HHsearch alignment for GI: 254780601 and conserved domain: PRK12906

>PRK12906 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.72  E-value=4.5e-14  Score=113.82  Aligned_cols=320  Identities=22%  Similarity=0.243  Sum_probs=198.6

Q ss_pred             HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             78798789899999999975996999928987468999999999861042122556882799984998999999999999
Q gi|254780601|r   17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEW   96 (573)
Q Consensus        17 ~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~   96 (573)
T Consensus        76 ~lg~-r~ydvQl~Gg~~L~~G~--iaEM~TGEGKTL~atlp~ylnaL~G---------kgvhvvTvNdYLA~RDae~m~~  143 (823)
T PRK12906         76 VLGL-YPFDVQIIGGIALHFGN--IAEMRTGEGKTLTATLPVYLNALEG---------KGVHVVTVNEYLAKRDATEMGE  143 (823)
T ss_pred             HCCC-CCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCEEEEECCHHHHHHHHHHHHH
T ss_conf             6389-76478999899983695--2565068858999999999986469---------9808980544655867999999


Q ss_pred             HHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHH------CCCCCCCCCEEEEEECCCCCC-CC-----
Q ss_conf             854469879999889987999996128975998223101-33210------001224643189996131100-10-----
Q gi|254780601|r   97 LYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIR------GKGLNISHLKAVVLDEADEML-DL-----  163 (573)
Q Consensus        97 l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~------~~~l~l~~v~~lVlDEaD~ml-~~-----  163 (573)
T Consensus       144 vy~~lGltvg~i~~~~~~~err~a--Y~~DItY~Tn~e~gFDYLRDnm~~~~~~~vqr~~~~aIvDEvDSiLIDEArtPL  221 (823)
T PRK12906        144 LYRWLGLTVGLNLNDMSPDEKREA--YNCDITYSTNSELGFDYLRDNMVVYKEQMVQRPLNYAIVDEVDSILIDEARTPL  221 (823)
T ss_pred             HHHHCCCEEEEECCCCCHHHHHHH--HCCCCEEECCCCEECCCCCCCCCCCHHHHCCCCCCEEEEECHHHHHHHCCCCCE
T ss_conf             999809667120899998999998--507844625655021113544126888834788855898541465432356762


Q ss_pred             ----------HHHHHHHHHHHHCC--------------------CCCCEEEEECCC--------------CCC--CHH--
Q ss_conf             ----------01235788875214--------------------334225631111--------------222--001--
Q gi|254780601|r  164 ----------GFRDDIEFILDSSP--------------------KKRRMLMFSATI--------------SPA--ITT--  195 (573)
Q Consensus       164 ----------gf~~~i~~i~~~~p--------------------~~~q~~l~SAT~--------------~~~--i~~--  195 (573)
T Consensus       222 IISg~~~~~~~~y~~~~~~v~~l~~~~~~~~~~~~~~~dy~id~~~~~v~lt~~G~~~~e~~~~~~~ly~~~~~~~~~~i  301 (823)
T PRK12906        222 IISGPAEGASDLYIRADRFVKTLTKDEDDDADDDEDHGDYKIDEPSKTVSLTEEGIEKAEKLLGLDNLYDPENQALVHHI  301 (823)
T ss_pred             EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             66257755535899999999999863431123347777758742546677517799998860488877883110599999


Q ss_pred             ---H-HHH-HCCCCCC------------------------------------CCCCCCCCCCCCCCH-HCC---------
Q ss_conf             ---1-112-1012333------------------------------------323332325665200-000---------
Q gi|254780601|r  196 ---L-AKN-YQKDAVR------------------------------------VNIASENRQHSDIDY-RAV---------  224 (573)
Q Consensus       196 ---l-~~~-~~~~p~~------------------------------------i~~~~~~~~~~~i~~-~~~---------  224 (573)
T Consensus       302 ~~aL~A~~lf~~d~dYiV~d~~V~ivDe~TGR~m~gRr~s~GLHQAiEaKE~v~i~~e~~tlA~IT~QnfFr~Y~kLsGM  381 (823)
T PRK12906        302 DQALRANYLMLKDKDYIVQNGEVLIVDEFTGRVMEGRRYSDGLHQAIEAKEGVEIQNENQTLATITYQNYFRLYKKLSGM  381 (823)
T ss_pred             HHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCHHHCCC
T ss_conf             99999999985798589988918998788888689992664679999987288778887303676699998646253167


Q ss_pred             -------------------------------------CCCCCHHHHHHHHCC-CCC-CCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             -------------------------------------000000245542001-023-56416775130233456555554
Q gi|254780601|r  225 -------------------------------------LVALSDRDNAIVNIL-RYH-GAKNAIVFCSTRASVSRFTKVLA  265 (573)
Q Consensus       225 -------------------------------------~v~~~~k~~~l~~ll-~~~-~~~~~ivF~~t~~~~~~l~~~L~  265 (573)
T Consensus       382 TGTA~te~~Ef~~iY~l~Vv~IPTn~P~~R~d~~d~iy~t~~~K~~Ai~~ei~~~~~~gqPvLvGT~SVe~SE~ls~~L~  461 (823)
T PRK12906        382 TGTAKTEEEEFREIYNMDVITIPTNRPVIRVDLPDLLYPTLDSKFNAVVDDIKERHAKGQPVLVGTVSIESSERLSQLLD  461 (823)
T ss_pred             CCCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
T ss_conf             67768789999998688618717999851150743464799999999999999998679988997175899999999999


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC--------------------------------C
Q ss_conf             22666301048999999999986654488149985386500145788--------------------------------7
Q gi|254780601|r  266 EHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPD--------------------------------L  313 (573)
Q Consensus       266 ~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi~~--------------------------------v  313 (573)
T Consensus       462 ~~gi~h~vLNAk--~~~~EA~IIa~AG~~GaVTIATNMAGRGTDI~LGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V  539 (823)
T PRK12906        462 KAGIPHAVLNAK--NHAKEAEIIAQAGQRGAVTIATNMAGRGTDIKLGGNPFEDIEAYQEAWIRELPKMKQRCEERRDKV  539 (823)
T ss_pred             HCCCCHHHHCCC--CHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             768703530687--757899999834899938970655689879630897302134332224667888888776556899


Q ss_pred             -----CEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHH
Q ss_conf             -----338970588747899986030103788860256405999
Q gi|254780601|r  314 -----ELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNM  352 (573)
Q Consensus       314 -----~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e  352 (573)
T Consensus       540 ~~~GGL~VIgTErheSrRIDnQLrGRaGRQGDPGss~F~lSLED  583 (823)
T PRK12906        540 RELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGSTRFYLSLED  583 (823)
T ss_pred             HHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCH
T ss_conf             97389379850444025678787232134799985237653346