HHsearch alignment for GI: 254780601 and conserved domain: PRK13104

>PRK13104 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.68  E-value=2.4e-13  Score=108.92  Aligned_cols=320  Identities=20%  Similarity=0.229  Sum_probs=193.4

Q ss_pred             HCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             78798789899999999975996999928987468999999999861042122556882799984998999999999999
Q gi|254780601|r   17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEW   96 (573)
Q Consensus        17 ~~g~~~pt~iQ~~~ip~~l~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~~   96 (573)
T Consensus        78 ~lg~-r~~dvQl~gg~~lh~g~--iaEM~TGEGKTL~atlp~ylnal~g---------~gvhvvTvNdYLA~RDae~m~~  145 (896)
T PRK13104         78 TLGL-RHFDVQLIGGMVLHEGN--IAEMRTGEGKTLVATLPAYLNAISG---------RGVHIVTVNDYLAKRDSQWMKP  145 (896)
T ss_pred             HCCC-CCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCC---------CCEEEECCCHHHHHHHHHHHHH
T ss_conf             6389-76479999899984585--1465178855999999999987559---------9719972653544644999999


Q ss_pred             HHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCH-HHHHHC------CCCCCCCCEEEEEECCCCCC-CC-----
Q ss_conf             854469879999889987999996128975998223101-332100------01224643189996131100-10-----
Q gi|254780601|r   97 LYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRL-CDHIRG------KGLNISHLKAVVLDEADEML-DL-----  163 (573)
Q Consensus        97 l~~~~~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl-~d~~~~------~~l~l~~v~~lVlDEaD~ml-~~-----  163 (573)
T Consensus       146 ~y~~lGltvg~i~~~~~~~~r~~a--Y~~DitY~Tn~e~gFDyLrDnm~~~~~~~vqr~~~~aivDEvDSiLiDEArtPL  223 (896)
T PRK13104        146 IYEFLGLTVGVIYPDMSHKEKQEA--YKADIVYGTNNEYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPL  223 (896)
T ss_pred             HHHHHCCEEEEECCCCCHHHHHHH--HCCCEEEECCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEECHHHHHHHCCCCCE
T ss_conf             999819767341899997999997--149937967865415235721113847625667764787422354321356874


Q ss_pred             ----------HHHHHHHHHHHHCC---------------CCCCEEEEECC-------CC--------------C------
Q ss_conf             ----------01235788875214---------------33422563111-------12--------------2------
Q gi|254780601|r  164 ----------GFRDDIEFILDSSP---------------KKRRMLMFSAT-------IS--------------P------  191 (573)
Q Consensus       164 ----------gf~~~i~~i~~~~p---------------~~~q~~l~SAT-------~~--------------~------  191 (573)
T Consensus       224 iisg~~~~~~~~y~~~~~~~~~l~~~~~~~~~~dy~~de~~~~v~lt~~G~~~~e~~l~~~~~~~~~~~ly~~~~~~~~~  303 (896)
T PRK13104        224 IISGAAEDSSELYIKINSLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIMLMH  303 (896)
T ss_pred             EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             75278876448999999999999862211677777987477645683546799999974521357766535513458998


Q ss_pred             CCH-HHH-H-HHCCCCCC------------------------------------CCCCCCCCCCCCCCH-HCC-------
Q ss_conf             200-111-1-21012333------------------------------------323332325665200-000-------
Q gi|254780601|r  192 AIT-TLA-K-NYQKDAVR------------------------------------VNIASENRQHSDIDY-RAV-------  224 (573)
Q Consensus       192 ~i~-~l~-~-~~~~~p~~------------------------------------i~~~~~~~~~~~i~~-~~~-------  224 (573)
T Consensus       304 ~v~~al~A~~l~~~d~~YiV~d~~v~ivDe~TGR~m~grr~s~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~kls  383 (896)
T PRK13104        304 HVNAALKAHAMFHRDIDYIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVPIQNENQTLASITFQNFFRMYNKLS  383 (896)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHC
T ss_conf             78899999999966984899889499986888877889816536899999872887788872247775999885450422


Q ss_pred             ---------------------------------------CCCCCHHHHHHHHCC-CCC-CCCEEEEECCCHHHHHHHHHH
Q ss_conf             ---------------------------------------000000245542001-023-564167751302334565555
Q gi|254780601|r  225 ---------------------------------------LVALSDRDNAIVNIL-RYH-GAKNAIVFCSTRASVSRFTKV  263 (573)
Q Consensus       225 ---------------------------------------~v~~~~k~~~l~~ll-~~~-~~~~~ivF~~t~~~~~~l~~~  263 (573)
T Consensus       384 GMTGTa~te~~Ef~~iY~l~Vv~IPtn~p~~R~d~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~sve~SE~ls~~  463 (896)
T PRK13104        384 GMTGTADTEAYEFQQIYNLEVVVIPTNRSMIRKDEADLVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQL  463 (896)
T ss_pred             CCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
T ss_conf             67567676899999986887698589999612379986972899999999999999997599789934857989999999


Q ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC---CCC---------------------------
Q ss_conf             54226663010489999999999866544881499853865001457---887---------------------------
Q gi|254780601|r  264 LAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDL---PDL---------------------------  313 (573)
Q Consensus       264 L~~~g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~TDvaaRGiDi---~~v---------------------------  313 (573)
T Consensus       464 L~~~gi~h~VLNAk--~~~~EA~Iia~AG~~gaVTIATNMAGRGTDI~LGg~~~~~~~~~~~~~~~~~~e~~~~~~~~~~  541 (896)
T PRK13104        464 LKKENIKHQVLNAK--FHEKEAQIIAEAGRPGAVTIATNMAGRGTDIVLGGSLAADLANLPADASEQEKEAVKKEWQKRH  541 (896)
T ss_pred             HHHCCCCHHHHCCC--CHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99869924652678--7478999998338999689716556888582178751244430565511667999999999853


Q ss_pred             --------CEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHH
Q ss_conf             --------338970588747899986030103788860256405999
Q gi|254780601|r  314 --------ELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNM  352 (573)
Q Consensus       314 --------~~Vin~d~P~~~~~yvHR~GRtgRag~~G~ai~l~~~~e  352 (573)
T Consensus       542 ~~v~~~GGL~VigterhesrRiD~QLrGRaGRQGDPG~s~F~lSleD  588 (896)
T PRK13104        542 DEVIAAGGLRIIGSERHESRRIDNQLRGRAGRQGDPGSSRFYLSLED  588 (896)
T ss_pred             HHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCH
T ss_conf             34420587289860433124677786053245689986326653337