PSIBLAST alignment of GI: 254780598 and protein with PDB id: 1qjp
>gi|9256903|pdb|1QJP|A Chain A, High Resolution Structure Of The Outer Membrane Protein A (Ompa) Transmembrane Domain Length = 171
Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 11/173 (6%)
Query: 40 TIATNRYVPIRHDFNGPYAGLSALYNGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDV 99
Y + ++ + + G + G F GY V +
Sbjct: 2 PKDNTWYTGAKLGWSQYHDT---GLINNNGPTHENKLGAGAFGGYQVNPYVGFEMGYDWL 58
Query: 100 RYTVPVLADNIHSLHGIGGSLRIRGGYEVSDSLLLYATVGPDVAQKYE-TGKAGEITPIA 158
+ + G L + GY ++D L +Y +G V + + G+
Sbjct: 59 GRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTYSNVYGKNHDTG 118
Query: 159 IGGTAGVGVEVGGLSESLVARLEYRAS----KYSKVEGFYNT--ISLGVGMKF 205
+ GVE ++ + RLEY+ + + + +SLGV +F
Sbjct: 119 VSPVFAGGVEY-AITPEIATRLEYQWTNNIGDAHTIGTRPDNGMLSLGVSYRF 170