RPSBLAST alignment for GI: 254780601 and conserved domain: PRK04537

>gnl|CDD|179861 PRK04537, PRK04537, ATP-dependent RNA helicase RhlB; Provisional. Length = 572
 Score =  176 bits (448), Expect = 1e-44
 Identities = 118/338 (34%), Positives = 191/338 (56%), Gaps = 16/338 (4%)

Query: 15  LSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASA 74
           L   G+   T +Q   L   L   DV   AQTG+GKT+AF +A+ + LL+      PA A
Sbjct: 24  LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLSR-----PALA 78

Query: 75  ------PLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIV 128
                 P AL +APTRELA+Q+ ++     A  G+  A+  GGV   ++R  LQ G  ++
Sbjct: 79  DRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVI 138

Query: 129 VGTPGRLCDHIRG-KGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKK--RRMLMF 185
           + TPGRL D+++  K +++   +  VLDEAD M DLGF  DI F+L   P++  R+ L+F
Sbjct: 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPERGTRQTLLF 198

Query: 186 SATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNIL-RYHGA 244
           SAT+S  +  LA  +  +  ++ + +E    + +  R    A  ++   ++ +L R  GA
Sbjct: 199 SATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIYFPADEEKQTLLLGLLSRSEGA 258

Query: 245 KNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVA 304
           +  +VF +T+A V R  + L  H ++V  LSG++ Q++R + L   + G+  + +ATDVA
Sbjct: 259 RT-MVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVA 317

Query: 305 ARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKG 342
           ARG+ +  ++ V + +L  + E+ +HR GRT R G +G
Sbjct: 318 ARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEG 355