HHsearch alignment for GI: 254780601 and conserved domain: COG1199

Probab=99.46  E-value=4.4e-10  Score=87.02  Aligned_cols=85  Identities=21%  Similarity=0.329  Sum_probs=62.8

Q ss_pred             HHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCCCCCCC
Q ss_conf             420010235641677513023345655555422666-3010489999999999866544881-49985386500145788
Q gi|254780601|r  235 IVNILRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQ-VVALSGELSQQERSNALQMMRDGRA-RVCIATDVAARGIDLPD  312 (573)
Q Consensus       235 l~~ll~~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~-~~~lhg~~~q~~R~~~~~~fr~g~~-~vLV~TDvaaRGiDi~~  312 (573)
T Consensus       471 i~~~~~~-~~~~~lvlF~Sy~~l~~~~~~~~~~~~~~~v~~q~~---~~~~~~l~~f~~~~~~~~lv~~gsf~EGVD~~g  546 (654)
T COG1199         471 LREILKA-SPGGVLVLFPSYEYLKRVAERLKDERSTLPVLTQGE---DEREELLEKFKASGEGLILVGGGSFWEGVDFPG  546 (654)
T ss_pred             HHHHHHH-CCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCC---CCHHHHHHHHHHCCCCEEEEEECCEECCEECCC
T ss_conf             9999974-799889991789999999998651164533445687---846999999971478649997233103151688


Q ss_pred             --CCEEEEECCCC
Q ss_conf             --73389705887
Q gi|254780601|r  313 --LELVIHAELSS  323 (573)
Q Consensus       313 --v~~Vin~d~P~  323 (573)
T Consensus       547 ~~l~~vvI~~lPf  559 (654)
T COG1199         547 DALRLVVIVGLPF  559 (654)
T ss_pred             CCEEEEEEEECCC
T ss_conf             7657999982689