HHsearch alignment for GI: 254780601 and conserved domain: COG4962

>COG4962 CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].
Probab=94.96  E-value=0.055  Score=32.55  Aligned_cols=58  Identities=24%  Similarity=0.261  Sum_probs=28.2

Q ss_pred             CEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCC--CCCEEEEECCCCC
Q ss_conf             759982231013321000122464318999613110010012357888752143--3422563111122
Q gi|254780601|r  125 AHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPK--KRRMLMFSATISP  191 (573)
Q Consensus       125 ~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~p~--~~q~~l~SAT~~~  191 (573)
T Consensus        60 ~dImVn~~~~v~v~~-~~~~~--~t~irf~d~~~l------~~ii~ria~~vgrriD~~~P~~darLpd  119 (355)
T COG4962          60 EDIMVNGPGRVFVER-KGGLE--PTDIRFLDEAAL------LRIIQRIAAAVGRRIDESQPIVDARLPD  119 (355)
T ss_pred             EEEEECCCCCEEEEE-CCCCC--CCCCCCCCHHHH------HHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf             168862787389993-27454--578624898999------9999999998588104689636526798