HHsearch alignment for GI: 254780600 and conserved domain: KOG3240
>KOG3240 consensus.
Probab=99.51 E-value=3.5e-12 Score=88.40 Aligned_cols=136 Identities=22% Similarity=0.302 Sum_probs=87.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 00164799999999999999999852445545421479999999999999986649999971871256888998998876
Q gi|254780600|r 5 SYNIPNMLTYGRILVVPLIVLCFFIQEIGSFTSPNLMRWIALSLFTIASITDFFDGYLARVWNQTSNIGRMLDPIADKLL 84 (200)
Q Consensus 5 ~~~lpN~lT~~Ri~l~p~~~~~~~~~~~~~~~~~~~~~~~a~~lf~~a~~tD~lDG~iAR~~n~~S~~G~~lDp~aDki~ 84 (200)
T Consensus 12 ~~~iPN~iGY~RI~lai--isf~vm~~---------~p~~~~~lY~~S~lLDAfDG~aAR~~NQ~S~fGA~LDmvTDR~s 80 (218)
T KOG3240 12 FLYIPNLIGYMRIVLAI--LSFYVMSS---------NPTTFSVLYLLSSLLDAFDGWAARKLNQVSRFGAMLDMVTDRCS 80 (218)
T ss_pred EEEECCHHHHHHHHHHH--HHHHHHCC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89844056499999999--99999526---------93389999999877876527999987204258899999987762
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHH--HHHHHHHHHHHHHH-------HHCCCCCCCHH-----------HHHHHHHHHH
Q ss_conf 5546789886433104741123454--23455433456788-------52066663025-----------6889999999
Q gi|254780600|r 85 ISSVLLLMTADGTINRYSIWAAITI--LCREILVSGLREYL-------AELKVSVPVTR-----------IARFKTGIQM 144 (200)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~w~~ili--i~Rei~i~~lr~~~-------~~~~~~i~~~~-----------~GK~kT~~q~ 144 (200)
T Consensus 81 t~~LL~~L~~-----~Yp~~l~~fqL~~~lDiaSHwlhm~st~l~G~sSHK~v~~~~n~llrLYY~~r~vL~~~C~~nE~ 155 (218)
T KOG3240 81 TACLLVFLCQ-----FYPPYLVFFQLSMALDIASHWLHMHSTVLVGKSSHKDVDDSTNWLLRLYYTNRDVLFTICAGNEL 155 (218)
T ss_pred HHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHH
T ss_conf 6999999999-----85238899999999999999999999998063214545666662678886376411025554799
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999964200
Q gi|254780600|r 145 ISIGFLLAGPAC 156 (200)
Q Consensus 145 ~~i~~~L~~~~~ 156 (200)
T Consensus 156 Fyi~LYl~~f~~ 167 (218)
T KOG3240 156 FYILLYLLAFSQ 167 (218)
T ss_pred HHHHHHHHHCCC
T ss_conf 999999998278