 34.6 bits (78), Expect = 8.5, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + S L S Q PV + P + G Y + A Sbjct: 20 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 77 Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + + ++Y D R A+ I + G SL Sbjct: 78 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129 >gi|189438907|ref|YP_001953988.1| hypothetical protein BLD_0044 [Bifidobacterium longum DJO10A] gi|226738497|sp|B3DPP6|LPQB_BIFLD RecName: Full=Lipoprotein lpqB; Flags: Precursor gi|189427342|gb|ACD97490.1| Hypothetical protein BLD_0044 [Bifidobacterium longum DJO10A] Length = 576 Score = 34.6 bits (78), Expect = 8.5, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + S L S Q PV + P + G Y + A Sbjct: 20 TMTACSSPFGLPISGSVQTLAPVEQQAQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 77 Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + + ++Y D R A+ I + G SL Sbjct: 78 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129 >gi|209964069|ref|YP_002296984.1| heat resistant agglutinin 1, putative [Rhodospirillum centenum SW] gi|209957535|gb|ACI98171.1| heat resistant agglutinin 1, putative [Rhodospirillum centenum SW] Length = 217 Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 33/172 (19%) Query: 54 NGPYAGLSALYNGSFGEEAHHNAGGSIFAGY------------NVEDSCIMYGVEGDVRY 101 +GPY S Y+ S +E ++ I AGY + D I+ G G Sbjct: 30 SGPYIRGSLGYSWSSEDEIDYSPLWGIGAGYRINPNLRVDLTADWRDRYIVEGGRGFAAG 89 Query: 102 TVPVLADNIHSLHGIGGSLRIRGGYEVSDS---LLLYATVGPDVAQKYETG--------- 149 +P+ ++ + + G +++ + + Y G ++ Sbjct: 90 GLPINSEVDNRTLMVNAYYDF-GAFDLMGNRQQVRPYLGAGIGLSTTKVDDVDVIIADQN 148 Query: 150 -----KAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNT 196 + + AG VE G L L YR KV+ T Sbjct: 149 RLERFFGSDDDQFSWQLMAGAQVETG---NGLFFDLGYRYVDLGKVQLTSTT 197 >gi|168243829|ref|ZP_02668761.1| attachment/invasion protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450849|ref|YP_002045047.1| attachment/invasion protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194409153|gb|ACF69372.1| attachment/invasion protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205337212|gb|EDZ23976.1| attachment/invasion protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 174 Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 8/126 (6%) Query: 84 YNVEDSCIMYGVEGDVRY-TVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDV 142 YN ED +G G V Y + V SL + Y +D L Y +G Sbjct: 53 YNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAAN 112 Query: 143 AQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYRASKYS---KVEGFYNTISL 199 + A G G+++ + E++ Y + +S + T L Sbjct: 113 GHIKDNWG-NSDNKTAFAY--GAGIQLNPV-ENIAVNASYEHTSFSTDADSDVKAGTWVL 168 Query: 200 GVGMKF 205 GVG F Sbjct: 169 GVGYSF 174 >gi|148976914|ref|ZP_01813569.1| hypothetical outer membrane protein OmpA [Vibrionales bacterium SWAT-3] gi|145963788|gb|EDK29048.1| hypothetical outer membrane protein OmpA [Vibrionales bacterium SWAT-3] Length = 180 Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%) Query: 73 HHNAGGSIFAGYNVEDSCIMYGVEGDVR-YTVPVLADNIHSLHGIGGSLRIRGGYEVSDS 131 + +F GY++ D+ + G + Y + +A + L+ G V+DS Sbjct: 51 DSDTSYGLFVGYHIVDTLAIEGGYNYLGEYDLKDIAGGSYEASSFDVVLKASG--NVTDS 108 Query: 132 LLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVARLEYR-ASKYSKV 190 L LYA G V G E + T G E ++ ++ +EY+ V Sbjct: 109 LALYAKGGFAVYDWKANGPGVESDDSGVTPTIAFGSEYS-ITSAMKVGIEYQLYQDIGGV 167 Query: 191 EGFYNTISL 199 + ++L Sbjct: 168 DIDSFNVAL 176 >gi|328473467|gb|EGF44315.