HHsearch alignment for GI: 254780601 and conserved domain: PRK11776
>PRK11776 ATP-dependent RNA helicase DbpA; Provisional.
Probab=97.02 E-value=0.0085 Score=38.00 Aligned_cols=52 Identities=10% Similarity=-0.070 Sum_probs=21.0
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHH-HHHHHHHHHHHH
Q ss_conf 7887338970588747899986030103788860256405999-999999999850
Q gi|254780601|r 310 LPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNM-QRRAERLFREAN 364 (573)
Q Consensus 310 i~~v~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e-~~~~~~i~~~~~ 364 (573)
T Consensus 214 ~~~I~q~~~~v~~~~K~~~L~~ll~~---~~~~~~IIFcntk~~v~~l~~~L~~~g 266 (459)
T PRK11776 214 DSTIEQRFYEVDPDERLPALQRLLLH---YRPESCVVFCNTKKECQEVADALNAQG 266 (459)
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHHH---CCCCCEEEEECCHHHHHHHHHHHHHCC
T ss_conf 98637999997718789999999973---687660376174899999999998679