RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0332
>gnl|CDD|35553 KOG0332, KOG0332, KOG0332, ATP-dependent RNA helicase [RNA processing and modification]. Length = 477
Score = 172 bits (437), Expect = 2e-43
Identities = 106/359 (29%), Positives = 183/359 (50%), Gaps = 26/359 (7%)
Query: 2 KIFENI---PQVIGEALSERGYVNLTSVQEAILNPDLRE--KDVLVSAQTGSGKTVAFGL 56
K FE + P+++ + L + + +QE L L E ++++ +Q+G+GKT AF L
Sbjct: 90 KSFEELRLKPELL-KGLYAMKFQKPSKIQETALPLLLAEPPQNLIAQSQSGTGKTAAFVL 148
Query: 57 ALASTLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHR 116
+ S + + P + +APTRELA Q G +E + T + + I G R
Sbjct: 149 TMLSRVDPDV------VVPQCICLAPTRELAPQTGEVVEEMGKFTELTASYAIRGSKAKR 202
Query: 117 ERRDLQNGAHIVVGTPGRLCDHI-RGKGLNISHLKAVVLDEADEMLDL-GFRDDIEFILD 174
+ IV+GTPG + D + + K +++ +K VLDEAD M+D GF+D I+
Sbjct: 203 GN---KLTEQIVIGTPGTVLDLMLKLKCIDLEKIKVFVLDEADVMIDTQGFQDQSIRIMR 259
Query: 175 SSPKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRD-- 232
S P+ +++L+FSAT + A +A + + E D + ++ D
Sbjct: 260 SLPRNQQLLLFSATFVEKVAAFALKIVPNANVIILKREE-LALDNIKQLYVLCACRDDKY 318
Query: 233 NAIVNILRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRD 292
A+VN+ +I+FC T+A+ + + QV L G+L+ ++R+ + R+
Sbjct: 319 QALVNLYGLLTIGQSIIFCHTKATAMWLYEEMRAEGHQVSLLHGDLTVEQRAAIIDRFRE 378
Query: 293 GRARVCIATDVAARGIDLPDLELVIHAEL------SSNPENLLHRSGRTGRAGRKGMSV 345
G+ +V I T+V ARGID+ + +V++ +L + E LHR GRTGR G+KG+++
Sbjct: 379 GKEKVLITTNVCARGIDVAQVSVVVNYDLPVKYTGEPDYETYLHRIGRTGRFGKKGLAI 437