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329] Length = 319 Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 51/158 (32%), Gaps = 22/158 (13%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + + F GY D +E V Sbjct: 23 YVGGKMGKSWLEDACVAGQSCDKDGSTLGAFVGYEFND---YIALEAGFD-NVGDFDQTS 78 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 H +L + ++ + LY VG G+ +G GVE Sbjct: 79 FGGHVEAITLAPKFSLPITQDIALYGKVGGAY-----VMFDGKDDYSYLG---AAGVEFN 130 Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 LS+++ AR EY+ + S + N+ +LGV KF Sbjct: 131 -LSQNVTARAEYQTITDISNNVSKAAGNSATLGVSFKF 167 >gi|157369727|ref|YP_001477716.1| outer membrane protein X [Serratia proteamaculans 568] gi|157321491|gb|ABV40588.1| virulence-related outer membrane protein [Serratia proteamaculans 568] Length = 172 Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 5/124 (4%) Query: 84 YNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVA 143 Y E GV G + ++N + S+ Y +D +Y VG Sbjct: 52 YRYEFDNNPLGVIGSFTHVEKNGSENGYYGKAQYNSITAGPAYRFNDWASIYGVVGVGYG 111 Query: 144 QKYETGKAGEIT--PIAIGGTAGVGVEVGGLSESLVARLEYRASKYSKVEGFYNTISLGV 201 + + + G G T G G++ + + + + Y S+ V+ ++ GV Sbjct: 112 KNIDNAQNGSDRNGSSDYGFTYGAGLQFNPIQD-VALDVGYEQSRIRSVDVGIWSV--GV 168 Query: 202 GMKF 205 G +F Sbjct: 169 GYRF 172 >gi|260777303|ref|ZP_05886197.1| putative outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606969|gb|EEX33243.1| putative outer membrane protein [Vibrio coralliilyticus ATCC BAA-450] Length = 196 Score = 34.6 bits (78), Expect = 8.8, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 17/157 (10%) Query: 60 LSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGS 119 + Y ++ + +F GY D + +EG + + + + Sbjct: 46 GNGSYKLDLEDD--DSTAAKLFVGYQFND---YFAIEGSLGGYDAIDGSYVSIGDMTFLA 100 Query: 120 LRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVGGLSESLVAR 179 + +G + D L+ G ++ AI G G G E +S+++ Sbjct: 101 TQAKGILPIGDRFNLFVKGGIAYFGAEFKTSYATVSDEAITGMYGAGAEF-AISKNIKLS 159 Query: 180 LEYRA-----------SKYSKVEGFYNTISLGVGMKF 205 E+ ++ VE T+SLG+ F Sbjct: 160 AEFDYIRPELEVVKIGNETLSVESDITTLSLGLSYHF 196 >gi|322689645|ref|YP_004209379.1| hypothetical protein BLIF_1462 [Bifidobacterium longum subsp. infantis 157F] gi|320460981|dbj|BAJ71601.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 573 Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 6/116 (5%) Query: 5 FLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALY 64 + S L S Q PV + P + G Y + A Sbjct: 17 TMTACSSPFGLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAGV 74 Query: 65 NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + + ++Y D R A+ I + G SL Sbjct: 75 QSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 126 >gi|46190305|ref|ZP_00206420.1| hypothetical protein Blon03001605 [Bifidobacterium longum DJO10A] Length = 312 Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 27/95 (28%), Gaps = 5/95 (5%) Query: 26 PVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYN 85 P + G Y + A A GS AG+N Sbjct: 5 APVEQQAQRVYTNPQGPAD-DAQPETIVKGFYDAMPAGVQSDGYRVAREFLTGSASAGWN 63 Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 + + ++Y D R A+ I + G SL Sbjct: 64 GDSAALVYSGTPDFR----RRANTISAPQGAESSL 94 >gi|254295038|ref|YP_003061061.1| TonB-dependent receptor [Hirschia baltica ATCC 49814] gi|254043569|gb|ACT60364.1| TonB-dependent receptor [Hirschia baltica ATCC 49814] Length = 911 Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 