HHsearch alignment for GI: 254780601 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=95.92 E-value=0.096 Score=30.91 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHH----CC---CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 78989999999997----59---969999289874689999999998610421225568827999849989999999999
Q gi|254780601|r 22 NLTSVQEAILNPDL----RE---KDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGREL 94 (573)
Q Consensus 22 ~pt~iQ~~~ip~~l----~g---~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~ 94 (573)
T Consensus 4 ~~~PWq~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~-~A~~~A~~llc~~~~~------~---------~~~~~~~-~ 66 (319)
T PRK08769 4 AFSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRA-VALALAEHVLASGPDP------A---------LAQRTRQ-L 66 (319)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH-HHHHHHHHHHCCCCCC------C---------CCCHHHH-H
T ss_conf 55877689999999999769942068758999878999-9999999983799797------6---------5433889-9
Q ss_pred HHHHHHCCCEEEEEEC---CCC----H-HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHH
Q ss_conf 9985446987999988---998----7-9999961289759982231013321000122464318999613110010012
Q gi|254780601|r 95 EWLYAKTGVVVAVCIG---GVS----V-HRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFR 166 (573)
Q Consensus 95 ~~l~~~~~~~v~~~~g---g~~----~-~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~ 166 (573)
T Consensus 67 i~~g~HPD~~~i~~~~~~~~~k~k~~I~IdqiR~l~--------------~~~~~~p-~~g~~KV~IId~Ad~mn~---- 127 (319)
T PRK08769 67 IAAGTHPDLQLVSFIPNRTGDKLRTEIVIEQVREIS--------------QKLALTP-QYGIAQVVIVDPADAINR---- 127 (319)
T ss_pred HHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH--------------HHHHHCC-CCCCCEEEEECCHHHCCH----
T ss_conf 966899896877534444543112348699999999--------------9961372-027956999806675289----
Q ss_pred HHHHHHHHHC---CCCCCEEEEE
Q ss_conf 3578887521---4334225631
Q gi|254780601|r 167 DDIEFILDSS---PKKRRMLMFS 186 (573)
Q Consensus 167 ~~i~~i~~~~---p~~~q~~l~S 186 (573)
T Consensus 128 ~AaNalLK~LEEPp~~~~~iL~~ 150 (319)
T PRK08769 128 SACNALLKTLEEPSPGRYLWLIS 150 (319)
T ss_pred HHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 99999999822799884899986