HHsearch alignment for GI: 254780601 and conserved domain: TIGR02928

>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..

Probab=97.45  E-value=0.00086  Score=44.70  Aligned_cols=114  Identities=22%  Similarity=0.261  Sum_probs=60.3

Q ss_pred             HHHHHHHHC-C---CCEEEECCCCCCHHHH--HHHHHHHHHHCCCCCCCCCCCC-EEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             999999975-9---9699992898746899--9999999861042122556882-7999849989999999999998544
Q gi|254780601|r   28 EAILNPDLR-E---KDVLVSAQTGSGKTVA--FGLALASTLLAENDRFSPASAP-LALAIAPTRELAVQVGRELEWLYAK  100 (573)
Q Consensus        28 ~~~ip~~l~-g---~d~i~~a~TGsGKT~a--f~lp~l~~l~~~~~~~~~~~~~-~~lil~PTrELa~Qv~~~~~~l~~~  100 (573)
T Consensus        30 ~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~------~d~~D~~~~~~NC~~~~T-~y~~~~~L~~~  102 (383)
T TIGR02928        30 AKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAED------RDVRDVSTVYINCQILDT-SYQVLVELANQ  102 (383)
T ss_pred             HHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHC------CCCCCEEEEEECCCCCCC-HHHHHHHHHHH
T ss_conf             99988750674898725887888987889999999999998622------699715899977854684-69999999998


Q ss_pred             C-----CCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHH
Q ss_conf             6-----9879999889987999996128975998223101332100012246431899961311001001235
Q gi|254780601|r  101 T-----GVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDD  168 (573)
Q Consensus       101 ~-----~~~v~~~~gg~~~~~q~~~l~~~~~iiv~TPgrl~d~~~~~~l~l~~v~~lVlDEaD~ml~~gf~~~  168 (573)
T Consensus       103 ln~~~~~~~v--P~tG~s~~~~~~~l--------------~~~l~~---~~~~~~~ivLDEiD~Lv-~~~~d~  155 (383)
T TIGR02928       103 LNRRGSGEEV--PTTGLSTSEVFREL--------------YKELNR---ERGDSLIIVLDEIDKLV-RKDDDD  155 (383)
T ss_pred             HCCCCCCCCC--CCCCCCHHHHHHHH--------------HHHHHH---HCCCEEEEEECCCCHHH-CCCCCC
T ss_conf             5157788889--88778789999999--------------999832---01887999862310221-588888