HHsearch alignment for GI: 254780601 and conserved domain: smart00488

Probab=98.59  E-value=4.7e-07  Score=66.63  Aligned_cols=75  Identities=20%  Similarity=0.140  Sum_probs=57.4

Q ss_pred             CCCCCHHHHHHHHHHH----CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             9878989999999997----599699992898746899999999986104212255688279998499899999999999
Q gi|254780601|r   20 YVNLTSVQEAILNPDL----REKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELE   95 (573)
Q Consensus        20 ~~~pt~iQ~~~ip~~l----~g~d~i~~a~TGsGKT~af~lp~l~~l~~~~~~~~~~~~~~~lil~PTrELa~Qv~~~~~   95 (573)
T Consensus         7 y-~py~~Q~e~m~~v~~~l~~~~~~llEaPTGtGKTlalL~~al~~~~~~~~~~---~~~ki~~~t~t~~~~~~~~~elr   82 (289)
T smart00488        7 Y-EPYPIQYEFMEELKRVLDRGKIGILESPTGTGKTLSLLCLTLTWLRSFPERI---QKIKLIYLSRTVSEIEKRLEELR   82 (289)
T ss_pred             C-CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHCC---CCCEEEEEECCHHHHHHHHHHHH
T ss_conf             9-9998999999999999974997999899965189999999999999670102---45616876153788999999998


Q ss_pred             HHH
Q ss_conf             985
Q gi|254780601|r   96 WLY   98 (573)
Q Consensus        96 ~l~   98 (573)
T Consensus        83 ~~~   85 (289)
T smart00488       83 KLM   85 (289)
T ss_pred             HHC
T ss_conf             632