>gnl|CDD|28960 cd00079, HELICc, Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may not be an autonomously folding unit, but an integral part of the helicase; 4 helicase superfamilies at present according to the organization of their signature motifs; all helicases share the ability to unwind nucleic acid duplexes with a distinct directional polarity; they utilize the free energy from nucleoside triphosphate hydrolysis to fuel their translocation along DNA, unwinding the duplex in the process. Length = 131

 Score =  104 bits (261), Expect = 7e-23
 Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 3/132 (2%)

Query: 218 DIDYRAVLVALSDRDNAIVNILRYHGAKN--AIVFCSTRASVSRFTKVLAEHLFQVVALS 275
            I    VL    ++  A++ +L+ H  K    ++FC ++  +    ++L +   +V AL 
Sbjct: 1   PIKQY-VLPVEDEKLEALLELLKEHLKKGGKVLIFCPSKKMLDELAELLRKPGIKVAALH 59

Query: 276 GELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRT 335
           G+ SQ+ER   L+  R+G   V +ATDV ARGIDLP++ +VI+ +L  +P + L R GR 
Sbjct: 60  GDGSQEEREEVLKDFREGEIVVLVATDVIARGIDLPNVSVVINYDLPWSPSSYLQRIGRA 119

Query: 336 GRAGRKGMSVFV 347
           GRAG+KG ++ +
Sbjct: 120 GRAGQKGTAILL 131