HHsearch alignment for GI: 254780601 and conserved domain: PRK12899
>PRK12899 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.57 E-value=1.3e-11 Score=97.33 Aligned_cols=128 Identities=19% Similarity=0.175 Sum_probs=96.8
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 87898999999999759969999289874689999999998610421225568827999849989999999999998544
Q gi|254780601|r 21 VNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAK 100 (573)
Q Consensus 21 ~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~l~~~ 100 (573)
T Consensus 93 mrhydVQliGgivLh~G~--IAEM~TGEGKTLvAtlpayLnAL~G---------kgVHVVTVNDYLA~RDaewMg~iy~f 161 (969)
T PRK12899 93 MVPYDVQILGAIAMHKGF--ITEMQTGEGKTLTAVMPLYLNALTG---------KPVHLVTVNDYLAQRDCEWVGSVLRW 161 (969)
T ss_pred CCCCCHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCCEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 776517999899982684--1355178848999999999986459---------97099726436568669999999998
Q ss_pred CCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHHCCCC-------CCCCCEEEEEECCCCCC
Q ss_conf 69879999889987999996128975998223101-332100012-------24643189996131100
Q gi|254780601|r 101 TGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIRGKGL-------NISHLKAVVLDEADEML 161 (573)
Q Consensus 101 ~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~~~~l-------~l~~v~~lVlDEaD~ml 161 (573)
T Consensus 162 LGLtVg~i~~~~~~~eRr~a--Y~~DItYgTn~E~GFDYLRDN~~a~~~~~~vqR~~~faIVDEvDSIL 228 (969)
T PRK12899 162 LGLTTGVLVSGSPLEKRKAI--YQCDVVYGTASEFGFDYLRDNSIATRKEEQVGRGFYFAIIDEVDSIL 228 (969)
T ss_pred HCCEEEEECCCCCHHHHHHH--HCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCEE
T ss_conf 09778563899898999998--66996787886667640137644268677517777446752331202