3/78 (3%) Query: 59 GLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVE-GDVRYTVPVLADNIHSLHGI- 116 GL Y +F G A Y S Y E V Y + L++N +SL G Sbjct: 761 GLEIGYRQAFDNLPSPFDGLGAEASYTYVSSDANYENELTGVSYGLEGLSENSYSLVGFY 820 Query: 117 -GGSLRIRGGYEVSDSLL 133 G ++ R Y D L Sbjct: 821 EKGPVQARLAYTYRDPFL 838 >gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163] gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein [Pectobacterium wasabiae WPP163] Length = 361 Score = 34.6 bits (78), Expect = 9.3, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 69/220 (31%), Gaps = 35/220 (15%) Query: 4 LFLAVGVSSLALASFCS-AQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSA 62 + ++ALASF + AQAA + GG+ V + G Y Sbjct: 1 MKKTAIAVAVALASFATIAQAAPKDNTWYTGGKLGV----------SQFHDTGFY---GN 47 Query: 63 LYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRI 122 Y G G F GY + G E + + + S + Sbjct: 48 GYTGVVNNPIKSKLGAGAFVGY---QANPYLGFELGYDWLGRMKYAGSDTNAADSASFKA 104 Query: 123 -------RGGYEVSDSLLLYATVGP----DVAQKYETGKAGEITPIAIGGTAGVGVEVGG 171 + Y V L +Y +G + +G + A VG+E Sbjct: 105 QGIQLATKLSYPVMPDLDVYTRLGGLVWRTDSHADRSGTHLNNNDTGVSPLAAVGIEY-A 163 Query: 172 LSESLVARLEYRAS----KYSKVEGFYNTI--SLGVGMKF 205 + ++ R++Y+ V + + S+G+ +F Sbjct: 164 IDKNWATRVDYQWVSNIGDAGTVGARPDNLLMSVGLSYRF 203 >gi|255599812|ref|XP_002537315.1| conserved hypothetical protein [Ricinus communis] gi|223516758|gb|EEF25067.1| conserved hypothetical protein [Ricinus communis] Length = 152 Score = 34.6 bits (78), Expect = 9.3, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 14/100 (14%) Query: 70 EEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLR-------- 121 + + A G IF GY + + +GVE YT +D ++ +G+ GS R Sbjct: 52 DSDGYKASGKIFGGYEFDQN---WGVEA--GYTDFRNSDFNYTANGVNGSGRTKGNSYYV 106 Query: 122 -IRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIG 160 + V+D +Y +G +++ A + G Sbjct: 107 AGKYNVPVNDQFSVYGKLGLQHSERKLESAALNLKDTDTG 146 >gi|225025701|ref|ZP_03714893.1| hypothetical protein EIKCOROL_02603 [Eikenella corrodens ATCC 23834] gi|224941482|gb|EEG22691.1| hypothetical protein EIKCOROL_02603 [Eikenella corrodens ATCC 23834] Length = 193 Score = 34.6 bits (78), Expect = 9.4, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 16/93 (17%) Query: 126 YEVSDSLLLYATVGPDVAQKYETGKAG----------EITPIAIGGTAGVGVEVGGLSES 175 ++++ + Y + + T +G AGVG + ++++ Sbjct: 104 FDLNAPVKPYVGGRVALNRVSFDTTENGTGYTEHYHHRETKTGVGIVAGVGYD---ITQN 160 Query: 176 LVARLEYRASKYSKVEG---FYNTISLGVGMKF 205 + YR + + K +G + +S GV +KF Sbjct: 161 IALDAGYRYNYWGKFDGVKVDSHEVSAGVRVKF 193 >gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans D7S-1] Length = 356 Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 64/204 (31%), Gaps = 42/204 (20%) Query: 41 IATNRYVPIRHDFNGPYAGLSALYNGSF---------------GEEAHHNAGGSIFAGYN 85 +AT + + YAG A + G+ ++ IFAGY Sbjct: 18 VATIVQAAPQAN--TFYAGAKAGWASVRHGLNQYQYEQDGTVVGKAKKNSEAYGIFAGYQ 75 Query: 86 VEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQK 145 + D+ + A + G SL ++ Y V +L LYA G + + Sbjct: 76 ITDNFAVEAGYEFFGRGKVKEATGEKRITAHGSSLSLKASYPVLHNLDLYARAGAALIRV 135 Query: 146 YETGKAGEITPIAIGGTA----GVGVEVGGLSESLVARLEY----RASKYSKVEGFYN-- 195 T G+E L E L RLEY R + K E N Sbjct: 136 DYKDNTFGETHKFHDLKVSPVFAGGLEYAILPE-LALRLEYQWVSRVGNFGKAERKANYY 194 Query: 196 --------------TISLGVGMKF 205 +++LG+ +F Sbjct: 195 ENNESDVRYSPDIGSVALGLSYRF 218 >gi|148273952|ref|YP_001223513.1| putative exporter [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831882|emb|CAN02852.1| conserved membrane protein, putative exporter [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 342 Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 17/32 (53%) Query: 53 FNGPYAGLSALYNGSFGEEAHHNAGGSIFAGY 84 ++ Y GL+ ++ G + + GG FAGY Sbjct: 41 WSAFYIGLALIFGVGIGFTSGWDFGGQYFAGY 72 >gi|28897538|ref|NP_797143.