RPSBLAST alignment for GI: 254780601 and conserved domain: PRK11192

>gnl|CDD|183029 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional. Length = 434
 Score =  213 bits (545), Expect = 8e-56
 Identities = 125/343 (36%), Positives = 179/343 (52%), Gaps = 20/343 (5%)

Query: 13  EALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPA 72
           EAL ++GY   T++Q   + P L  +DVL SA TG+GKT AF L     LL    R S  
Sbjct: 14  EALQDKGYTRPTAIQAEAIPPALDGRDVLGSAPTGTGKTAAFLLPALQHLLDFPRRKS-- 71

Query: 73  SAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTP 132
             P  L + PTRELA+QV  +   L   T + +A   GGV+             IVV TP
Sbjct: 72  GPPRILILTPTRELAMQVADQARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATP 131

Query: 133 GRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSATI-SP 191
           GRL  +I+ +  +   ++ ++LDEAD MLD+GF  DIE I   +  +++ L+FSAT+   
Sbjct: 132 GRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRWRKQTLLFSATLEGD 191

Query: 192 AITTLAKNYQKDAVRVNIASENRQHSDID---YRAVLVALSDRDNA------IVNILRYH 242
           A+   A+    D V V      R+   I    YRA        D+       + ++L+  
Sbjct: 192 AVQDFAERLLNDPVEVEAEPSRRERKKIHQWYYRA--------DDLEHKTALLCHLLKQP 243

Query: 243 GAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATD 302
               +IVF  TR  V      L +       L GE+ Q +R+ A++ + DGR  V +ATD
Sbjct: 244 EVTRSIVFVRTRERVHELAGWLRKAGINCCYLEGEMVQAKRNEAIKRLTDGRVNVLVATD 303

Query: 303 VAARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSV 345
           VAARGID+ D+  VI+ ++  + +  LHR GRTGRAGRKG ++
Sbjct: 304 VAARGIDIDDVSHVINFDMPRSADTYLHRIGRTGRAGRKGTAI 346