RPSBLAST alignment of GI: 254780598 and SCOP domain: d1p4ta_

Alignment

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 26/157 (16%), Positives = 46/157 (29%), Gaps = 12/157 (7%)

Query: 55  GPYAGLSALY-NGSFGEEAHHNAGGSIFAGYNVEDSCIMYGVEGDVRYTVPVLADNIHSL 113
           G Y    A +   S    +       I AGY + D         D        A +    
Sbjct: 5   GFYVQADAAHAKASSSLGSAKGFSPRISAGYRIND----LRFAVDYTRYKNYKAPS-TDF 59

Query: 114 HGIGGSLRIRGGYEVSDSLLLYATVGPDVAQ-KYETGKAGEITPIAIGGTAGVGVEVGGL 172
                       ++    +  Y      + +   + G +   +  +IG     GV    +
Sbjct: 60  KLYSIGASAIYDFDTQSPVKPYLGARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSYA-V 118

Query: 173 SESLVARLEYRASKYSKVEG----FYNTISLGVGMKF 205
           + ++     YR +   KV          +S GV +KF
Sbjct: 119 TPNVDLDAGYRYNYIGKVNTVKNVRSGELSAGVRVKF 155

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: OMPA-like
family: Outer membrane protein
domain: Outer membrane protein NspA
species: Neisseria meningitidis [TaxId: 487]