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|153839084|ref|ZP_01991751.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] gi|260364598|ref|ZP_05777200.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] gi|260878297|ref|ZP_05890652.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|260898127|ref|ZP_05906623.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|260901940|ref|ZP_05910335.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|28805750|dbj|BAC59027.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633] gi|149747422|gb|EDM58382.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810] gi|308086135|gb|EFO35830.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466] gi|308090168|gb|EFO39863.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034] gi|308106787|gb|EFO44327.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037] gi|308115125|gb|EFO52665.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030] Length = 319 Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 51/158 (32%), Gaps = 22/158 (13%) Query: 57 YAGLSALYNG------SFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNI 110 Y G + + + F GY D +E V Sbjct: 23 YVGGKMGKSWLEDACVAGQSCDKDGSTLGAFVGYEFND---YIALEAGFD-NVGDFDQTS 78 Query: 111 HSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYETGKAGEITPIAIGGTAGVGVEVG 170 H +L + ++ + LY VG G+ +G GVE Sbjct: 79 FGGHVEAITLAPKFSLPITQDIALYGKVGGAY-----VMFDGKDDYSYLG---AAGVEFN 130 Query: 171 GLSESLVARLEYRA-SKYSK--VEGFYNTISLGVGMKF 205 LS+++ AR EY+ + S + N+ +LGV KF Sbjct: 131 -LSQNVTARAEYQTITDISNNVSKAAGNSATLGVSFKF 167 >gi|23464660|ref|NP_695263.1| hypothetical protein BL0032 [Bifidobacterium longum NCC2705] gi|81754697|sp|Q8G849|LPQB_BIFLO RecName: Full=Lipoprotein lpqB; Flags: Precursor gi|23325220|gb|AAN23899.1| hypothetical protein BL0032 [Bifidobacterium longum NCC2705] Length = 576 Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 6/117 (5%) Query: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGLSAL 63 + + S L S Q PV + P + G Y + A Sbjct: 19 VTMTACSSPFDLPISGSVQTLAPVEQQTQRVYTN-PQGPAD-DAQPETIVKGFYDAMPAG 76 Query: 64 YNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSLHGIGGSL 120 A GS AG+N + + ++Y D R A+ I + G SL Sbjct: 77 VQSDGYRVAREFLTGSASAGWNGDSAALVYSGTPDFR----RRANTISAPQGAESSL 129 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.309 0.137 0.395 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,895,005,250 Number of Sequences: 14124377 Number of extensions: 164046863 Number of successful extensions: 748136 Number of sequences better than 10.0: 3959 Number of HSP's better than 10.0 without gapping: 602 Number of HSP's successfully gapped in prelim test: 3554 Number of HSP's that attempted gapping in prelim test: 722381 Number of HSP's gapped (non-prelim): 19212 length of query: 205 length of database: 4,842,793,630 effective HSP length: 132 effective length of query: 73 effective length of database: 2,978,375,866 effective search space: 217421438218 effective search space used: 217421438218 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 78 (34.6 bits)