HHsearch alignment for GI: 254780601 and conserved domain: pfam03668
>pfam03668 ATP_bind_2 P-loop ATPase protein family. This family contains an ATP-binding site and could be an ATPase (personal obs:C Yeats).
Probab=92.98 E-value=0.71 Score=25.06 Aligned_cols=236 Identities=12% Similarity=0.086 Sum_probs=103.8
Q ss_pred EEEECCCCCCHHHHHH--------------HHHHHHHHCCCCCCCCCCCCEEEEEC-CCHHHHHHHHHHHHHHHH-HCCC
Q ss_conf 9999289874689999--------------99999861042122556882799984-998999999999999854-4698
Q gi|254780601|r 40 VLVSAQTGSGKTVAFG--------------LALASTLLAENDRFSPASAPLALAIA-PTRELAVQVGRELEWLYA-KTGV 103 (573)
Q Consensus 40 ~i~~a~TGsGKT~af~--------------lp~l~~l~~~~~~~~~~~~~~~lil~-PTrELa~Qv~~~~~~l~~-~~~~ 103 (573)
T Consensus 4 viVTGlSGAGKStAl~~LED~Gy~cvDNlP~~Ll~~~~~~~~~~~~~~~~lAi~iD~R~~~~~~~~~~~~~~l~~~~~~~ 83 (284)
T pfam03668 4 VIITGRSGAGKSVALRALEDLGYYCVDNLPPQLLPRLVDFLLAAGSRISSVAVVMDVRNRPFSGDLDEQRNELATRAITP 83 (284)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 99957997779999999981892477588999999999998624787652689996366533376999999998669982
Q ss_pred EEEEEECCCCHHHHH--HHHCCCCEEEEECCCCHHHHHHCC--CCC-CCCCEEEEEECCCCCCCC-HHHHHHHHHHHHCC
Q ss_conf 799998899879999--961289759982231013321000--122-464318999613110010-01235788875214
Q gi|254780601|r 104 VVAVCIGGVSVHRER--RDLQNGAHIVVGTPGRLCDHIRGK--GLN-ISHLKAVVLDEADEMLDL-GFRDDIEFILDSSP 177 (573)
Q Consensus 104 ~v~~~~gg~~~~~q~--~~l~~~~~iiv~TPgrl~d~~~~~--~l~-l~~v~~lVlDEaD~ml~~-gf~~~i~~i~~~~p 177 (573)
T Consensus 84 ~i--lFLdA~~~~LirRy~eTRR~HPL-~~~~~~leaI~~Er~~L~~lr~~Ad~vIDTS~--l~~~~Lr~~i~~~~~~~~ 158 (284)
T pfam03668 84 RI--LFLEADDDTLVRRYSDTRRSHPL-SGKQLSLEGIAAERRLLEPLRARADLIIDTST--LSVHGLRESIRRAFGGNG 158 (284)
T ss_pred EE--EEEECCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCEEEECCC--CCHHHHHHHHHHHHCCCC
T ss_conf 69--99978808999988873688998-88898699999999999999962659985689--999999999999864688
Q ss_pred CC-CCEEEEECCC----CCCCHH-HHHHHCCCCCCCCCCCCCCCC-CCCCHHCCCCCCC----HHHH-HHHHCCC----C
Q ss_conf 33-4225631111----222001-111210123333233323256-6520000000000----0245-5420010----2
Q gi|254780601|r 178 KK-RRMLMFSATI----SPAITT-LAKNYQKDAVRVNIASENRQH-SDIDYRAVLVALS----DRDN-AIVNILR----Y 241 (573)
Q Consensus 178 ~~-~q~~l~SAT~----~~~i~~-l~~~~~~~p~~i~~~~~~~~~-~~i~~~~~~v~~~----~k~~-~l~~ll~----~ 241 (573)
T Consensus 159 ~~~l~i~i~SFGfK~GiP~dAD~VfDvRfLpNP~y~~~LR~lTG~D~~V~~yv~~~~~~~~f~~~i~~ll~~~lp~y~~e 238 (284)
T pfam03668 159 GATLTVTVESFGFKYGIPIDADYVFDVRFLPNPHWDPELRPLTGLDKPVADYVLHHTEVAEFIESTRRLLSLWLPMYERE 238 (284)
T ss_pred CCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88669999961235779976644556135789988744456899985899999759109999999999999999989984
Q ss_pred CCCCEEEEE-C-----CCHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 356416775-1-----30233456555554226663010489999
Q gi|254780601|r 242 HGAKNAIVF-C-----STRASVSRFTKVLAEHLFQVVALSGELSQ 280 (573)
Q Consensus 242 ~~~~~~ivF-~-----~t~~~~~~l~~~L~~~g~~~~~lhg~~~q 280 (573)
T Consensus 239 gksyltIaiGCTGGqHRSV~iae~L~~~l~~~~~~v~v~HRdl~r 283 (284)
T pfam03668 239 GKSYLTIAIGCTGGKHRSVYIAEQLADYFRSDGKTVVALHRDLER 283 (284)
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf 998799997688986279999999999998479966486677888