HHsearch alignment for GI: 254780601 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=94.19 E-value=0.26 Score=28.05 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.2
Q ss_pred CCCEEEECCCCCCHHHH
Q ss_conf 99699992898746899
Q gi|254780601|r 37 EKDVLVSAQTGSGKTVA 53 (573)
Q Consensus 37 g~d~i~~a~TGsGKT~a 53 (573)
T Consensus 2 ~~~ill~G~~GsGKTtl 18 (148)
T smart00382 2 GEVILIVGPPGSGKTTL 18 (148)
T ss_pred CCEEEEECCCCHHHHHH
T ss_conf 97899999997029999