HHsearch alignment for GI: 254780601 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=92.45 E-value=0.83 Score=24.60 Aligned_cols=119 Identities=19% Similarity=0.276 Sum_probs=54.0
Q ss_pred CEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH-HH
Q ss_conf 69999289874689-99999999861042122556882799984998999999999999854469879999889987-99
Q gi|254780601|r 39 DVLVSAQTGSGKTV-AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSV-HR 116 (573)
Q Consensus 39 d~i~~a~TGsGKT~-af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~gg~~~-~~ 116 (573)
T Consensus 40 AyLFsGprG~GKTt~ArilA--k~LnC~~~---~~~~P-----Cg~-------C~sC~~i~~g~~~DviEidaasn~~Vd 102 (560)
T PRK06647 40 AYIFSGPRGVGKTSSARAFA--RCLNCVNG---PTIMP-----CGE-------CFSCKSIDNDSSLDVIEIDGASNTSVQ 102 (560)
T ss_pred EEEEECCCCCCHHHHHHHHH--HHHCCCCC---CCCCC-----CCC-------CHHHHHHHCCCCCCEEEECCCCCCCHH
T ss_conf 36632899878999999999--99659999---99888-----878-------878888745999875764364548889
Q ss_pred HHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEECCCCCCC
Q ss_conf 999612897599822310133210001224643189996131100100123578887521--43342256311112220
Q gi|254780601|r 117 ERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS--PKKRRMLMFSATISPAI 193 (573)
Q Consensus 117 q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~--p~~~q~~l~SAT~~~~i 193 (573)
T Consensus 103 dIR~l~e~v~~---~P------------~~~~yKV~IIDEahmLt~~A~----NALLKtLEEPP~~~~FILaTte~~KI 162 (560)
T PRK06647 103 DVRQIKEEIMF---PP------------ASSRYRVYIIDEVHMLSNSAF----NALLKTIEEPPPYIVFIFATTEVHKL 162 (560)
T ss_pred HHHHHHHHHCC---CC------------CCCCEEEEEECCHHHCCHHHH----HHHHHHHHCCCCCEEEEEECCCHHHC
T ss_conf 99999998632---87------------668706999646565599999----99999863488755999977994768