RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0326
>gnl|CDD|35547 KOG0326, KOG0326, KOG0326, ATP-dependent RNA helicase [RNA processing and modification]. Length = 459
Score = 165 bits (420), Expect = 2e-41
Identities = 91/332 (27%), Positives = 167/332 (50%), Gaps = 7/332 (2%)
Query: 17 ERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFSPASAPL 76
E+G+ + +QE + L +D+L A+ G+GKT A+ + + + + +
Sbjct: 102 EKGFEKPSPIQEESIPIALTGRDILARAKNGTGKTAAYCIPVLEKIDPKKNVIQ------ 155
Query: 77 ALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVGTPGRLC 136
A+ + PTRELA+Q + + L G+ V V GG S+ + L H+VVGTPGR+
Sbjct: 156 AIILVPTRELALQTSQVCKELSKHLGIKVMVTTGGTSLRDDIMRLNQTVHLVVGTPGRIL 215
Query: 137 DHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSATISPAITTL 196
D + ++S +V+DEAD++L + F+ +E ++ PK+R++L++SAT +
Sbjct: 216 DLAKKGVADLSDCVILVMDEADKLLSVDFQPIVEKLISFLPKERQILLYSATFPLTVKGF 275
Query: 197 AKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAKNAIVFCSTRAS 256
+ K +N+ E Y A V + + + + +I+FC++
Sbjct: 276 MDRHLKKPYEINLMEELTLKGVTQYYA-FVEERQKVHCLNTLFSKLQINQSIIFCNSTNR 334
Query: 257 VSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELV 316
V K + E + + +++Q+ R+ R+G+ R + TD+ RGID+ + +V
Sbjct: 335 VELLAKKITELGYSCYYIHAKMAQEHRNRVFHDFRNGKCRNLVCTDLFTRGIDIQAVNVV 394
Query: 317 IHAELSSNPENLLHRSGRTGRAGRKGMSVFVI 348
I+ + N E LHR GR+GR G G+++ +I
Sbjct: 395 INFDFPKNAETYLHRIGRSGRFGHLGLAINLI 426