HHsearch alignment for GI: 254780601 and conserved domain: PRK12903

>PRK12903 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.65  E-value=5.3e-13  Score=106.63  Aligned_cols=320  Identities=19%  Similarity=0.215  Sum_probs=198.0

Q ss_pred             HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             78798789899999999975996999928987468999999999861042122556882799984998999999999999
Q gi|254780601|r   17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEW   96 (573)
Q Consensus        17 ~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~   96 (573)
T Consensus        74 ~lg~r-~ydvQl~gg~~l~~G~--iaEM~TGEGKTL~atlp~ylnal~g---------~gvhvvTvNdYLA~RDae~m~~  141 (885)
T PRK12903         74 VLGKR-PYDVQIIGGIILDLGS--VAEMKTGEGKTITSIAPVYLNALEG---------KGVIVSTVNEYLAERDAEEMGK  141 (885)
T ss_pred             HCCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCCEEEECCHHHHHHHHHHHHH
T ss_conf             61898-6378999899984595--1465068857999999999987469---------9808980645655855999999


Q ss_pred             HHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHHC------CCCCCCCCEEEEEECCCCCC-CC-----
Q ss_conf             854469879999889987999996128975998223101-332100------01224643189996131100-10-----
Q gi|254780601|r   97 LYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIRG------KGLNISHLKAVVLDEADEML-DL-----  163 (573)
Q Consensus        97 l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~~------~~l~l~~v~~lVlDEaD~ml-~~-----  163 (573)
T Consensus       142 ~y~~lGltvg~~~~~~~~~~r~~a--Y~~ditY~tn~e~gFDyLrDnm~~~~~~~vqr~~~~aIvDEvDSiLIDeArtPL  219 (885)
T PRK12903        142 VFKFLGLSVGINKANMDPNLKREA--YNCDITYSTHSELGFDYLRDNMVSSYEEKVQRGLNFCLIDEVDSILIDEARTPL  219 (885)
T ss_pred             HHHHHCCEEEECCCCCCHHHHHHH--HCCCCEEECCCCEEECCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCCCC
T ss_conf             999829656011899997999998--569967977865030114001135837725889980366541144330467752


Q ss_pred             ----------HHHHHHHHHHHHCC--------CCCCEEEEECCC-----------------CCCCHHH-----HHH-HCC
Q ss_conf             ----------01235788875214--------334225631111-----------------2220011-----112-101
Q gi|254780601|r  164 ----------GFRDDIEFILDSSP--------KKRRMLMFSATI-----------------SPAITTL-----AKN-YQK  202 (573)
Q Consensus       164 ----------gf~~~i~~i~~~~p--------~~~q~~l~SAT~-----------------~~~i~~l-----~~~-~~~  202 (573)
T Consensus       220 iisg~~~~~~~~y~~~~~~~~~l~~~dy~id~~~~~v~lte~G~~~~e~~~~~~~l~~~~~~~~~~~i~~al~A~~l~~~  299 (885)
T PRK12903        220 IISGGKSNESNLYKAADQFVRTLEEDDYKIDEESKAIYLTEKGIKKANKFFKLDNLYAIENSELFHRIQNALRAHKVFKE  299 (885)
T ss_pred             EEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             57678988646999999986533656688631447764251158999984266444661157999999999999999856


Q ss_pred             CCC------------------------------------CCCCCCCCCCCCCCCHH-CC---------------------
Q ss_conf             233------------------------------------33233323256652000-00---------------------
Q gi|254780601|r  203 DAV------------------------------------RVNIASENRQHSDIDYR-AV---------------------  224 (573)
Q Consensus       203 ~p~------------------------------------~i~~~~~~~~~~~i~~~-~~---------------------  224 (573)
T Consensus       300 d~dYiV~d~~v~ivDe~TGR~m~grr~s~GLhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~kl~GmTGTa~te~~Ef~  379 (885)
T PRK12903        300 GVEYIVRDGKIELVDQFTGRIMEGRSYSEGLQQAIQAKEMVEIEPETKTLATITYQNFFRLFKKLSGMTGTAKTEEQEFI  379 (885)
T ss_pred             CCCEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCCHHHHHHHH
T ss_conf             97079977928998789886278880303689999987288779887313663099898646042267677788999999


Q ss_pred             -------------------------CCCCCHHHHHHHHCC-CCC-CCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             -------------------------000000245542001-023-56416775130233456555554226663010489
Q gi|254780601|r  225 -------------------------LVALSDRDNAIVNIL-RYH-GAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGE  277 (573)
Q Consensus       225 -------------------------~v~~~~k~~~l~~ll-~~~-~~~~~ivF~~t~~~~~~l~~~L~~~g~~~~~lhg~  277 (573)
T Consensus       380 ~iY~l~v~~iPtn~p~~R~d~~d~vy~t~~~k~~av~~ei~~~~~~gqPvLvgt~sve~Se~ls~~L~~~~i~h~vLNAk  459 (885)
T PRK12903        380 DIYNMRVNVVPTNKPVIRKDEPDSIFGTKHAKWKAVVKEVKRVHEKGQPILIGTAQVEDSEQLHEYLLEANIPHTVLNAK  459 (885)
T ss_pred             HHHCCEEEECCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             98697369818999852142832310789999999999999998579988995684799999999998568770355468


Q ss_pred             CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC---CC-----CEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf             9999999998665448814998538650014578---87-----338970588747899986030103788860256405
Q gi|254780601|r  278 LSQQERSNALQMMRDGRARVCIATDVAARGIDLP---DL-----ELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIP  349 (573)
Q Consensus       278 ~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~---~v-----~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~  349 (573)
T Consensus       460 --~~~~EA~Iia~AG~~g~VTiATNMAGRGTDI~Lg~~v~~~GGL~VigterhesrRiD~QLrGR~gRQGDpG~s~f~~S  537 (885)
T PRK12903        460 --QHAREAEIIAKAGQKGAITIATNMAGRGTDIKLSKGVLELGGLYVLGTEKAESRRIDNQLRGRSGRQGDVGESRFFIS  537 (885)
T ss_pred             --CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEE
T ss_conf             --658899999954899918983766789968574165897298589842656204588886074346899973599997


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780601|r  350 QNM  352 (573)
Q Consensus       350 ~~e  352 (573)
T Consensus       538 leD  540 (885)
T PRK12903        538 LDD  540 (885)
T ss_pred             CCH
T ss_conf             264