RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780600|ref|YP_003065013.1|
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
[Candidatus Liberibacter asiaticus str. psy62]
         (200 letters)



>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase,
           translation termination, ATP-binding, cytoplasm,
           hydrolase, membrane; 2.80A {Schizosaccharomyces pombe}
           (A:1-326)
          Length = 326

 Score = 24.7 bits (53), Expect = 8.0
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 8/30 (26%)

Query: 142 IQMISIGFLLAGPA----CENQTSYITGTG 167
           IQ  ++  LL+ P      ++Q    +GTG
Sbjct: 145 IQEKALPLLLSNPPRNMIGQSQ----SGTG 170


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.327    0.141    0.423 

Gapped
Lambda     K      H
   0.267   0.0499    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 1,523,073
Number of extensions: 63623
Number of successful extensions: 150
Number of sequences better than 10.0: 1
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 4,956,049
Length adjustment: 84
Effective length of query: 116
Effective length of database: 2,116,429
Effective search space: 245505764
Effective search space used: 245505764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.4 bits)