HHsearch alignment for GI: 254780601 and conserved domain: PRK12898
>PRK12898 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.70 E-value=1.5e-13 Score=110.40 Aligned_cols=320 Identities=23% Similarity=0.266 Sum_probs=197.4
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 87987898999999999759969999289874689999999998610421225568827999849989999999999998
Q gi|254780601|r 18 RGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWL 97 (573)
Q Consensus 18 ~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l 97 (573)
T Consensus 115 lg~-r~ydvQliGg~~Lh~G~--IaEM~TGEGKTL~atlpaylnAL~G~---------gVHvvTvNDYLA~RDae~mg~i 182 (673)
T PRK12898 115 LGM-RHFPVQLMGGLALLEGW--LAEMQTGEGKTLTATLPAGTAALAGR---------PVHVITVNDYLAERDAEQMRPL 182 (673)
T ss_pred CCC-CCCHHHHHHHHHHHCCC--EEEEECCCCHHHHHHHHHHHHHHCCC---------CEEEEECCHHHHHHHHHHHHHH
T ss_conf 389-86468999899984584--35750788589999999999973699---------7089804557778769999999
Q ss_pred HHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-----HHHHHC---------------------CCCCCCCCEE
Q ss_conf 54469879999889987999996128975998223101-----332100---------------------0122464318
Q gi|254780601|r 98 YAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-----CDHIRG---------------------KGLNISHLKA 151 (573)
Q Consensus 98 ~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-----~d~~~~---------------------~~l~l~~v~~ 151 (573)
T Consensus 183 y~fLGLsvg~i~~~~~~~eRr~a--Y~~DItYgTn~E~GFDYLRDnm~~~~~~~~~~~~~~~l~~~~~~~~~~vqR~l~f 260 (673)
T PRK12898 183 YEALGVTVGCVIEDQDPEERRAA--YGADVTYCTNKELVFDYLRDRIALGQRAGDARLALESLRGGSERSGQLLLRGLHF 260 (673)
T ss_pred HHHHCCEEEEECCCCCHHHHHHH--HCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCE
T ss_conf 99829778451799997999997--2699579565233245776413023343211111011013346677751356753
Q ss_pred EEEECCCCCC-CC--------------H---HHHHHHHHHHHCCC---------CCCEEEEECCC--------------C
Q ss_conf 9996131100-10--------------0---12357888752143---------34225631111--------------2
Q gi|254780601|r 152 VVLDEADEML-DL--------------G---FRDDIEFILDSSPK---------KRRMLMFSATI--------------S 190 (573)
Q Consensus 152 lVlDEaD~ml-~~--------------g---f~~~i~~i~~~~p~---------~~q~~l~SAT~--------------~ 190 (573)
T Consensus 261 AIVDEvDSILIDEARTPLIISgp~~~~~~~~~y~~a~~~~~~L~~~~dY~iDek~k~v~LTe~G~~~ie~~l~~~~~~~~ 340 (673)
T PRK12898 261 AIVDEADSVLIDEARTPLIISAPAKEEDGAAVLRRALALAAELQEGEDYRIDAATKQIELTEAGRARIAALAESLPPAWR 340 (673)
T ss_pred EEEECHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECHHHHHHHHHHHCCCCCCCC
T ss_conf 78733033121024676101477777640899999999998567888779866888265786799999997241565565
Q ss_pred CC------CHH-HH-H-HHCCCCCC------------------------------------CCCCCCCCCCCCCCH-HC-
Q ss_conf 22------001-11-1-21012333------------------------------------323332325665200-00-
Q gi|254780601|r 191 PA------ITT-LA-K-NYQKDAVR------------------------------------VNIASENRQHSDIDY-RA- 223 (573)
Q Consensus 191 ~~------i~~-l~-~-~~~~~p~~------------------------------------i~~~~~~~~~~~i~~-~~- 223 (573)
T Consensus 341 ~~~~~~~~i~~ALrA~~lf~rDvdYIV~dgeVvIVDEfTGR~m~GRrwsdGLHQAIEAKEgV~I~~e~qTlAsIT~QnfF 420 (673)
T PRK12898 341 GAVRREELVRQALSALHLFRRDEHYIVRDGKVVIVDEFTGRVMPDRSWSDGLHQAIEAKEGVELTDPRETLARITFQRFF 420 (673)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 31148999999999999985798389978928998788885068880663789999985399878312356643499999
Q ss_pred ---------------------------------------------CCCCCCHHHHHHHHCC-CCC-CCCEEEEECCCHHH
Q ss_conf ---------------------------------------------0000000245542001-023-56416775130233
Q gi|254780601|r 224 ---------------------------------------------VLVALSDRDNAIVNIL-RYH-GAKNAIVFCSTRAS 256 (573)
Q Consensus 224 ---------------------------------------------~~v~~~~k~~~l~~ll-~~~-~~~~~ivF~~t~~~ 256 (573)
T Consensus 421 R~Y~kLsGMTGTA~tea~Ef~~iY~L~Vv~IPTnrP~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~GqPVLVGT~SVe~ 500 (673)
T PRK12898 421 RRYLRLAGMTGTAREVAGELWSVYGLPVVRIPTNRPSQRIVLPTEVFLTLAAKWAAVAARVRELHASGRPVLVGTRSVAA 500 (673)
T ss_pred HHCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 85617405777857579999997599769868999730123798585699999999999999998679988998375899
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC---CC-----CEEEEECCCCCHHHH
Q ss_conf 4565555542266630104899999999998665448814998538650014578---87-----338970588747899
Q gi|254780601|r 257 VSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLP---DL-----ELVIHAELSSNPENL 328 (573)
Q Consensus 257 ~~~l~~~L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~---~v-----~~Vin~d~P~~~~~y 328 (573)
T Consensus 501 SE~lS~~L~~~gi~h~VLNAk--~~~~EA~IIA~AG~~GaVTIATNMAGRGTDI~Lg~~V~~~GGLhVIgTerheSrRID 578 (673)
T PRK12898 501 SERLSALLREAGLPHQVLNAK--QDAEEAAIVARAGQRGRITVATNMAGRGTDIKLEPEVAARGGLHVILTERHESARID 578 (673)
T ss_pred HHHHHHHHHHCCCCHHHCCCC--CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCEEEECCCCCHHHHH
T ss_conf 999999999869975664786--668799999943999987970236789868476767886289889843755112456
Q ss_pred HHHHCCCCCCCCCCEEEEEECHHHH
Q ss_conf 9860301037888602564059999
Q gi|254780601|r 329 LHRSGRTGRAGRKGMSVFVIPQNMQ 353 (573)
Q Consensus 329 vHR~GRtgRag~~G~ai~l~~~~e~ 353 (573)
T Consensus 579 nQLrGRsGRQGDPGss~f~lSleDd 603 (673)
T PRK12898 579 RQLAGRCGRQGDPGSSEAILSLEDD 603 (673)
T ss_pred HHHHCCCCCCCCCCCEEEEEEECHH
T ss_conf 5642354468999851489981467