HHsearch alignment for GI: 254780601 and conserved domain: PTZ00110

>PTZ00110 helicase; Provisional.
Probab=96.61  E-value=0.033  Score=34.06  Aligned_cols=71  Identities=17%  Similarity=0.260  Sum_probs=52.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHC----CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEC-----CCCCCC-CCCCCC
Q ss_conf             641677513023345655555422----6663010489999999999866544881499853-----865001-457887
Q gi|254780601|r  244 AKNAIVFCSTRASVSRFTKVLAEH----LFQVVALSGELSQQERSNALQMMRDGRARVCIAT-----DVAARG-IDLPDL  313 (573)
Q Consensus       244 ~~~~ivF~~t~~~~~~l~~~L~~~----g~~~~~lhg~~~q~~R~~~~~~fr~g~~~vLV~T-----DvaaRG-iDi~~v  313 (573)
T Consensus       255 gP~aLILaPTRELA~QI~~e~~~~~~~~~ir~~~i~GG~~~~~Q~~~L---~~G-~dIvVATPGRLiDlL~~~~~~L~~v  330 (602)
T PTZ00110        255 GPIVLVLAPTRELAEQIREQALQFGRSSKLKNSVAYGGVPKRFQTYAL---RRG-VEILIACPGRLIDFLESNVTNLRRV  330 (602)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH---CCC-CCEEEECCHHHHHHHHCCCCCCCCE
T ss_conf             976999738399999999999997154785499997996879999987---169-9999979238999996499874310


Q ss_pred             CEEEE
Q ss_conf             33897
Q gi|254780601|r  314 ELVIH  318 (573)
Q Consensus       314 ~~Vin  318 (573)
T Consensus       331 ~yLVL  335 (602)
T PTZ00110        331 TYLVL  335 (602)
T ss_pred             EEEEE
T ss_conf             28998