HHsearch alignment for GI: 254780601 and conserved domain: PRK08058
>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=90.28 E-value=1.4 Score=23.15 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=53.1
Q ss_pred CCEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEE-CCCCH-
Q ss_conf 969999289874689-999999998610421225568827999849989999999999998544698799998-89987-
Q gi|254780601|r 38 KDVLVSAQTGSGKTV-AFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCI-GGVSV- 114 (573)
Q Consensus 38 ~d~i~~a~TGsGKT~-af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~~~~~v~~~~-gg~~~- 114 (573)
T Consensus 29 HA~Lf~Gp~G~GK~~~A~~--~A~~LlC~~~~~~~---~C-----------g-~C~~C~~~~~~~HPD~~~i~p~~~~i~ 91 (329)
T PRK08058 29 HAYLFEGAKGTGKKATALW--LAKSLFCLERNGVE---PC-----------G-TCTNCKRIESGNHPDVHLVAPDGQSIK 91 (329)
T ss_pred CEEEEECCCCCCHHHHHHH--HHHHHCCCCCCCCC---CC-----------C-CCHHHHHHHCCCCCCEEEECCCCCCCC
T ss_conf 1565578999889999999--99997399999999---88-----------7-888999987699997677456614077
Q ss_pred HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEECCCCCC
Q ss_conf 99999612897599822310133210001224643189996131100100123578887521--4334225631111222
Q gi|254780601|r 115 HRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS--PKKRRMLMFSATISPA 192 (573)
Q Consensus 115 ~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~i~~i~~~~--p~~~q~~l~SAT~~~~ 192 (573)
T Consensus 92 idqiR~L~~--------------~~~~~p~-~g~~KV~II~~Ae~m~~----~AaNALLKtLEEPp~~t~fIL~t~~~~~ 152 (329)
T PRK08058 92 KDQIRYLKE--------------EFSKSGV-ESNKKVYIIEHADKMTA----SAANSLLKFLEEPSGDTTAILLTENKHQ 152 (329)
T ss_pred HHHHHHHHH--------------HHCCCCC-CCCCEEEEEECHHHHCH----HHHHHHHHHHHCCCCCCEEEEEECCHHH
T ss_conf 999999999--------------9643875-78867999734776299----9999999986468978679987299666