HHsearch alignment for GI: 254780601 and conserved domain: KOG0347
>KOG0347 consensus.
Probab=100.00 E-value=0 Score=621.09 Aligned_cols=374 Identities=32% Similarity=0.473 Sum_probs=331.9
Q ss_pred CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCCC-----CCCCCCCE--E
Q ss_conf 99889999999787987898999999999759-9699992898746899999999986104212-----25568827--9
Q gi|254780601|r 6 NIPQVIGEALSERGYVNLTSVQEAILNPDLRE-KDVLVSAQTGSGKTVAFGLALASTLLAENDR-----FSPASAPL--A 77 (573)
Q Consensus 6 ~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g-~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~-----~~~~~~~~--~ 77 (573)
T Consensus 187 ~lp~~iL~aL~~~gFs~Pt~IQsl~lp~ai~gk~DIlGaAeTGSGKTLAFGIPiv~~l~~~s~~s~e~~~~~~k~~k~~~ 266 (731)
T KOG0347 187 FLPMEILRALSNLGFSRPTEIQSLVLPAAIRGKVDILGAAETGSGKTLAFGIPIVERLLESSDDSQELSNTSAKYVKPIA 266 (731)
T ss_pred CCCHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCHHCCCCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCEE
T ss_conf 98999999998647899861044116676546300003334688742441232545433036537654467760576403
Q ss_pred EEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCC---CCCCCEEEEE
Q ss_conf 9984998999999999999854469879999889987999996128975998223101332100012---2464318999
Q gi|254780601|r 78 LAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKGL---NISHLKAVVL 154 (573)
Q Consensus 78 lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l---~l~~v~~lVl 154 (573)
T Consensus 267 LV~tPTRELa~QV~~Hl~ai~~~t~i~v~si~GGLavqKQqRlL~~~p~IVVATPGRlweli~e~n~~l~~~k~vkcLVl 346 (731)
T KOG0347 267 LVVTPTRELAHQVKQHLKAIAEKTQIRVASITGGLAVQKQQRLLNQRPDIVVATPGRLWELIEEDNTHLGNFKKVKCLVL 346 (731)
T ss_pred EEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCEEEEE
T ss_conf 89637099999999999986134672788752305799999998529987993662899999751066642332407887
Q ss_pred ECCCCCCCCHHHHHHHHHHHHCC-----CCCCEEEEECCCCCC---------------------CHHHHHH--HCCCCCC
Q ss_conf 61311001001235788875214-----334225631111222---------------------0011112--1012333
Q gi|254780601|r 155 DEADEMLDLGFRDDIEFILDSSP-----KKRRMLMFSATISPA---------------------ITTLAKN--YQKDAVR 206 (573)
Q Consensus 155 DEaD~ml~~gf~~~i~~i~~~~p-----~~~q~~l~SAT~~~~---------------------i~~l~~~--~~~~p~~ 206 (573)
T Consensus 347 DEaDRmvekghF~Els~lL~~L~e~~~~~qrQTlVFSATlt~~~~~~~~~~~k~~~k~~~~~~kiq~Lmk~ig~~~kpki 426 (731)
T KOG0347 347 DEADRMVEKGHFEELSKLLKHLNEEQKNRQRQTLVFSATLTLVLQQPLSSSRKKKDKEDELNAKIQHLMKKIGFRGKPKI 426 (731)
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 34777755110999999999860311051012589987763332170577654221145566799999998475689826
Q ss_pred CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 32333232566520000000000024554200102356416775130233456555554226663010489999999999
Q gi|254780601|r 207 VNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNA 286 (573)
Q Consensus 207 i~~~~~~~~~~~i~~~~~~v~~~~k~~~l~~ll~~~~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~ 286 (573)
T Consensus 427 iD~t~q~~ta~~l~Es~I~C~~~eKD~ylyYfl~ry-PGrTlVF~NsId~vKRLt~~L~~L~i~p~~LHA~M~QKqRLkn 505 (731)
T KOG0347 427 IDLTPQSATASTLTESLIECPPLEKDLYLYYFLTRY-PGRTLVFCNSIDCVKRLTVLLNNLDIPPLPLHASMIQKQRLKN 505 (731)
T ss_pred EECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC-CCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 766820447888887763588544540689988636-9835998411889999999974169997102577889999876
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCC
Q ss_conf 86654488149985386500145788733897058874789998603010378886025640599999999999985066
Q gi|254780601|r 287 LQMMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLFREANVS 366 (573)
Q Consensus 287 ~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e~~~~~~i~~~~~~~ 366 (573)
T Consensus 506 LEkF~~~~~~VLiaTDVAARGLDIp~V~HVIHYqVPrtseiYVHRSGRTARA~~~Gvsvml~~P~e~~~~~KL~ktL~k~ 585 (731)
T KOG0347 506 LEKFKQSPSGVLIATDVAARGLDIPGVQHVIHYQVPRTSEIYVHRSGRTARANSEGVSVMLCGPQEVGPLKKLCKTLKKK 585 (731)
T ss_pred HHHHHCCCCEEEEEEHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHC
T ss_conf 99874488817996234442588878636789606875324676266532256788379986817757899999987323
Q ss_pred CCCCCCCCHHHHHH
Q ss_conf 41056899999888
Q gi|254780601|r 367 VVWEPAPSVEAIRE 380 (573)
Q Consensus 367 ~~~~~~Ps~eeI~~ 380 (573)
T Consensus 586 ~dlpifPv~~~~m~ 599 (731)
T KOG0347 586 EDLPIFPVETDIMD 599 (731)
T ss_pred CCCCCEECCHHHHH
T ss_conf 67773002178999