HHsearch alignment for GI: 254780601 and conserved domain: PRK08769

>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=95.92  E-value=0.096  Score=30.91  Aligned_cols=129  Identities=19%  Similarity=0.252  Sum_probs=62.1

Q ss_pred             CCCHHHHHHHHHHH----CC---CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf             78989999999997----59---969999289874689999999998610421225568827999849989999999999
Q gi|254780601|r   22 NLTSVQEAILNPDL----RE---KDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGREL   94 (573)
Q Consensus        22 ~pt~iQ~~~ip~~l----~g---~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~   94 (573)
T Consensus         4 ~~~PWq~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~-~A~~~A~~llc~~~~~------~---------~~~~~~~-~   66 (319)
T PRK08769          4 AFSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRA-VALALAEHVLASGPDP------A---------LAQRTRQ-L   66 (319)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH-HHHHHHHHHHCCCCCC------C---------CCCHHHH-H
T ss_conf             55877689999999999769942068758999878999-9999999983799797------6---------5433889-9


Q ss_pred             HHHHHHCCCEEEEEEC---CCC----H-HHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHH
Q ss_conf             9985446987999988---998----7-9999961289759982231013321000122464318999613110010012
Q gi|254780601|r   95 EWLYAKTGVVVAVCIG---GVS----V-HRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFR  166 (573)
Q Consensus        95 ~~l~~~~~~~v~~~~g---g~~----~-~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~  166 (573)
T Consensus        67 i~~g~HPD~~~i~~~~~~~~~k~k~~I~IdqiR~l~--------------~~~~~~p-~~g~~KV~IId~Ad~mn~----  127 (319)
T PRK08769         67 IAAGTHPDLQLVSFIPNRTGDKLRTEIVIEQVREIS--------------QKLALTP-QYGIAQVVIVDPADAINR----  127 (319)
T ss_pred             HHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH--------------HHHHHCC-CCCCCEEEEECCHHHCCH----
T ss_conf             966899896877534444543112348699999999--------------9961372-027956999806675289----


Q ss_pred             HHHHHHHHHC---CCCCCEEEEE
Q ss_conf             3578887521---4334225631
Q gi|254780601|r  167 DDIEFILDSS---PKKRRMLMFS  186 (573)
Q Consensus       167 ~~i~~i~~~~---p~~~q~~l~S  186 (573)
T Consensus       128 ~AaNalLK~LEEPp~~~~~iL~~  150 (319)
T PRK08769        128 SACNALLKTLEEPSPGRYLWLIS  150 (319)
T ss_pred             HHHHHHHHHHCCCCCCEEEEEEE
T ss_conf             99999999822799884899986