HHsearch alignment for GI: 254780601 and conserved domain: PRK11634
>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=96.72 E-value=0.0061 Score=38.96 Aligned_cols=46 Identities=20% Similarity=0.176 Sum_probs=22.5
Q ss_pred CCCEEEECCCCCCHHHHHHHHH-HHHHHCCCC----------------CCCCCCCCEEEEECCCHH
Q ss_conf 9969999289874689999999-998610421----------------225568827999849989
Q gi|254780601|r 37 EKDVLVSAQTGSGKTVAFGLAL-ASTLLAEND----------------RFSPASAPLALAIAPTRE 85 (573)
Q Consensus 37 g~d~i~~a~TGsGKT~af~lp~-l~~l~~~~~----------------~~~~~~~~~~lil~PTrE 85 (573)
T Consensus 74 ~pqaLIL~PT---RELA~QV~~~~~~l~~~~~~i~v~~l~GG~~~~~q~~~L~~g~~IVVgTPGRL 136 (629)
T PRK11634 74 APQILVLAPT---RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRL 136 (629)
T ss_pred CCCEEEECCC---HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECHHHH
T ss_conf 9868997899---89999999999999721799779999899778999998627999999698999