HHsearch alignment for GI: 254780601 and conserved domain: PRK05563

Probab=91.60  E-value=0.98  Score=24.12  Aligned_cols=119  Identities=16%  Similarity=0.128  Sum_probs=54.7

Q ss_pred             CEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH-HH
Q ss_conf             69999289874689-99999999861042122556882799984998999999999999854469879999889987-99
Q gi|254780601|r   39 DVLVSAQTGSGKTV-AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSV-HR  116 (573)
Q Consensus        39 d~i~~a~TGsGKT~-af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~-~~  116 (573)
T Consensus        40 ayLf~GprG~GKTs~Ari~ak--alnc~~~--------------~~~~pC~~-C~~C~~i~~g~~~Dv~Eidaas~~gvd  102 (541)
T PRK05563         40 AYLFCGTRGTGKTSTAKIFAK--AVNCLNP--------------QDGEPCNE-CEICKKINEGLLMDVIEIDAASNNGVD  102 (541)
T ss_pred             EEEEECCCCCCHHHHHHHHHH--HHCCCCC--------------CCCCCCCC-CHHHHHHHCCCCCCEEEECCCCCCCHH
T ss_conf             453038799589999999999--9579998--------------88985751-488999856898873662444447889


Q ss_pred             HHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEECCCCCCC
Q ss_conf             999612897599822310133210001224643189996131100100123578887521--43342256311112220
Q gi|254780601|r  117 ERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS--PKKRRMLMFSATISPAI  193 (573)
Q Consensus       117 q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~--p~~~q~~l~SAT~~~~i  193 (573)
T Consensus       103 ~iR~~~~~---~~~~p------------~~~~~Kv~IiDEvhmls~~a~----nallKtlEePp~~~~Filatte~~ki  162 (541)
T PRK05563        103 DIREIIEN---VKYPP------------QEGKYKVYIMDEVHMLSQGAV----NAFLKTLEEPPSNVIFILATTDPQKL  162 (541)
T ss_pred             HHHHHHHH---CEECC------------CCCCEEEEEEECCCCCCHHHH----HHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf             99999976---10487------------678705999977233899999----99999985487775699976984427