HHsearch alignment for GI: 254780600 and conserved domain: KOG3240

>KOG3240 consensus.
Probab=99.51  E-value=3.5e-12  Score=88.40  Aligned_cols=136  Identities=22%  Similarity=0.302  Sum_probs=87.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             00164799999999999999999852445545421479999999999999986649999971871256888998998876
Q gi|254780600|r    5 SYNIPNMLTYGRILVVPLIVLCFFIQEIGSFTSPNLMRWIALSLFTIASITDFFDGYLARVWNQTSNIGRMLDPIADKLL   84 (200)
Q Consensus         5 ~~~lpN~lT~~Ri~l~p~~~~~~~~~~~~~~~~~~~~~~~a~~lf~~a~~tD~lDG~iAR~~n~~S~~G~~lDp~aDki~   84 (200)
T Consensus        12 ~~~iPN~iGY~RI~lai--isf~vm~~---------~p~~~~~lY~~S~lLDAfDG~aAR~~NQ~S~fGA~LDmvTDR~s   80 (218)
T KOG3240          12 FLYIPNLIGYMRIVLAI--LSFYVMSS---------NPTTFSVLYLLSSLLDAFDGWAARKLNQVSRFGAMLDMVTDRCS   80 (218)
T ss_pred             EEEECCHHHHHHHHHHH--HHHHHHCC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             89844056499999999--99999526---------93389999999877876527999987204258899999987762


Q ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHH--HHHHHHHHHHHHHH-------HHCCCCCCCHH-----------HHHHHHHHHH
Q ss_conf             5546789886433104741123454--23455433456788-------52066663025-----------6889999999
Q gi|254780600|r   85 ISSVLLLMTADGTINRYSIWAAITI--LCREILVSGLREYL-------AELKVSVPVTR-----------IARFKTGIQM  144 (200)
Q Consensus        85 ~~~~~~~l~~~~~~~~~~~w~~ili--i~Rei~i~~lr~~~-------~~~~~~i~~~~-----------~GK~kT~~q~  144 (200)
T Consensus        81 t~~LL~~L~~-----~Yp~~l~~fqL~~~lDiaSHwlhm~st~l~G~sSHK~v~~~~n~llrLYY~~r~vL~~~C~~nE~  155 (218)
T KOG3240          81 TACLLVFLCQ-----FYPPYLVFFQLSMALDIASHWLHMHSTVLVGKSSHKDVDDSTNWLLRLYYTNRDVLFTICAGNEL  155 (218)
T ss_pred             HHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHH
T ss_conf             6999999999-----85238899999999999999999999998063214545666662678886376411025554799


Q ss_pred             HHHHHHHHHHHC
Q ss_conf             999999964200
Q gi|254780600|r  145 ISIGFLLAGPAC  156 (200)
Q Consensus       145 ~~i~~~L~~~~~  156 (200)
T Consensus       156 Fyi~LYl~~f~~  167 (218)
T KOG3240         156 FYILLYLLAFSQ  167 (218)
T ss_pred             HHHHHHHHHCCC
T ss_conf             999999998278