RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0330

>gnl|CDD|35551 KOG0330, KOG0330, KOG0330, ATP-dependent RNA helicase [RNA processing and modification]. Length = 476
 Score =  247 bits (632), Expect = 5e-66
 Identities = 117/345 (33%), Positives = 197/345 (57%), Gaps = 8/345 (2%)

Query: 7   IPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAEN 66
            P+++ EA  E G+   T +Q   +   L  +DV+  A+TGSGKT AF L +   LL E 
Sbjct: 69  HPELL-EACQELGWKKPTKIQSEAIPVALGGRDVIGLAETGSGKTGAFALPILQRLLQEP 127

Query: 67  DRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAH 126
                     AL + PTRELA Q+  + E L +  G+ VAV +GG+ +  +   L    H
Sbjct: 128 ------KLFFALVLTPTRELAQQIAEQFEALGSGIGLRVAVLVGGMDMMLQANQLSKKPH 181

Query: 127 IVVGTPGRLCDHIRG-KGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMF 185
           I+V TPGRL DH+   KG ++  LK +VLDEAD +LD+ F +++++IL   P++R+  +F
Sbjct: 182 ILVATPGRLWDHLENTKGFSLEQLKFLVLDEADRLLDMDFEEELDYILKVIPRERQTFLF 241

Query: 186 SATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAK 245
           SAT++  +  L +    + V+V ++S+ +    +    + V   D+D  +V +L      
Sbjct: 242 SATMTKKVRKLQRASLDNPVKVAVSSKYQTVDHLKQTYLFVPGKDKDTYLVYLLNELAGN 301

Query: 246 NAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDVAA 305
           + IVFC+T  +      +L    FQ + L G++SQ +R  AL   + G   + + TDVA+
Sbjct: 302 SVIVFCNTCNTTRFLALLLRNLGFQAIPLHGQMSQSKRLGALNKFKAGARSILVCTDVAS 361

Query: 306 RGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQ 350
           RG+D+P +++V++ ++ ++ ++ +HR GRT RAGR G ++ ++ Q
Sbjct: 362 RGLDIPHVDVVVNYDIPTHSKDYIHRVGRTARAGRSGKAITLVTQ 406