HHsearch alignment for GI: 254780601 and conserved domain: PRK10536

Probab=96.18  E-value=0.11  Score=30.50  Aligned_cols=141  Identities=16%  Similarity=0.234  Sum_probs=74.0

Q ss_pred             CCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHH-------HH
Q ss_conf             98789899999999975996999928987468999999999861042122556882799984998999999-------99
Q gi|254780601|r   20 YVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQV-------GR   92 (573)
Q Consensus        20 ~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv-------~~   92 (573)
T Consensus        57 i~pkt~~Q~~yi~~i~~~~ivf~~GpAGTGKT~lA~a~Al~~l~~~~--~-----~kIIltRP~V~~ge~lGfLPGdl~E  129 (262)
T PRK10536         57 ILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKD--V-----DRIIVTRPVLQADEDLGFLPGDIAE  129 (262)
T ss_pred             CCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCC--C-----CEEEEECCCCCCCCCCCCCCCCHHH
T ss_conf             67898649999999861983999899987589999999999998588--8-----6899966787567666769898799


Q ss_pred             HHHHH----HHHCCCEEEEEECCCCHHHHHHHHCCC-CEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHH
Q ss_conf             99998----544698799998899879999961289-7599822310133210001224643189996131100100123
Q gi|254780601|r   93 ELEWL----YAKTGVVVAVCIGGVSVHRERRDLQNG-AHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRD  167 (573)
Q Consensus        93 ~~~~l----~~~~~~~v~~~~gg~~~~~q~~~l~~~-~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~  167 (573)
T Consensus       130 K~~Pyl~Pi~D~L~----~~lg~-~~~~~--~~~~e~G~Iei~-P---lafmRGrT--f~n-a~IIvDEaQN~T----~~  191 (262)
T PRK10536        130 KFAPYFRPVYDVLV----RRLGA-SFMQY--CLRPEIGKVEIA-P---FAYMRGRT--FEN-AVVILDEAQNVT----AA  191 (262)
T ss_pred             HHHHHHHHHHHHHH----HHHCH-HHHHH--HHHHHCCCEEEE-E---HHHHCCCC--CCC-EEEEEEHHHCCC----HH
T ss_conf             88788878999999----99685-99999--987305948998-7---58744775--144-289984121289----99


Q ss_pred             HHHHHHHHCCCCCCEEEE
Q ss_conf             578887521433422563
Q gi|254780601|r  168 DIEFILDSSPKKRRMLMF  185 (573)
Q Consensus       168 ~i~~i~~~~p~~~q~~l~  185 (573)
T Consensus       192 qmk~iLTRiG~~SKiVi~  209 (262)
T PRK10536        192 QMKMFLTRLGENVTVIVN  209 (262)
T ss_pred             HHHHHHHHCCCCCEEEEE
T ss_conf             998898542599689996