RPSBLAST alignment for GI: 254780601 and conserved domain: PRK04537
>gnl|CDD|179861 PRK04537, PRK04537, ATP-dependent RNA helicase RhlB; Provisional. Length = 572
Score = 176 bits (448), Expect = 1e-44
Identities = 118/338 (34%), Positives = 191/338 (56%), Gaps = 16/338 (4%)
Query: 15 LSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASA 74
L G+ T +Q L L DV AQTG+GKT+AF +A+ + LL+ PA A
Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLSR-----PALA 78
Query: 75 ------PLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIV 128
P AL +APTRELA+Q+ ++ A G+ A+ GGV ++R LQ G ++
Sbjct: 79 DRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVI 138
Query: 129 VGTPGRLCDHIRG-KGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKK--RRMLMF 185
+ TPGRL D+++ K +++ + VLDEAD M DLGF DI F+L P++ R+ L+F
Sbjct: 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLF 198
Query: 186 SATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNIL-RYHGA 244
SAT+S + LA + + ++ + +E + + R A ++ ++ +L R GA
Sbjct: 199 SATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPADEEKQTLLLGLLSRSEGA 258
Query: 245 KNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVA 304
+ +VF +T+A V R + L H ++V LSG++ Q++R + L + G+ + +ATDVA
Sbjct: 259 RT-MVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVA 317
Query: 305 ARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKG 342
ARG+ + ++ V + +L + E+ +HR GRT R G +G
Sbjct: 318 ARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEG 355