HHsearch alignment for GI: 254780601 and conserved domain: KOG0350
>KOG0350 consensus.
Probab=100.00 E-value=0 Score=517.20 Aligned_cols=355 Identities=30% Similarity=0.454 Sum_probs=310.1
Q ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHC---------CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf 988999999978798789899999999975---------99699992898746899999999986104212255688279
Q gi|254780601|r 7 IPQVIGEALSERGYVNLTSVQEAILNPDLR---------EKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLA 77 (573)
Q Consensus 7 l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~---------g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~ 77 (573)
T Consensus 144 lea~~~q~l~k~~is~~FPVQ~aVlp~ll~~~~~p~~~r~rDIcV~ApTGSGKTLaY~iPIVQ~L~~R-----~v~~LRa 218 (620)
T KOG0350 144 LEATIDQLLVKMAISRLFPVQYAVLPSLLEEIRSPPPSRPRDICVNAPTGSGKTLAYVIPIVQLLSSR-----PVKRLRA 218 (620)
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEHHHHHHHHCCC-----CCCCEEE
T ss_conf 99999999887501454505888888999861479998877547755789884566513789997038-----7340579
Q ss_pred EEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCC-C----CEEEEECCCCHHHHHH-CCCCCCCCCEE
Q ss_conf 9984998999999999999854469879999889987999996128-9----7599822310133210-00122464318
Q gi|254780601|r 78 LAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQN-G----AHIVVGTPGRLCDHIR-GKGLNISHLKA 151 (573)
Q Consensus 78 lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~~~q~~~l~~-~----~~iiv~TPgrl~d~~~-~~~l~l~~v~~ 151 (573)
T Consensus 219 vVivPtr~L~~QV~~~f~~~~~~tgL~V~~~sgq~sl~~E~~qL~~~~~~~~~DIlVaTPGRLVDHl~~~k~f~Lk~Lrf 298 (620)
T KOG0350 219 VVIVPTRELALQVYDTFKRLNSGTGLAVCSLSGQNSLEDEARQLASDPPECRIDILVATPGRLVDHLNNTKSFDLKHLRF 298 (620)
T ss_pred EEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCCCCCCHHHCEE
T ss_conf 99954799999999999985668865988601454057899997259976543669737268888604898756445357
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHCC----------------------------------CCCCEEEEECCCCCCCHHHH
Q ss_conf 99961311001001235788875214----------------------------------33422563111122200111
Q gi|254780601|r 152 VVLDEADEMLDLGFRDDIEFILDSSP----------------------------------KKRRMLMFSATISPAITTLA 197 (573)
Q Consensus 152 lVlDEaD~ml~~gf~~~i~~i~~~~p----------------------------------~~~q~~l~SAT~~~~i~~l~ 197 (573)
T Consensus 299 LVIDEADRll~qsfQ~Wl~~v~~~~~~~k~~~~~~nii~~~~~~~pt~~~e~~t~~~~~~~~l~kL~~satLsqdP~Kl~ 378 (620)
T KOG0350 299 LVIDEADRLLDQSFQEWLDTVMSLCKTMKRVACLDNIIRQRQAPQPTVLSELLTKLGKLYPPLWKLVFSATLSQDPSKLK 378 (620)
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHHCCHHHHH
T ss_conf 77525778999999988999999837740104715444101467740058777412776752676530133304968876
Q ss_pred HHHCCCCCCCCCC----CCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH----HCCC
Q ss_conf 1210123333233----3232566520000000000024554200102356416775130233456555554----2266
Q gi|254780601|r 198 KNYQKDAVRVNIA----SENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAKNAIVFCSTRASVSRFTKVLA----EHLF 269 (573)
Q Consensus 198 ~~~~~~p~~i~~~----~~~~~~~~i~~~~~~v~~~~k~~~l~~ll~~~~~~~~ivF~~t~~~~~~l~~~L~----~~g~ 269 (573)
T Consensus 379 ~l~l~~Prl~~v~~~~~~ryslp~~l~~~~vv~~~~~kpl~~~~lI~~~k~~r~lcf~~S~~sa~Rl~~~L~v~~~~~~~ 458 (620)
T KOG0350 379 DLTLHIPRLFHVSKPLIGRYSLPSSLSHRLVVTEPKFKPLAVYALITSNKLNRTLCFVNSVSSANRLAHVLKVEFCSDNF 458 (620)
T ss_pred HHHCCCCCEEEEECCCCEEEECCHHHHHCEEECCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCC
T ss_conf 53327983588622543266157554213342023554376999997740104899952468899999999998626440
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf 63010489999999999866544881499853865001457887338970588747899986030103788860256405
Q gi|254780601|r 270 QVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIP 349 (573)
Q Consensus 270 ~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~ 349 (573)
T Consensus 459 ~~s~~t~~l~~k~r~k~l~~f~~g~i~vLIcSD~laRGiDv~~v~~VINYd~P~~~ktyVHR~GRTARAgq~G~a~tll~ 538 (620)
T KOG0350 459 KVSEFTGQLNGKRRYKMLEKFAKGDINVLICSDALARGIDVNDVDNVINYDPPASDKTYVHRAGRTARAGQDGYAITLLD 538 (620)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC
T ss_conf 25565234438899999998753895299852365547760246047635898126578776022100567744789631
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999985066
Q gi|254780601|r 350 QNMQRRAERLFREANVS 366 (573)
Q Consensus 350 ~~e~~~~~~i~~~~~~~ 366 (573)
T Consensus 539 ~~~~r~F~klL~~~~~~ 555 (620)
T KOG0350 539 KHEKRLFSKLLKKTNLW 555 (620)
T ss_pred CCCCHHHHHHHHHHCCC
T ss_conf 55403799999874356