HHsearch alignment for GI: 254780601 and conserved domain: KOG0341
>KOG0341 consensus.
Probab=100.00 E-value=0 Score=602.93 Aligned_cols=361 Identities=32% Similarity=0.487 Sum_probs=327.2
Q ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC--CCCCCEEEEECCCH
Q ss_conf 9889999999787987898999999999759969999289874689999999998610421225--56882799984998
Q gi|254780601|r 7 IPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFS--PASAPLALAIAPTR 84 (573)
Q Consensus 7 l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~--~~~~~~~lil~PTr 84 (573)
T Consensus 177 FP~~~L~~lk~KGI~~PTpIQvQGlPvvLsGRDmIGIAfTGSGKTlvFvLP~imf~LeqE~~lPf~~~EGP~gLiicPSR 256 (610)
T KOG0341 177 FPKPLLRGLKKKGIVHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPVIMFALEQEMMLPFARGEGPYGLIICPSR 256 (610)
T ss_pred CCHHHHHHHHHCCCCCCCCEEECCCCEEEECCCEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEECCCH
T ss_conf 97899999986588899863333751475157526678606884688709999999988851860037897358973708
Q ss_pred HHHHHHHHHHHHHHHH------CCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 9999999999998544------6987999988998799999612897599822310133210001224643189996131
Q gi|254780601|r 85 ELAVQVGRELEWLYAK------TGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEAD 158 (573)
Q Consensus 85 ELa~Qv~~~~~~l~~~------~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD 158 (573)
T Consensus 257 ELArQt~~iie~~~~~L~e~g~P~lRs~LciGG~~v~eql~~v~~GvHivVATPGRL~DmL~KK~~sLd~CRyL~lDEAD 336 (610)
T KOG0341 257 ELARQTHDIIEQYVAALQEAGYPELRSLLCIGGVPVREQLDVVRRGVHIVVATPGRLMDMLAKKIMSLDACRYLTLDEAD 336 (610)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999999999999998764884665665216853898999986370699817626899998764048887776531477
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHC
Q ss_conf 10010012357888752143342256311112220011112101233332333232566520000000000024554200
Q gi|254780601|r 159 EMLDLGFRDDIEFILDSSPKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNI 238 (573)
Q Consensus 159 ~ml~~gf~~~i~~i~~~~p~~~q~~l~SAT~~~~i~~l~~~~~~~p~~i~~~~~~~~~~~i~~~~~~v~~~~k~~~l~~l 238 (573)
T Consensus 337 RmiDmGFEddir~iF~~FK~QRQTLLFSATMP~KIQ~FAkSALVKPvtvNVGRAGAAsldViQevEyVkqEaKiVylLeC 416 (610)
T KOG0341 337 RMIDMGFEDDIRTIFSFFKGQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASLDVIQEVEYVKQEAKIVYLLEC 416 (610)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77605632668999999742022355312464889988876405645884255542202088999999863012069987
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 10235641677513023345655555422666301048999999999986654488149985386500145788733897
Q gi|254780601|r 239 LRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIH 318 (573)
Q Consensus 239 l~~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin 318 (573)
T Consensus 417 LQKT~-PpVLIFaEkK~DVD~IhEYLLlKGVEavaIHGGKDQedR~~ai~afr~gkKDVLVATDVASKGLDFp~iqHVIN 495 (610)
T KOG0341 417 LQKTS-PPVLIFAEKKADVDDIHEYLLLKGVEAVAIHGGKDQEDRHYAIEAFRAGKKDVLVATDVASKGLDFPDIQHVIN 495 (610)
T ss_pred HCCCC-CCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCHHHCC
T ss_conf 61279-96699841456747899999872513687416865667888999986578745887310003689745044404
Q ss_pred ECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHH----HHHHHHHHHHHHCCCC
Q ss_conf 0588747899986030103788860256405999----9999999998506641
Q gi|254780601|r 319 AELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNM----QRRAERLFREANVSVV 368 (573)
Q Consensus 319 ~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e----~~~~~~i~~~~~~~~~ 368 (573)
T Consensus 496 yDMP~eIENYVHRIGRTGRsg~~GiATTfINK~~~esvLlDLK~LL~EakQ~vP 549 (610)
T KOG0341 496 YDMPEEIENYVHRIGRTGRSGKTGIATTFINKNQEESVLLDLKHLLQEAKQEVP 549 (610)
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 788088999999712467788864022211456318889879999998651088