RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0333

>gnl|CDD|35554 KOG0333, KOG0333, KOG0333, U5 snRNP-like RNA helicase subunit [RNA processing and modification]. Length = 673
 Score =  206 bits (525), Expect = 1e-53
 Identities = 121/375 (32%), Positives = 194/375 (51%), Gaps = 29/375 (7%)

Query: 6   NIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLAL---ASTL 62
             P  +   + + GY   T +Q   +   L+ +D +  A+TGSGKT AF + L    S+L
Sbjct: 251 GFPLELLSVIKKPGYKEPTPIQRQAIPLGLQNRDPIGVAETGSGKTAAFLIPLLIWISSL 310

Query: 63  LAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQ 122
                  +    P A+ +APTRELA Q+  E        G+     IGG+S   +   L 
Sbjct: 311 PPMARLENNIEGPYAIILAPTRELAQQIEEETNKFGKPLGIRTVSVIGGLSFEEQGFQLS 370

Query: 123 NGAHIVVGTPGRLCDHIRGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSP----- 177
            G  IV+ TPGRL D +  + L ++    VVLDEAD M+D+GF  D++ IL+  P     
Sbjct: 371 MGCEIVIATPGRLIDSLENRYLVLNQCTYVVLDEADRMIDMGFEPDVQKILEQMPSSNAK 430

Query: 178 --------------------KKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHS 217
                               K R+ +MF+AT+ PA+  LA++Y +  V V I S  +   
Sbjct: 431 PDTDEKEGEERVRKNFSSSKKYRQTVMFTATMPPAVERLARSYLRRPVVVTIGSAGKPTP 490

Query: 218 DIDYRAVLVALSDRDNAIVNILRYHGAKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGE 277
            ++ +  +V+  ++   ++ IL  +     I+F +T+       K+L +  ++V  L G 
Sbjct: 491 RVEQKVEMVSEDEKRKKLIEILESNFDPPIIIFVNTKKGADALAKILEKAGYKVTTLHGG 550

Query: 278 LSQQERSNALQMMRDGRARVCIATDVAARGIDLPDLELVIHAELSSNPENLLHRSGRTGR 337
            SQ++R NAL   R+G   + +ATDVA RGID+P++ LVI+ +++ + E+  HR GRTGR
Sbjct: 551 KSQEQRENALADFREGTGDILVATDVAGRGIDIPNVSLVINYDMAKSIEDYTHRIGRTGR 610

Query: 338 AGRKGMSV-FVIPQN 351
           AG+ G ++ F+ P +
Sbjct: 611 AGKSGTAISFLTPAD 625