HHsearch alignment for GI: 254780601 and conserved domain: PRK11776

>PRK11776 ATP-dependent RNA helicase DbpA; Provisional.
Probab=97.02  E-value=0.0085  Score=38.00  Aligned_cols=52  Identities=10%  Similarity=-0.070  Sum_probs=21.0

Q ss_pred             CCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHH-HHHHHHHHHHHH
Q ss_conf             7887338970588747899986030103788860256405999-999999999850
Q gi|254780601|r  310 LPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNM-QRRAERLFREAN  364 (573)
Q Consensus       310 i~~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e-~~~~~~i~~~~~  364 (573)
T Consensus       214 ~~~I~q~~~~v~~~~K~~~L~~ll~~---~~~~~~IIFcntk~~v~~l~~~L~~~g  266 (459)
T PRK11776        214 DSTIEQRFYEVDPDERLPALQRLLLH---YRPESCVVFCNTKKECQEVADALNAQG  266 (459)
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHH---CCCCCEEEEECCHHHHHHHHHHHHHCC
T ss_conf             98637999997718789999999973---687660376174899999999998679