HHsearch alignment for GI: 254780601 and conserved domain: PRK08058

>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=90.28  E-value=1.4  Score=23.15  Aligned_cols=119  Identities=18%  Similarity=0.217  Sum_probs=53.1

Q ss_pred             CCEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEE-CCCCH-
Q ss_conf             969999289874689-999999998610421225568827999849989999999999998544698799998-89987-
Q gi|254780601|r   38 KDVLVSAQTGSGKTV-AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCI-GGVSV-  114 (573)
Q Consensus        38 ~d~i~~a~TGsGKT~-af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~-gg~~~-  114 (573)
T Consensus        29 HA~Lf~Gp~G~GK~~~A~~--~A~~LlC~~~~~~~---~C-----------g-~C~~C~~~~~~~HPD~~~i~p~~~~i~   91 (329)
T PRK08058         29 HAYLFEGAKGTGKKATALW--LAKSLFCLERNGVE---PC-----------G-TCTNCKRIESGNHPDVHLVAPDGQSIK   91 (329)
T ss_pred             CEEEEECCCCCCHHHHHHH--HHHHHCCCCCCCCC---CC-----------C-CCHHHHHHHCCCCCCEEEECCCCCCCC
T ss_conf             1565578999889999999--99997399999999---88-----------7-888999987699997677456614077


Q ss_pred             HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEECCCCCC
Q ss_conf             99999612897599822310133210001224643189996131100100123578887521--4334225631111222
Q gi|254780601|r  115 HRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS--PKKRRMLMFSATISPA  192 (573)
Q Consensus       115 ~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~--p~~~q~~l~SAT~~~~  192 (573)
T Consensus        92 idqiR~L~~--------------~~~~~p~-~g~~KV~II~~Ae~m~~----~AaNALLKtLEEPp~~t~fIL~t~~~~~  152 (329)
T PRK08058         92 KDQIRYLKE--------------EFSKSGV-ESNKKVYIIEHADKMTA----SAANSLLKFLEEPSGDTTAILLTENKHQ  152 (329)
T ss_pred             HHHHHHHHH--------------HHCCCCC-CCCCEEEEEECHHHHCH----HHHHHHHHHHHCCCCCCEEEEEECCHHH
T ss_conf             999999999--------------9643875-78867999734776299----9999999986468978679987299666